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Drop-on-powder 3D printing of amorphous high dose oral dosage forms: Process development, opportunities and printing limitations. Int J Pharm X 2022; 5:100151. [PMID: 36687376 PMCID: PMC9850179 DOI: 10.1016/j.ijpx.2022.100151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Revised: 12/21/2022] [Accepted: 12/22/2022] [Indexed: 12/24/2022] Open
Abstract
Drop-on-powder 3D printing is able to produce highly drug loaded solid oral dosage forms. However, this technique is mainly limited to well soluble drugs. The majority of pipeline compounds is poorly soluble, though, and requires solubility enhancement, e.g., via formation of amorphous solid dispersions. This study presents a detailed and systematic development approach for the production of tablets containing high amounts of a poorly soluble, amorphized drug via drop-on-powder 3D printing (also known as binder jetting). Amorphization of the compound was achieved via hot-melt extrusion using the exemplary system of the model compound ketoconazole and copovidone as matrix polymer at drug loadings of 20% and 40%. The milled extrudate was used as powder for printing and the influence of inks and different ink-to-powder ratios on recrystallization of ketoconazole was investigated in a material-saving small-scale screening. Crystallinity assessment was performed using differential scanning calorimetry and polarized light microscopy to identify even small traces of crystallinity. Printing of tablets showed that the performed small-scale screening was capable to identify printing parameters for the development of amorphous and mechanically stable tablets via drop-on-powder printing. A stability study demonstrated physically stable tablets over twelve weeks at accelerated storage conditions.
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Key Words
- 3D Printing
- 3D, three-dimensional
- 3DP, three-dimensional printing
- AM, additive manufacturing
- API, active pharmaceutical ingredient
- ASD, amorphous solid dispersion
- Additive manufacturing
- Amorphous solid dispersion
- BCS, Biopharmaceutics Classification System
- Binder jetting
- DSC, differential scanning calorimetry
- DoP, drop-on-powder
- Drop-on-powder printing
- FDA, U.S. Food and Drug Administration
- FDM, fused deposition modeling
- HME, hot-melt extrusion
- KTZ, ketoconazole
- Process development
- SODF, solid oral dosage form
- Solubility enhancement
- dpmm, dots per millimeter
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Estimating thermodynamic equilibrium solubility and solute-solvent interactions of niclosamide in eight mono-solvents at different temperatures. J Mol Liq 2022; 367:120359. [PMID: 36128020 PMCID: PMC9477609 DOI: 10.1016/j.molliq.2022.120359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2022] [Revised: 08/06/2022] [Accepted: 09/10/2022] [Indexed: 12/05/2022]
Abstract
Niclosamide is an FDA-approved oral anthelmintic drug currently being repurposed for COVID-19 infection. Its interesting applicability in multiple therapeutic indications has sparked interest in this drug/ scaffold. Despite its therapeutic use for several years, its detailed solubility information from Chemistry Manufacturing & Controls perspective is unavailable. Thus, the present study is intended to determine the mole fraction solubility of niclosamide in commonly used solvents and cosolvents at a temperature range of 298.15–323.15 K. The polymorphic changes from crystalline to monohydrate forms post-equilibration in various solvents were observed. The maximum mole fraction solubility of niclosamide at 323.15 K is 1.103 × 10-3 in PEG400, followed by PEG200 (5.272 × 10-4), 1-butanol (3.047 × 10-4), 2-propanol (2.42 × 10-4), ethanol (1.66 × 10-4), DMSO (1.52 × 10-4), methanol (7.78 × 10-5) and water (3.27 × 10-7). The molecular electrostatic potential showed a linear correlation with the solubility. PEG400 has higher electrostatic potential, and H-bond acceptor count, which forms a hydrogen bond with phenolic –OH of niclosamide and thus enhances its solubility. This data is valuable for the drug discovery and development teams working on the medicinal chemistry and process chemistry of this scaffold.
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Key Words
- ATChI, acetyl thiocholine iodide
- Chemistry manufacturing & controls
- DMSO, dimethyl sulfoxide
- DSC, differential scanning calorimetry
- DTNB, 5,5′-dithio-bis-[2-nitrobenzoic acid
- Drug discovery and lead optimization
- EeAChE, Electric eel acetylcholinesterase
- FDA, Food and Drug Administration
- IUPAC, International Union of Pure and Applied Chemistry
- Mole fraction solubility
- Niclosamide
- PEG200, propylene glycol 200
- PEG400, propylene glycol 400
- Process chemistry
- Thermodynamic solubility
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Intranasal temperature-sensitive hydrogels of cannabidiol inclusion complex for the treatment of post-traumatic stress disorder. Acta Pharm Sin B 2021; 11:2031-2047. [PMID: 34386336 PMCID: PMC8343172 DOI: 10.1016/j.apsb.2021.01.014] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Revised: 12/15/2020] [Accepted: 01/06/2021] [Indexed: 11/26/2022] Open
Abstract
Post-traumatic stress disorder (PTSD) is a psychiatric disease that seriously affects brain function. Currently, selective serotonin reuptake inhibitors (SSRIs) are used to treat PTSD clinically but have decreased efficiency and increased side effects. In this study, nasal cannabidiol inclusion complex temperature-sensitive hydrogels (CBD TSGs) were prepared and evaluated to treat PTSD. Mice model of PTSD was established with conditional fear box. CBD TSGs could significantly improve the spontaneous behavior, exploratory spirit and alleviate tension in open field box, relieve anxiety and tension in elevated plus maze, and reduce the freezing time. Hematoxylin and eosin and c-FOS immunohistochemistry slides showed that the main injured brain areas in PTSD were the prefrontal cortex, amygdala, and hippocampus CA1. CBD TSGs could reduce the level of tumor necrosis factor-α caused by PTSD. Western blot analysis showed that CBD TSGs increased the expression of the 5-HT1A receptor. Intranasal administration of CBD TSGs was more efficient and had more obvious brain targeting effects than oral administration, as evidenced by the pharmacokinetics and brain tissue distribution of CBD TSGs. Overall, nasal CBD TSGs are safe and effective and have controlled release. There are a novel promising option for the clinical treatment of PTSD.
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Key Words
- AUC, area under the curve
- BBB, blood‒brain barrier
- Blood‒brain barrier
- Brain targeting
- CBD TSGs, cannabidiol inclusion complex temperature-sensitive hydrogels
- CNS, central nervous system
- COVID-19, coronavirus disease 2019
- Cannabidiol
- DSC, differential scanning calorimetry
- HP-β-CD, hydroxypropyl-β-cyclodextrin
- Hydrogels
- Hydroxypropyl-β-cyclodextrin
- IR, infrared
- IS, internal standard
- Inclusion complex
- Intranasal administration
- MRM, multiple reaction monitoring
- PPV, percentage of persistent vibration
- PTSD, post-traumatic stress disorder
- PVD, persistent vibration duration
- Post-traumatic stress disorder
- SSRIs, selective serotonin reuptake inhibitors
- TNF-α, tumor necrosis factor-α
- WB, Western blot
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Influence of high pressure compaction on solubility and intrinsic dissolution of ibuprofen binary mixtures employing standard excipients. INTERNATIONAL JOURNAL OF PHARMACEUTICS-X 2021; 3:100075. [PMID: 33851132 PMCID: PMC8022821 DOI: 10.1016/j.ijpx.2021.100075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Accepted: 03/11/2021] [Indexed: 11/14/2022]
Abstract
Enabling formulations often depend on functional excipients. However, the question remains whether excipients regarded as standard establish similar interactions and subsequently improvement of solubility when employed at unusual manufacturing process conditions. In this study, compaction of API under high pressure in the presence of hydrophilic excipients is proposed as a technique to improve the solubility and/or dissolution rate with an acceptable preservation of the supersaturation state. Binary mixtures of ibuprofen (IBU) with hydroxypropyl cellulose, isomalt, mannitol and sorbitol were compacted applying high pressure (500 MPa) with and without a previous co-milling step. Intrinsic dissolution rate (IDR) was selected to characterize and evaluate dissolution performance. The IDR of neat IBU increased from 5 to 88 fold and the aqueous solubility in the range of 3 to 54%. Regarding the polyols isomalt showed the highest impact on solubility and dissolution, without changing the crystallinity of IBU independent of a co-milling step. Even higher impact was achieved in combination with HPC. However, only without a previous co-milling step, ibuprofen remained crystalline, while co-milling induced an amorphous IBU-content of 38%. Based on XRPD and DSC findings, higher IDR and solubility values correlated with crystal modifications as well as IBU/excipient interactions.
