Grazing alters the soil nematode communities in grasslands: A meta-analysis

Grazing causes great disturbances in grassland ecosystems and may change the abundance, diversity, and ecological function of soil biota. Because of their important role in nutrient cycling and as good environmental indicators, nematodes are very representative soil organisms. However, the mechanisms by which grazing intensity, livestock type, duration, and environmental factors (e.g., climate and edaphic factors) affect soil nematodes remain poorly understood. In this study, we collected 1964 paired observations all over the world from 53 studies to clarify the grazing response patterns of soil nematodes and their potential mechanisms. Overall, grazing significantly decreased the abundance of bacterial-feeding (BF) nematodes (-16.54%) and omnivorous-predatory (OP) nematodes (-36.81%), and decreased nematode community diversity indices (Shannon-Weiner index: -4.33%, evenness index: -9.22%, species richness: -5.35%), but had no effect on ecological indices under a global regional scale. The response of soil nematodes to grazing varied by grazing intensity, animals, and duration. Heavy grazing decreased OP nematode abundance, but had no effect on the abundance of other trophic groups, or on diversity or ecological indices. Grazing by small animals had stronger effects than that by large animals and mixed-size animals on BF, fungal-feeding (FF), plant-feeding (PF) and OP nematodes, the Shannon-Wiener index, and the species richness index. The abundance of FF and OP nematodes influenced significantly under short-term grazing. The evenness index decreased significantly under long-term grazing (>10 years). Climate and edaphic factors impacted the effects of grazing on nematode abundance, diversity, and ecological indices. When resources (i.e., rain, heat, and soil nutrients) were abundant, the negative effects of grazing on nematodes were reduced; under sufficiently abundant resources, grazing even had positive effects on soil nematode communities. Thus, the influence of grazing on soil nematode communities is resource-dependent. Our study provides decision makers with grazing strategies based on the resource abundance. Resource-poor areas should have less grazing, while resource-rich areas should have more grazing to conserve soil biodiversity and maintain soil health.

Litter Additions Reduce the Side Effects of Biocides on Soil Nematode Communities in Illicium Verum Forest

The application of biocides may create unintended consequences on soil biota and ecosystem stability. The inputs of organic matter can increase biocides adsorption and reduction of non-target organisms influence. A field experiment was conducted to study the changes of soil abiotic and nematode communities resulting from biocides application in non-litter-added and litter-added soils in Illicium verum forest. Our results showed that litter addition could change the responses of soil nematodes to biocides. The influence of fungicide was evident mainly in litter-added plots in which it increased nematode abundance. Insecticide and its interaction with fungicide significantly decreased the diversity index and the abundance of omnivores-predators and herbivores in non-litter-added plots. While, insecticide had little effect on nematode diversity and abundance in litter-added plots. Litter addition may help to maintain the structure and stability of soil food web and result in bacteria dominant decomposition pathway. Our results suggest that litter addition may be a critical factor for maintaining soil ecosystem stability when biocides are applied in Illicium verum forest.

Responses of soil nematode community within soil aggregates to tea plantation age

It is increasingly believed that soil nematodes play an important role in the soil community and have a pronounced influence on the evaluation of soil health and the monitoring of soil food web changes. Soil aggregates provide habitable pore space and resource availability for soil organisms. The distribution of soil nematodes, which are relatively small soil fauna, may be related to the degree of soil aggregates. Soil nematode communities were studied with different soil components: large macro-aggregates (> 2 mm), medium macro-aggregates (2-1 mm), small macro-aggregates (1-0.25 mm), and micro-aggregates (< 0.25 mm) extracted from the same crop variety plantings (Sichuan tea) of different ages (19 years, 26 years, 34 years, and 56 years) in Sichuan province, southwestern China, in 2018. The results showed that the tea plantation with 26 years of cultivation was more suitable for the propagation of nematode communities, and the numbers of total nematodes were highest in the > 2 mm fractions. Compared with other tea plantations, the Margalef index (SR) of 26-year-old tea plantation was significantly higher than that within the large and medium macro-aggregates, and the maturity index (MI) was higher in the large and small macro-aggregates in the 26-year-old tea plantation. In the large macro-aggregates, the value of functional metabolic footprints decreased with the tea plantation age. In addition, the functional metabolic footprints increased with the increase in soil aggregate size. Our finding suggests that nematode communities are limited by resource availability and resource quality played an important role in determining nematode communities. Moreover, the soil food web was degenerated with the age of tea cultivation. Therefore, in the study area, it is necessary to pay attention to the rational allocation and application of organic fertilizer in the late stage of tea planting, so as to maintain the soil fertility and soil food web structure of the tea garden.

