Abundance, biomass and species richness of macrozoobenthos along an intertidal elevation gradient

Ecology aims to comprehend species distribution and its interaction with environmental factors, from global to local scales. While global environmental changes affect marine biodiversity, understanding the drivers at smaller scales remains crucial. Tidal flats can be found on most of the world's coastlines and are particularly vulnerable to anthropogenic disturbances. They are important transient ecosystems between terrestrial and marine ecosystems, and their biodiversity provides important ecosystem services. Owing to this unique, terrestrial-marine transition, strong environmental gradients of elevation, sediment composition and food availability prevail. Here, we investigated which regional and local environmental factors drive the spatio-temporal dynamics of macrozoobenthos communities on back-barrier tidal flats in the East Frisian Wadden Sea. On the regional level, we found that species composition changed significantly from west to east on the East Frisian islands and that total abundance and species richness decreased from west to east. On the local abiotic level, we found that macrozoobenthos biomass decreased with higher elevation towards the salt marsh and that the total abundance of organisms in the sediment significantly increased with increasing mud content, while biodiversity and biomass were not changing significantly. In contrast to expectations, increasing Chl a availability as a measure of primary productivity did not result in changes in abundance, biomass or biodiversity, but extremely high total organic carbon (TOC) content was associated with a decrease in biomass and biodiversity. In conclusion, we found regional and local relationships that are similar to those observed in previous studies on macrozoobenthos in the Wadden Sea. Macrozoobenthos biomass, abundance and biodiversity are interrelated in a complex way with the physical, abiotic and biotic processes in and above the sediment.

Feeding effects of the keystone deposit feeder Ilyanassa obsoleta (Neogastropoda, Gastropoda) on sedimentary diatoms

Microphytobenthos (MPB), typically comprised mainly of diatoms, is a key contributor to nearshore energy flow and nutrient cycles. Deposit-feeding invertebrates are known to alter the structure and activity of MPB. The eastern mud snail Ilyanassa obsoleta can reach extremely high densities in estuaries of the northwestern Atlantic, and their deposit-feeding and locomotion strongly influence other invertebrates and microbes. Our objective was to explore quantitative and qualitative effects of this keystone deposit-feeder on diatoms of intertidal sediments. We gathered snails from mudflat and sandflat habitats and collected their fresh fecal pellets in the laboratory. DNA metabarcoding allowed us to characterize diatom assemblages of ingested sediments and feces. We noted selective feeding such that reduction in MPB biomass with gut passage was difficult to quantify. Diatom α-diversity was reduced with gut passage in snails from both sedimentary regimes. Mudflat and sandflat diatom assemblages were distinct and differed markedly between feces and sediment in mud-feeding snails, whereas the difference in sand-feeding snails was minor. The sandy habitat was dominated by a mix of epipelic and epipsammic diatoms. In contrast, mudflat samples were dominated by epipelic and planktonic diatoms. Compositional differences between sediment and feces reflected preferential removal of planktonic taxa. Our results suggest the importance of phytodetritus to the mud snail diet, particularly in hydrodynamically quiescent environments. Due to the natural spatial patchiness of the snails and the capacity for rapid microbial recolonization, field experiments are recommended to determine whether MPB community changes attributed to gut passage are manifested at the landscape scale.

Assessment of the Chronic Toxicity and Interactions between Arsenic and Riverbed Biofilms

The toxic effect of exposure to arsenic, As(V), at concentrations of 0 to 30 mg L^-1, for 49 days, on epipsammic biofilms, was evaluated in a microcosm experiment. The growth and composition of biofilms developed on sediments containing As concentrations of 31 mg kg^-1 and 85 mg kg^-1 were compared, using photosynthetic parameters and Live/Dead stains as end points. A toxic effect of arsenic could not be demonstrated; however, biofilm growth was higher over the sediment with higher arsenic concentrations, suggesting the development of pollution-induced community induced tolerance (PICT). Nevertheless, PICT was not observed after exposure to high arsenic concentration in the laboratory, as there were no differences in algal growth between the previous 0 and 30 mg L^-1 systems exposed to new 30 mg As L^-1 dissolution over 29 days. The algal composition was affected by the added arsenic, and brown algae were the most tolerant compared to green algae and cyanophyceae, as their percentage increased from 25 and 33% in the control samples to 57 and 47% in the samples with the highest added As concentration. In turn, the biofilm development influenced arsenic redistribution and speciation. Arsenic concentration in water decreased with time during the incubation experiment, retained by the sediment particles and the biofilm. In the biofilm, extracellular As was significantly higher (up to 11 times) than intracellular arsenic. As(V) was the predominant species in water and in the biofilm, but products of biotic transformation, namely As(III), DMA(V) and MMA(V), were also found in the solution and in the biofilm in some systems, demonstrating reduction and methylation by the organisms. As a conclusion, a toxic effect was not detected for the concentrations evaluated. Biofilms naturally exposed in the river system to high As concentrations acquire pollution-induced tolerance; however, tolerance was not acquired by exposure to 30 mg L^-1 for 29 days in the laboratory.