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Key Words
- API, active pharmaceutical ingredient
- ASD, amorphous solid dispersion
- BCS, biopharmaceutics classification system
- COM, co-milled
- Crystal modification
- Cs, aqueous solubility
- DSC, differential scanning calorimetry
- Drug/excipient interactions
- Gr, granules
- HCL, hydrochloric acid
- HPC, hydroxypropylcellulose
- HPC-SSL, super special-low viscosity hydroxypropylcellulose
- High-pressure compaction
- Hydrophilic excipients
- IBU, ibuprofen
- IDR, intrinsic dissolution rate
- ISO, isomalt
- Intrinsic dissolution
- MANN, mannitol
- MIX, mixtures
- MUPS, multiple unit pellet system
- PM, physical mixtures
- SFE, surface free energy
- SORB, sorbitol
- ST, standard
- Solubility enhancement
- Tab, tablets
- Tg, glass transition temperature
- Tm, melting point
- XRPD, X-ray powder diffraction
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In vitro and in vivo assessment of hydroxypropyl cellulose as functional additive for enabling formulations containing itraconazole. INTERNATIONAL JOURNAL OF PHARMACEUTICS-X 2021; 3:100076. [PMID: 33851133 PMCID: PMC8024662 DOI: 10.1016/j.ijpx.2021.100076] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Accepted: 03/12/2021] [Indexed: 11/26/2022]
Abstract
Using polymers as additives to formulate ternary amorphous solid dispersions (ASDs) has successfully been established to increase the bioavailability of poorly soluble drugs, when one polymer is not able to provide both, stabilizing the drug in the matrix and the supersaturated solution. Therefore, we investigated the influence of low-viscosity hydroxypropyl cellulose (HPC) polymers as an additive in HPMC based ternary ASD formulations made by hot-melt extrusion (HME) on the bioavailability of itraconazole (ITZ). The partitioning potential of the different HPC grades was screened in biphasic supersaturation assays. Solid-state analytics were performed using differential scanning calorimetry (DSC), X-ray powder diffraction (XRPD). The addition of HPCs, especially HPC-UL, resulted in a superior partitioned amount of ITZ in biphasic supersaturation assays. Moreover, the approach in using HPCs as an additive in HPMC based ASDs led to an increase in partitioned ITZ compared to Sporanox® in biorelevant biphasic dissolution studies. The results from the biphasic dissolution experiments correlated well with the in vivo studies, which revealed the highest oral bioavailability for the ternary ASD comprising HPC-UL and HPMC. Increased partitioning rate of itraconazole using low-viscosity HPC polymers. Enhanced bioavailability of itraconazole using HPC-UL as functional additive. Ternary amorphous solid dispersion with higher performance than Sporanox®.
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Key Words
- API, active pharmaceutical ingredient
- ASD, amorphous solid dispersion
- AUC, area under the curve
- AcN, acetonitrile
- Amorphous solid dispersion
- BCS, biopharmaceutical classification system
- Biphasic dissolution
- DMSO, dimethyl sulfoxide
- DSC, differential scanning calorimetry
- FaSSIF, fasted state simulated intestinal fluid
- GI, gastrointestinal
- HME, hot-melt extrusion
- HPC
- HPC, hydroxypropyl cellulose
- HPMC
- HPMC, hydroxypropyl methyl cellulose
- Hot-melt extrusion
- ITZ, itraconazole
- KTZ, ketoconazole
- NCE, new chemical entity
- OH-ITZ, hydroxy-itraconazole
- PM, physical mixture
- SD, spray-drying
- TG, glass transition temperature
- XRPD, x-ray powder diffraction
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Bispecific antibodies with Fab-arms featuring exchanged antigen-binding constant domains. Biochem Biophys Rep 2021; 26:100959. [PMID: 33718630 PMCID: PMC7920882 DOI: 10.1016/j.bbrep.2021.100959] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Revised: 12/16/2020] [Accepted: 02/16/2021] [Indexed: 12/27/2022] Open
Abstract
Monoclonal antibodies can acquire the property of engagement of a second antigen via fusion methods or modification of their CDR loops, but also by modification of their constant domains, such as in the mAb2 format where a set of mutated amino acid residues in the CH3 domains enables a high-affinity specific interaction with the second antigen. We tested the possibility of introducing multiple binding sites for the second antigen by replacing the Fab CH1/CL domain pair with a pair of antigen-binding CH3 domains in a model scaffold with trastuzumab variable domains and VEGF-binding CH3 domains. Such bispecific molecules were produced in a “Fab-like” format and in a full-length antibody format. Novel constructs were of expected molecular composition using mass spectrometry. They were expressed at a high level in standard laboratory conditions, purified as monomers with Protein A and gel filtration and were of high thermostability. Their high-affinity binding to both target antigens was retained. Finally, the Her2/VEGF binding domain-exchanged bispecific antibody was able to mediate a potentiated surface Her2-internalization effect on the Her2-overexpressing cell line SK-BR-3 due to improved level of cross-linking with the endogenously secreted cytokine. To conclude, bispecific antibodies with Fabs featuring exchanged antigen-binding CH3 domains offer an alternative solution in positioning and valency of antigen binding sites. Fab constant domains can be efficiently exchanged for antigen-binding CH3 domains. Such mutagenesis results in bispecific antibodies with correct chain pairing. Domain-exchanged bispecific Fab- and IgG-like formats are of favorable biophysical properties. Resulting bispecific antibodies show high-affinity binding to both target antigens.
