Active biomonitoring of palladium, platinum, and rhodium emissions from road traffic using transplanted moss

The use of transplanted moss (Pleurozium schreberi) in active biomonitoring of traffic-related emissions of Pd, Pt, and Rh was studied. Moss mats were transplanted to three locations along highway E75 (in Oulu, Finland) at three different distances from the highway. Five samples were collected from a background site after the same exposure period. Mass fractions of Pd, Pt, and Rh as well as mass fractions of 18 other elements were determined in these samples. The results indicated that P. schreberi is well suited for active biomonitoring of Pd, Pt, and Rh. Mass fractions above the background values were observed in the samples exposed to traffic-related emissions. When the results were compared with those of the other elements, high correlations of Pd, Pt, and Rh with commonly traffic-related elements (e.g., Cu, Ni, Sb, Zn, etc.) were found. It was also found that the amounts of Pd, Pt, and Rh in moss samples decreased when the distance to the highway increased. This trend gives evidence for the suitability of P. schreberi for active biomonitoring of Pd, Pt, and Rh. Furthermore, it can be concluded that the mass fractions determined in this study provide valuable evidence about the current state of Pd, Pt, and Rh emissions in Oulu, Finland.

Natural and anthropogenic radioactivity in the environment of Kopaonik mountain, Serbia

To evaluate the state of the environment in Kopaonik, a mountain in Serbia, the activity concentrations of (4) K, (226)Ra, (232)Th and (137)Cs in five different types of environmental samples are determined by gamma ray spectrometry, and radiological hazard due to terrestrial radionuclides is calculated. The mean activity concentrations of natural radionuclides in the soil are higher than the global average. However, with an exception of two sampling locations, the external radiation hazard index is below one, implying an insignificant radiation hazard. Apart from (40)K, content of the natural radionuclides is predominantly below minimum detectable activities in grass and cow milk, but not in mosses. Although (137)Cs is present in the soil, grass, mosses and herbal plants, its specific activity in cow milk is below minimum detectable activity. Amongst the investigated herbal plants, Vaccinium myrtillus L. shows accumulating properties, as a high content of (137)Cs is detected therein. Therefore, moderation is advised in consuming Vaccinium myrtillus L. tea.

Evolutionary Conservation of Xylan Biosynthetic Genes in Selaginella moellendorffii and Physcomitrella patens

Xylan is a major cross-linking hemicellulose in secondary walls of vascular tissues, and the recruitment of xylan as a secondary wall component was suggested to be a pivotal event for the evolution of vascular tissues. To decipher the evolution of xylan structure and xylan biosynthetic genes, we analyzed xylan substitution patterns and characterized genes mediating methylation of glucuronic acid (GlcA) side chains in xylan of the model seedless vascular plant, Selaginella moellendorffii, and investigated GT43 genes from S. moellendorffii and the model non-vascular plant, Physcomitrella patens, for their roles in xylan biosynthesis. Using nuclear magentic resonance spectroscopy, we have demonstrated that S. moellendorffii xylan consists of β-1,4-linked xylosyl residues subsituted solely with methylated GlcA residues and that xylans from both S. moellendorffii and P. patens are acetylated at O-2 and O-3. To investigate genes responsible for GlcA methylation of xylan, we identified two DUF579 genes in the S. moellendorffii genome and showed that one of them, SmGXM, encodes a glucuronoxylan methyltransferase capable of adding the methyl group onto the GlcA side chain of xylooligomers. Furthermore, we revealed that the two GT43 genes in S. moellendorffii, SmGT43A and SmGT43B, are functional orthologs of the Arabidopsis xylan backbone biosynthetic genes IRX9 and IRX14, respectively, indicating the evolutionary conservation of the involvement of two functionally non-redundant groups of GT43 genes in xylan backbone biosynthesis between seedless and seed vascular plants. Among the five GT43 genes in P. patens, PpGT43A was found to be a functional ortholog of Arabidopsis IRX9, suggesting that the recruitment of GT43 genes in xylan backbone biosynthesis occurred when non-vascular plants appeared on land.