Nitrogen Fixation Influenced by Phosphorus and Nitrogen Availability in the Benthic Bloom-forming Cyanobacterium Hydrocoleum sp. Identified in a Temperate Marine Lagoon

The nitrogen-fixing, non-heterocystous cyanobacterium Hydrocoleum sp. (Oscillatoriales) is a common epiphytic and benthic bloom-former in tropical and subtropical shallow water systems but shares high phylogenetic similarity with the planktonic, globally important diazotroph Trichodesmium. Multiphasic observations in this study resulted in unexpected identification of Hydrocoleum sp. in mass accumulations in a coastal lagoon in the Western temperate North Atlantic Ocean. Hydrocoleum physiology was examined in situ through measurements of N₂ and CO₂ fixation rates and expression of genes involved with N₂ fixation, CO₂ fixation, and phosphorus (P) stress. Bulk N₂ fixation rates and Hydrocoleum nifH expression peaked at night and were strongly suppressed by dissolved inorganic nitrogen (DIN). The expression of high affinity phosphate transporter (pstS) and alkaline phosphatase (phoA) genes of Hydrocoleum was elevated during the night and negatively responded to phosphate amendments, as evidence that these mechanisms contribute to P acquisition during diazotrophic growth of Hydrocoleum in situ. This discovery at the edge of the previously known Hydrocoleum habitat range in the warming oceans raises intriguing questions about diazotrophic cyanobacterial adaptations and transitions on the benthic-pelagic continuum.

Colonisation of artificial structures by primary producers: competition and photosynthetic behaviour

Colonisation of artificial structures by primary producers is an important determinant for eco-engineering projects. In this context, interactions between the colonisation by microphytobenthic biofilm and macroalgae were explored on 48 samples of marine infrastructures (MI) immersed for one year in the English Channel. Marine infrastructures samples with smooth and rough surface were compared to evaluate the influence of surface micro-scale rugosity. Microphytobenthos biomass (MPB), macroalgal diversity and photosynthetic parameters of both were assessed during colonisation. No significant differences were found as a function of the surface rugosity of MI samples, which was unexpected, but can be explained by biogenic rugosity provided by barnacles. Marine infrastructures were largely colonised by a red encrusting alga, Phymatolithon purpureum, which showed poor photosynthetic capacity compared to the microphytobenthos present next to it. Colonisation by monospecific encrusting algae tended to reduce the primary productivity of hard substrate.

Prevalence of okadaic acid in benthic organisms associated Prorocentrum lima complex in a sub-tropical estuary

Lipophilic toxins were investigated in different benthic compartments of Paranaguá Bay, southern Brazil. Relatively low concentrations of okadaic acid (OA) were frequently reported in macrophyte extracts (maximum 0.64 ng g^-1), mainly in sheltered estuarine areas, correlated with the cell abundance of toxigenic benthic dinoflagellates, Prorocentrum lima. Non-conjugated OA was also detected in benthic marine animals, mostly during summer-autumn 2016. Higher OA concentrations were found in the viscera of Genidens genidens fish (24.3 ± 3.7 ng g^-1) and in soft tissues of Mytella guyanensis bivalves (21.3 ± 2.13 ng g^-1), whereas lower levels were less frequently reported in many other benthic feeders, including cephalopods, gastropods, crustaceans and fishes. Although OA concentrations were below the levels associated with acute human intoxication, possible chronic effects to benthic animals and their consumers cannot be disregarded due to the frequent presence of this biotoxin in various fishery resources. Human health risks are substantially enhanced for small-scale fishing communities and other socioeconomically vulnerable populations.