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Key Words
- Ab, antibody
- BLI, biolayer interferometry
- BSA, bovine serum albumin
- Bispecific antibody
- CDR, complementarity determining region
- DSC, differential scanning calorimetry
- Domain-exchanged antibody
- EC50, half-maximal effective concentration
- FBS, fetal bovine serum
- FITC, fluorescein isothiocyanate
- Fab constant domain exchange
- Fab, fragment antigen binding
- Fc, fragment crystallizable
- Fcab, Fc with antigen binding properties
- HPLC-SEC, high pressure liquid chromatography-size exclusion chromatography
- Her2 internalization
- IgG, immunoglobulin G
- LC-ESI-MS, liquid chromatography-electrospray ionization-mass spectrometry
- PBS, phosphate buffered saline
- PE, phycoerythrin
- PEI, polyethylenimine
- PNGase F, Peptide:N-glycosidase F
- RMSD, root mean square deviation
- TRA, trastuzumab
- Tm, melting temperature
- VEGF, vascular endothelial growth factor
- “Knobs-into-holes” heterodimerization
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A Chitosan-PLGA based catechin hydrate nanoparticles used in targeting of lungs and cancer treatment. Saudi J Biol Sci 2020; 27:2344-2357. [PMID: 32884416 PMCID: PMC7451615 DOI: 10.1016/j.sjbs.2020.05.023] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2020] [Revised: 05/02/2020] [Accepted: 05/11/2020] [Indexed: 01/01/2023] Open
Abstract
OBJECTIVE To prepare a novel Chitosan (CS)-coated-PLGA-NPs of catechin hydrate (CTH) and to improve lungs bioavailability via direct nose to lungs-delivery for the comparative assessment of a pulmokinetics study by the first-time UHPLC-MS/MS developed method in the treatment of lungs cancer via anticancer activities on H1299 lung cancer cells. MATERIAL AND METHODS PLGA-NPs was prepared by solvent evaporation (double emulsion) method followed by coated with chitosan (CS) and evaluated based on release and permeation of drug, a comparative pulmokinetics study with their anticancer activities on H1299 lung cancer cells. RESULTS The particle size, PDI and ZP of the optimized CAT-PLGA-NPs and CS-CAT-PLGA-NPs were determined 124.64 ± 12.09 nm and 150.81 ± 15.91 nm, 0.163 ± 0.03 and 0.306 ± 0.03, -3.94 ± 0.19 mV and 26.01 ± 1.19 mV respectively. Furthermore, higher entrapment efficiency was observed for CS-CAT PLGA NPs. The release pattern of the CS-CAT-PLGA NPs was found to favor the release of entrapped CAT within the cancer microenvironment. CS-CAT-PLGA-NPs exposed on H1299 cancer cells upto 24.0 h was found to be higher cytotoxic as compared to CAT-solution (CAT-S). CS-CAT-PLGA-NPs showed higher apoptosis of cancer cells after their exposure as compared to CAT-S. CS-CTH-PLGA-NPs showed tremendous mucoadhesive-nature as compared to CTH-S and CS-CTH-PLGA NPs by retention time (RT) of 0.589 min, and m/z of 289.21/109.21 for CTH alongwith RT of 0.613 min and m/z of 301.21/151.21 was found out for IS (internal standard), i.e. Quercetin). Likewise, for 1-1000 ng mL-1 (linear range) of % accuracy (92.01-99.31%) and %CV (inter & intra-day, i.e. 2.14-3.33%) was determined. The improved Cmax with AUC0-24 was observed extremely significant (p < 0.001) via i.n. as compared oral and i.v. in the wistar rat's lungs. The CS-approach was successfully designed and safely delivered CAT to the lungs without causing any risk. CONCLUSION CS-CTH-PLGA-NPs were showed a significant role (p < 0.001) for the enhancement of lungs-bioavailability and potentially promising approach to treat lung cancers. CS-CTH-PLGA-NPs did not cause any toxicity, it showed safety and have no obvious toxic-effects on the rat's lungs and does not produce any mortality followed by no abnormal findings in the treated-rats.
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Key Words
- ANOVA, analysis of variance
- AUC, area under curve
- Apoptosis
- CC, calibration curve
- CH-S, catechin-hydrate-suspension
- CS, chitosan
- CS-CTH-PLGA-NPs
- CS-CTH-PLGA-NPs, chitosan-coated catechin hydrate-loaded-PLGA-nanoparticles
- CTH, Catechin hydrate
- Catechin hydrate
- Cmax, maximum plasma concentration
- DCM, dichloromethane
- DSC, differential scanning calorimetry
- EE, entrapment efficiency
- ESI, Electrospray ionization
- HQC, high quality control
- IS, internal standard
- Kel, elimination rate constant
- LC, loading capacity
- LLOQ, liquid–liquid extraction: LLE: lower limit of quantification
- LLOQQC, lower limit of quantification for quality control
- LOD, lower limit of detection
- LOQ, lower limit of quantitation
- Lung cancer
- Lungs comparative pulmokinetics
- MQC, low quality control: LQC: middle quality control
- NPs, nanoparticles
- PBS, phosphate buffered solution
- PDI, polydispersity index
- PVA, polyvinyl alcohol
- SEM, scanning electron microscope
- TEM, transmission electron microscope
- Tmax, time to Cmax
- UHPLC-MS/MS
- UHPLC-MS/MS, ultra high performance liquid chromatography mass spectroscopy and mass spectroscopy
- t½, half-life
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Glucosepane is associated with changes to structural and physical properties of collagen fibrils. Matrix Biol Plus 2019; 4:100013. [PMID: 33543010 PMCID: PMC7852203 DOI: 10.1016/j.mbplus.2019.100013] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Revised: 08/22/2019] [Accepted: 08/23/2019] [Indexed: 11/28/2022] Open
Abstract
Collagen glycation, and in particular the formation of advanced glycation end-product (AGE) crosslinks, plays a central role in the ageing process and in many of the long-term complications of diabetes. Glucosepane, the most abundant and relevant AGE crosslink, has been suggested to increase the stiffness of tissue and reduce its solubility, although no evidence is available concerning the mechanisms. We have used a combination of computational and experimental techniques to study a collagen-rich tissue with a relatively simple organisation to further our understanding of the impact of glucosepane on the structural and physical properties of collagen fibrils. Our work shows that glucosepane levels increase dramatically in aged tendon tissue and are associated with the reduced density of collagen packing and increased porosity to water molecules. Our studies provide the basis to understand many of the tissue dysfunctions associated with ageing and diabetes across a range of different tissues types. Levels of the advanced glycation end-product glucosepane increase in human tendon with increasing chronological age. Glucosepane results in a less tightly held helical structure in the collagen molecule and increased porosity to water. Water content is higher in Achilles and anterior tibialis tendon tissue from older individuals compared to young people. The denaturation temperature of collagen increases in the older age group suggesting a more highly cross-linked structure. The enthalpy of collagen denaturation decreases in older donors suggesting molecules are less confined within the fibril.
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Advances in coamorphous drug delivery systems. Acta Pharm Sin B 2019; 9:19-35. [PMID: 30766775 PMCID: PMC6361732 DOI: 10.1016/j.apsb.2018.08.002] [Citation(s) in RCA: 104] [Impact Index Per Article: 20.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2018] [Revised: 08/11/2018] [Accepted: 08/12/2018] [Indexed: 01/18/2023] Open
Abstract
In recent years, the coamorphous drug delivery system has been established as a promising formulation approach for delivering poorly water-soluble drugs. The coamorphous solid is a single-phase system containing an active pharmaceutical ingredient (API) and other low molecular weight molecules that might be pharmacologically relevant APIs or excipients. These formulations exhibit considerable advantages over neat crystalline or amorphous material, including improved physical stability, dissolution profiles, and potentially enhanced therapeutic efficacy. This review provides a comprehensive overview of coamorphous drug delivery systems from the perspectives of preparation, physicochemical characteristics, physical stability, in vitro and in vivo performance. Furthermore, the challenges and strategies in developing robust coamorphous drug products of high quality and performance are briefly discussed.
