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García‐Rodríguez A, Lenzner B, Marino C, Liu C, Velasco JA, Bellard C, Jeschke JM, Seebens H, Essl F. Patterns and drivers of climatic niche dynamics during biological invasions of island-endemic amphibians, reptiles, and birds. GLOBAL CHANGE BIOLOGY 2023; 29:4924-4938. [PMID: 37395619 PMCID: PMC10946511 DOI: 10.1111/gcb.16849] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Revised: 05/29/2023] [Accepted: 06/05/2023] [Indexed: 07/04/2023]
Abstract
Shifts between native and alien climatic niches pose a major challenge for predicting biological invasions. This is particularly true for insular species because geophysical barriers could constrain the realization of their fundamental niches, which may lead to underestimates of their invasion potential. To investigate this idea, we estimated the frequency of shifts between native and alien climatic niches and the magnitude of climatic mismatches using 80,148 alien occurrences of 46 endemic insular amphibian, reptile, and bird species. Then, we assessed the influence of nine potential predictors on climatic mismatches across taxa, based on species' characteristics, native range physical characteristics, and alien range properties. We found that climatic mismatch is common during invasions of endemic insular birds and reptiles: 78.3% and 55.1% of their respective alien records occurred outside of the environmental space of species' native climatic niche. In comparison, climatic mismatch was evident for only 16.2% of the amphibian invasions analyzed. Several predictors significantly explained climatic mismatch, and these varied among taxonomic groups. For amphibians, only native range size was associated with climatic mismatch. For reptiles, the magnitude of climatic mismatch was higher for species with narrow native altitudinal ranges, occurring in topographically complex or less remote islands, as well as for species with larger distances between their native and alien ranges. For birds, climatic mismatch was significantly larger for invasions on continents with higher phylogenetic diversity of the recipient community, and when the invader was more evolutionarily distinct. Our findings highlight that apparently common niche shifts of insular species may jeopardize our ability to forecast their potential invasions using correlative methods based on climatic variables. Also, we show which factors provide additional insights on the actual invasion potential of insular endemic amphibians, reptiles, and birds.
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Alibardi L. General aspects on skin development in vertebrates with emphasis on sauropsids epidermis. Dev Biol 2023; 501:60-73. [PMID: 37244375 DOI: 10.1016/j.ydbio.2023.05.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Revised: 05/02/2023] [Accepted: 05/25/2023] [Indexed: 05/29/2023]
Abstract
General cellular aspects of skin development in vertebrates are presented with emphasis on the epidermis of sauropsids. Anamniote skin develops into a multilayered mucogenic and soft keratinized epidermis made of Intermediate Filament Keratins (IFKs) that is reinforced in most fish and few anurans by dermal bony and fibrous scales. In amniotes, the developing epidermis in contact with the amniotic fluid initially transits through a mucogenic phase recalling that of their anamniotes progenitors. A new gene cluster termed EDC (Epidermal Differentiation Complex) evolved in amniotes contributing to the origin of the stratum corneum. The EDC contains numerous genes coding for over 100 types of corneous proteins (CPs). In sauropsids 2-8 layers of embryonic epidermis accumulate soft keratins (IFKs) but do not form a compact corneous layer. The embryonic epidermis of reptiles and birds produces small amount of other, poorly known proteins in addition to IFKs and mucins. In the following development, a resistant corneous layer is formed underneath the embryonic epidermis that is shed before hatching. The definitive corneous epidermis of sauropsids is mainly composed of CBPs (Corneous beta proteins, formerly indicated as beta-keratins) derived from the EDC. CBPs belong to a gene sub-family of CPs unique for sauropsids, contain an inner amino acid region formed by beta-sheets, are rich in cysteine and glycine, and make most of the protein composition of scales, claws, beaks and feathers. In mammalian epidermis CPs missing the beta-sheet region are instead produced, and include loricrin, involucrin, filaggrin and various cornulins. Small amount of CPs accumulate in the 2-3 layers of mammalian embryonic epidermis and their appendages, that is replaced with the definitive corneous layers before birth. Differently from sauropsids, mammals utilize KAPs (keratin associated proteins) rich in cysteine and glycine for making the hard corneous material of hairs, claws, hooves, horns, and occasionally also scales.
