Response of Horticultural Soil Microbiota to Different Fertilization Practices

Environmentally friendly agricultural production necessitates manipulation of microbe-plant interactions, requiring a better understanding of how farming practices influence soil microbiota. We studied the effect of conventional and organic treatment on soil bacterial richness, composition, and predicted functional potential. 16S rRNA sequencing was applied to soils from adjacent plots receiving either a synthetic or organic fertilizer, where two crops were grown within treatment, homogenizing for differences in soil properties, crop, and climate. Conventional fertilizer was associated with a decrease in soil pH, an accumulation of Ag, Mn, As, Fe, Co, Cd, and Ni; and an enrichment of ammonia oxidizers and xenobiotic compound degraders (e.g., Candidatus Nitrososphaera, Nitrospira, Bacillus, Pseudomonas). Soils receiving organic fertilization were enriched in Ti (crop biostimulant), N, and C cycling bacteria (denitrifiers, e.g., Azoarcus, Anaerolinea; methylotrophs, e.g., Methylocaldum, Methanosarcina), and disease-suppression (e.g., Myxococcales). Some predicted functions, such as glutathione metabolism, were slightly, but significantly enriched after a one-time manure application, suggesting the enhancement of sulfur regulation, nitrogen-fixing, and defense of environmental stressors. The study highlights that even a single application of organic fertilization is enough to originate a rapid shift in soil prokaryotes, responding to the differential substrate availability by promoting soil health, similar to recurrent applications.

Long term monitoring of metal pollution in sediments as a tool to investigate the effects of engineering works in estuaries. A case study, the Nerbioi-Ibaizabal estuary (Bilbao, Basque Country)

The Nerbioi-Ibaizabal estuary (Bilbao, Basque Country) suffered an important input of contaminants, including metals and metalloids, between 1875 and 1975. We collected sediments in the tidal part of the river in January 2018 and measured the concentrations of 27 elements in them. At that time, two important construction works were taking place in the area: the extension of the commercial port and the opening of long semi-closed channel. Comparing the current metallic hotspots with the geographical distribution of elements in previous years (2009, 2010 and 2014) showed us that these works seem to have significantly influenced the distribution of toxic elements in the estuary, even if the critical point of the second one is still to arrive with the inundation of the connection to the mainland. Long term pollution monitoring reveals as a powerful tool to check the effects of ongoing engineering works in estuarine environments.

Accumulation and Translocation of Essential and Nonessential Elements by Tomato Plants (Solanum lycopersicum) Cultivated in Open-Air Plots under Organic or Conventional Farming Techniques

A 5-month experiment was performed to study the accumulation of several inorganic elements in tomato plants cultivated using organic or synthetic fertilizer. Plants were harvested in triplicate at six sampling dates during their life cycle. Statistical and chemometric analysis of data indicated the sequestration of toxic elements and of Na, Zn, Fe, and Co in roots, while the rest of the elements, including Cd, were mainly translocated to aboveground organs. A general decreasing trend in element concentrations with time was observed for most of them. A negative correlation between some element concentrations and ripening stage of fruits was identified. Conventionally grown plants seemed to accumulate more Cd and Tl in their tissues, while organic ones were richer in some nutrients. However, there was no clear effect of the fertilizer used (organic vs synthetic) on the elemental composition of fruits.

Sample pretreatment to differentiate between bioconcentration and atmospheric deposition of polycyclic aromatic hydrocarbons in mosses

In this first approach a comparison using different sample pretreatment methodologies has been made to differentiate between total atmospheric deposition and bioconcentration of polycyclic aromatic hydrocarbons (PAHs) in moss samples (Brachythecium rutabulum). Samples were collected in a densely polluted urban area in Barakaldo (Biscay, Basque Country) and submitted to different cleaning procedures with the aim to remove as many deposited atmospheric particles as possible. Analysis by means of Scanning Electron Microscopy coupled to Energy Dispersive Spectroscopy (SEM-EDS) allowed to quantify the removal efficiency of each cleaning procedure and to chemically characterise particles still present in the pre-cleaned sample. Cleaning moss samples twice with deionised water in an ultrasound bath showed up as the most suitable way to remove solid particles deposited on their surface. Discerning between bioconcentration and atmospheric deposition is therefore possible after GC-MS quantitative analysis of non-washed and washed moss samples.