Comparison of methods for transfer of calibration models in near-infared spectroscopy: a case study based on correcting path length differences using fiber-optic transmittance probes in in-line near-infrared spectroscopy

This article addresses problems related to transfer of calibration models due to variations in distance between the transmittance fiber-optic probes. The data have been generated using a mixture design and measured at five different probe distances. A number of techniques reported in the literature have been compared. These include multiplicative scatter correction (MSC), path length correction (PLC), finite impulse response (FIR), orthogonal signal correction (OSC), piecewise direct standardization (PDS), and robust calibration. The quality of the predictions was expressed in terms of root mean square error of prediction (RMSEP). Robust calibration gave good calibration transfer results, while the other methods did not give acceptable results.

Isoflurane measurement error using short wavelength infrared techniques in horses: influence of fresh gas flow and pre-anaesthetic food deprivation

OBJECTIVE

To quantify the isoflurane measurement error arising from the use of short wavelength infrared (IR) anaesthetic gas analysis during low flow anaesthesia in horses.

STUDY DESIGN

Prospective clinical study.

ANIMAL POPULATION

Sixty-four client-owned horses referred for elective or emergency surgery (age 1-16 years, body mass 400-650 kg).

MATERIALS AND METHODS

Horses were divided into four groups based on duration of pre-anaesthetic food deprivation period (FDP) and fresh gas flow during anaesthesia: a high flow group with normal FDP (n = 16) and three groups with low flow and normal (n = 29), long (n = 5) or no (n = 14) FDP, respectively. Circuit isoflurane concentrations were measured simultaneously using a short wavelength (methane-sensitive) analyser (Datex Capnomac Ultima) and a long wavelength (methane-insensitive) analyser (Hewlett Packard M 1025 B) for at least 60 minutes. The difference between the readings of both analysers gave the isoflurane measurement error of short wavelength IR analysis, from which the circuit methane concentration was calculated.

RESULTS

In the low flow groups, isoflurane measurement error increased over time, whereas in the high flow group, error remained constant after an initial rise in the first 15 minutes. The isoflurane measurement error was significantly lower (p < 0.005) in the high flow group compared with the low flow-normal FDP group from 15 to 60 minutes. Compared to the low flow - normal FDP group, isoflurane measurement error was significantly smaller (p < 0.001, from 15 to 60 minutes) in the low flow-long FDP group and significantly larger (p = 0.016, at 60 minutes) in the low flow-no FDP group. Within the low flow-no FDP group, values in colic cases did not differ from those in noncolic cases (p > 0.7).

CONCLUSIONS

Isoflurane measurement using short wavelength IR absorption is inaccurate. The fresh gas flow and duration of pre-anaesthetic food deprivation influence the isoflurane measurement error during anaesthesia in horses.

CLINICAL RELEVANCE

Short wavelength IR analysers are not reliable for isoflurane measurement during (low flow) anaesthesia in horses.

Near infrared spectroscopy and imaging to probe differences in water content in normal and cancer human prostate tissues

The content of water in cancerous and normal human prostate in vitro tissues was shown to be different using near infrared (NIR) spectroscopy. The water absorption peaks at 1444 nm and 1944 nm are observed in both types of prostate tissues. The measurements show that less water is contained in cancerous tissues than in normal tissues. The OH stretching vibrational overtone mode at 1444 nm and other water overtone modes provide key spectroscopic fingerprints to detect cancer in prostate tissue. Transmission and backscattered spectral imaging were measured in cancer and normal prostate tissues. The degree of polarization for 700 nm, 800 nm, 1200 nm, and 1450 nm is larger for normal than for cancer tissues. The knowledge about water content offers a potential as a diagnostic tool to better determine and image cancer in prostate and in other tissues types such as breast and cervix using the absorption from vibrational overtones of H(2)O molecules in the NIR.