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Key Words
- API, active pharmaceutical ingredient;
- AUC, area under plasma concentrations-time curve
- BCS, bio-pharmaceutics classification systems
- Bioavailability
- Characterization
- Cmax, maximum plasma concentration
- Coamorphous
- Css, plasma concentration at steady state
- DSC, differential scanning calorimetry
- DVS, dynamic vapor sorption
- Dc, relative degree of crystallization
- Dissolution
- FT-IR, fourier transform infrared spectroscopy
- HME, hot melt extrusion
- HPLC, high performance liquid chromatography
- IDR, intrinsic dissolution rate
- LFRS, low-frequency Raman spectroscopy
- LLPS, liquid—liquid phase separation
- MTDSC, modulated temperature differential scanning calorimetry
- NMR, nuclear magnetic resonance
- P-gp, P-glycoprotein
- PXRD, powder X-ray diffraction
- Physical stability
- Preparation
- RH, relative humidity
- SEM, scanning electron microscope
- TGA, thermogravimetric analysis
- Tg, glass transition temperature
- Tmax, time of maximum plasma concentration
- UV, ultraviolet spectroscopy
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Genetic Mutations in the S-loop of Human Glutathione Synthetase: Links Between Substrate Binding, Active Site Structure and Allostery. Comput Struct Biotechnol J 2018; 17:31-38. [PMID: 30581542 PMCID: PMC6297838 DOI: 10.1016/j.csbj.2018.11.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Revised: 11/21/2018] [Accepted: 11/23/2018] [Indexed: 12/24/2022] Open
Abstract
The second step in the biosynthesis of the cellular antioxidant glutathione (GSH) is catalyzed by human glutathione synthetase (hGS), a negatively cooperative homodimer. Patients with mutations in hGS have been reported to exhibit a range of symptoms from hemolytic anemia and metabolic acidosis to neurological disorders and premature death. Several patient mutations occur in the S-loop of hGS, a series of residues near the negatively cooperative γ-GC substrate binding site. Experimental point mutations and molecular dynamic simulations show the S-loop not only binds γ-GC through a salt bridge and multiple hydrogen bonds, but the residues also modulate allosteric communication in hGS. By elucidating the role of S-loop residues in active site structure, substrate binding, and allostery, the atomic level sequence of events that leads to the detrimental effects of hGS mutations in patients are more fully understood.
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Key Words
- DSC, differential scanning calorimetry
- Eint, average energy of interaction.
- GSH, glutathione
- IPTG, isopropyl-1-thio-β-galactopyranoside
- LDH, lactate dehydrogenase
- MD, molecular dynamics
- PEP, phosphoenolpyruvic acid
- PK, pyruvate kinase
- Td, denaturation temperature midpoint
- WT, wild-type
- hGS, human glutathione synthetase
- γ-GC, γ-glutamylcysteine
- γ-GluABA, L-γ-glutamyl-L-α-aminobutyrate
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Development of a subunit vaccine for prevention of Clostridium difficile associated diseases: Biophysical characterization of toxoids A and B. Biochem Biophys Rep 2017; 9:193-202. [PMID: 28956005 PMCID: PMC5614615 DOI: 10.1016/j.bbrep.2016.12.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2016] [Revised: 12/07/2016] [Accepted: 12/20/2016] [Indexed: 11/20/2022] Open
Abstract
Inactivation of bacterial toxins for use in human vaccines traditionally is achieved by treatment with formaldehyde. In contrast, the bivalent experimental vaccine for the prevention of C. difficile infections (CDI) that is currently being evaluated in clinical trials was produced using a different strategy. C. difficile toxins A and B were inactivated using site-directed mutagenesis and treatment with 1-ethyl-3-[3-dimethylaminopropyl]carbodiimide hydrochloride/N-hydroxysulfosuccinimide (EDC/NHS). In the present work we investigate the effect of genetic and chemical modifications on the structure of inactivated toxins (toxoids) A and B. The far-UV circular dichroism (CD) spectra of wild type toxins, mutated toxins, and EDC/NHS-inactivated toxoids reveal that the secondary structure of all proteins is very similar. The near-UV CD spectra show that aromatic residues of all proteins are in a unique asymmetric environment, indicative of well-defined tertiary structure. These results along with the fluorescence emission maxima of 335 nm observed for all proteins suggest that the tertiary structure of toxoids A and B is preserved as well. Analytical ultracentrifugation data demonstrate that all proteins are predominantly monomeric with small fractions of higher molecular weight oligomeric species present in toxoids A and B. Differential scanning calorimetry data reveal that genetic mutations induce thermal destabilization of protein structures. Subsequent treatment with EDC/NHS results either in a minimal (1 °C) increase of apparent thermostability (toxoid B) or no change at all (toxoid A). Therefore, our two-step inactivation strategy is an effective approach for the preparation of non-toxic proteins maintaining native-like structure and conformation.
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Key Words
- ANS, 1-anilinonaphtalene-8-sulfonic acid
- Biophysical characterization
- C. difficile
- CD, circular dichroism spectroscopy
- DSC, differential scanning calorimetry
- EDC, 1-ethyl-3-[3–dimethylaminopropyl]carbodiimide hydrochloride
- NHS, N-hydroxysulfosuccinimide
- PBS, Phosphate buffered saline
- PM TcdB, D286A/D288A/C698A/E970K/E976K toxin B penta mutant
- Subunit vaccine
- TM TcdA, D285A/D287A/C700A toxin A triple mutant
- TM TcdB, D286A/D288A/C698A toxin B triple mutant
- TcdA, wild type toxin A
- TcdB, wild type toxin B
- Toxins/toxoids A and B
- TxdA, EDC/NHS-treated D285A/D287A/C700A toxoid A triple mutant
- TxdB, EDC/NHS-treated D286A/D288A/C698A toxoid B triple mutant
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Quantitative analysis of the impact of a human pathogenic mutation on the CCT5 chaperonin subunit using a proxy archaeal ortholog. Biochem Biophys Rep 2017; 12:66-71. [PMID: 29552646 PMCID: PMC5851525 DOI: 10.1016/j.bbrep.2017.07.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2017] [Revised: 07/21/2017] [Accepted: 07/26/2017] [Indexed: 01/20/2023] Open
Abstract
The human chaperonin complex is a ~ 1 MDa nanomachine composed of two octameric rings formed from eight similar but non-identical subunits called CCT. Here, we are elucidating the mechanism of a heritable CCT5 subunit mutation that causes profound neuropathy in humans. In previous work, we introduced an equivalent mutation in an archaeal chaperonin that assembles into two octameric rings like in humans but in which all subunits are identical. We reported that the hexadecamer formed by the mutant subunit is unstable with impaired chaperoning functions. This study quantifies the loss of structural stability in the hexadecamer due to the pathogenic mutation, using differential scanning calorimetry (DSC) and isothermal titration calorimetry (ITC). The disassembly of the wild type complex, which is tightly coupled with subunit denaturation, was decoupled by the mutation without affecting the stability of individual subunits. Our results verify the effectiveness of the homo-hexadecameric archaeal chaperonin as a proxy to assess the impact of subtle defects in heterologous systems with mutations in a single subunit. A crippling hereditary neuropathy was addressed at the molecular level. The archaeal/CCT5 model represents a promising testbed for subtle defects. The homomeric archaeal model amplifies the effect of the mutation. The mutation decouples assembly without destabilizing individual subunits.