Spatially valid data of atmospheric deposition of heavy metals and nitrogen derived by moss surveys for pollution risk assessments of ecosystems

For analysing element input into ecosystems and associated risks due to atmospheric deposition, element concentrations in moss provide complementary and time-integrated data at high spatial resolution every 5 years since 1990. The paper reviews (1) minimum sample sizes needed for reliable, statistical estimation of mean values at four different spatial scales (European and national level as well as landscape-specific level covering Europe and single countries); (2) trends of heavy metal (HM) and nitrogen (N) concentrations in moss in Europe (1990-2010); (3) correlations between concentrations of HM in moss and soil specimens collected across Norway (1990-2010); and (4) canopy drip-induced site-specific variation of N concentration in moss sampled in seven European countries (1990-2013). While the minimum sample sizes on the European and national level were achieved without exception, for some ecological land classes and elements, the coverage with sampling sites should be improved. The decline in emission and subsequent atmospheric deposition of HM across Europe has resulted in decreasing HM concentrations in moss between 1990 and 2010. In contrast, hardly any changes were observed for N in moss between 2005, when N was included into the survey for the first time, and 2010. In Norway, both, the moss and the soil survey data sets, were correlated, indicating a decrease of HM concentrations in moss and soil. At the site level, the average N deposition inside of forests was almost three times higher than the average N deposition outside of forests.

Atmospheric deposition of heavy metals in Wuxi, China: estimation based on native moss analysis

We studied atmospheric deposition of heavy metals in Wuxi, China, using moss (Haplocladium microphyllum and H. angustifolium) as a biomonitoring agent. Moss samples were collected from 49 sites determined by a systematic sampling method. The top layer of soil on each site was also sampled. No significant correlation (P < 0.05) was observed between the moss and soil concentrations for any of the six heavy metal elements (Cd, Cr, Cu, Ni, Pb, and Zn), indicating that the soil substrate had little effect on the heavy metal concentrations in the moss materials. The metal enrichment capacity of the moss material, characterized by the concentration ratio between the moss and soil samples for each heavy metal, was topped by Cd and then followed by Zn, Pb, Cu, Cr, and Ni, respectively. Significant (P < 0.05) correlations were found among the six elements in mosses, suggesting potential anthropogenic inputs of these heavy metal pollutants. Based on concentrations of the heavy metals in mosses and the calculated contamination factors, we evaluated the contamination level of each heavy metal on the 49 sampling sites. Spatial distribution maps of heavy metal deposition for each element were interpolated using ArcGIS 9.0. A total pollution coefficient was calculated for each sampling site to identify the seriously polluted areas in the region.

Structural modelling and transcriptional responses highlight a clade of PpKAI2-LIKE genes as candidate receptors for strigolactones in Physcomitrella patens

A set of PpKAI2 - LIKE paralogs that may encode strigolactone receptors in Physcomitrella patens were identified through evolutionary, structural, and transcriptional analyses, suggesting that strigolactone perception may have evolved independently in basal land plants in a similar manner as spermatophytes. Carotenoid-derived compounds known as strigolactones are a new class of plant hormones that modulate development and interactions with parasitic plants and arbuscular mycorrhizal fungi. The strigolactone receptor protein DWARF14 (D14) belongs to the α/β hydrolase family. D14 is closely related to KARRIKIN INSENSITIVE2 (KAI2), a receptor of smoke-derived germination stimulants called karrikins. Strigolactone and karrikin structures share a butenolide ring that is necessary for bioactivity. Charophyte algae and basal land plants produce strigolactones that influence their development. However phylogenetic studies suggest that D14 is absent from algae, moss, and liverwort genomes, raising the question of how these basal plants perceive strigolactones. Strigolactone perception during seed germination putatively evolved in parasitic plants through gene duplication and neofunctionalization of KAI2 paralogs. The moss Physcomitrella patens shows an increase in KAI2 gene copy number, similar to parasitic plants. In this study we investigated whether P. patens KAI2-LIKE (PpKAI2L) genes may contribute to strigolactone perception. Based on phylogenetic analyses and homology modelling, we predict that a clade of PpKAI2L proteins have enlarged ligand-binding cavities, similar to D14. We observed that some PpKAI2L genes have transcriptional responses to the synthetic strigolactone GR24 racemate or its enantiomers. These responses were influenced by light and dark conditions. Moreover, (+)-GR24 seems to be the active enantiomer that induces the transcriptional responses of PpKAI2L genes. We hypothesize that members of specific PpKAI2L clades are candidate strigolactone receptors in moss.