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Liu QL, Cheng L, Stubbs TL, Moon BC, Benton MJ, Yan CB, Tian L. Rapid neck elongation in Sauropterygia (Reptilia: Diapsida) revealed by a new basal pachypleurosaur from the Lower Triassic of China. BMC Ecol Evol 2023; 23:44. [PMID: 37648992 PMCID: PMC10469986 DOI: 10.1186/s12862-023-02150-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Accepted: 08/16/2023] [Indexed: 09/01/2023] Open
Abstract
Neck elongation has appeared independently in several tetrapod groups, including giraffes and sauropod dinosaurs on land, birds and pterosaurs in the air, and sauropterygians (plesiosaurs and relatives) in the oceans. Long necks arose in Early Triassic sauropterygians, but the nature and rate of that elongation has not been documented. Here, we report a new species of pachypleurosaurid sauropterygian, Chusaurus xiangensis gen. et sp. nov., based on two new specimens from the Early Triassic Nanzhang-Yuan'an Fauna in the South China Block. The new species shows key features of its Middle Triassic relatives, but has a relatively short neck, measuring 0.48 of the trunk length, compared to > 0.8 from the Middle Triassic onwards. Comparative phylogenetic analysis shows that neck elongation occurred rapidly in all Triassic eosauropterygian lineages, probably driven by feeding pressure in a time of rapid re-establishment of new kinds of marine ecosystems.
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Liu S, Zhao B, Gu X, Du W. Behavioral thermoregulation by reptile embryos promotes hatching success and synchronization. Commun Biol 2023; 6:848. [PMID: 37582884 PMCID: PMC10427690 DOI: 10.1038/s42003-023-05229-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Accepted: 08/08/2023] [Indexed: 08/17/2023] Open
Abstract
Reptile embryos can move inside eggs to seek optimal thermal conditions, falsifying the traditional assumption that embryos are simply passive occupants within their eggs. However, the adaptive significance of this thermoregulatory behavior remains a contentious topic. Here we demonstrate that behavioral thermoregulation by turtle embryos shortened incubation periods which may reduce the duration of exposure to dangerous environments, decreased egg mortality imposed by lethally high temperatures, and synchronized hatching which reduces predation risk. Our study provides empirical evidence that behavioral thermoregulation by turtle embryos is adaptive.
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Koludarov I, Senoner T, Jackson TNW, Dashevsky D, Heinzinger M, Aird SD, Rost B. Domain loss enabled evolution of novel functions in the snake three-finger toxin gene superfamily. Nat Commun 2023; 14:4861. [PMID: 37567881 PMCID: PMC10421932 DOI: 10.1038/s41467-023-40550-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Accepted: 07/28/2023] [Indexed: 08/13/2023] Open
Abstract
Three-finger toxins (3FTXs) are a functionally diverse family of toxins, apparently unique to venoms of caenophidian snakes. Although the ancestral function of 3FTXs is antagonism of nicotinic acetylcholine receptors, redundancy conferred by the accumulation of duplicate genes has facilitated extensive neofunctionalization, such that derived members of the family interact with a range of targets. 3FTXs are members of the LY6/UPAR family, but their non-toxin ancestor remains unknown. Combining traditional phylogenetic approaches, manual synteny analysis, and machine learning techniques (including AlphaFold2 and ProtT5), we have reconstructed a detailed evolutionary history of 3FTXs. We identify their immediate ancestor as a non-secretory LY6, unique to squamate reptiles, and propose that changes in molecular ecology resulting from loss of a membrane-anchoring domain and changes in gene expression, paved the way for the evolution of one of the most important families of snake toxins.
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Li X, Wang H, McCauley DJ, Altieri AH, Silliman BR, Lefcheck JS, Wu J, Li B, He Q. A wide megafauna gap undermines China's expanding coastal ecosystem conservation. SCIENCE ADVANCES 2023; 9:eadg3800. [PMID: 37556546 PMCID: PMC10411873 DOI: 10.1126/sciadv.adg3800] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2023] [Accepted: 07/12/2023] [Indexed: 08/11/2023]
Abstract
To fulfill sustainable development goals, many countries are expanding efforts to conserve ecologically and societally critical coastal ecosystems. Although megafauna profoundly affect the functioning of ecosystems, they are neglected as a key component in the conservation scheme for coastal ecosystems in many geographic contexts. We reveal a rich diversity of extant megafauna associated with all major types of coastal ecosystems in China, including 218 species of mammals, birds, reptiles, cephalopods, and fish across terrestrial and marine environments. However, 44% of these species are globally threatened, and 78% have not yet been assessed in China for extinction risk. More worrisome, 73% of these megafauna have not been designated as nationally protected species, and <10% of their most important habitats are protected. Filling this wide "megafauna gap" in China and globally would be a leading step as humanity strives to thrive with coastal ecosystems.