New developments in planar array infrared spectroscopy

A planar array infrared (PA-IR) spectrograph offers several advantages over other infrared approaches, including high acquisition rate and sensitivity. However, it suffers from some important drawbacks, such as a limited spectral range and a significant curvature of the recorded spectral images, which still need to be addressed. In this article, we present new developments in PA-IR spectroscopy that overcome these drawbacks. First, a data processing method for the correction of the curvature observed in the spectral images has been developed and refined. In addition, a dual-beam instrument that allows the simultaneous recording of two independent spectral images has been developed. These two improvements have been combined to demonstrate the real-time background correction capability of PA-IR instruments. Finally, the accessible spectral range of the PA-IR spectrograph has been extended to cover simultaneously the methylene stretching (3200-2800 cm(-1)) and the finger-print (2000-1000 cm(-1)) spectral regions.

[Relationship between respiration exchange ratio and muscle oxygen content measured by near-infrared spectroscopy]

OBJECTIVE

To study the relationship between respiration exchange ratio (RER) and tissue oxygen content in human skeletal muscle.

METHOD

Using a portable tissue oximeter based on near-infrared spectroscopy (NIRS), the relative changes of skeletal muscle oxygen content were measured non-invasively and in vivo when healthy volunteers were performing an incremental intensity running protocol. The results were compared with heart rate (HR), VO2, VCO2, and RER.

RESULT

In the experiment, the change in skeletal muscle oxygenation content of the volunteers was regular and has a significant close relationship to HR, VO2 and RER (P=0.01).

CONCLUSION

It shows that NIRS is a new photonic technology which provides a measurable biomedical parameter for the evaluation of athlete's physique and training effect. It offers reference for monitoring and assessing training effect in vivo, real-time and non-invasively.

Tomographic fluorescence imaging in tissue phantoms: a novel reconstruction algorithm and imaging geometry

A novel image reconstruction algorithm has been developed and demonstrated for fluorescence-enhanced frequency-domain photon migration (FDPM) tomography from measurements of area illumination with modulated excitation light and area collection of emitted fluorescence light using a gain modulated image-intensified charge-coupled device (ICCD) camera. The image reconstruction problem was formulated as a nonlinear least-squares-type simple bounds constrained optimization problem based upon the penalty/modified barrier function (PMBF) method and the coupled diffusion equations. The simple bounds constraints are included in the objective function of the PMBF method and the gradient-based truncated Newton method with trust region is used to minimize the function for the large-scale problem (39919 unknowns, 2973 measurements). Three-dimensional (3-D) images of fluorescence absorption coefficients were reconstructed using the algorithm from experimental reflectance measurements under conditions of perfect and imperfect distribution of fluorophore within a single target. To our knowledge, this is the first time that targets have been reconstructed in three-dimensions from reflectance measurements with a clinically relevant phantom.

Folding Structures of Isolated Peptides as Revealed by Gas-Phase Mid-Infrared Spectroscopy

To understand the intrinsic properties of peptides, which are determined by factors such as intramolecular hydrogen bonding, van der Waals bonding and electrostatic interactions, the conformational landscape of isolated protein building blocks in the gas phase was investigated. Here, we present IR-UV double-resonance spectra of jet-cooled, uncapped peptides containing a tryptophan (Trp) UV chromophore in the 1000-2000 cm(-1) spectral range. In the series Trp, Trp-Gly and Trp-Gly-Gly (where Gly stands for glycine), the number of detected conformers was found to decrease from six (Snoek et al., PCCP, 2001, 3, 1819) to four and two, respectively, which indicates a trend to relaxation to a global minimum. Density functional theory calculations reveal that the O-H in-plane bending vibration, together with the N-H in-plane bend ing and the peptide C=O stretching vibrations, is a sensitive probe to hydrogen bonding and, thus, to the folding of the peptide backbone in these structures. This enables the identification of spectroscopic fingerprints for the various conformational structures. By comparing the experimentally observed IR spectra with the calculated spectra, a unique conformational assignment can be made in most cases. The IR-UV spectrum of a Trp-containing nonapeptide (Trp-Ala-Gly-Gly-Asp-Ala-Ser-Gly-Glu) was recorded as well and, although the IR spectrum is less well-resolved (and it probably results from different isomers), groups of amide I (peptide C=O stretching) and amide II (N-H in-plane bending) bands can still be recognised, in agreement with predictions at the AM1 level.