Biological Invasion of Fish Parasite Neoergasilus japonicus (Harada, 1930) (Copepoda: Ergasilidae) in Lake Grand Laoucien, France: A Field Study on Life Cycle Parameters and Reasons for Unusual High Population Density

The fish parasite, Neoergasilus japonicus (Harada, 1930), native to Eastern Siberia and the Amur River catchment area, invaded European water bodies in the middle of the last century, possibly due to the human-mediated distribution of fish in the Amur complex (i.e., the genera Hypophthalmichthys and Ctenopharyngodon). In the deep karst lake, Grand Laoucien (Marseille area, France), this species had an unusually high population density (from 1000 ind./ m³ in zooplankton to 4000 ind./ m³ in the nearshore area) during the free-living period of its life cycle. The annual cycle of N. japonicus includes a 5-month overwintering of fertilized females attached to fish fins and, following this, a five- to six-generation chain from March to November, when the free-living stages in the population alternate with parasite females which attach to their hosts for breeding. The population density of the parasites in zooplankton increased exponentially from spring to autumn, which positively correlated with temperature. We found a strong correlation between N. japonicus density and the community development of microphytobenthos, but not between N. japonicus and phyto- or zooplankton dynamics. The local contributing factors included a seasonal three-fold decrease in water levels and the development of anoxia in profundal waters, which led to a high ambient fish density and thus susceptibility to the parasite. Although the free-living parasite represented only 1% of zooplankton production, it consumed up to 25% of small invertebrate productivity. The maximum intensity of infection reached 140 parasites per fish, or 4.14 per g of weight. The high infection of fish with this parasite, in our opinion, indicated the danger it poses to the local ichthyofauna, which first encountered this new parasite.

Advection Drives Nitrate Past the Microphytobenthos in Intertidal Sands, Fueling Deeper Denitrification

Nitrification rates are low in permeable intertidal sand flats such that the water column is the primary source of nitrate to the sediment. During tidal inundation, nitrate is supplied to the pore space by advection rather than diffusion, relieving the microorganisms that reside in the sand from nitrate limitation and supporting higher denitrification rates than those observed under diffusive transport. Sand flats are also home to an abundant community of benthic photosynthetic microorganisms, the microphytobenthos (MPB). Diatoms are an important component of the MPB that can take up and store high concentrations of nitrate within their cells, giving them the potential to alter nitrate availability in the surrounding porewater. We tested whether nitrate uptake by the MPB near the sediment surface decreases its availability to denitrifiers along deeper porewater flow paths. In laboratory experiments, we used NO_x (nitrate + nitrite) microbiosensors to confirm that, in the spring, net NO_x consumption in the zone of MPB photosynthetic activity was stimulated by light. The maximum potential denitrification rate, measured at high spatial resolution using microsensors with acetylene and nitrate added, occurred below 1.4 cm, much deeper than light-induced NO_x uptake (0.13 cm). Therefore, the shallower MPB had the potential to decrease NO_x supply to the deeper sediments and limit denitrification. However, when applying a realistic downward advective flow to sediment from our study site, NO_x always reached the depths of maximum denitrification potential, regardless of light availability or season. We conclude that during tidal inundation porewater advection overwhelms any influence of shallow NO_x uptake by the MPB and drives water column NO_x to the depths of maximum denitrification potential.

Denitrification, Nitrogen Uptake, and Organic Matter Quality Undergo Different Seasonality in Sandy and Muddy Sediments of a Turbid Estuary

The interaction between microbial communities and benthic algae as nitrogen (N) regulators in poorly illuminated sediments is scarcely investigated in the literature. The role of sediments as sources or sinks of N was analyzed in spring and summer in sandy and muddy sediments in a turbid freshwater estuary, the Curonian Lagoon, Lithuania. Seasonality in this ecosystem is strongly marked by phytoplankton community succession with diatoms dominating in spring and cyanobacteria dominating in summer. Fluxes of dissolved gas and inorganic N and rates of denitrification of water column nitrate (D_w) and of nitrate produced by nitrification (D_n) and sedimentary features, including the macromolecular quality of organic matter (OM), were measured. Shallow/sandy sites had benthic diatoms, while at deep/muddy sites, settled pelagic microalgae were found. The OM in surface sediments was always higher at muddy than at sandy sites, and biochemical analyses revealed that at muddy sites the OM nutritional value changed seasonally. In spring, sandy sediments were net autotrophic and retained N, while muddy sediments were net heterotrophic and displayed higher rates of denitrification, mostly sustained by D_w. In summer, benthic oxygen demand increased dramatically, whereas denitrification, mostly sustained by D_n, decreased in muddy and remained unchanged in sandy sediments. The ratio between denitrification and oxygen demand was significantly lower in sandy compared with muddy sediments and in summer compared with spring. Muddy sediments displayed seasonally distinct biochemical composition with a larger fraction of lipids coinciding with cyanobacteria blooms and a seasonal switch from inorganic N sink to source. Sandy sediments had similar composition in both seasons and retained inorganic N also in summer. Nitrogen uptake by microphytobenthos at sandy sites always exceeded the amount loss via denitrification, and benthic diatoms appeared to inhibit denitrification, even in the dark and under conditions of elevated N availability. In spring, denitrification attenuated N delivery from the estuary to the coastal area by nearly 35%. In summer, denitrification was comparable (~100%) with the much lower N export from the watershed, but N loss was probably offset by large rates of N-fixation.

