Rhizosphere processes by the nickel hyperaccumulator Odontarrhena chalcidica suggest Ni mobilization

Background and aims

Plant Ni uptake in aboveground biomass exceeding concentrations of 1000 μg g-1 in dry weight is defined as Ni hyperaccumulation. Whether hyperaccumulators are capable of mobilizing larger Ni pools than non-accumulators is still debated and rhizosphere processes are still largely unknown. The aim of this study was to investigate rhizosphere processes and possible Ni mobilization by the Ni hyperaccumulator Odontarrhena chalcidica and to test Ni uptake in relation to a soil Ni gradient.

Methods

The Ni hyperaccumulator O. chalcidica was grown in a pot experiment on six soils showing a pseudo-total Ni and labile (DTPA-extractable) Ni gradient and on an additional soil showing high pseudo-total but low labile Ni. Soil pore water was sampled to monitor changes in soil solution ionome, pH, and dissolved organic carbon (DOC) along the experiment.

Results

Results showed that Ni and Fe concentrations, pH as well as DOC concentrations in pore water were significantly increased by O. chalcidica compared to unplanted soils. A positive correlation between Ni in shoots and pseudo-total concentrations and pH in soil was observed, although plant Ni concentrations did not clearly show the same linear pattern with soil available Ni.

Conclusions

This study shows a clear root-induced Ni and Fe mobilization in the rhizosphere of O. chalcidica and suggests a rhizosphere mechanism based on soil alkalinization and exudation of organic ligands. Furthermore, it was demonstrated that soil pH and pseudo-total Ni are better predictors of Ni plant uptake in O. chalcidica than labile soil Ni.

Supplementary Information

The online version contains supplementary material available at 10.1007/s11104-023-06161-w.

Phytoremediation efficiency of Vigna mungo with the amalgamation of indigenous metal tolerant bacterial strain on metal polluted agriculture soil

This research was performed to evaluate physico-chemical properties of farmland soil nearby the magnesite mine site. Unexpectedly, few physico-chemical properties were crossing the acceptable limits. Particularly, the quantities of Cd (112.34 ± 3.25), Pb (386.42 ± 11.71), Zn (854.28 ± 3.53), and Mn (2538 ± 41.11) were crossing the permissible limits. Among 11 bacterial cultures isolated from the metal contaminated soil, 2 isolates names as SS1 and SS3 showed significant multi-metal tolerance up to the concentration of 750 mg L^-1. Furthermore, these strains also showed considerable metal mobilization as well as absorption ability on metal contaminated soil under in-vitro conditions. In a short duration of treatment, these isolates effectively mobilize and absorb the metals from the polluted soil. The results obtained from the greenhouse investigation with Vigna mungo revealed that the among various treatment (T1 to T5) groups, the T3 (V.mungo + SS1+SS3) showed remarkable phytoremediation potential (Pb: 50.88, Mn: 152, Cd: 14.54, and Zn: 67.99 mg kg^-1) on metal contaminated soil. Furthermore, these isolates influence the growth as well as biomass of V.mungo under greenhouse conditions on metal contaminated soil. These findings suggest that combining multi-metal tolerant bacterial isolates can improve the phytoextraction efficiency of V.mungo on metal-contaminated soil.

Environmental risk assessment of potentially toxic elements in Doce River watershed after mining sludge dam breakdown in Mariana, MG, Brazil

Faced with a potential risk of a colossal amount of sludge released into the Doce River basin in the most shocking Brazilian mining disaster, we proposed to assess the environmental risk from a new perspective: Understanding the mobilization of potentially toxic elements (PTE) with the geochemical fractions. Soil and sediment samples were taken in nine sites throughout the basin and characterized. The environmental risk was assessed from the PTE sequential extraction in three fractions: soluble, reducible, and oxidizable, in addition to the pseudo-total concentration. The potential mobile fraction (PMF) showed a considerable PTE mobilization from the soil and sediment samples. Principal component statistical analysis indicated the sludge as the single source of PTE. The risk assessment depended on the fractional distribution and the PTE enrichment degree in the affected samples. The fractional distribution contributed mainly to Mn, Sb, and Pb mobility, with PMF of 96%, 81%, and 100%, respectively. The mobilization of Cd, Co, Ag, Ni, Pb, Zn, and Cu was predominantly related to the degree of enrichment. The risk assessment from the geochemical fractions pointed to the magnitude of the disaster and the dispersion of PTE with severe effects on the affected populations. Therefore, more strongly enforced regulations in the basin are needed, in addition to the urgent use of more secure containment dams. It is also essential to emphasize the transferability of the design of this study to other environmental units in mining disaster conditions.