A taxonomic revision of Ulota Mohr (Orthotrichaceae) in South and Central America

Twenty-three species of Ulota from South and Central America have previously been reported. A revision of the species suggests that number should be reduced to thirteen (Ulota billbuckii, Ulota fuegiana, Ulota germana, Ulota larrainii, Ulota luteola, Ulota macrocalycina, Ulota macrodontia, Ulota magellanica, Ulota phyllantha, Ulota pusilla, Ulota pycnophylla, Ulota rhytiore and Ulota streptodon) with eight names (Ulota aurantiaca = U. pycnophylla, Ulota carinata = U.fuegiana, Ulota fernandeziana = U. fuegiana, Ulota glabella = U. fuegiana, Ulota lativentrosa = U. pusilla, Ulota lobbiana = U. germana, Ulota pygmaeothecia = U. luteola and Ulota rufula = U. germana) reduced to synonyms, as well as three varieties (U. fuegiana var. crispata = U. fuegiana, U. rufula var. fagicola = U. germana and U. rufula var. patagonica = U. fuegiana). The taxonomic status of two names (Ulota angustissima and Ulota ventricosa) remains ambiguous. The typification of five names (U. macrodontia, U. magellanica, Ulota nothofagi, Ulota persubulata and U. pygmaeothecia) is proposed here. With the first report of Ulota crispa for South America, the total number of species accepted here for this region is fourteen. Two species (i.e. U. phyllantha and U. crispa) occur in both Hemispheres, one species (i.e. U. rhytiore) is only present in the Northern Hemisphere, whereas the remaining eleven species are all restricted to the Southern Hemisphere. Among them, nine (U. billbuckii, U. fuegiana, U. larrainii, U. macrocalycina, U. macrodontia, U. magellanica, U. pusilla, U. pycnophylla and U. streptodon) are restricted to South America, and two (U. germana and U. luteola) are distributed in South America and Oceania. The peristomes and spores of seven accepted species are illustrated in SEM micrographs. A key to all accepted species as well as descriptions, illustrations, synonyms, ecological and geographic distributions, and discussions are provided.

Analysis of environmental factors determining development and succession in biological soil crusts

Biological soil crusts play important ecological functions in arid and semi-arid regions, while different crust successional patterns appeared in different regions. Therefore in this study, the environmental conditions between Shapotou (with cyanobacterial, lichen and moss crusts) and Dalate Banner (with only cyanobacterial and moss crusts) regions of China were compared to investigate why lichen crusts only appeared in Shapotou; at the same time, artificial moss inoculation was conducted to find out the environmental factors promoting crust succession to moss stage. The results showed lichen crusts always developed from cyanobacterial crusts, which provide not only the stable soil surface, but also the biomass basis for lichen formation; furthermore, addition of crust physicochemical characteristics (primarily silt content) play a facilitating effect on lichen emergence (R(2)=0.53). The inoculation experiment demonstrated early crust soil surface and enough water holding content (>4%) provided the essential guarantee for moss germination. Our results show that there is heterogeneity in crust succession in different regions, which may be mainly affected by the ambient soil microenvironments. It is concluded that a positive feedback mechanism is expected between crust succession and ambient soil microenvironments; while a negative feedback mechanism forms between crust succession and free living cyanobacteria and algae.