Age- and sex-related dietary specialization facilitate seasonal resource partitioning in a migratory shorebird

Dietary specialization is common in animals and has important implications for individual fitness, inter- and intraspecific competition, and the adaptive potential of a species. Diet composition can be influenced by age- and sex-related factors including an individual's morphology, social status, and acquired skills; however, specialization may only be necessary when competition is intensified by high population densities or increased energetic demands.To better understand the role of age- and sex-related dietary specialization in facilitating seasonal resource partitioning, we inferred the contribution of biofilm, microphytobenthos, and benthic invertebrates to the diets of western sandpipers (Calidris mauri) from different demographic groups during mid-winter (January/February) and at the onset of the breeding migration (April) using stable isotope mixing models. Western sandpipers are sexually dimorphic with females having significantly greater body mass and bill length than males.Diet composition differed between seasons and among demographic groups. In winter, prey consumption was similar among demographic groups, but, in spring, diet composition differed with bill length and body mass explaining 31% of the total variation in diet composition. Epifaunal invertebrates made up a greater proportion of the diet in males which had lesser mass and shorter bills than females. Consumption of Polychaeta increased with increasing bill length and was greatest in adult females. In contrast, consumption of microphytobenthos, thought to be an important food source for migrating sandpipers, increased with decreasing bill length and was greatest in juvenile males.Our results provide the first evidence that age- and sex-related dietary specialization in western sandpipers facilitate seasonal resource partitioning that could reduce competition during spring at the onset of the breeding migration.Our study underscores the importance of examining resource partitioning throughout the annual cycle to inform fitness and demographic models and facilitate conservation efforts.

Ecological Engineering for the Optimisation of the Land-Based Marine Aquaculture of Coastal Shellfish

Whilst the demand for nutritious and sustainable seafood is increasing, fishing yields are declining due to overfishing and climate change. The inshore aquaculture of marine molluscs-e.g., the suspension-feeding cockle Cerastoderma edule for NW Europe-might be an alternative practice if cost-effective and nature-based technology enhances growth and survival. Our inshore experiments revealed that increasing the seawater residence time resulted in improved water quality. The reduction in sediment loads and stimulation of pelagic microalgal growth resulted in enhanced shell growth and meat content of the wild cockles seeded into the system. Shorter residence times resulted also in an increase in benthic microalgae, but the concurrent increase in silt content of the sediment appeared to hamper effective filtration by cockles. The growth conditions (with respect to the water and sediment quality) for the inshore cultivation of cockles can indeed be improved by means of ecological engineering, suggesting that the inshore aquaculture of marine shellfish can provide sustainable food and income for coastal communities, in particular when the shellfish farms are located in low-lying salinized coastal areas where common agriculture practices are no longer profitable. The involvement of the shellfishery industry was and will be crucial for studying and understanding the complex practice of cockle cultivation.