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Hybrid polymeric matrices for oral modified release of Desvenlafaxine succinate tablets. Saudi Pharm J 2016; 25:676-687. [PMID: 28725139 PMCID: PMC5506642 DOI: 10.1016/j.jsps.2016.10.005] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2015] [Accepted: 10/07/2016] [Indexed: 11/29/2022] Open
Abstract
Purpose: Desvenlafaxine succinate (DSV) is a water soluble anti-depressant drug, which is rapidly absorbed after oral administration exaggerating its side effects. The current work aimed to prepare controllable release DSV matrix to reduce DSV side effects related to its initial burst. Methods: Fifteen DSV matrix formulations were prepared using different polymers, polymer/drug ratios and matrix excipients and characterized using Differential Scanning Calorimetry (DSC), infrared (IR) spectroscopy, water uptake and in vitro DSV release. The release kinetics were calculated to determine the drug release mechanism. Ex-vivo DSV absorption via rat intestinal mucosal cells and the calculation of the apparent permeability coefficient (Papp) were performed using everted sac technique. Results: Maltodextrin was the best matrix excipient (F7 and F10) showing acceptable decrease in the initial burst compared to the innovator. The addition of negatively charged polymers sodium carboxy methyl cellulose (SCMC) or sodium alginate resulted in an interaction that was proved by DSC and IR findings. This interaction slowed DSV release. F10 showed an excellent absorption of more than 80% of DSV after 4 h and the highest similarity factor with the innovator (84.7). Conclusion: A controllable release pattern of DSV was achieved using Methocel, Maltodextrin and SCMC. The obtained results could be used as a platform to control the release of cationic water soluble drugs that suffer from side effects associated with their initial burst after oral administration.
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14
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N-acetyl-L-methionine is a superior protectant of human serum albumin against post-translational oxidation as compared to N-acetyl-L-tryptophan. Biochem Biophys Rep 2016; 6:266-274. [PMID: 28955884 PMCID: PMC5600351 DOI: 10.1016/j.bbrep.2016.04.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2016] [Revised: 04/20/2016] [Accepted: 04/25/2016] [Indexed: 12/25/2022] Open
Abstract
Sodium octanoate and N-acetyl-L-tryptophan (N-AcTrp) are widely used as stabilizers during pasteurization and storage of albumin products. However, as compared with N-AcTrp, N-acetyl-L-methionine (N-AcMet) is superior in protecting albumin exposed to light during storage. Here, we examine, whether N-AcMet also is better than N-AcTrp to protect albumin against oxidation. Recombinant human serum albumin (rHSA) without and with N-AcMet or N-AcTrp was oxidized by using chloramine-T (CT) as a model compound for mimicking oxidative stress. Oxidation of rHSA was examined by determining carbonyl groups and advanced oxidation protein products. Structural changes were studied by native-PAGE, circular dichroism, intrinsic fluorescence and differential scanning calorimetry. The anti-oxidant capacity of CT-treated rHSA was quantified by its ability to scavenge peroxynitrite and the hydroxyl radical. The pharmacokinetics of indocyanine green-labeled albumin preparations was studied in male mice. We found that the number of chemical modifications and the structural changes of rHSA were significantly smaller in the presence of N-AcMet than in the presence of N-AcTrp. The anti-oxidant properties of CT-exposed rHSA were best protected by adding N-AcMet. Finally, N-AcMet is superior in preserving the normal pharmacokinetics of rHSA. Thus, N-AcMet is superior to N-AcTrp in protecting albumin preparations against oxidation. In addition, N-AcMet is probable also useful for protecting other proteins. Therefore, N-AcMet should be useful as a new and effective stabilizer and antioxidant for albumin isolated from blood, rHSA, albumin-fusion proteins and for preparations of rHSA-therapeutic complexes.
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Study on four polymorphs of bifendate based on X-ray crystallography. Acta Pharm Sin B 2016; 6:234-42. [PMID: 27175335 PMCID: PMC4856952 DOI: 10.1016/j.apsb.2016.03.006] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2016] [Revised: 03/09/2016] [Accepted: 03/15/2016] [Indexed: 01/25/2023] Open
Abstract
Bifendate, a synthetic anti-hepatitis drug, exhibits polycrystalline mode phenomena with 2 polymorphs reported (forms A and B). Single crystals of the known crystalline form B and 3 new crystallosolvates involving bifendate solvated with tetrahydrofuran (C), dioxane (D), and pyridine (E) in a stoichiometric ratio of 1:1 were obtained and characterized by X-ray crystallography, thermal analysis, and Fourier transform infrared (FT-IR) spectroscopy. The differences in molecular conformation, intermolecular interaction and crystal packing arrangement for the four polymorphs were determined and the basis for the polymorphisms was investigated. The rotation of single bonds resulted in different orientations for the biphenyl, methyl ester and methoxyl groups. All guest solvent molecules interacted with the host molecule via an interesting intercalative mode along the [1 0 0] direction in the channel formed by the host molecules through weak aromatic stacking interactions or non-classical hydrogen bonds, of which the volume and planarity played an important role in the intercalation of the host with the guest. The incorporation of solvent-augmented rotation of the C–C bond of the biphenyl group had a striking effect on the host molecular conformation and contributed to the formation of bifendate polymorphs. Moreover, the simulated powder X-ray diffraction (PXRD) patterns for each form were calculated on the basis of the single-crystal data and proved to be unique. The single-crystal structures of the four crystalline forms are reported in this paper.
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Key Words
- ADPs, anisotropic displacement parameters
- ALT, alanine transaminase
- Bifendate
- CCDC, Cambridge crystallographic data center
- DDB, dimethyl dimethoxy biphenyl dicarboxylate
- DSC, differential scanning calorimetry
- FT-IR
- FT-IR, Fourier transform infrared spectroscopy
- MW, molecular weight
- PXRD, powder X-ray diffraction
- Polymorphism
- SCXRD, single-crystal X-ray diffraction
- Single-crystal structure
- Solvatomorphism
- TGA, thermal gravimetric analyzer.
- Thermal analysis
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16
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Enhancement of antibody-dependent cell-mediated cytotoxicity by endowing IgG with FcαRI (CD89) binding. MAbs 2016; 7:743-51. [PMID: 25970007 DOI: 10.1080/19420862.2015.1047570] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
Fc effector functions such as antibody-dependent cell-mediated cytotoxicity (ADCC) and antibody-dependent cell-mediated phagocytosis (ADCP) are crucial to the efficacy of many antibody therapeutics. In addition to IgG, antibodies of the IgA isotype can also promote cell killing through engagement of myeloid lineage cells via interactions between the IgA-Fc and FcαRI (CD89). Herein, we describe a unique, tandem IgG1/IgA2 antibody format in the context of a trastuzumab variable domain that exhibits enhanced ADCC and ADCP capabilities. The IgG1/IgA2 tandem Fc format retains IgG1 FcγR binding as well as FcRn-mediated serum persistence, yet is augmented with myeloid cell-mediated effector functions via FcαRI/IgA Fc interactions. In this work, we demonstrate anti-human epidermal growth factor receptor-2 antibodies with the unique tandem IgG1/IgA2 Fc can better recruit and engage cytotoxic polymorphonuclear (PMN) cells than either the parental IgG1 or IgA2. Pharmacokinetics of IgG1/IgA2 in BALB/c mice are similar to the parental IgG, and far surpass the poor serum persistence of IgA2. The IgG1/IgA2 format is expressed at similar levels and with similar thermal stability to IgG1, and can be purified via standard protein A chromatography. The tandem IgG1/IgA2 format could potentially augment IgG-based immunotherapeutics with enhanced PMN-mediated cytotoxicity while avoiding many of the problems associated with developing IgAs.