Biomonitoring heavy metal contaminations by moss visible parameters

Traditional sampling for heavy metal monitoring is a time-consuming and inconvenient method, which also does not indicate contaminants non-invasively and instantaneously. Moss is sensitive to heavy metals and is therefore considered a pollution indicator. However, it is unknown what kind physiological parameters can indicate metal contaminations quickly and non-invasively. Here, we systematically examined the effects of six heavy metals on physiological parameters and photosynthetic activities of two moss species grown in aquatic media or moist soil surface. We suggest that a phenotype with anthocyanin accumulation pattern and chlorosis pattern and two chlorophyll fluorescence parameters with their images can roughly reflect metal species groups, concentrations and differences between the two moss species. In other words, metal contaminations could be roughly estimated visually using the naked eye. Enzymatic and non-enzymatic anti-oxidative abilities and photosynthetic protein contents of Eurhynchium eustegium were higher than those of Taxiphyllum taxirameum, indicating their differential metal tolerance. Neither anti-oxidative abilities nor photosynthetic proteins were found to be ideal indicators. This study provides new ideas to monitor heavy metals rapidly and non-invasively in water or on wetland and moist soil surface.

Characterizing the distribution of selected PBDEs in soil, moss and reindeer dung at Ny-Ålesund of the Arctic

Distribution of 12 selected polybrominated diphenyl ethers (PBDEs) was characterized in soil, moss and reindeer dung samples collected simultaneously at Ny-Ålesund of the Arctic. The average PBDE concentrations were 42 pg/g (dry weight) in soil, 122 pg/g in moss and 72 pg/g in reindeer dung. Significant log/log-linear relationship was observed between the soil/moss quotients (QSM) and the sub-cooled liquid vapor pressures of PBDEs (r(2)=0.80). Moreover, excellent log/log-linear relationships between QSM and the octanol/air partition coefficients as well as between the moss/dung quotient (QMD) and the octanol/water partition coefficients of PBDEs were also observed, indicating that the physicochemical properties of PBDEs are appropriate parameters for characterizing the distribution of PBDEs in soil, moss and reindeer dung at Ny-Ålesund. Capsule abstract: Significant log-linear correlations were observed between physicochemical properties of PBDEs and their soil/moss (moss/dung) quotients.

Multi-element atmospheric deposition in Macedonia studied by the moss biomonitoring technique

Moss biomonitoring technique using moss species Homolothecium lutescens (Hedw.) Robins and Hypnum cupressiforme (Hedw.) was applied to air pollution studies in the Republic of Macedonia. The study was performed in the framework of the International Cooperative Programme on Effects of Air Pollution on Natural Vegetation and Crops under the auspices of the United Nations Economic Commission for Europe (UNECE) Convention on Long-Range Transboundary Air Pollution (LRTAP). The presence of 47 elements was determined by instrumental epithermal neutron activation analysis, atomic absorption spectrometry and atomic emission spectrometry with inductively coupled plasma. Normality of the datasets of elements was investigated, and Box-Cox transformation was used in order to achieve normal distributions of the data. Different pollution sources were identified and characterized using principal component analysis (PCA). Distribution maps were prepared to point out the regions most affected by pollution and to relate this to the known sources of contamination. The cities of Veles, Skopje, Tetovo, Radoviš and Kavadarci were determined to experience particular environmental stress. Moreover, three reactivated lead-zinc mines were also shown to contribute to a high content of lead and zinc in the eastern part of the country. However, a comparison with the previous moss survey conducted in 2005 showed a decreasing trend of pollution elements that are usually associated with emission from industrial activities.