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Kilmury AA, Anderson A, Wijesinghe DS, Verstraete AF, Ezeana W, Anderson AE, Brink KS. Microvertebrate faunal assemblages of the Favel Formation (late Cenomanian-middle Turonian) of Manitoba, Canada. PeerJ 2023; 11:e15493. [PMID: 37551349 PMCID: PMC10404398 DOI: 10.7717/peerj.15493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Accepted: 05/11/2023] [Indexed: 08/09/2023] Open
Abstract
Microvertebrate assemblages of the Upper Cretaceous (late Cenomanian to mid-Turonian) Favel Formation of Manitoba are formally described for the first time. New vertebrate occurrences from the Favel Formation include the actinopterygians Caturidae indet., cf. Albulidae incertae sedis, Micropycnodon kansasensis, Pachyrhizodus minimus, Protosphyraena sp., Thryptodus loomisi, chondrichthyans Ischyrhiza cf. mira, I. texana, Ptychodus marginalis, P. occidentalis, and P. rhombodus, the avian cf. Ichthyornis sp., the reptile Testudines indet., and an unknown taxon referred to as Vertebrate A. Changes in faunal occurrences throughout the formation suggest an offshore open marine environment for the lower and middle horizons and nearshore marine for the upper horizon, represent ing mid- and late stages of the Greenhorn third-order marine cycle. This newly described diversity increases biogeographic affinities of the late Cenomanian to mid-Turonian vertebrate assemblages of Manitoba with central WIS localities in South Dakota and Kansas, providing additional support for a central vertebrate biogeographic subprovince during late Cenomanian to early Turonian times, as well as WIS localities further south in Texas decreasing the gradient of the north-south or central-south community boundary during early and mid-Turonian times.
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This ancient reptile wanted to be a whale. Nature 2023; 620:471. [PMID: 37567998 DOI: 10.1038/d41586-023-02524-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/13/2023]
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Gônet J, Laurin M, Hutchinson JR. Evolution of posture in amniotes-Diving into the trabecular architecture of the femoral head. J Evol Biol 2023; 36:1150-1165. [PMID: 37363887 DOI: 10.1111/jeb.14187] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2022] [Revised: 03/29/2023] [Accepted: 04/16/2023] [Indexed: 06/28/2023]
Abstract
Extant amniotes show remarkable postural diversity. Broadly speaking, limbs with erect (strongly adducted, more vertically oriented) posture are found in mammals that are particularly heavy (graviportal) or show good running skills (cursorial), while crouched (highly flexed) limbs are found in taxa with more generalized locomotion. In Reptilia, crocodylians have a "semi-erect" (somewhat adducted) posture, birds have more crouched limbs and lepidosaurs have sprawling (well-abducted) limbs. Both synapsids and reptiles underwent a postural transition from sprawling to more erect limbs during the Mesozoic Era. In Reptilia, this postural change is prominent among archosauriforms in the Triassic Period. However, limb posture in many key Triassic taxa remains poorly known. In Synapsida, the chronology of this transition is less clear, and competing hypotheses exist. On land, the limb bones are subject to various stresses related to body support that partly shape their external and internal morphology. Indeed, bone trabeculae (lattice-like bony struts that form the spongy bone tissue) tend to orient themselves along lines of force. Here, we study the link between femoral posture and the femoral trabecular architecture using phylogenetic generalized least squares. We show that microanatomical parameters measured on bone cubes extracted from the femoral head of a sample of amniote femora depend strongly on body mass, but not on femoral posture or lifestyle. We reconstruct ancestral states of femoral posture and various microanatomical parameters to study the "sprawling-to-erect" transition in reptiles and synapsids, and obtain conflicting results. We tentatively infer femoral posture in several hypothetical ancestors using phylogenetic flexible discriminant analysis from maximum likelihood estimates of the microanatomical parameters. In general, the trabecular network of the femoral head is not a good indicator of femoral posture. However, ancestral state reconstruction methods hold great promise for advancing our understanding of the evolution of posture in amniotes.
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de Luna M, García-Barrios R, Barton DP, García-Vázquez L. ADULT TAPEWORM (PLATYHELMINTHES: CESTODA) PARASITES OF NORTH AMERICAN HERPETOFAUNA: CHECKLIST OF SPECIES AND IDENTIFICATION KEY TO FAMILIES AND GENERA. J Parasitol 2023; 109:377-400. [PMID: 37532252 PMCID: PMC10658874 DOI: 10.1645/23-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/04/2023] Open
Abstract
An updated checklist of adult tapeworms (Platyhelminthes: Cestoda) that parasitize wild North American amphibians and reptiles is presented: A total of 58 species grouped in 15 genera, 5 families, and 3 orders, are registered; these infect a total of 90 species of reptiles and 88 species of amphibians in the region. An illustrated identification key for the families and genera listed is proposed.