UV-filter octyl methoxycinnamate causes reproductive toxicity associated with germline apoptosis and vitellogenin decrease in Caenorhabditis elegans

Octyl methoxycinnamate (OMC) is a common UV filter found in personal care products such as sunscreen and cosmetics. However, OMC's presence in wastewater has raised concerns that it could potentially pollute aquatic ecosystems because of its limited biodegradability and its estrogenic disrupting properties. In this study, we investigated the environmental toxicity of OMC and its potential biomarkers using the nematode Caenorhabditis elegans. Our results showed that body length, eggs in utero, and total brood size decreased with increasing dose (experimental concentrations = 0, 1, 5, 10, 100, 500 μM for body length and eggs in utero, and 0, 5, 10 μM for total brood size) in C. elegans after L1 larval stage (the first larval stage for 0 - 12 hours post-hatching) larval stage exposure to OMC. The minimum effective concentrations were 1, 5, and 10 μM, respectively. Modeling results demonstrated that the threshold concentration of OMC inducing 10% inhibited eggs in utero was 0.33 μM (95.11 μg/L). Furthermore, germline apoptosis was induced in 10 μM OMC-treated worms (experimental concentrations = 0, 5, 10 μM). Decreased mRNA levels of vitellogenin-related genes (vit-2 and vit-6) and increased mRNA levels of apoptosis-related genes (egl-1 and ced-3) were observed in 10 μM OMC-treated C. elegans (experimental concentrations = 0, 10 μM), suggesting that reproductive toxicity was associated with decreased vitellogenin levels and germline apoptosis. In summary, our study shows that OMC is reproductively toxic and leads to reduced egg formation and decreased brood size in C. elegans by reducing vitellogenin levels and promoting germline apoptosis.

Soil Nematodes as the Silent Sufferers of Climate-Induced Toxicity: Analysing the Outcomes of Their Interactions with Climatic Stress Factors on Land Cover and Agricultural Production

Unsustainable anthropogenic activities over the last few decades have resulted in alterations of the global climate. It can be perceived through changes in the rainfall patterns and rise in mean annual temperatures. Climatic stress factors exert their effects on soil health mainly by modifying the soil microenvironments where the soil fauna reside. Among the members of soil fauna, the soil nematodes have been found to be sensitive to these stress factors primarily because of their low tolerance limits. Additionally, because of their higher and diverse trophic positions in the soil food web they can integrate the effects of many stress factors acting together. This is important because under natural conditions the climatic stress factors do not exert their effect individually. Rather, they interact amongst themselves and other abiotic stress factors in the soil to generate their impacts. Some of these interactions may be synergistic while others may be antagonistic. As such, it becomes very difficult to assess their impacts on soil health by simply analysing the physicochemical properties of soil. This makes soil nematodes outstanding candidates for studying the effects of climatic stress factors on soil biology. The knowledge obtained therefrom can be used to design sustainable agricultural practices because most of the conventional techniques aim at short-term benefits with complete disregard of soil biology. This can partly ensure food security in the coming decades for the expanding population. Moreover, understanding soil biology can help to preserve landscapes that have developed over long periods of climatic stability and belowground soil biota interactions.

Lipidomic alteration and stress-defense mechanism of soil nematode Caenorhabditis elegans in response to extremely low-frequency electromagnetic field exposure

To assess the impacts of man-made extremely low-frequency electromagnetic field (ELF-EMF) on soil ecosystems, the soil nematode was applied as a biological indicator to characterize ecotoxicity of ELF-EMF. In this paper, a soil-living model organism, Caenorhabditis elegans (C. elegans) was exposed to 50 Hz, 3 mT ELF-EMF. The integrated lipidome, proteome and transcriptome analysis were applied to elucidate physiological acclimations. Lipidomic analysis showed that ELF-EMF exposure induced significant alterations of 64 lipids, including significant elevation of triacylglycerols (TGs). Proteome results implied 157 changed protein expressions under ELF-EMF exposure. By transcriptomic analysis, 456 differently expressed genes were identified. Gene Ontology (GO) function and pathway analyses showed lipidomic alteration, mitochondrial dysfunction and the stress defense responses following ELF-EMF exposure in C. elegans. Conjoint analysis of proteome and transcriptome data showed that a higher expression of genes (sip-1, mtl-1 and rpl-11.1, etc.) were involved in stress defense responses to ELF-EMF exposure. These results indicated that ELF-EMF can induce effects on soil nematodes, mainly through disturbing lipid metabolism such as increasing TGs content, and eliciting stress defense responses. This study provided a new understanding in ELF-EMF exposure effects on soil nematodes and suggested a potential way of interpreting ELF-EMF influences on soil ecosystems.