Metal and proton adsorption capacities of natural and cloned Sphagnum mosses

Terrestrial mosses are commonly used as bioindicators of atmospheric pollution. However, there is a lack of standardization of the biomonitoring preparation technique and the efficiency of metal adsorption by various moss species is poorly known. This is especially true for in vitro-cultivated moss clones, which are promising candidates for a standardized moss-bag technique. We studied the adsorption of copper and zinc on naturally grown Sphagnum peat moss in comparison with in vitro-cultivated Sphagnum palustre samples in order to provide their physico-chemical characterization and to test the possibility of using cloned peat mosses as bioindicators within the protocol of moss-bag technique. We demonstrate that in vitro-grown clones of S. palustre exhibit acid-base properties similar to those of naturally grown Sphagnum samples, whereas the zinc adsorption capacity of the clones is approx. twice higher than that of the samples from the field. At the same time, the field samples adsorbed 30-50% higher amount of Cu(2+) compared to that of the clones. This contrast may be related to fine differences in the bulk chemical composition, specific surface area, morphological features, type and abundance of binding sites at the cell surfaces and in the aqueous solution of natural and cloned Sphagnum. The clones exhibited much lower concentration of most metal pollutants in their tissues relative to the natural samples thus making the former better indicators of low metal loading. Overall, in vitro-produced clones of S. palustre can be considered as an adequate, environmentally benign substitution for protected natural Sphagnum sp. samples to be used in moss-bags for atmospheric monitoring.

δ(34)S values and S concentrations in native and transplanted Pleurozium schreberi in a heavily industrialised area

Sulphur is an element found in surplus in anthropogenic areas and one of the minerals responsible for the development of acid rains. The analysis of stable S isotopes provides a powerful tool for studying various aspects of the biogeochemical circulation of sulphur. δ(34)S values and S concentrations were determined in a 90-day experiment with the native moss Pleurozium schreberi from rural, urban and industrial sites in Upper Silesia in southern Poland. At the same time P. schreberi from a control site was transplanted to the same rural, urban and industrial sites and the δ(34)S values and S concentrations were determined in the same 90-day experiment. (34)S enrichment (up to 4.7‰) in the mosses tested indicates that these plants responded to environmental pollution stress. Sulphur isotopic composition in the transplanted P. schreberi was related to S concentrations in this species after 90 days of the experiment. Higher δ(34)S values and S concentrations were noted in native mosses than in those transplanted from rural and urban sites while an opposite situation was reported in industrial sites. The transplanted P. schreberi was a better sulphur bioindicator than the native moss in more polluted industrial sites and worse in less polluted rural and urban sites.

Lichen, moss and soil in resolving the occurrence of semi-volatile organic compounds on the southeastern Tibetan Plateau, China

This study investigated a wide range of semi-volatile organic compounds (SVOCs), including 28 persistent organochlorine pesticides (OCPs), 18 polychlorinated biphenyls (PCBs), 13 polybrominated diphenyl ethers (PBDEs), and 3 hexabromocyclododecane (HBCD) congeners in lichen, moss and soil collected from the southeastern Tibetan Plateau, China. This allows research provides insight into elevation gradient distributions and possible cold trapping effects of SVOCs in this high mountain area, and compares lichens and mosses as air passive samplers for indicating SVOC occurrences. DDTs, endosulfans, HCHs and hexachlorobenzene predominated in all of the samples. Source analysis indicted that there were fresh inputs of DDTs and HCHs in the sampling region. Lichens and mosses shared commonalities in revealing the profiles and levels of SVOCs based on their lipid-content-normalized concentrations. The concentrations of 12 OCPs and 14 PCBs in lichens were significantly linearly correlated with altitudes, whereas the correlations for mosses and soil with altitudes were insignificant. Both a frequency distribution diagram and the Mountain Contamination Potential Model indicated that SVOCs with specific values of log KOA (8-11) and log KWA (2-4) had relative high mountain contamination potential on the Tibetan Plateau.