Remediation and its biological responses to Cd(II)-Cr(VI)-Pb(II) multi-contaminated soil by supported nano zero-valent iron composites

Multi-metal contaminated soil has received extensive attention. The biochar and bentonite-supported nano zero-valent iron (nZVI) (BC-BE-nZVI) composite was synthesized in this study by the liquid-phase reduction method. Subsequently, the BC-BE-nZVI composite was applied to immobilize cadmium (Cd), chromium (Cr), and lead (Pb) in simulated contaminated soil. The simultaneous immobilization efficiencies of Cd, Cr(VI), Cr_total, and Pb were achieved at 70.95 %, 100 %, 86.21 %, and 100 %, respectively. In addition, mobility and bioavailabilities of Cd, Cr, and Pb were significantly decreased and the risk of iron toxicity was reduced. Stabilized metal species in the contaminated soil (e.g., Cd(OH)₂, Cd-Fe-(OH)₂, Cr_xFe_1-xOOH, Cr_xFe_1-x(OH)₃, PbO, PbCrO₄, and Pb(OH)₂) were formed after the BC-BE-nZVI treatment. Thus, the immobilization mechanisms of Cd, Cr, and Pb, including adsorption, reduction, co-precipitation, and complexation co-exist with the metals. More importantly, bacterial richness, bacterial diversity, soil enzyme activities (dehydrogenase, urease, and fluorescein diacetate hydrolase), and microbial activity were enhanced by applying the BC-BE-nZVI composite, thus increasing the soil metabolic function. Over all, this work applied a promising procedure for remediating multi- metal contaminated soil by using the BC-BE-nZVI composite.

Application of microbe-impregnated tannery solid waste biochar in soil enhances growth performance of sunflower

Synergistic effect of biochar and microbes in soil enhances performance of plants. Hazardous tannery solid waste can be reduced by one-third in volume by conversion to biochar. A greenhouse trial was set up with soil having different doses of metal resistant microbe-impregnated biochar (MIBC) prepared from tannery solid waste. Consortia of autochthonous strains of Trichoderma and Bacillus were inoculated on BC and the behavior and fate of metals were evaluated for their bioavailability to sunflower. Sunflower was grown in pots for 80 days having six different amendments of tannery solid waste biochar (0-10% w/w) with and without Trichoderma and Bacillus consortia and its morphological and biochemical attributes as well as metal uptake were observed. The results illustrated that application of BC at 2% rate without inoculation increased the shoot length and dry biomass by 19.8% and 77.4%, respectively, while plant growth and performance were reduced at higher amendments of BC. However, application of MIBC with Trichoderma or/and Bacillus consortium significantly improved the plant attributes at all levels of amendment. The results indicated that MIBC having Trichoderma and Bacillus consortia at 10% rate increased shoot length and dry biomass by 65.3% and 516% compared to control without BC. Application of BC without inoculation reduced the uptake of Cu, Fe, and Ni and increased the mobilization of all other metals for uptake in sunflower. Mobilization and uptake of Cd, Cr, Cu, Ni, Pb, and Zn decreased with MIBC having Trichoderma and Bacillus consortia whereas that of Fe and Mg were noted. A considerable decrease in proline and total phenolic content was demonstrated by MIBC-grown sunflower. The data of metal fractionation in BC also supported the above findings. Therefore, MIBC can be used as a promising option for enhancing growth performance and ensuring the physiological safety of sunflower as an energy crop.