Contribution of unvegetated tidal flats to coastal carbon flux

Unvegetated flats occupy a large area in the intertidal zone. However, compared to vegetated areas, the carbon sequestration of unvegetated tidal flats is rarely quantified, even though these areas are highly threatened by human development and climate change. We determined benthic maximum gross primary production (GPP_m ), net primary production (NPP) and total respiration (TR) during emersion on seven tidal flats along a latitudinal gradient (from 22.48°N to 40.60°N) in winter and summer from 2012 to 2016 to assess the spatial and temporal variability of carbon dioxide flux. In winter, these processes decreased by 89%-104% towards higher latitudes. In summer, however, no clear trend was detected across the latitudinal gradient. Quadratic relationships between GPP_m , NPP and TR and sediment temperature can be described along the latitudinal gradient. These curves showed maximum values of GPP_m and NPP when the sediment temperatures reached 28.7 and 26.6°C respectively. TR increased almost linearly from 0 to 45°C. The maximum daily NPP across the latitudinal gradient averaged 0.24 ± 0.28 g C m^-2  day^-1 , which was only 10%-20% of the global average of NPP of vegetated coastal habitats. Multiplying with the global area of unvegetated tidal flats, our results suggest that the contribution of NPP on unvegetated tidal flats to the coastal carbon cycle is small (11.04 ± 13.32 Tg C/year). If the land cover of vegetated habitats is continuously degraded to unvegetated tidal flats, the carbon sequestration capacity in the intertidal zone is expected to reduce by at least 13.10 Tg C/year, equivalent to 1% of global carbon emissions from land-use change.

Photosynthesis and Respiration of Baltic Sea Benthic Diatoms to Changing Environmental Conditions and Growth Responses of Selected Species as Affected by an Adjacent Peatland (Hütelmoor)

Eight benthic diatom taxa (Actinocyclus octonarius, Melosira moniliformis, Halamphora sp. 1, Halamphora sp. 2, Navicula perminuta, Navicula phyllepta, Nitzschia dubiiformis, Nitzschia pusilla) were isolated from sediments sampled in the southern coastal brackish Baltic Sea and established as unialgal cultures. The coastal shallow water sampling area lies close to a fen peat site (Hütelmoor) and both are connected through an underground peat layer, which might facilitate organic matter and nutrient fluxes along the terrestrial-marine gradient. The photosynthetic performance of these diatoms was measured at different photon fluence rates (0-1200 μmol photons m-2 s-1, always recorded at 20°C) and different temperatures (5-40°C, always measured at saturating ∼270 μmol photons m-2 s-1), resulting in light saturation points between 32 and 151 μmol photons m-2 s-1 and maximum net primary production rates of 23-144 μmol O2 mg-1 Chl a h-1. None of the species showed severe photoinhibition, and hence all displayed a high photo-physiological plasticity. Photosynthetic oxygen evolution and respirational oxygen consumption between 5 and 40°C revealed eurythermal traits for half of the studied taxa as photosynthetic efficiency was at least 20% of the maximum values at the extreme temperatures. The remaining taxa also indicated eurythermal characteristics, however, photosynthetic efficiency of at least 20% was at a narrower temperature range [5 (10) °C to 30 (35) °C]. Species-specific optimum temperatures for photosynthesis (15-30°C) were always lower compared to respiration (25-40°C). Actinocyclus octonarius and Nitzschia dubiiformis were grown in different defined media, some enriched with Hütelmoor water to test for possible effects of organic components. Hütelmoor water media stimulated growth of both diatom species when kept in a light dark cycle. Actinocyclus octonarius particularly grew in darkness in Hütelmoor water media, pointing to heterotrophic capabilities. The benthic diatoms studied are characterized by high photo-physiological plasticity and a broad temperature tolerance to maintain high primary production rates under wide environmental fluctuations. Organic carbon fluxes from the Hütelmoor into the Baltic Sea may support mixo- and/or heterotrophic growth of microphytobenthic communities. These are essential traits for living in a highly dynamic and variable shallow water environment at the coastal zone of the Baltic Sea.

Diatom-Bacteria Interactions Modulate the Composition and Productivity of Benthic Diatom Biofilms

Benthic diatoms are dominant primary producers in intertidal mudflats and constitute a major source of organic carbon to consumers and decomposers residing within these ecosystems. They typically form biofilms whose species richness, community composition and productivity can vary in response to environmental drivers and their interactions with other organisms (e.g., grazers). Here, we investigated whether bacteria can affect diatom community composition and vice versa, and how this could influence the biodiversity-productivity relation. Using axenic experimental communities with three common benthic diatoms (Cylindrotheca closterium, Navicula phyllepta, and Seminavis robusta), we observed an increase in algal biomass production in diatom co-cultures in comparison to monocultures. The presence of bacteria decreased the productivity of diatom monocultures while bacteria did not seem to affect the overall productivity of diatoms grown in co-cultures. The effect of bacteria on diatom growth, however, appeared to be species-specific, resulting in compositional shifts when different diatom species were grown together. The effect of the diatoms on the bacteria also proved to be species-specific as each diatom species developed a bacterial community that differed in its composition. Together, our results suggest that interactions between bacteria and diatoms residing in mudflats are a key factor in the structuring of the benthic microbial community composition and the overall functioning of that community.