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Tarjuelo R, Aragón P. Assessing vulnerability of reptile hotspots through temporal trends of global change factors in the Iberian Peninsula. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 871:161917. [PMID: 36736406 DOI: 10.1016/j.scitotenv.2023.161917] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Revised: 01/18/2023] [Accepted: 01/26/2023] [Indexed: 06/18/2023]
Abstract
Habitat degradation and climate change are major threats to the long-term persistence of reptile populations. However, their roles on primary productivity instability remain unclear at certain scales. Besides, the design of protected areas has often overlooked reptiles or assumed that their ecological requirements are represented under the umbrella of more charismatic species. Here, we assess the vulnerability of areas of high diversity of reptiles in the Iberian Peninsula to global change using data from satellite imagery. We focused on primary productivity, climate and land-use change because they are indicators of environmental variability that might impair ecosystem functioning and alter wildlife communities. We used linear regressions to detect monotonic temporal trends in primary productivity (through the enhanced vegetation index, EVI) and climate (mean temperature and accumulated precipitation) at two spatial resolutions (10-km2 UTM squares and CORINE land-cover polygon level) over the period 2000-2020. We also determined how the strength of land-use and climate change affected the intensity of change in primary productivity at both spatial scales with multivariate linear regressions. We identified 339 hotspots (10-km2 UTM squares) and monotonic increments of temperature, EVI or both occurred in 43 %, 16 % and 22 % of them, respectively. Positive trends of the EVI were related to increasing temperatures and changes in shrubland and forest cover. Within the hotspots with monotonic increments in EVI and temperature, EVI increments occurred in 65 % of the CORINE polygons that did not change their land-cover type, with stronger increases in tree crops. Finally, the Natura 2000 network provides only moderate protection to reptile hotspots, being most of the vegetation types relatively underrepresented. The proportion of forest and shrubland protected by the Natura 2000 network was higher in hotspots where EVI changed. Our procedures are relevant to prioritize hotspots requiring ground monitoring that allows economic and time savings.
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McInnes CJ, Damon IK, Smith GL, McFadden G, Isaacs SN, Roper RL, Evans DH, Damaso CR, Carulei O, Wise LM, Lefkowitz EJ. ICTV Virus Taxonomy Profile: Poxviridae 2023. J Gen Virol 2023; 104. [PMID: 37195882 DOI: 10.1099/jgv.0.001849] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/19/2023] Open
Abstract
Poxviridae is a family of enveloped, brick-shaped or ovoid viruses. The genome is a linear molecule of dsDNA (128-375 kbp) with covalently closed ends. The family includes the sub-families Entomopoxvirinae, whose members have been found in four orders of insects, and Chordopoxvirinae, whose members are found in mammals, birds, reptiles and fish. Poxviruses are important pathogens in various animals, including humans, and typically result in the formation of lesions, skin nodules, or disseminated rash. Infections can be fatal. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Poxviridae, which is available at ictv.global/report/poxviridae.
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Tagliavento M, Davies AJ, Bernecker M, Staudigel PT, Dawson RR, Dietzel M, Götschl K, Guo W, Schulp AS, Therrien F, Zelenitsky DK, Gerdes A, Müller W, Fiebig J. Evidence for heterothermic endothermy and reptile-like eggshell mineralization in Troodon, a non-avian maniraptoran theropod. Proc Natl Acad Sci U S A 2023; 120:e2213987120. [PMID: 37011196 PMCID: PMC10104568 DOI: 10.1073/pnas.2213987120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Accepted: 02/15/2023] [Indexed: 04/05/2023] Open
Abstract
The dinosaur-bird transition involved several anatomical, biomechanical, and physiological modifications of the theropod bauplan. Non-avian maniraptoran theropods, such as Troodon, are key to better understand changes in thermophysiology and reproduction occurring during this transition. Here, we applied dual clumped isotope (Δ47 and Δ48) thermometry, a technique that resolves mineralization temperature and other nonthermal information recorded in carbonates, to eggshells from Troodon, modern reptiles, and modern birds. Troodon eggshells show variable temperatures, namely 42 and 29 ± 2 °C, supporting the hypothesis of an endothermic thermophysiology with a heterothermic strategy for this extinct taxon. Dual clumped isotope data also reveal physiological differences in the reproductive systems between Troodon, reptiles, and birds. Troodon and modern reptiles mineralize their eggshells indistinguishable from dual clumped isotope equilibrium, while birds precipitate eggshells characterized by a positive disequilibrium offset in Δ48. Analyses of inorganic calcites suggest that the observed disequilibrium pattern in birds is linked to an amorphous calcium carbonate (ACC) precursor, a carbonate phase known to accelerate eggshell formation in birds. Lack of disequilibrium patterns in reptile and Troodon eggshells implies these vertebrates had not acquired the fast, ACC-based eggshell calcification process characteristic of birds. Observation that Troodon retained a slow reptile-like calcification suggests that it possessed two functional ovaries and was limited in the number of eggs it could produce; thus its large clutches would have been laid by several females. Dual clumped isotope analysis of eggshells of extinct vertebrates sheds light on physiological information otherwise inaccessible in the fossil record.