IR ear thermometers: what do they measure and how do they comply with the EU technical regulation?

Medical diagnostics and clinical practice rely extensively on test and measurement instrumentation. It is therefore of paramount importance that test and measurement instrumentation provides reliable data of sufficient stability, within appropriate limits of accuracy. At the same time the intended purpose of a particular measuring instrument has to be taken into account. The essential problem of every measuring instrument is that it measures and indicates basically what appears at the input of the measuring instrument, which might be significantly different from the real condition of a measurand. Namely, it is assumed that a measurand is stable, repeatable, and relatively unsusceptible to environmental influences. All these requirements are difficult to assure in a biological system and especially difficult in medical practice. Technology could easily provide high-resolution measurements, but due to natural instability of a measurand and various influential parameters the measurement uncertainty is inevitable. Sometimes even gross measurement errors are introduced. To achieve the expected accuracy for intended purpose is therefore much more demanding than merely relying on manufacturers' specifications. This paper describes and analyses the mentioned dilemmas in the case of widely used infrared ear thermometers, with their benefits and limitations, as well as with regard to the European technical regulation in the field of medical devices.

An Infrared Evanescent Wave Sensing System Coupled with a Hollow Fiber Membrane for Detection of Volatile Organic Compounds in Aqueous Solutions

We have developed an on-line sensing method for the detection of volatile organic compounds (VOCs) in contaminated aqueous solutions by combining a microporous hollow fiber membrane with an infrared (IR) sensing system. Polypropylene microporous hollow fibers were used to separate the VOCs from the aqueous solution into the hollow fibers, which were purged countercurrently for detection by the IR sensing systems. An evanescent-wave-type IR sensing system was used to detect the VOCs that were purged from the hollow fibers. The sensing element was coated with polyisobutylene (PIB) to concentrate the VOCs for their detection. To study the performance of this system, we examined a number of factors, such as the purging flow rate, the sample flow rate, and the volatilities of the VOCs. The results indicate that an increase in the purging flow rate reduces the analytical signal significantly, especially for purging flow rates >2 mL/min. The pumping flow rate for the aqueous sample also influenced the analytical signals, but far less sensitively. The volatilities of the examined compounds also affected the analytical signals: the higher the volatility of the compound, the lower the intensity of the analytical signals and the shorter the time required to reach the equilibrium signal. From an examination of the dynamic range of this proposed method, a regression coefficient >0.994 was obtained for concentrations below 250 mg/L, even under non-equilibrium conditions. The response time of the system was studied in an effort to examine the suitability of using this sensing method for automatic detection. The results indicate that new equilibrium conditions were established within 3 min for highly volatile compounds, which suggests that on-line monitoring of the levels of VOCs can be performed in the field.

Improvement of the Partial Least Squares Model Performance for Oral Glucose Intake Experiments by Inside Mean Centering and Inside Multiplicative Signal Correction