Water column dissolved silica concentration limits microphytobenthic primary production in intertidal sediments

Primary production of microphytobenthos (MPB) contributes significantly to the total production in shallow coastal environments. MPB is a diverse community in which diatoms are usually the main microalgal group. Diatoms require N, P, and other nutrients as with other autotrophs, but in addition require silicate to create their outer cell wall. Therefore, dissolved silica (DSi) might be a potential limiting factor for benthic primary production in areas with reduced freshwater input. To test this hypothesis, a microcosm experiment was conducted using intact sediment cores collected from an intertidal mudflat in the Bay of Cádiz and supplied with increasing concentrations of DSi (0, 5, 10, 25, and 45 μmol · L^-1 ). After 7 d of enrichment, we determined chlorophyll a and c (Chl a, c) contents, metabolic rates (Net [P_n ] and Areal Gross [P_g^A ] Production and Light [R_L ] and Dark [R_D ] Respiration), as well as fluxes of inorganic nutrients across the sediment-water interface. Chl a and c contents increased significantly with respect to the initial conditions but no differences between treatments were found. Both P_n and P_g^A showed a saturating-like pattern with silicate concentration, reaching maximum rates at a DSi concentration of 45 μmol · L^-1 . The addition of DSi also resulted in an increase of DSi and ammonium uptake by the sediment, which was significantly higher in light than in darkness. Our results clearly show that water column DSi concentrations have a direct impact on benthic primary production, also controlling other related processes such as inorganic nutrient fluxes.

Inorganic carbon availability in benthic diatom communities: photosynthesis and migration

Diatom-dominated microphytobenthos (MPB) is the main primary producer of many intertidal and shallow subtidal environments, being therefore of critical importance to estuarine and coastal food webs. Owing to tidal cycles, intertidal MPB diatoms are subjected to environmental conditions far more variable than the ones experienced by pelagic diatoms (e.g. light, temperature, salinity, desiccation and nutrient availability). Nevertheless, benthic diatoms evolved adaptation mechanisms to these harsh conditions, including the capacity to move within steep physical and chemical gradients, allowing them to perform photosynthesis efficiently. In this contribution, we will review present knowledge on the effects of dissolved inorganic carbon (DIC) availability on photosynthesis and productivity of diatom-dominated MPB. We present evidence of carbon limitation of photosynthesis in benthic diatom mats and highly productive MPB natural communities. Furthermore, we hypothesize that active vertical migration of epipelic motile diatoms could overcome local depletion of DIC in the photic layer, providing the cells alternately with light and inorganic carbon supply. The few available longer-term experiments on the effects of inorganic carbon enrichment on the productivity of diatom-dominated MPB have yielded inconsistent results. Therefore, further studies are needed to properly assess the response of MPB communities to increased CO2 and ocean acidification related to climate change.This article is part of the themed issue 'The peculiar carbon metabolism in diatoms'.

Different Types of Diatom-Derived Extracellular Polymeric Substances Drive Changes in Heterotrophic Bacterial Communities from Intertidal Sediments

Intertidal areas support extensive diatom-rich biofilms. Such microphytobenthic (MPB) diatoms exude large quantities of extracellular polymeric substances (EPS) comprising polysaccharides, glycoproteins and other biopolymers, which represent a substantial carbon pool. However, degradation rates of different EPS components, and how they shape heterotrophic communities in sediments, are not well understood. An aerobic mudflat-sediment slurry experiment was performed in the dark with two different EPS carbon sources from a diatom-dominated biofilm: colloidal EPS (cEPS) and the more complex hot-bicarbonate-extracted EPS. Degradation rate constants determined over 9 days for three sediment fractions [dissolved organic carbon (DOC), total carbohydrates (TCHO), and (cEPS)] were generally higher in the colloidal-EPS slurries (0.105–0.123 d⁻¹) compared with the hot-bicarbonate-extracted-EPS slurries (0.060–0.096 d⁻¹). Addition of hot-bicarbonate-EPS resulted in large increases in dissolved nitrogen and phosphorous by the end of the experiment, indicating that the more complex EPS is an important source of regenerated inorganic nutrients. Microbial biomass increased ~4–6-fold over 9 days, and pyrosequencing of bacterial 16S rRNA genes revealed that the addition of both types of EPS greatly altered the bacterial community composition (from 0 to 9 days) compared to a control with no added EPS. Bacteroidetes (especially Tenacibaculum) and Verrucomicrobia increased significantly in relative abundance in both the hot-bicarbonate-EPS and colloidal-EPS treatments. These differential effects of EPS fractions on carbon-loss rates, nutrient regeneration and microbial community assembly improve our understanding of coastal-sediment carbon cycling and demonstrate the importance of diverse microbiota in processing this abundant pool of organic carbon.