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Keevil MG, Noble N, Boyle SP, Lesbarrères D, Brooks RJ, Litzgus JD. Lost reproductive value reveals a high burden of juvenile road mortality in a long-lived species. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2023; 33:e2789. [PMID: 36482023 DOI: 10.1002/eap.2789] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Revised: 07/23/2022] [Accepted: 08/25/2022] [Indexed: 06/17/2023]
Abstract
Adult mortality is often the most sensitive vital rate affecting at-risk wildlife populations. Therefore, road ecology studies often focus on adult mortality despite the possibility for roads to be hazardous to juvenile individuals during natal dispersal. Failure to quantify concurrent variation in mortality risk and population sensitivity across demographic states can mislead the efforts to understand and mitigate the effects of population threats. To compare relative population impacts from road mortality among demographic classes, we weighted mortality observations by applying reproductive value analysis to quantify expected stage-specific contributions to population growth. We demonstrate this approach for snapping turtles (Chelydra serpentina) observed on roads at two focal sites in Ontario, Canada, where we collected data for both live and dead individuals observed on roads. We estimated reproductive values using stage-classified matrix models to compare relative population-level impacts of adult and juvenile mortality. Reproductive value analysis is a tractable approach to assessing demographically variable effects for applications covering large spatial scales, nondiscrete populations, or where abundance data are lacking. For one site with long-term life-history data, we compared demographic frequency on roads to expected general population frequencies predicted by the matrix model. Our application of reproductive value is sex specific but, as juvenile snapping turtles lack external secondary sex characters, we estimated the sex ratio of road-crossing juveniles after dissecting and sexing carcasses collected on roads at five sites across central Ontario, Canada. Juveniles were more abundant on roads than expected, suggesting a substantial dispersal contribution, and the road-killed juvenile sex ratio approached 1:1. A higher proportion of juveniles were also found dead compared with adults, and cumulative juvenile mortality had similar population-level importance as adult mortality. This suggests that the impact of roads needs to be considered across all life stages, even in wildlife species with slow life histories, such as snapping turtles, that are particularly sensitive to adult mortality.
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Bruning AHL, Beld MVD, Laverge J, Welkers MRA, Kuil SD, Bruisten SM, van Dam AP, Stam AJ. Reptile-associated Salmonella urinary tract infection: a case report. Diagn Microbiol Infect Dis 2023; 105:115889. [PMID: 36758251 DOI: 10.1016/j.diagmicrobio.2022.115889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Revised: 12/27/2022] [Accepted: 12/30/2022] [Indexed: 01/05/2023]
Abstract
We present an 18-year-old woman with a urinary tract infection caused by Salmonella Oranienburg. S. Oranienburg was isolated from her pet snake and confirmed as the source of infection using whole genome sequencing. Our case demonstrates the risk of acquiring reptile-associated salmonellosis and stretches the need for awareness to prevent these infections.
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Wu D, Wen C, Rao H, Jia H, Liu Q, Abualigah L. Modified reptile search algorithm with multi-hunting coordination strategy for global optimization problems. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:10090-10134. [PMID: 37322925 DOI: 10.3934/mbe.2023443] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
The reptile search algorithm (RSA) is a bionic algorithm proposed by Abualigah. et al. in 2020. RSA simulates the whole process of crocodiles encircling and catching prey. Specifically, the encircling stage includes high walking and belly walking, and the hunting stage includes hunting coordination and cooperation. However, in the middle and later stages of the iteration, most search agents will move towards the optimal solution. However, if the optimal solution falls into local optimum, the population will fall into stagnation. Therefore, RSA cannot converge when solving complex problems. To enable RSA to solve more problems, this paper proposes a multi-hunting coordination strategy by combining Lagrange interpolation and teaching-learning-based optimization (TLBO) algorithm's student stage. Multi-hunting cooperation strategy will make multiple search agents coordinate with each other. Compared with the hunting cooperation strategy in the original RSA, the multi-hunting cooperation strategy has been greatly improved RSA's global capability. Moreover, considering RSA's weak ability to jump out of the local optimum in the middle and later stages, this paper adds the Lens pposition-based learning (LOBL) and restart strategy. Based on the above strategy, a modified reptile search algorithm with a multi-hunting coordination strategy (MRSA) is proposed. To verify the above strategies' effectiveness for RSA, 23 benchmark and CEC2020 functions were used to test MRSA's performance. In addition, MRSA's solutions to six engineering problems reflected MRSA's engineering applicability. It can be seen from the experiment that MRSA has better performance in solving test functions and engineering problems.