Soil ecotoxicity study of DEHP with respect to multiple soil species

Di (2-ethylhexyl) phthalate or DEHP is classified as an endocrine-disrupting chemical. It is used as a plasticizer and pesticide additive. Moreover, it has a half-life of about 150-300 days. Thus, it is present in the soil environment and soil risk assessments for DEHP are needed. However, a number of studies have focused on the effects of DEHP in a single soil species. In this study, we conducted acute and chronic toxicity testing for DEHP using varied soil species, including plants, earthworms, soil algae, Collembola, and soil nematodes. In the plant toxicity test, no effect was observed at very high concentration except at some endpoints, and no effect was observed in the earthworm toxicity test. However, there were adverse effects on soil algae, Collembola, and nematodes. Notably, in the Collembola assays, the survival of adults decreased significantly at very high concentrations, whereas reproduction was hindered at low concentrations. Similar inhibition of reproduction was noted in the soil nematode assay. This suggests that DEHP has a greater influence on fertility than survival in the adult test species. However, besides hindered reproduction, no effect was observed on soil species at environmentally relevant concentrations.

Variability in responses of soil nematodes to trace element contamination

Free-living soil nematodes and plant parasites were previously repeatedly tested for their use as bioindicators of soil contamination. We investigated soil nematode communities from grasslands in four different industrial areas in Slovakia to estimate their responses to heavy metals. We considered differences or similarities in behavioural reactions of nematodes to different quantities of selected heavy metals in the soil. Using the CCA analysis and t-value biplot diagrams with van Dobben circles, we split individual nematode genera by their tolerance/intolerance to the particular heavy metal into several clusters. Our results showed that (a) representatives of nematode genera showed concurrently positive and negative associations with two or more heavy metals, (b) most nematode genera expressed a strong positive relation with Ni and to a lesser extend with Cr and Zn, (c) taxonomically closely related nematodes did not demonstrated similar responses to the same pollutant. We assume that nematode genera with a higher level of tolerance to trace elements should be prioritized in the heavy metal bioindication instead of sensitive species, due to their longer persistence in the stressed environment and better indicative ability. We pointed nematode genera, which according to received results may serve as suitable sentinels for specific soil pollutants.

Antibacterial, Antifungal and Nematicidal Activities of Rare Earth Ions

Despite the name, rare earth elements are relatively abundant in soil. Therefore, these elements might interact with biosphere during the history of life. In this study, we have examined the effect of rare earth ions on the growth of bacteria, fungi and soil nematode. All rare earth ions, except radioactive promethium that we have not tested, showed antibacterial and antifungal activities comparable to that of copper ions, which is widely used as antibacterial metals in our daily life. Rare earth ions also have nematicidal activities as they strongly perturb the embryonic development of the nematode, Caenorhabditis elegans. Interestingly, the nematicidal activity increased with increasing atomic number of lanthanide ions. Since the rare earth ions did not show high toxicity to the human lymphoblastoid cell line or even stimulate the growth of the cultured cells at 1 mM, it raised the possibility that we can substitute rare earth elements for the antibacterial metals usually used because of their safety.

Towards multi-level biomonitoring of nematodes to assess risk of nitrogen and phosphorus pollution in Jinchuan Wetland of Northeast China

Cultivation for agricultural production often poses threats to nearby wetlands ecosystems in fertile landscapes. In this study, nematode ecological indexes were assessed through the main soil properties of the wetlands, farmlands, and edges of wetlands and farmlands in Jinchuan Wetland by the random sampling. Behavior and reproduction in Caenorhabditis elegans (C. elegans) exposed to the sampled waters were also examined. Stress proteins Hsp70 and Hsp90 were measured both in the living field samples of C. elegans and the lab-tested C. elegans. Our results suggested that disturbance to wetland ecosystems by nitrogen and phosphorus reduced nematode richness and proportions of bacterivore nematodes. Bacterivore nematode diversity and plant-parasitic ecological index were proven to be sensitive indicators of the ecological health of wetlands. Nematode Hsp70 were useful biosensors to monitor and assess the levels of nitrogen and phosphorus pollutions in wetlands. Furthermore, multi-level soil faunal assessments by canonical correspondence analysis showed that Jinchuan Wetland is threatened with non-point source pollution from nearby farmlands.

The effects of the presence of Bt-transgenic oilseed rape in wild mustard populations on the rhizosphere nematode and microbial communities

The adventitious presence of transgenic crops in wild plant populations is of ecological and regulatory concern. In this context, their effects on non-target, below-ground organisms are not well understood. Here, we introduced, at various frequencies, Bt-transgenic oilseed rape (OSR, Brassica napus) into wild mustard (Brassica juncea) populations in the presence and absence of the target herbivore (Plutella xylostella). The impacts on soil nematode and microbial communities were assessed in this system. There were no significant changes on the number of nematode genera and abundance in proportions of OSR with mustard. Nonetheless, the Shannon-Wiener and Pielou evenness index was lowest in plant stands containing 50% of Bt-transgenic OSR. Among treatments, there was no significant variation for culturable soil microbes. There was a positive association between foliar herbivory and the abundance of plant parasitic (PP) and cp-3 nematodes, whereas there was no association between herbivory and soil microbial populations. There was no direct effects of the presence of Bt-transgenic OSR in wild mustard populations on the rhizosphere nematode and microbial communities, whereas its indirect effects via aboveground herbivory might be important to consider for biosafety assessments.