Near infrared (NIR) spectroscopy has become a promising technique for the in vivo monitoring of glucose. Several capillary-rich locations in the body, such as the tongue, forearm, and finger, have been used to collect the in vivo spectra of blood glucose. For such an in vivo determination of blood glucose, collected NIR spectra often show some dependence on the measurement conditions and human body features at the location on which a probe touches. If NIR spectra collected for different oral glucose intake experiments, in which the skin of different patients and the measurement conditions may be quite different, are directly used, partial least squares (PLS) models built by using them would often show a large prediction error because of the differences in the skin of patients and the measurement conditions. In the present study, the NIR spectra in the range of 1300-1900 nm were measured by conveniently touching an optical fiber probe on the forearm skin with a system that was developed for in vivo measurements in our previous work. The spectra were calibrated to resolve the problem derived from the difference of patient skin and the measurement conditions by two proposed methods, inside mean centering and inside multiplicative signal correction (MSC). These two methods are different from the normal mean centering and normal multiplicative signal correction (MSC) that are usually performed to spectra in the calibration set, while inside mean centering and inside MSC are performed to the spectra in every oral glucose intake experiment. With this procedure, spectral variations resulted from the measurement conditions, and human body features will be reduced significantly. More than 3000 NIR spectra were collected during 68 oral glucose intake experiments, and calibrated. The development of PLS calibration models using the spectra show that the prediction errors can be greatly reduced. This is a potential chemometric technique with simplicity, rapidity and efficiency in the pretreatment of NIR spectra collected during oral glucose intake experiments.

Ultrafast time-resolved IR studies of protein-ligand interactions

Time-resolved mid-IR spectroscopy combines molecular sensitivity with ultrafast capability to incisively probe protein-ligand interactions in model heme proteins. Highly conserved residues near the heme binding site fashion a ligand-docking site that mediates the transport of ligands to and from the binding site. We employ polarization anisotropy measurements to probe the orientation and orientational distribution of CO when bound to and docked near the active binding site, as well as the dynamics of ligand trapping in the primary docking site. In addition, we use more conventional transient absorption methods to probe the dynamics of ligand escape from this site, as well as the ultrafast dynamics of NO geminate recombination with the active binding site. The systems investigated include myoglobin, hemoglobin, and microperoxidase.

Laminar fluid diffusion interface preconditioning of serum and urine for reagent-free infrared clinical analysis and diagnostics

A number of reagent-free infrared spectroscopic diagnostic and analytical methods have been established previously making use of dry biofluid films. For example, this approach has successfully measured high concentration analytes of serum and urine. However, a number of low concentration diagnostically relevant analytes presently elude detection by infrared spectroscopy. This is due in part to their relatively low concentration and in part to spectral interference by other strongly absorbing constituents. The applicability of the technique would be broadened substantially if it were possible to concentrate and separate lower concentration analytes, e. g., serum creatinine and urine proteins, from the obscuring presence of relatively high concentration compounds. One possible means to achieve this is through microfluidic sample preconditioning based on laminar fluid diffusion interfaces. The objective of this study was therefore to qualitatively assess the performance of this technology in preferentially separating certain serum and urine analytes of clinical interest that presently lie just below the threshold of detection by infrared spectroscopy. Observations from simulated and genuine urine and serum samples strongly suggest that this process should improve existing accuracy and extend the range of detectable analytes.

Implementation of LOCAL algorithm with near-infrared spectroscopy for compliance assurance in compound feedingstuffs

Seven thousand four hundred and twenty-three compound feed samples were used to develop near-infrared (NIR) calibrations for predicting the percentage of each ingredient used in the manufacture of a given compound feedingstuff. Spectra were collected at 2 nm increments using a FOSS NIRSystems 5000 monochromator. The reference data used for each ingredient percentage were those declared in the formula for each feedingstuff. Two chemometric tools for developing NIRS prediction models were compared: the so-called GLOBAL MPLS (modified partial least squares), traditionally used in developing NIRS applications, and the more recently developed calibration strategy known as LOCAL. The LOCAL procedure is designed to select, from a large database, samples with spectra resembling the sample being analyzed. Selected samples are used as calibration sets to develop specific MPLS equations for predicting each unknown sample. For all predicted ingredients, LOCAL calibrations resulted in a significant improvement in both standard error of prediction (SEP) and bias values compared with GLOBAL calibrations. Determination coefficient values (r(2)) also improved using the LOCAL strategy, exceeding 0.90 for most ingredients. Use of the LOCAL algorithm for calibration thus proved valuable in minimizing the errors in NIRS calibration equations for predicting a parameter as complex as the percentage of each ingredient in compound feedingstuffs.