Dynamics of Inorganic Nutrients in Intertidal Sediments: Porewater, Exchangeable, and Intracellular Pools

The study of inorganic nutrients dynamics in shallow sediments usually focuses on two main pools: porewater (PW) nutrients and exchangeable (EX) ammonium and phosphate. Recently, it has been found that microphytobenthos (MPB) and other microorganisms can accumulate large amounts of nutrients intracellularly (IC), highlighting the biogeochemical importance of this nutrient pool. Storing nutrients could support the growth of autotrophs when nutrients are not available, and could also provide alternative electron acceptors for dissimilatory processes such as nitrate reduction. Here, we studied the magnitude and relative importance of these three nutrient pools (PW, IC, and EX) and their relation to chlorophylls (used as a proxy for MPB abundance) and organic matter (OM) contents in an intertidal mudflat of Cadiz Bay (Spain). MPB was localized in the first 4 mm of the sediment and showed a clear seasonal pattern; highest chlorophylls content was found during autumn and lowest during spring-summer. The temporal and spatial distribution of nutrients pools and MPB were largely correlated. Ammonium was higher in the IC and EX fractions, representing on average 59 and 37% of the total ammonium pool, respectively. Similarly, phosphate in the IC and EX fractions accounted on average for 40 and 31% of the total phosphate pool, respectively. Nitrate in the PW was low, suggesting low nitrification activity and rapid consumption. Nitrate accumulated in the IC pool during periods of moderate MPB abundance, being up to 66% of the total nitrate pool, whereas it decreased when chlorophyll concentration peaked likely due to a high nitrogen demand. EX-Nitrate accounted for the largest fraction of total sediment nitrate, 66% on average. The distribution of EX-Nitrate was significantly correlated with chlorophyll and OM, which probably indicates a relation of this pool to an increased availability of sites for ionic adsorption. This EX-Nitrate pool could represent an alternative nitrate source with significant concentrations available to the microbial community, deeper in the sediment below the oxic layer.

Viral Impact on Prokaryotic and Microalgal Activities in the Microphytobenthic Biofilm of an Intertidal Mudflat (French Atlantic Coast)

This is the first report on viriobenthos activity within the microbial biofilm located at the top-surface of the intertidal mudflat during emersion in Marennes-Oléron Bay (France). By combining in situ and ex situ approaches, the viral production (VP) was linked to the dynamics of prokaryotes and microphytobenthos (MPB). VP averaged 2–4 × 10⁸ viruses ml⁻¹ h⁻¹. VP correlated positively with the Virus to Prokaryote Ratio, and both were correlated negatively with the water content. The virus-induced mortality of prokaryotes was lower in winter than in summer (6.8 vs. 39.7% of the production) and the C-shunting may supply 2–12% of their Carbon Demand, respectively. VP accounted for 79% of loss in Prokaryotes but the response was delayed compared to the increase in VP suggesting a simultaneous release of viruses of MPB origin. This hypothesis is supported by capsid-sizing of virions by transmission electronic microscopy and bioassays. Harvesting and ex situ maintenance of top-surface sediments was carried out to monitor the dynamics of viruses, prokaryotes and MPB after inoculation with benthic or planktonic viruses. Benthic viruses modified the prokaryotic and MPB dynamics and decreased the photosynthesis efficiency in contrast to planktonic viruses that impacted MPB but not the prokaryotes.

The future of the northeast Atlantic benthic flora in a high CO2 world

Seaweed and seagrass communities in the northeast Atlantic have been profoundly impacted by humans, and the rate of change is accelerating rapidly due to runaway CO2 emissions and mounting pressures on coastlines associated with human population growth and increased consumption of finite resources. Here, we predict how rapid warming and acidification are likely to affect benthic flora and coastal ecosystems of the northeast Atlantic in this century, based on global evidence from the literature as interpreted by the collective knowledge of the authorship. We predict that warming will kill off kelp forests in the south and that ocean acidification will remove maerl habitat in the north. Seagrasses will proliferate, and associated epiphytes switch from calcified algae to diatoms and filamentous species. Invasive species will thrive in niches liberated by loss of native species and spread via exponential development of artificial marine structures. Combined impacts of seawater warming, ocean acidification, and increased storminess may replace structurally diverse seaweed canopies, with associated calcified and noncalcified flora, with simple habitats dominated by noncalcified, turf-forming seaweeds.