Enhanced phytoextraction of multi-metal contaminated soils under increased atmospheric temperature by bioaugmentation with plant growth promoting Bacillus cereus

The co-occurrence of environmental stresses such as heavy metals (HM) and increased atmospheric temperature (IAT) pose serious implications on plant growth and productivity. In this work, we evaluated the role of plant growth-promoting bacteria (PGPB) and its effectiveness on Zea mays growth, stress tolerance and phytoremediation potential in multi-metal (MM) contaminated soils under IAT stress conditions. The PGPB strain TCU11 was isolated from metal contaminated soils and identified as Bacillus cereus. TCU11 was able to resist abiotic stresses such as IAT (45 °C), MM (Pb, Zn, Ni, Cu, and Cd), antibiotics and induced in vitro plant growth promotion (PGP) by producing siderophores (catechol and hydroxymate) and indole 3-acetic acid even in the presence of MM under IAT. Inoculation of TCU11 significantly increased the biomass, chlorophyll, carotenoids, and protein content of Z. mays compared to the respective control under MM, IAT, and MM + IAT stress. A decrease of malondialdehyde and over-accumulation of total phenolics, proline along with the increased activity of superoxide dismutase, catalase and ascorbic peroxidase were observed in TCU11 inoculated plants under stress conditions. These results suggested MM and/or IAT significantly reduced the maize growth, whereas TCU11 inoculation mitigated the combined stress effects on maize performance. Moreover, the inoculation of TCU11 under IAT stress increased the MM (Pb, Zn, Ni, Cu, and Cd) accumulation in plant tissues and also increased the translocation of HM from root to shoot except for Ni. The results of soil HM mobilization further indicates that IAT increased the HM mobilizing activity of TCU11, thus increasing the concentrations of bio-available HM in soil. These results suggested that TCU11 not only alleviates MM and IAT stresses but also enhances the biomass production and HM accumulation in plants. Therefore, TCU11 can be exploited as inoculums for improving the phytoremediation efficiency in MM polluted soils under IAT conditions.

The performance of mycorrhizae, rhizobacteria, and earthworms to improve Bermuda grass (Cynodon dactylon) growth and Pb uptake in a Pb-contaminated soil

The current study was conducted to determine the combined performance of soil micro- and macro-organisms to stimulate the growth and lead (Pb) uptake of Bermuda grass (Cynodon dactylon (L.) Persi.) in a soil polluted with Pb-mining activities. Plants were inoculated with a mixture of arbuscular mycorrhizal (AM) fungal species, plant growth-promoting rhizobacteria (PGPR) species, and epigeic earthworms (Eisenia fetida) either alone or in combination. Results demonstrated antagonistic interactions between AM fungi and PGPR or between AM fungi and earthworms on the growth of mycorrhizal plants by increasing the availability of both phosphorus (P) and Pb in the soil solution and the subsequent reduction of mycorrhizal root colonization following inoculation of PGPR or earthworms. Plant biomass was negatively correlated with soil-available Pb, but positively with the percentage of root colonization by AM fungi. Additionally, mycorrhizal root colonization was negatively correlated with soil-available P and Pb concentrations. The triple inoculation of AM fungi with PGPR and epigeic earthworms as a bioaugmentation tool could result in a synergistic interaction effect on plant Pb bioaccumulation and uptake, enhancing the efficiency of phytoremediation and eco-restoration of Pb-polluted sites. In conclusion, the use of Bermuda grass in association with functionally dissimilar soil organisms demonstrated a high effectiveness for Pb in situ phytoremediation, specifically Pb phytostabilization, to reduce Pb mobilization in the environment.