In situ spectroscopic investigation of heterogeneous catalysts and reaction media at high pressure

In situ characterization of catalysts by means of complementary spectroscopic techniques can be regarded as the first step towards rational catalyst design. Spurred by the growing interest of catalytic reactions in supercritical fluids and by several industrial reactions traditionally performed at high pressure (>10 bar), new demands and challenges are put to in situ spectroscopic characterization of heterogeneous catalytic reactions. In this article, we discuss the development and the use of spectroscopic and related techniques suitable for elucidating such high-pressure reactions. Selected examples from phase behaviour studies with a view cell, investigations with transmission and attenuated total reflection (ATR) infrared spectroscopy as well as X-ray absorption spectroscopy (EXAFS, XANES), are presented to show the strategies, opportunities and limitations of such high pressure in situ studies. Different facets appear to be important to gain insight into catalytic reactions in supercritical fluids: the identification of the phase behaviour of the reaction mixture, the behaviour of the fluid inside the porous catalyst, the processes occurring at the solid-fluid interface, the possible dissolution of active species and, similar as in gas-solid reactions, the establishment of structure-activity relationships.

Near infrared spectroscopy in brain injury: today’s perspective

The technique of near infrared spectroscopy (NIRS) is based on the principle of light attenuation by the chromophores oxyhaemoglobin (HbO2), deoxyhaemoglobin (Hb) and cytochrome oxidase. Changes in the detected light levels can therefore represent changes in concentrations of these chromophores. Clinical use of NIRS in the brain has been well established in neonates where transillumination is possible. While it has become a useful research tool for monitoring the adult brain, clinical application has been hampered by the fact that it must be applied in reflectance mode. This has resulted in a number of concerns, most significantly the issue of signal contamination by the extracranial tissue layers. Algorithms have been applied to try to overcome this problem, and techniques such as time resolved, phase resolved and spatially resolved spectroscopy have been developed. There has been renewed interest in NIRS as an easy to use, non-invasive technique for measuring tissue oxygenation in the adult brain. Recent technical advances have led to the development of compact, portable instruments that detect changes in optical attenuation of several wavelengths of light. Near infrared spectroscopy is an evolving technology that holds significant potential for technical advancement. In particular, NIRS shows future promise as a clinical tool for bedside cerebral blood flow measurements and as a cerebral imaging modality for mapping structure and function.

Vibrational spectroscopy: a ‘vanishing’ discipline?

The aim of this tutorial review is to convince a broad readership that vibrational spectroscopy, although according to some vibrational spectroscopists seemingly less in focus nowadays than in days past, is far from 'dead'. It may seem to some that infrared and Raman spectroscopy are less in focus than in times past, despite the unique analytical capabilities. Vibrational spectroscopy is particularly powerful for non-destructive characterisation of substances, including living material. But compared to the past, a shift in applications has taken place, bringing new opportunities. This is partly due to the introduction of new features, including imaging and 2D correlation spectroscopy. Another factor is the recognition that vibrational spectroscopy can play a role in new rather than only in the traditional fields of application, e.g. new applications in the life-science field (living cells, cancer research), the characterisation of soil. But also the traditional application in catalysis sees new development within the context of Operando spectroscopy.

Getting more from IR-microscopy of resin-bound libraries

A linear pixel-array detector was employed to create spatially resolved multi-layered IR-images of a large collection of polymer beads supporting carbonyl and nitrile monomers. The feasibility of creating multi-layered IR-images with nitrile IR-band separation of 4 cm(-1) was demonstrated, an important issue when considering that many monomers used to develop combinatorial libraries are structurally analogous and therefore occupy very similar positions in the IR-spectrum. Strategies for obtaining high quality spectral data from both imaging and mapping IR-microscopes without compromising on sample area, analysis time, or spatial resolution are also described.