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Murali G, Iwamura T, Meiri S, Roll U. Future temperature extremes threaten land vertebrates. Nature 2023; 615:461-467. [PMID: 36653454 DOI: 10.1038/s41586-022-05606-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2021] [Accepted: 11/28/2022] [Indexed: 01/19/2023]
Abstract
The frequency, duration, and intensity of extreme thermal events are increasing and are projected to further increase by the end of the century1,2. Despite the considerable consequences of temperature extremes on biological systems3-8, we do not know which species and locations are most exposed worldwide. Here we provide a global assessment of land vertebrates' exposures to future extreme thermal events. We use daily maximum temperature data from 1950 to 2099 to quantify future exposure to high frequency, duration, and intensity of extreme thermal events to land vertebrates. Under a high greenhouse gas emission scenario (Shared Socioeconomic Pathway 5-8.5 (SSP5-8.5); 4.4 °C warmer world), 41.0% of all land vertebrates (31.1% mammals, 25.8% birds, 55.5% amphibians and 51.0% reptiles) will be exposed to extreme thermal events beyond their historical levels in at least half their distribution by 2099. Under intermediate-high (SSP3-7.0; 3.6 °C warmer world) and intermediate (SSP2-4.5; 2.7 °C warmer world) emission scenarios, estimates for all vertebrates are 28.8% and 15.1%, respectively. Importantly, a low-emission future (SSP1-2.6, 1.8 °C warmer world) will greatly reduce the overall exposure of vertebrates (6.1% of species) and can fully prevent exposure in many species assemblages. Mid-latitude assemblages (desert, shrubland, and grassland biomes), rather than tropics9,10, will face the most severe exposure to future extreme thermal events. By 2099, under SSP5-8.5, on average 3,773 species of land vertebrates (11.2%) will face extreme thermal events for more than half a year period. Overall, future extreme thermal events will force many species and assemblages into constant severe thermal stress. Deep greenhouse gas emissions cuts are urgently needed to limit species' exposure to thermal extremes.
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Fenelon JC, Bennetts A, Anthwal N, Pyne M, Johnston SD, Evans AR, Tucker AS, Renfree MB. Getting out of a mammalian egg: the egg tooth and caruncle of the echidna. Dev Biol 2023; 495:8-18. [PMID: 36565838 DOI: 10.1016/j.ydbio.2022.12.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2022] [Revised: 12/16/2022] [Accepted: 12/18/2022] [Indexed: 12/24/2022]
Abstract
In the echidna, after development in utero, the egg is laid in the pouch and incubated for 10 days. During this time, the fetuses develop an egg tooth and caruncle to help them hatch. Using rare and unprecedented access to limited echidna pre- and post-hatching tissues, development of the egg tooth and caruncle were assessed by micro-CT, histology and immunofluorescence. Unlike therian tooth germs that develop by placode invagination, the echidna egg tooth developed by evagination, similar to the first teeth in some reptiles and fish. The egg tooth ankylosed to the premaxilla, rather than forming a tooth root with ligamentous attachment found in other mammals, with loss of the egg tooth associated with high levels of activity odontoclasts and apoptosis. The caruncle formed as a separate mineralisation from the adjacent nasal capsule, and as observed in birds and turtles, the nasal region epithelium on top of the nose expressed markers of cornification. Together, this highlights that the monotreme egg tooth shares many similarities with typical reptilian teeth, suggesting that this tooth has been conserved from a common ancestor of mammals and reptiles.
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Iglesias‐Carrasco M, Medina I, Ord TJ. Global effects of forest modification on herpetofauna communities. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2023; 37:e13998. [PMID: 36073314 PMCID: PMC10099509 DOI: 10.1111/cobi.13998] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Revised: 08/10/2022] [Accepted: 08/19/2022] [Indexed: 06/15/2023]
Abstract
As the area covered by human-modified environments grows, it is increasingly important to understand the responses of communities to the novel habitats created, especially for sensitive and threatened taxa. We aimed to improve understanding of the major evolutionary and ecological processes that shape the assemblage of amphibian and reptile communities to forest modifications. To this end, we compiled a global data set of amphibian and reptile surveys in natural, disturbed (burned, logged), and transformed (monocultures, polyspecific plantations) forest communities to assess the richness, phylogenetic diversity, and composition of those communities, as well as the morphological disparity among taxa between natural and modified forest habitats. Forest transformations led to a diversity reduction of 15.46% relative to the statistically nonsignificant effect of disturbances. Transformations also led to a community composition that was 39.4% dissimilar to that on natural forests, compared with 16.1% difference in disturbances. Modifications did not affect the morphological disparity of communities (p = 0.167 and 0.744), and we found little evidence of taxon-specific responses to anthropic impacts. Monocultures and polyspecific plantations detrimentally affected the conservation and ecological value of both amphibian and reptile communities and altered the evolutionary processes shaping these communities, whereas forests with lower impact disturbances might, to some extent, serve as reservoirs of species. Although different mechanisms might buffer the collapse of herpetological communities, preserving remaining natural forests is necessary for conserving communities in the face of future anthropic pressures.