MORPHOLOGICAL STUDIES OF SOME MARINE MASTOGLOIA (BACILLARIOPHYCEAE) BELONGING TO SECTION SULCATAE, INCLUDING THE DESCRIPTION OF NEW SPECIES

Epiphytic diatoms on seagrass and seaweed were collected from tropical (e.g., Siladen Island, Celebes Sea, Indonesia and Phú Bài, China Sea, Vietnam), subtropical (e.g., Sharm el-Sheikh, Red Sea, Egypt), and temperate regions (e.g., Patmos Island, Greece) in 2000, 2005, and 2006. Eight species of Mastogloia, belonging to the section Sulcatae, are described mainly through scanning electron microscopy, including two new species to science, M. oculoides and M. sergiana. These species show a differently shaped median depression on the external valve face between the raphe-sternum and the valve margin. Moreover, they lack a developed conopeum or pseudoconopeum, which covers the median depression in other species of the section Sulcatae. This study gives new insights on the ultrastructure of the Mastogloia's valves and provides an update of their current geographical distribution.

VERTICAL MIGRATION OF A MIXED-SPECIES EUGLENA (EUGLENOPHYTA) ASSEMBLAGE INHABITING THE HIGH-INTERTIDAL SANDS OF NYE BEACH, OREGON(1)

Comparatively little is known about the vertical migration of the microphytobenthic community forming visible patches on high-energy beaches. We collected surface and cored samples to evaluate the timing and extent of downward migration of a multispecies Euglena assemblage inhabiting Nye Beach, Oregon. Euglena density at the surface was highly variable and was not correlated with the time of low tide or instantaneous irradiance measurements; however, triplicate cores collected at low and high tides revealed a tidal rhythm in mean depth. On average, 95% of the assemblage occurred within 1 cm of the surface during low tide, but 54% of the assemblage was collected between 1 and 8 cm below the surface during high tide. A midday shading experiment revealed that short-term changes in irradiance levels altered the Euglena density at the sediment surface by inducing vertical migration. This response to short-term fluctuations in light may explain the weak correlation between cell density at the surface and time of day. The high-intertidal location of these patches prevented the removal of nonmigrating cells by daily high tides, which increased the variability in surface samples and obscured the tidal migration rhythm detected in the core samples. Due in part to the semidiurnal nature of Oregon tides, this study provides in situ confirmation of past mesocosm research indicating that sediment disturbance during daily submersed periods is an important process in maintaining the quasi-tidal rhythm in the appearance and disappearance of Euglena spp. from the surface of beaches and intertidal sandflats.

LIGHT-INDUCED MOTILE RESPONSES OF THE ESTUARINE BENTHIC DIATOMS NAVICULA PERMINUTA AND CYLINDROTHECA CLOSTERIUM (BACILLARIOPHYCEAE)(1)

Motility of estuarine epipelic (mud-inhabiting) diatoms is an important adaptation to living in biofilms present within fine sediments. Motility allows cells to migrate within the photic zone in response to a wide range of environmental stimuli. The motile responses of two species of benthic diatoms to photon fluence rates and spectral quality were investigated. Cultures of Navicula perminuta (Grunow) in van Heurck and Cylindrotheca closterium (Ehrenb.) J. C. Lewin et Reimann both exhibited photoaccumulation at ∼200 μmol · m(-2)  · s(-1) and photodispersal from photon flux densities (PFDs) of ∼15 μmol · m(-2)  · s(-1) . Photokinesis (changing cell speed) contributed toward photodispersal for both species, and red light (λ = 681-691 nm) was most effective at inducing this process. N. perminuta showed a phototactic (directional) response, with active movement in response to a light gradient. Although this response was exhibited in white light, these directional responses were only elicited by wavelengths from 430 to 510 nm. In contrast, C. closterium did not exhibit phototaxis under any light conditions used in this study. Motile benthic diatoms thus exhibit complex and sophisticated responses to light quantity and quality, involving combinations of photokinesis and phototaxis, which can contribute toward explaining the patterns of large-scale cell movements observed in natural estuarine biofilms.