Tunable diode laser spectrometer for pulsed supersonic jets: application to weakly-bound complexes and clusters

The design and operation of an apparatus for studying infrared spectra of weakly-bound complexes is described in detail. A pulsed supersonic jet expansion is probed using a tunable Pb-salt diode laser spectrometer operated in a rapid-scan mode. The jet may be fitted with either pinhole or slit shaped nozzles, the former giving lower effective rotational temperatures, and the latter giving sharper spectral lines. Notable features of the apparatus include use of a toroidal multi-pass mirror system to give over 100 passes of the laser through the supersonic jet, use of the normal laser controller for laser sweeping during both setup and data acquisition, and use of a simple semi-automated wavenumber calibration procedure. Performance of the apparatus is illustrated with observed spectra of the van der Waals complex He-OCS, and the seeded helium clusters He(N)-OCS and He(N)-CO.

Stabilization, injection and control of quantum cascade lasers, and their application to chemical sensing in the infrared

Quantum cascade lasers (QCLs) are a relatively new type of semiconductor laser operating in the mid- to long-wave infrared. These monopolar multilayered quantum well structures can be fabricated to operate anywhere between 3.5 and 20 microm, which includes the molecular fingerprint region of the infrared. This makes them an ideal choice for infrared chemical sensing, a topic of great interest at present. Frequency stabilization and injection locking increase the utility of QCLs. We present results of locking QCLs to optical cavities, achieving relative linewidths down to 5.6 Hz. We report injection locking of one distributed feedback grating QCL with light from a similar QCL, demonstrating capture ranges of up to +/-500 MHz, and suppression of amplitude modulation by up to 49 dB. We also present various cavity-enhanced chemical sensors employing the frequency stabilization techniques developed, including the resonant sideband technique known as NICE-OHMS. Sensitivities of 9.7 x 10(-11) cm(-1) Hz(-1/2) have been achieved in pure nitrous oxide.

Development of a stabilized low temperature infrared absorption cell for use in low temperature and collisional cooling experiments

We have constructed a stabilized low temperature infrared absorption cell cooled by an open cycle refrigerator, which can run with liquid nitrogen from 250 to 80K or with liquid helium from 80K to a few kelvin. Several CO infrared spectra were recorded at low temperature using a tunable diode laser spectrometer. These spectra were analyzed taking into account the detailed effects of collisions on the line profile when the pressure increases. We also recorded spectra at very low pressure to accurately model the diode laser emission. Spectra of the R(2) line in the fundamental band of 13CO cooled by collisions with helium buffer gas at 10.5K and at pressures near 1 Torr have been recorded. The He-pressure broadening parameter (gamma(0) = 0.3 cm(-1) atm(-1)) has been derived from the simultaneous analysis of four spectra at different pressures.

Tunable optically pumped lead-chalcogenide mid-infrared emitters on Si-substrates

Two types of novel lead-chalcogenide mid-IR emitters grown by molecular beam epitaxy (MBE) on Si or BaF(2) substrates are described:PbSe/PbEuSe edge emitting double heterostructure (DH) and quantum well (QW) lasers are pumped optically with low-cost III-V laser-diodes. They emit in the 3-6 microm range with powers up to 200 mW. Tuning is performed by temperature change and/or mechanically if bars with slightly tapered composition are used. A "wavelength transformer", a PbSe/PbEuSe active resonant cavity with top and bottom Bragg mirror transforms the incoming 0.8 microm pump radiation to e.g. 4.2 microm wavelength. It operates at room temperature, width and value of the emission line is determined by design.