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70
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Wanger TC, Brook BW, Evans T, Tscharntke T. Pesticides reduce tropical amphibian and reptile diversity in agricultural landscapes in Indonesia. PeerJ 2023; 11:e15046. [PMID: 36967985 PMCID: PMC10035417 DOI: 10.7717/peerj.15046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Accepted: 02/21/2023] [Indexed: 03/29/2023] Open
Abstract
Pesticide use on tropical crops has increased substantially in recent decades, posing a threat to biodiversity and ecosystem services. Amphibians and reptiles are common in tropical agricultural landscapes, but few field studies measure pesticide impacts on these taxa. Here we combine 1-year of correlative data with an experimental field approach from Indonesia. We show that while pesticide application cannot predict amphibian or reptile diversity patterns in cocoa plantations, our experimental exposure to herbicides and insecticides in vegetable gardens eliminated amphibians, whereas reptiles were less impacted by insecticide and not affected by herbicide exposure. The pesticide-driven loss of a common amphibian species known to be a pest-control agent (mainly invertebrate predation) suggests a strong indirect negative effect of pesticides on this service. We recommend landscape-based Integrated Pest Management and additional ecotoxicological studies on amphibians and reptiles to underpin a regulatory framework and to assure recognition and protection of their ecosystem services.
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71
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Prata DA, Chagas-de-Souza D, Coêlho TA, Viana LA, Corrêa LL, Kawashita-Ribeiro RA. Rhinella major (Anura: Bufonidade): a new paratenic host of Centrorhynchus sp. (Palaeacanthocephala: Centrorhynchidae) in Brazilian Amazon. ANNALS OF PARASITOLOGY 2023; 69:75-78. [PMID: 38164747] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Received: 05/01/2023] [Accepted: 11/26/2023] [Indexed: 01/03/2024]
Abstract
Acanthocephalans are grouped in a single phylum, having a cosmopolitan distribution and subdivided into several genera. Although species of this parasite genus have birds and mammals as definitive hosts, they have been reported in amphibians and reptiles, and have been noted as paratenic hosts. In this study we report the record of Rhinella major as a new paratenic host for the Centrorhynchus sp. from an urban area of the Brazilian Amazon. In this study, for the morphometric measurements to take place, the parasitic specimens found were fixed and preserved in an alcoholic liquid medium and the identification of the parasites found were confirmed by specialized literature. The parasitological statistical parameters followed the proposed ecological concepts, calculating the parasite prevalence, intensity, average intensity and average abundance indices with confidence intervals. In the present study, two morphotypes of Acontochephala were found parasitizing R. major. In this study we report the record of R. major as a new paratenic host for the Centrorhynchus sp.
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Wirth W, Forzán MJ, Schwarzkopf L, Ariel E. Pathogenesis of Bohle iridovirus infection in Krefft's freshwater turtle hatchlings ( Emydura macquarii krefftii). Vet Pathol 2023; 60:139-150. [PMID: 36086869 DOI: 10.1177/03009858221122591] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
Ranaviruses have been detected in over 12 families of reptiles including many genera of turtles, tortoises, and terrapins, but the pathogenesis of these infections is still poorly understood. Krefft's river turtle hatchlings (N = 36; Emydura macquarii krefftii) were inoculated intramuscularly with Bohle iridovirus (BIV, Ranavirus, isolate) or saline, and euthanized at 9 timepoints (3 infected and 1 control per timepoint) over a 24-day period. Samples of lung, liver, kidney, and spleen were collected for quantitative polymerase chain reaction (PCR); internal organs, skin, and oral cavity samples were fixed for histopathological examination. The earliest lesions, at 8 days postinoculation (dpi), were lymphocytic inflammation of the skin and fibrinoid necrosis of regional vessels at the site of inoculation, and mild ulcerative necrosis with lymphocytic and heterophilic inflammation in the oral, nasal, and tongue mucosae. Fibrinonecrotic foci with heterophilic inflammation were detected in spleen and gonads at 16 dpi. Multifocal hepatic necrosis, heterophilic inflammation, and occasional basophilic intracytoplasmic inclusion bodies were observed at 20 dpi, along with ulcerative lymphocytic and heterophilic tracheitis and bronchitis. Tracheitis, bronchitis, and rare bone marrow necrosis were present at 24 dpi. Of the viscera tested for ranaviral DNA by PCR, the liver and spleen had the highest viral loads throughout infection, and thus appeared to be major targets of viral replication. Testing of whole blood by qPCR was the most-effective ante-mortem method for detecting ranaviral infection compared with oral swabs. This study represents the first time-dependent pathogenesis study of a ranaviral infection in turtles.