Projecting impacts of climate change on metal mobilization at contaminated sites: Controls by the groundwater level

Heavy metal and metalloid contamination of topsoils from atmospheric deposition and release from landfills, agriculture, and industries is a widespread problem that is estimated to affect >50% of the EU's land surface. Influx of contaminants from soil to groundwater and their further downstream spread and impact on drinking water quality constitute a main exposure risk to humans. There is increasing concern that the present contaminant loading of groundwater and surface water systems may be altered, and potentially aggravated, by ongoing climate change, through large-scale impacts on recharge and groundwater levels. We investigated this issue by performing hydrogeological-geochemical model projections of changes in metal(loid) (As and Pb) mobilization in response to possible (climate-driven) future shifts in groundwater level and fluctuation amplitudes. We used observed initial conditions and boundary conditions for contaminated soils in the temperate climate zone. The results showed that relatively modest increases (0.2 m) in average levels of shallow groundwater systems, which may occur in Northern Europe within the coming two decades, can increase mass flows of metals through groundwater by a factor of 2-10. There is a similar risk of increased metal mobilization in regions subject to increased (seasonal or event-scale) amplitude of groundwater levels fluctuations. Neglecting groundwater level dynamics in predictive models can thus lead to considerable and systematic underestimation of metal mobilization and future changes. More generally, our results suggest that the key to quantifying impacts of climate change on metal mobilization is to understand how the contact between groundwater and the highly water-conducting and geochemically heterogeneous topsoil layers will change in the future.

Functionally dissimilar soil organisms improve growth and Pb/Zn uptake by Stachys inflata grown in a calcareous soil highly polluted with mining activities

Micro- and macro-organisms are key components of sustainable soil-plant systems; and are involved in plant growth stimulation and accumulation of heavy metals in the plant, with great contribution to phytoremediation of heavy metal-contaminated soils. However, the combined effect of arbuscular mycorrhizal fungi (AMF), plant growth-promoting rhizobacteria (PGPR) and earthworms on plant growth and metal uptake is not yet clear. The main objective of this study was to examine the combined influences of these soil organisms on the growth and metal uptake by a native plant species (Stachys inflata), and subsequently on potential phytoremediation in a soil highly polluted with Pb/Zn mining activities. Metal tolerant AMF, PGPR and earthworms were used either alone or in combination in a factorial pot experiment under greenhouse conditions for 4 months. Inoculation of AMF, PGPR and earthworm led to an increase of soil Pb/Zn availability with the greatest Zn availability (about 2 times) with triple inoculation of all the organisms and the highest Pb availability (about 3 times) with co-inoculation of PGPR and earthworms. Triple inoculation of soil organisms increased the total plant biomass 3 times, total Pb uptake 6 times and total Zn uptake 5 times as compared with the uninoculated plants. The growth-stimulating effect of combined soil organisms was much greater than that of individual or dually-inoculated organisms. These results showed that it is possible to use the combination of metal-tolerant soil organisms as a potential bioaugmentation tool to accelerate metal phytoremediation rate in calcareous soils polluted by Pb/Zn mining activity under arid conditions. This could occur as a consequence of the synergistic effects of AMF, PGPR and earthworms on metal availability in the soil, S. inflata growth, metal tolerance and uptake. However, it would practically require more than hundreds of cropping cycles (360 for Pb and 250 for Zn) to achieve metal maximum permissible limits under the conditions of this pot experiment.

Assessment of the environmental impacts of ocean acidification (OA) and carbon capture and storage (CCS) leaks using the amphipod Hyale youngi

This study aims to ascertain the effects of CO₂ induced water acidification and leaks from Carbon Capture and Storage activities on the South American amphipod Hyale youngi. A 10-day acute toxicity test was performed using sediments from two sites located inside the Santos Estuarine System. They were subjected to five pH treatments (8.1, 7.6, 7.0, 6.5, and 6.0). Metals (Cd, Cu, Cr, Pb, Ni and Zn) and the metalloid As were analyzed to determine the influence of their acidification-related mobility on the amphipods mortality. The results showed that mortality becomes significant when compared to control in pH 6.5 in the Canal de Piaçaguera sediment (contaminated) and at pH 6.0 in Ilha das Palmas sediment (reference).

The effect of pH, electrolytes and temperature on the rhizosphere geochemistry of phytosiderophores

BACKGROUND AND AIMS

Graminaceous plants are grown worldwide as staple crops under a variety of climatic and soil conditions. They release phytosiderophores for Fe acquisition (Strategy II). Aim of the present study was to uncover how the rhizosphere pH, background electrolyte and temperature affect the mobilization of Fe and other metals from soil by phytosiderophores.