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Key Words
- ADCC
- ADCC, antibody-dependent cell-mediated cytotoxicity
- ADCP, antibody-dependent cell-mediated phagocytosis
- AUC, area under the curve; CL, clearance rate
- CD89
- CDC, complement dependent cytotoxicity
- Cmax, maximum serum concentration
- DSC, differential scanning calorimetry
- E:T ratio, effector to target ratio
- FCM, flow cytometry
- FcRn, neonatal Fc receptor
- FcαRI
- FcγR, Fc gamma receptor
- HER2, human epithelial receptor two
- IgA
- IgA, immunoglobulin A
- IgG, immunoglobulin G
- LDH, lactate dehydrogenase
- MΦ, macrophage
- NK, natural killer
- PBMC, peripheral blood mononuclear cell
- PK, pharmacokinetics
- PMN, polymorphonuclear
- SPR, surface plasmon resonance
- TAA, tumor associated antigens
- T½, half-life
- Vss, central compartment volume of distribution
- macrophage
- monoclonal antibody
- neutrophil
- tandem
- trastuzumab
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Abstract
The application of monoclonal antibodies as commercial therapeutics poses substantial demands on stability and properties of an antibody. Therapeutic molecules that exhibit favorable properties increase the success rate in development. However, it is not yet fully understood how the protein sequences of an antibody translates into favorable in vitro molecule properties. In this work, computational design strategies based on heuristic sequence analysis were used to systematically modify an antibody that exhibited a tendency to precipitation in vitro. The resulting series of closely related antibodies showed improved stability as assessed by biophysical methods and long-term stability experiments. As a notable observation, expression levels also improved in comparison with the wild-type candidate. The methods employed to optimize the protein sequences, as well as the biophysical data used to determine the effect on stability under conditions commonly used in the formulation of therapeutic proteins, are described. Together, the experimental and computational data led to consistent conclusions regarding the effect of the introduced mutations. Our approach exemplifies how computational methods can be used to guide antibody optimization for increased stability.
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Abstract
A myriad of innovative bispecific antibody (BsAb) platforms have been reported. Most require significant protein engineering to be viable from a development and manufacturing perspective. Single-chain variable fragments (scFvs) and diabodies that consist only of antibody variable domains have been used as building blocks for making BsAbs for decades. The drawback with Fv-only moieties is that they lack the native-like interactions with CH1/CL domains that make antibody Fab regions stable and soluble. Here, we utilize a redesigned Fab interface to explore 2 novel Fab-based BsAbs platforms. The redesigned Fab interface designs limit heavy and light chain mixing when 2 Fabs are co-expressed simultaneously, thus allowing the use of 2 different Fabs within a BsAb construct without the requirement of one or more scFvs. We describe the stability and activity of a HER2×HER2 IgG-Fab BsAb, and compare its biophysical and activity properties with those of an IgG-scFv that utilizes the variable domains of the same parental antibodies. We also generated an EGFR × CD3 tandem Fab protein with a similar format to a tandem scFv (otherwise known as a bispecific T cell engager or BiTE). We show that the Fab-based BsAbs have superior biophysical properties compared to the scFv-based BsAbs. Additionally, the Fab-based BsAbs do not simply recapitulate the activity of their scFv counterparts, but are shown to possess unique biological activity.
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Key Words
- BiTE, bispecific T cell engager
- BsAb, bispecific antibody
- CD, circular dichroism
- DSC, differential scanning calorimetry
- Fab interface design
- Fab, antigen binding antibody fragment
- Fv, variable domains antibody fragment
- HC, antibody heavy chain
- IgG-Fab
- LC, antibody light chain
- LCMS, liquid chromatography with in-line mass spectrometry
- SEC-LC, size exclusion chromatography with in-line static light scattering
- T cell
- Tm, temperature at the midpoint of thermal unfolding
- bispecific antibody
- mAb, monoclonal antibody
- scFv, single chain Fv
- tandem Fab
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Protein design of IgG/TCR chimeras for the co-expression of Fab-like moieties within bispecific antibodies. MAbs 2015; 7:364-76. [PMID: 25611120 DOI: 10.1080/19420862.2015.1007826] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
Abstract
Immunoglobulins and T cell receptors (TCRs) share common sequences and structures. With the goal of creating novel bispecific antibodies (BsAbs), we generated chimeric molecules, denoted IgG_TCRs, where the Fv regions of several antibodies were fused to the constant domains of the α/β TCR. Replacing CH1 with Cα and CL with Cβ, respectively, was essential for achieving at least partial heavy chain/light chain assembly. Further optimization of the linker regions between the variable and constant domains, as well as replacement of the large FG loop of Cβ with a canonical β-turn, was necessary to consistently obtain full heavy chain/light chain assembly. The optimized IgG_TCR molecules were evaluated biophysically and shown to maintain the binding properties of their parental antibodies. A few BsAbs were generated by co-expressing native Fabs and IgG_TCR Fabs within the same molecular construct. We demonstrate that the IgG_TCR designs steered each of the light chains within the constructs to specifically pair with their cognate heavy chain counterparts. We did find that even with complete constant domain specificity between the CH1/CL and Cα/Cβ domains of the Fabs, strong variable domain interactions can dominate the pairing specificity and induce some mispairing. Overall, the IgG_TCR designs described here are a first step toward the generation of novel BsAbs that may be directed toward the treatment of multi-faceted and complex diseases.
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Key Words
- DSC, differential scanning calorimetry
- FG loop
- HC, heavy chain
- Ha, heavy chain containing Ca in place of CH1
- Hb, heavy chain containing Cb in place of CH1
- LC, light chain
- La, heavy chain containing Ca in place of CL
- Lb, heavy chain containing Cb in place of CL
- RU, resonance units
- SDS-PAGE, sodium dodecyl sulfate-polyacrylamide gel electrophoresis
- SEC, size exclusion chromatography
- SPR, surface plasmon resonance
- T cell receptor
- TCR, T cell receptor
- bispecific antibody
- protein chimera
- protein design
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20
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Correlations between changes in conformational dynamics and physical stability in a mutant IgG1 mAb engineered for extended serum half-life. MAbs 2015; 7:84-95. [PMID: 25524268 DOI: 10.4161/19420862.2014.985494] [Citation(s) in RCA: 57] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
This study compares the local conformational dynamics and physical stability of an IgG1 mAb (mAb-A) with its corresponding YTE (M255Y/S257T/T259E) mutant (mAb-E), which was engineered for extended half-life in vivo. Structural dynamics was measured using hydrogen/deuterium (H/D) exchange mass spectrometry while protein stability was measured with differential scanning calorimetry (DSC) and size exclusion chromatography (SEC). The YTE mutation induced differences in H/D exchange kinetics at both pH 6.0 and 7.4. Segments covering the YTE mutation sites and the FcRn binding epitopes showed either subtle or no observable differences in local flexibility. Surprisingly, several adjacent segments in the CH2 and distant segments in the VH, CH1, and VL domains had significantly increased flexibility in the YTE mutant. Most notable among the observed differences is increased flexibility of the 244-254 segment of the CH2 domain, where increased flexibility has been shown previously to correlate with decreased conformational stability and increased aggregation propensity in other IgG1 mAbs (e.g., presence of destabilizing additives as well as upon de-glycosylation or methionine oxidation). DSC analysis showed decreases in both thermal onset (Tonset) and unfolding (Tm1) temperatures of 7°C and 6.7°C, respectively, for the CH2 domain of the YTE mutant. In addition, mAb-E aggregated faster than mAb-A under accelerated stability conditions as measured by SEC analysis. Hence, the relatively lower physical stability of the YTE mutant correlates with increased local flexibility of the 244-254 segment, providing a site-directed mutant example that this segment of the CH2 domain is an aggregation hot spot in IgG1 mAbs.