X-ray studies and time-resolved photoluminescence on optically pumped antimonide-based midinfrared type-II lasers

We report on high-resolution X-ray diffraction and time-resolved photoluminescence (TR-PL) studies of antimonide-based midinfrared (MIR) type-II laser samples. A structural characterization taking into account asymmetrical strain, layer tilting, and relaxation enables an accurate determination of the average lattice constant of the active region and the composition of the cladding layers. By designing the antimonide-to-arsenide interfaces, we achieve exact lattice matching of the active region to the substrate. Non-radiative recombination processes are investigated with time-resolved photoluminescence. The samples are also characterized under optically pumped laser operation. By an examination of the time-integrated and time-resolved amplified spontaneous emission (TR-ASE), we investigate the modal gain and gain dynamics. The variable stripe length method is combined with the TR-PL approach. Compared to the time-integrated gain spectra the spectral dependence of the maximum and minimum time-resolved gain shows a broad plateau. The full width half maximum (FWHM) of the TR-ASE pulse is 5.5 +/- 0.5 ps. Thus, short pulses in this range should be achievable upon laser operation. The active regions of the laser structures investigated here are promising subunits of type-II quantum cascade lasers.

High precision measurements of atmospheric nitrous oxide and methane using thermoelectrically cooled mid-infrared quantum cascade lasers and detectors

A compact, fast response, mid-infrared absorption spectrometer using thermoelectrically (TE) cooled pulsed quantum cascade (QC) lasers and TE detectors has been developed to demonstrate the applicability of QC lasers for high precision measurements of nitrous oxide and methane in the earth's atmosphere. Reduced pressure extractive sampling with a 56 m path length, 0.5 l volume, multiple pass absorption cell allows a time response of <0.1s which is suitable for eddy correlation flux measurements for these gases. Precision of 0.3 ppb (rms, 1s averaging time) or 0.1% of the ambient concentration for N(2)O (4 ppb or 0.2% of ambient for CH(4)), has been demonstrated using QC lasers at 4.5 microm (7.9 microm for CH(4)), corresponding to an absorbance precision of 4 x 10(-5) Hz(-1/2) (8 x 10(-5) Hz(-1/2) for CH(4)). Stabilization of the temperature of the optical bench and the pulse electronics results in a minimum Allan variance corresponding to 0.06 ppb for N(2)O with an averaging time of 100 s (0.7 ppb with an averaging time of 200 s for CH(4)). The instrument is capable of long-term, unattended, continuous operation without cryogenic cooling of either laser or detector.

Multichannel apparatus for parallel monitoring of light scattering in Dictyostelium discoideum cell suspensions

Suspensions of Dictyostelium discoideum amoebae display free-running light scattering oscillations at the onset of development. We describe a device to monitor these oscillations in several samples in parallel. The apparatus consists of a thermostated cuvette holder where up to eight cuvettes containing cell suspension are inserted. Cells are aerated and kept in suspension via an airlift. Infrared light emitted from a five-diode array passes through the suspension and is detected by an array of five light detecting diodes. The resulting signal is digitized and recorded with a sampling rate of two measuring points/second. The parallel analysis approach allows determination of the effects of adding of agents or of variations in the external conditions in the same batch of amoebae at the same developmental time point. This represents an advantage over the conventional single cuvette approach, as oscillation characteristics themselves are developmentally regulated. Moreover, as the new experimental setup enables simultaneous analyses of up to eight samples, the behavior of wild-type and several mutant strains can be compared under identical experimental conditions.

Ti: sapphire-based picosecond visible-infrared sum-frequency spectroscopy from 900-3100 cm-1

Visible-infrared sum-frequency spectroscopy is ideally suited to the study of surfaces and interfaces. This paper introduces new sum-frequency spectroscopy instrumentation that we have developed with two novel features: (1) stable and robust infrared generation in the 900-3100 cm(-1) (11-3.2 microm) region using an amplified Ti : sapphire oscillator with a home-built OPG/OPA, and (2) continuous tuning over either 900-2700 cm(-1) (11-3.7 microm) or 1800-3100 cm(-1) (5.5-3.2 microm) in a single experiment. All practical details of baseline correction issues due to the picosecond pulses (including variation in infrared (IR) energy, spatial and temporal overlap, Fresnel coefficients) are addressed while demonstrating signal throughout this region from an amorphous gold surface. A sum-frequency spectrum from an oriented polymer is shown as a complete example of the data treatment, which reveals the vibrational modes accessible in this wavelength region.