METHODS

For this purpose a series of kinetic batch interaction experiments with the phytosiderophore 2'-deoxymugineic acid (DMA), a calcareous clay soil and a mildly acidic sandy soil were performed. The temperature, electrolyte concentration and applied electrolyte cation were varied. The effect of pH was examined by applying two levels of lime and Cu to the acidic soil.

RESULTS

Fe mobilization by DMA increased by lime application, and was negatively affected by Cu amendment. Mobilization of Fe and other metals decreased with increasing ionic strength, and was lower for divalent than for monovalent electrolyte cations at equal ionic strength, due to higher adsorption of metal-DMA complexes to the soil. Metal mobilization rates increased with increasing temperature leading to a faster onset of competition; Fe was mobilized faster, but also became depleted faster at higher temperature. Temperature also affected biodegradation rates of metal-DMA complexes.

CONCLUSION

Rhizosphere pH, electrolyte type and concentration and temperature can have a pronounced effect on Strategy II Fe acquisition by affecting the time and concentration 'window of Fe uptake' in which plants can benefit from phytosiderophore-mediated Fe uptake.

Experimental considerations in metal mobilization from soil by chelating ligands: The influence of soil-solution ratio and pre-equilibration - A case study on Fe acquisition by phytosiderophores

The efficiency of chelating ligands in mobilizing metals from soils and sediments is generally examined under conditions remote from those under which they are exuded or applied in the field. This may lead to incorrect estimations of the mobilizing efficiency. The aim of this study was to establish the influence of the soil solution ratio (SSR) and pre-equilibration with electrolyte solution on metal mobilization and metal displacement. For this purpose a series of interaction experiments with a calcareous clay soil and a biogenic chelating agent, the phytosiderophore 2'-deoxymugineic acid (DMA) were carried out. For a fixed ligand concentration, the SSR had a strong influence on metal mobilization and displacement. Metal complexation was faster at higher SSR. Reactive pools of metals that were predominantly mobilized at SSR 6 (in this case Cu), became depleted at SSR 0.1, whereas metals that were marginally mobilized at SSR 6, were dominantly mobilized at SSR 0.1 (in this case Fe), because of large soil reactive pools. For a fixed "amount of ligand"-to-"amount of soil"-ratio, metal complexation scaled linearly with the SSR. The efficiency of ligands in mobilizing metals under field conditions can be predicted with batch experiments, as long as the ligand-to-soil-ratio is matched. In most previously reported studies this criterion was not met. Equivalent metal-complex concentrations under field conditions can be back-calculated using adsorption isotherms for the respective metal-complexes. Drying and dry storage created labile pools of Fe, Cu and Zn, which were rapidly mobilized upon addition of DMA solution to dry soil. Pre-equilibration decreased these labile pools, leading to smaller concentrations of these metals during initial mobilization, but did not reduce the lag time between ligand addition and onset of microbial degradation of the metal-complexes. Hence SSR and pre-equilibration should be carefully considered when testing the metal mobilizing efficiency of chelating ligands.

Metal release from contaminated coastal sediments under changing pH conditions: Implications for metal mobilization in acidified oceans

To investigate the impacts and processes of CO2-induced acidification on metal mobilization, laboratory-scale experiments were performed, simulating the scenarios where carbon dioxide was injected into sediment-seawater layers inside non-pressurized chambers. Coastal sediments were sampled from two sites with different contamination levels and subjected to pre-determined pH conditions. Sediment samples and overlying water were collected for metal analysis after 10-days. The results indicated that CO2-induced ocean acidification would provoke increased metal mobilization causing adverse side-effects on water quality. The mobility of metals from sediment to the overlying seawater was correlated with the reduction in pH. Results of sequential extractions of sediments illustrated that exchangeable metal forms were the dominant source of mobile metals. Collectively, our data revealed that high metal concentrations in overlying seawater released from contaminated sediments under acidic conditions may strengthen the existing contamination gradients in Maluan Bay and represent a potential risk to ecosystem health in coastal environments.