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Sladky KK. Treatment of Pain in Reptiles. Vet Clin North Am Exot Anim Pract 2023; 26:43-64. [PMID: 36402488 DOI: 10.1016/j.cvex.2022.07.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
This chapter provides an overview of our current understanding of clinical analgesic use in reptiles. Currently, μ-opioid agonist drugs are the standard of care for analgesia in reptiles. Reptile pain is no longer considered a necessary part of recovery to keep the reptile from becoming active too early. Rather, treating pain allows for the reptile to begin normalizing their behavior. This recognition of pain and analgesia certainly benefits our reptile patients and greatly improves reptile welfare, but it also benefits our students and house officers, who will carry the torch and continue to demand excellence in reptile medicine.
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de Jonge MMJ, Gallego‐Zamorano J, Huijbregts MAJ, Schipper AM, Benítez‐López A. The impacts of linear infrastructure on terrestrial vertebrate populations: A trait-based approach. GLOBAL CHANGE BIOLOGY 2022; 28:7217-7233. [PMID: 36166319 PMCID: PMC9827953 DOI: 10.1111/gcb.16450] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Accepted: 09/23/2022] [Indexed: 05/05/2023]
Abstract
While linear infrastructures, such as roads and power lines, are vital to human development, they may also have negative impacts on wildlife populations up to several kilometres into the surrounding environment (infrastructure-effect zones, IEZs). However, species-specific IEZs are not available for the vast majority of species, hampering global assessments of infrastructure impacts on wildlife. Here, we synthesized 253 studies worldwide to quantify the magnitude and spatial extent of infrastructure impacts on the abundance of 792 vertebrate species. We also identified the extent to which species traits, infrastructure type and habitat modulate IEZs for vertebrate species. Our results reveal contrasting responses across taxa based on the local context and species traits. Carnivorous mammals were generally more abundant in the proximity of infrastructure. In turn, medium- to large-sized non-carnivorous mammals (>1 kg) were less abundant near infrastructure across habitats, while their smaller counterparts were more abundant close to infrastructure in open habitats. Bird abundance was reduced near infrastructure with larger IEZs for non-carnivorous than for carnivorous species. Furthermore, birds experienced larger IEZs in closed (carnivores: ≈130 m, non-carnivores: >1 km) compared to open habitats (carnivores: ≈70 m, non-carnivores: ≈470 m). Reptiles were more abundant near infrastructure in closed habitats but not in open habitats where abundances were reduced within an IEZ of ≈90 m. Finally, IEZs were relatively small in amphibians (<30 m). These results indicate that infrastructure impact assessments should differentiate IEZs across species and local contexts in order to capture the variety of responses to infrastructure. Our trait-based synthetic approach can be applied in large-scale assessments of the impacts of current and future infrastructure developments across multiple species, including those for which infrastructure responses are not known from empirical data.
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Mooney ED, Maho T, Bevitt JJ, Reisz RR. An intriguing new diapsid reptile with evidence of mandibulo-dental pathology from the early Permian of Oklahoma revealed by neutron tomography. PLoS One 2022; 17:e0276772. [PMID: 36449456 PMCID: PMC9710763 DOI: 10.1371/journal.pone.0276772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 10/08/2022] [Indexed: 12/02/2022] Open
Abstract
The initial stages of diapsid evolution, the clade that includes extant reptiles and the majority of extinct reptilian taxa, is surprisingly poorly known. Notwithstanding the hypothesis that varanopids are diapsids rather than synapsids, there are only four araeoscelidians and one neodiapsid present in the late Carboniferous and early Permian. Here we describe the fragmentary remains of a very unusual new amniote from the famous cave deposits near Richards Spur, Oklahoma, that we recognize as a diapsid reptile, readily distinguishable from all other early amniotes by the unique dentition and lower jaw anatomy. The teeth have an unusual reeding pattern on the crown (long parallel ridges with rounded surfaces), with some teeth posteriorly tilted and strongly recurved, while a ventral protuberance forms the anterior terminus of the dentary. Overall, the lower jaw is unusually slender with a flattened ventral surface formed by the dentary and splenial anteriorly and the angular in the mid-region. The presence of a very slender triradiate jugal revealed through computed tomography confirms the existence of a large lower temporal fenestra, while the medial edge of the maxilla and the anatomy of the palatine confirm the presence of a large suborbital fenestra. Computed tomography of this new taxon reveals maxillary innervation that is characteristically reptile, not synapsid. Although no other definitively identifiable skull roof elements exist, the suborbital fenestra borders preserved on the palatine and maxilla supports the hypothesis that this is a diapsid reptile. Interestingly, the right dentary shows evidence of pathology, a rarely reported occurrence in Paleozoic amniotes, with several empty tooth sockets filled by bone. This small predator with delicate subthecodont implanted dentition provides strong evidence that diapsid reptiles were already diversifying rapidly in the early Permian, but likely were relatively rare members of terrestrial vertebrate assemblages.
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