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Key Words
- CH1-CH3, constant domains 1–3, respectively, of the heavy chain of a monoclonal antibody
- DSC, differential scanning calorimetry
- Fab, antigen binding fragment of a monoclonal antibody
- Fc, crystallizable fragment of a monoclonal antibody
- HC, heavy chain of a monoclonal antibody
- HX-MS, hydrogen/deuterium exchange mass spectrometry
- LC, light chain of a monoclonal antibody
- VH/VL, variable domain of the heavy/light chain of a monoclonal antibody
- YTE mutation
- aggregation
- differential scanning calorimetry
- flexibility
- hydrogen/deuterium exchange
- immunoglobulin G1
- mass spectrometry
- monoclonal antibody
- stability
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21
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Abstract
Antibody engineering to enhance thermostability may enable further application and ease of use of antibodies across a number of different areas. A modified human IgG framework has been developed through a combination of engineering approaches, which can be used to stabilize antibodies of diverse specificity. This is achieved through a combination of complementarity-determining region (CDR)-grafting onto the stable framework, mammalian cell display and in vitro somatic hypermutation (SHM). This approach allows both stabilization and maturation to affinities beyond those of the original antibody, as shown by the stabilization of an anti-HA33 antibody by approximately 10°C and affinity maturation of approximately 300-fold over the original antibody. Specificities of 10 antibodies of diverse origin were successfully transferred to the stable framework through CDR-grafting, with 8 of these successfully stabilized, including the therapeutic antibodies adalimumab, stabilized by 9.9°C, denosumab, stabilized by 7°C, cetuximab stabilized by 6.9°C and to a lesser extent trastuzumab stabilized by 0.8°C. This data suggests that this approach may be broadly useful for improving the biophysical characteristics of antibodies across a number of applications.
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Key Words
- CDR, complementarity-determining region
- CH2, heavy chain constant domain 2
- CH3, heavy chain constant domain 3
- DSC, differential scanning calorimetry
- HC, heavy chain
- LC, light chain
- NGF, β-nerve growth factor
- SHM, somatic hypermutation
- SPR, surface plasmon resonance
- TNF, tumor necrosis factor
- Tm, melting temperature
- VH, heavy chain variable region
- VL, light chain variable region
- affinity maturation
- monoclonal antibodies
- protein engineering
- solubility
- somatic hypermutation
- thermostability
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Development of a new ferulic acid certified reference material for use in clinical chemistry and pharmaceutical analysis. Acta Pharm Sin B 2015; 5:231-7. [PMID: 26579451 PMCID: PMC4629261 DOI: 10.1016/j.apsb.2015.03.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2015] [Revised: 03/04/2015] [Accepted: 03/14/2015] [Indexed: 11/24/2022] Open
Abstract
This study compares the results of three certified methods, namely differential scanning calorimetry (DSC), the mass balance (MB) method and coulometric titrimetry (CT), in the purity assessment of ferulic acid certified reference material (CRM). Purity and expanded uncertainty as determined by the three methods were respectively 99.81%, 0.16%; 99.79%, 0.16%; and 99.81%, 0.26% with, in all cases, a coverage factor (k) of 2 (P=95%). The purity results are consistent indicating that the combination of DSC, the MB method and CT provides a confident assessment of the purity of suitable CRMs like ferulic acid.
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Key Words
- ASTM, American Society for Testing and Materials
- CRM, certified reference material
- CT, coulometric titrimetry
- Certified reference material
- Coulometric titrimetry
- DAD, diode-array detector
- DSC, differential scanning calorimetry
- Differential scanning calorimetry
- EDQM, European Directorate for Quality Medicine
- Ferulic acid
- GUM, Guide to the Expression of Uncertainty in Measurement
- ISO, International Organization for Standardization
- MB, mass balance
- Mass balance
- RM, reference material
- SI, International System of Units
- Uncertainty
- WHO, World Health Organization
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23
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Effect of mutations on the thermostability of Aspergillus aculeatus β-1,4-galactanase. Comput Struct Biotechnol J 2015; 13:256-64. [PMID: 25941560 PMCID: PMC4412966 DOI: 10.1016/j.csbj.2015.03.010] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2014] [Revised: 03/27/2015] [Accepted: 03/31/2015] [Indexed: 11/17/2022] Open
Abstract
New variants of β-1,4-galactanase from the mesophilic organism Aspergillus aculeatus were designed using the structure of β-1,4-galactanase from the thermophile organism Myceliophthora thermophila as a template. Some of the variants were generated using PROPKA 3.0, a validated pKa prediction tool, to test its usefulness as an enzyme design tool. The PROPKA designed variants were D182N and S185D/Q188T, G104D/A156R. Variants Y295F and G306A were designed by a consensus approach, as a complementary and validated design method. D58N was a stabilizing mutation predicted by both methods. The predictions were experimentally validated by measurements of the melting temperature (Tm ) by differential scanning calorimetry. We found that the Tm is elevated by 1.1 °C for G306A, slightly increased (in the range of 0.34 to 0.65 °C) for D182N, D58N, Y295F and unchanged or decreased for S185D/Q188T and G104D/A156R. The Tm changes were in the range predicted by PROPKA. Given the experimental errors, only the D58N and G306A show significant increase in thermodynamic stability. Given the practical importance of kinetic stability, the kinetics of the irreversible enzyme inactivation process were also investigated for the wild-type and three variants and found to be biphasic. The half-lives of thermal inactivation were approximately doubled in G306A, unchanged for D182N and, disappointingly, a lot lower for D58N. In conclusion, this study tests a new method for estimating Tm changes for mutants, adds to the available data on the effect of substitutions on protein thermostability and identifies an interesting thermostabilizing mutation, which may be beneficial also in other galactanases.
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Key Words
- AZCL-galactan, azurine-crosslinked galactan
- AaGal, β-1,4-galactanase from Aspergillus aculeatus
- CAZY, carbohydrate active enzyme database
- Computational prediction
- DSC, differential scanning calorimetry
- GH53
- MtGal, β-1,4-galactanase from Myceliophthora thermophila
- Protein design
- Thermostability
- Tm, melting temperature
- TsGal, Talaromyces stipitatus galactanase
- WT, wild type
- β-1,4-galactanase
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MutT from the fish pathogen Aliivibrio salmonicida is a cold-active nucleotide-pool sanitization enzyme with unexpectedly high thermostability. FEBS Open Bio 2015; 5:107-16. [PMID: 25737836 PMCID: PMC4338371 DOI: 10.1016/j.fob.2015.01.006] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2014] [Revised: 01/13/2015] [Accepted: 01/27/2015] [Indexed: 02/08/2023] Open
Abstract
Upon infection by pathogenic bacteria, production of reactive oxygen species (ROS) is part of the host organism's first line of defence. ROS damage a number of macromolecules, and in order to withstand such a harsh environment, the bacteria need to have well-functioning ROS scavenging and repair systems. Herein, MutT is an important nucleotide-pool sanitization enzyme, which degrades 8-oxo-dGTP and thus prevents it from being incorporated into DNA. In this context, we have performed a comparative biochemical and structural analysis of MutT from the fish pathogen Aliivibrio salmonicida (AsMutT) and the human pathogen Vibrio cholerae (VcMutT), in order to analyse their function as nucleotide sanitization enzymes and also determine possible cold-adapted properties of AsMutT. The biochemical characterisation revealed that both enzymes possess activity towards the 8-oxo-dGTP substrate, and that AsMutT has a higher catalytic efficiency than VcMutT at all temperatures studied. Calculations based on the biochemical data also revealed a lower activation energy (E a) for AsMutT compared to VcMutT, and differential scanning calorimetry experiments showed that AsMutT displayed an unexpected higher melting temperature (T m) value than VcMutT. A comparative analysis of the crystal structure of VcMutT, determined to 2.42 Å resolution, and homology models of AsMutT indicate that three unique Gly residues in loops of VcMutT, and additional long range ion-pairs in AsMutT could explain the difference in temperature stability of the two enzymes. We conclude that AsMutT is a stable, cold-active enzyme with high catalytic efficiency and reduced E a, compared to the mesophilic VcMutT.