Analysis of ent-kaurenoic acid by ultra-performance liquid chromatography-tandem mass spectrometry

ent-Kaurenoic acid (KA) is a key intermediate connected to a phytohormone gibberellin. To date, the general procedure for quantifying KA is by using traditional gas chromatography–mass spectrometry (GC–MS). In contrast, gibberellins, which are more hydrophilic than KA, can be easily quantified by liquid chromatography-tandem mass spectrometry (LC–MS/MS). In this study, we have established a new method to quantify KA by LC–MS/MS by taking advantage of a key feature of KA, namely the lack of fragmentation that occurs in MS/MS when electrospray ionization (ESI) is in the negative mode. Q1 and Q3 were adopted as identical channels for the multiple reaction monitoring of KA. The method was validated by comparing with the results obtained by selected ion monitoring in GC–MS. This new method could be applicable for the quantification of other hydrophobic compounds.

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ent-Kaurenoic acid (KA) can be quantified by LC–MS/MS.

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Detection limit of KA acid was 0.59 ng ml⁻¹.

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We set Q1 and Q3 to the same MRM channel.

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Endogenous KA in a moss was detected and quantified.

Zn isotope fractionation in a pristine larch forest on permafrost-dominated soils in Central Siberia

Stable Zn isotopes fractionation was studied in main biogeochemical compartments of a pristine larch forest of Central Siberia developed over continuous permafrost basalt rocks. Two north- and south-oriented watershed slopes having distinctly different vegetation biomass and active layer depth were used as natural proxy for predicting possible future climate changes occurring in this region. In addition, peat bog zone exhibiting totally different vegetation, hydrology and soil temperature regime has been studied. The isotopic composition of soil profile from Central Siberia is rather constant with a δ(66)Zn value around 0.2‰ close to the value of various basalts. Zn isotopic composition in mosses (Sphagnum fuscum and Pleurozium schreberi) exhibits differences between surface layers presenting values from 0.14 to 0.2‰ and bottom layers presenting significantly higher values (0.5 - 0.7‰) than the underlain mineral surface. The humification of both dead moss and larch needles leads to retain the fraction where Zn bound most strongly thus releasing the lighter isotopes in solution and preserving the heavy isotopes in the humification products, in general accord with previous experimental and modeling works [GCA 75:7632-7643, 2011]. The larch (Larix gmelinii) from North and South-facing slopes is enriched in heavy isotopes compared to soil reservoir while larch from Sphagnum peatbog is enriched in light isotopes. This difference may result from stronger complexation of Zn by organic ligands and humification products in the peat bog compared to mineral surfaces in North- and South-facing slope. During the course of the growing period, Zn followed the behavior of macronutrients with a decrease of concentration from June to September. During this period, an enrichment of larch needles by heavier Zn isotopes is observed in the various habitats. We suggest that the increase of the depth of rooting zone, and the decrease of DOC and Zn concentration in soil solution from the root uptake zone with progressively thawing soil could provoke heavy isotopes to become more available for the larch roots at the end of the vegetative season compared to the beginning of the season, because the decrease of DOC will facilitate the uptake of heavy isotope as it will be less retained in strong organic complexes.

Sample pretreatment to differentiate between bioconcentration and atmospheric deposition of polycyclic aromatic hydrocarbons in mosses

In this first approach a comparison using different sample pretreatment methodologies has been made to differentiate between total atmospheric deposition and bioconcentration of polycyclic aromatic hydrocarbons (PAHs) in moss samples (Brachythecium rutabulum). Samples were collected in a densely polluted urban area in Barakaldo (Biscay, Basque Country) and submitted to different cleaning procedures with the aim to remove as many deposited atmospheric particles as possible. Analysis by means of Scanning Electron Microscopy coupled to Energy Dispersive Spectroscopy (SEM-EDS) allowed to quantify the removal efficiency of each cleaning procedure and to chemically characterise particles still present in the pre-cleaned sample. Cleaning moss samples twice with deionised water in an ultrasound bath showed up as the most suitable way to remove solid particles deposited on their surface. Discerning between bioconcentration and atmospheric deposition is therefore possible after GC-MS quantitative analysis of non-washed and washed moss samples.