Evaluation of metal partitioning and mobility in a sulfidic mine tailing pile under oxic and anoxic conditions

Mining-influenced water emanating from mine tailings and potentially contaminating surface water and groundwater is one of the most important environmental issues linked to the mining industry. In this study, two subsets of Callahan Mine tailings (mainly comprised of silicates, sulfides, and carbonates) were collected using sealed containers, which allowed keeping the samples under anoxic conditions during transportation and storage. Among the potential contaminants, in spite of high concentrations of Cu, Mn, Pb, and Zn present in the solid mine tailings, only small amounts of Mn and Zn were found in the overlying pore water. The samples were subjected to leaching tests at different reduction-oxidation (redox) conditions to compare metal and S mobilization under oxic and anoxic conditions. It was observed that Cd, Cu, Mn, Pb, S, and Zn were mobilized at higher rates under oxic conditions, while Fe was mobilized at a higher rate under anoxic conditions in comparable constant pH experiments. These results suggest that metal mobilization is significantly impacted by redox conditions. When anoxic metal mobilization assessment is required, it is recommended to always maintain anoxic conditions because oxygen exposure may affect metal mobilization. A sequential extraction performed under oxic conditions revealed that most of the metals in the samples were associated with the sulfidic fraction and that the labile fraction was associated with Mn and moderate amounts of Pb and Zn.

Metal mobilization under alkaline conditions in ash-covered tailings

The aim of this study was to determine element mobilization and accumulation in mill tailings under alkaline conditions. The tailings were covered with 50 cm of fly ash, and above a sludge layer. The tailings were geochemically and mineralogically investigated. Sulfides, such as pyrrhotite, sphalerite and galena along with gangue minerals such as dolomite, calcite, micas, chlorite, epidote, Mn-pyroxene and rhodonite were identified in the unoxidized tailings. The dissolution of the fly ash layer resulted in a high pH (close to 12) in the underlying tailings. This, together with the presence of organic matter, increased the weathering of the tailings and mobilization of elements in the uppermost 47 cm of the tailings. All primary minerals were depleted, except quartz and feldspar which were covered by blurry secondary carbonates. Sulfide-associated elements such as Cd, Fe, Pb, S and Zn and silicate-associated elements such as Fe, Mg and Mn were released from the depletion zone and accumulated deeper down in the tailings where the pH decreased to circum-neutral. Sequential extraction suggests that Cd, Cu, Fe, Pb, S and Zn were retained deeper down in the tailings and were mainly associated with the sulfide phase. Calcium, Cr, K and Ni released from the ash layer were accumulated in the uppermost depletion zone of the tailings.

Metal mobilization from soils by phytosiderophores - experiment and equilibrium modeling

AIMS

To test if multi-surface models can provide a soil-specific prediction of metal mobilization by phytosiderophores (PS) based on the characteristics of individual soils.

METHODS

Mechanistic multi-surface chemical equilibrium modeling was applied for obtaining soil-specific predictions of metal and PS speciation upon interaction of the PS 2'-deoxymugineic acid (DMA) with 6 soils differing in availability of Fe and other metals. Results from multi-surface modeling were compared with empirical data from soil interaction experiments.

RESULTS

For soils in which equilibrium was reached during the interaction experiment, multi-surface models could well predict PS equilibrium speciation. However, in uncontaminated calcareous soils, equilibrium was not reached within a week, and experimental and modeled DMA speciation differed considerably. In soils with circum-neutral pH, on which Fe deficiency is likely to occur, no substantial Fe mobilization by DMA was predicted. However, in all but the contaminated soils, Fe mobilization by DMA was observed experimentally. Cu and Ni were the quantitatively most important metals competing with Fe for complexation and mobilization by DMA.

CONCLUSION

Thermodynamics are unable to explain the role of PS as Fe carrier in calcareous soils, and the kinetic aspects of metal mobilization by PS need to be closer examined in order to understand the mechanisms underlying strategy II Fe acquisition.