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Development of a stable low-dose aglycosylated antibody formulation to minimize protein loss during intravenous administration. MAbs 2015; 7:792-803. [PMID: 26073995 PMCID: PMC4622870 DOI: 10.1080/19420862.2015.1046664] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2015] [Revised: 04/21/2015] [Accepted: 04/22/2015] [Indexed: 10/23/2022] Open
Abstract
The physical and chemical integrity of a biopharmaceutical must be maintained not only during long-term storage but also during administration. Specifically for the intravenous (i.v.) delivery of a protein drug, loss of stability can occur when the protein formulation is compounded with i.v. bag diluents, thus modifying the original composition of the drug product. Here we present the challenges associated with the delivery of a low-dose, highly potent monoclonal antibody (mAb) via the i.v. route. Through parallel in-use stability studies and conventional formulation development, a drug product was developed in which adsorptive losses and critical oxidative degradation pathways were effectively controlled. This development approach enabled the i.v. administration of clinical doses in the range of 0.1 to 0.5 mg total protein, while ensuring liquid drug product storage stability under refrigerated conditions.
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Key Words
- CD3, cluster of differentiation 3
- CMC, critical micelle concentration
- Cys, cysteine
- DSC, differential scanning calorimetry
- EDTA, edetate disodium
- Glut, glutathione
- HPLC, high performance liquid chromatography
- M, methionine residues
- MS, mass spectrometry
- MTG, monothioglycerol
- Met, methionine
- PES, polyethersulfone
- PO, polyolefin
- PS80, polysorbate 80
- PVC, polyvinylchloride
- SDS-PAGE, sodium dodecyl sulfate polyacrylamide gel electrophoresis
- administration
- adsorption
- antioxidant
- biopharmaceutical
- cIEF, capillary isoelectric focusing
- dilution
- i.v., intravenous
- infusion
- intravenous
- low concentration
- low dose
- mAb, monoclonal antibody
- monoclonal antibody
- oxidation
- stability
- surfactant
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Design and evaluation of gastroretentive levofloxacin floating mini-tablets-in-capsule system for eradication of Helicobacter pylori. Saudi Pharm J 2014; 22:570-9. [PMID: 25561871 PMCID: PMC4281621 DOI: 10.1016/j.jsps.2014.02.009] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2013] [Accepted: 02/15/2014] [Indexed: 02/07/2023] Open
Abstract
Gastroretentive levofloxacin (LVF) floating mini-tablets for the eradication of Helicobacter pylori (H. pylori) were prepared using the matrix forming polymer hydroxypropyl methylcellulose (HPMC K100M), alone or with Carbopol 940P in different ratios by wet granulation technique. Buoyancy of mini-tablets was achieved by an addition of an effervescent mixture consisting of sodium bicarbonate and anhydrous citric acid to some formulations. The prepared mini-tablets were evaluated for weight variation, thickness, friability, hardness, drug content, in vitro buoyancy, water uptake and in vitro release. The optimized formula was subjected to further studies: FT-IR, DSC analysis and in vivo examination in healthy volunteers. The prepared mini-tablets exhibited satisfactory physicochemical characteristics. Incorporation of gas-generating agent improved the floating parameters. HPMC K100M mini-tablet formulation (F1) offered the best controlled drug release (>8 h) along with floating lag time <1 s and total floating time >24 h. The obtained DSC thermograms and FT-IR charts indicated that there is no positive evidence for the interaction between LVF and ingredients of the optimized formula. The in vivo test confirmed the success of the optimized formula F1 in being retained in the stomach of the volunteers for more than 4 h. LVF floating mini-tablets based on HPMC K100M is a promising formulation for eradication of H. pylori.
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The complex structures of isocitrate dehydrogenase from Clostridium thermocellum and Desulfotalea psychrophila suggest a new active site locking mechanism. FEBS Open Bio 2012; 2:159-72. [PMID: 23650595 PMCID: PMC3642140 DOI: 10.1016/j.fob.2012.06.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2012] [Revised: 06/28/2012] [Accepted: 06/28/2012] [Indexed: 11/29/2022] Open
Abstract
Isocitrate dehydrogenase (IDH) catalyzes the oxidative NAD(P)+-dependent decarboxylation of isocitrate into α-ketoglutarate and CO2 and is present in organisms spanning the biological range of temperature. We have solved two crystal structures of the thermophilic Clostridium thermocellum IDH (CtIDH), a native open apo CtIDH to 2.35 Å and a quaternary complex of CtIDH with NADP+, isocitrate and Mg2+ to 2.5 Å. To compare to these a quaternary complex structure of the psychrophilic Desulfotalea psychrophila IDH (DpIDH) was also resolved to 1.93 Å. CtIDH and DpIDH showed similar global thermal stabilities with melting temperatures of 67.9 and 66.9 °C, respectively. CtIDH represents a typical thermophilic enzyme, with a large number of ionic interactions and hydrogen bonds per residue combined with stabilization of the N and C termini. CtIDH had a higher activity temperature optimum, and showed greater affinity for the substrates with an active site that was less thermolabile compared to DpIDH. The uncompensated negative surface charge and the enlarged methionine cluster in the hinge region both of which are important for cold activity in DpIDH, were absent in CtIDH. These structural comparisons revealed that prokaryotic IDHs in subfamily II have a unique locking mechanism involving Arg310, Asp251′ and Arg255 (CtIDH). These interactions lock the large domain to the small domain and direct NADP+ into the correct orientation, which together are important for NADP+ selectivity.
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Key Words
- CtIDH, Clostridium thermocellum IDH
- DSC, differential scanning calorimetry
- DhIDH, Desulfitobacterium hafniense IDH
- Domain movement
- DpIDH, Desulfotalea psychrophila IDH
- EcIDH, Escherichia coli IDH
- HcIDH, human cytosolic IDH
- IDH, isocitrate dehydrogenase
- NADP+ selectivity
- PcIDH, porcine heart mitochondrial IDH
- Psychrophilic
- ScIDH, Saccharomyces cerevesiae mitochondrial IDH
- Temperature adaptation
- Thermophilic
- Tm, apparent melting temperature
- TmIDH, Thermotoga maritima
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Abstract
Structural analyses of actin binding regions comprising tandem calponin homology domains alone and when bound to F-actin have revealed a number of different conformations with calponin homology domains in ‘open’ and ‘closed’ positions. In an attempt to resolve these issues we have examined the properties of the utrophin actin binding domain in open and closed conformations in order to verify the conformation when bound to F-actin. Locking the actin binding domain in a closed conformation using engineered cysteine residues in each calponin homology domain reduced the affinity for F-actin without affecting the stoichiometry furthermore differential scanning calorimetry experiments revealed a reduction in melting temperature on binding to actin. The data suggest the amino-terminal utrophin actin binding domain is in an open conformation in solution and when bound to F-actin.
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Key Words
- ABD, actin binding domain
- Actin binding domain
- CD, circular dichroism
- CH, calponin homology
- Calponin homology domain
- DSC, differential scanning calorimetry
- Differential scanning calorimetry
- Dystrophin
- EM, electron microscopy
- F-actin, filamentous actin
- NTCB, 2-nitro-5-thiocyanobenzoic acid
- SDS-PAGE, sodium dodecyl sulphate poly-acrylamide electrophoresis
- Spectrin
- Tm, melting temperature
- UTR261, utrophin residues 1-261
- α-Actinin
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