Photoprotective and toxicological activities of extracts from the Antarctic moss Sanionia uncinata

Background:

The Antarctic moss Sanionia uncinata (Hedw.) Loeske has shown high ultraviolet (UV)-absorbers content after exposition to high levels of UV-B radiation and can be an important source of antioxidants.

Objective:

The aim was to investigate photoprotection and mutagenicity by the aqueous extract (AE) and hydroethanolic extract (HE) from the Antarctic moss S. uncinata.

Materials and Methods:

Photoprotective activities were determined through survival curves of Escherichia coli strains, after UV irradiation in an aqueous solution of thymine and in vitro sun protection factor (SPF). The Salmonella/microsome assays were applied to assess the mutagenicity.

Results:

Both extracts induced photoprotection against UV-C radiation. The AE showed a higher protection than the hydroethanolic one against UV-induced thymine dimerization. The SPFs were low in both extracts. In association to benzophenone-3 a significant increase in the SPF was detected for the AE, and a significant decrease was induced by the HE. No mutagenicity was found in the both extracts. Furthermore, it was observed absence of cytotoxicity.

Conclusion:

Water-extractable compounds seem to contribute on photoprotection of this Antarctic moss.

Mosses as an integrating tool for monitoring PAH atmospheric deposition: comparison with total deposition and evaluation of bioconcentration factors. A year-long case-study

Polycyclic aromatic hydrocarbon (PAH) atmospheric deposition was evaluated at a remote site in Northern Spain using moss biomonitoring with Hylocomium splendens (Hedw.) Schimp., and by measuring the total deposition fluxes of PAHs. The year-long study allowed seasonal variations of PAH content in mosses to be observed, and these followed a similar trend to those of PAH fluxes in total deposition. Generally, atmospheric deposition of PAHs is greater in winter than in summer, due to more PAH emissions from domestic heating, less photoreactivity of the compounds, and intense leaching of the atmosphere by wet deposition. However, fractionation of these molecules between the environmental compartments occurs: PAH fluxes in total deposition and PAH concentrations in mosses are correlated with their solubility (r=0.852, p<0.01) and lipophilic properties (KOW, r=0.768, p<0.01), respectively. This annual study therefore showed that atmospheric PAH fluxes can be estimated with moss biomonitoring data if the bioconcentration or 'enriching' factors are known.

Bacterial-biota dynamics of eight bryophyte species from different ecosystems

Despite the importance of bryophyte-associated microorganisms in various ecological aspects including their crucial roles in the soil-enrichment of organic mass and N2 fixation, nonetheless, little is known about the microbial diversity of the bryophyte phyllospheres (epi-/endophytes). To get insights into bacterial community structures and their dynamics on the bryophyte habitats in different ecosystems and their potential biological roles, we utilized the 16S rRNA gene PCR-DGGE and subsequent phylogenetic analyses to investigate the bacterial community of eight bryophyte species collected from three distinct ecosystems from western Japan. Forty-two bacterial species belonging to γ-proteobacteria and Firmicutes with 71.4% and 28.6%, respectively, were identified among 90 DGGE gel band population. These DGGE-bands were assigned to 13 different genera with obvious predomination the genus Clostridium with 21.4% from the total bacterial community. These analyses provide new insights into bryophyte-associated bacteria and their relations to the ecosystems.

Field determination and QSPR prediction of equilibrium-status soil/vegetation partition coefficient of PCDD/Fs

Characterizing pseudo equilibrium-status soil/vegetation partition coefficient KSV, the quotient of respective concentrations in soil and vegetation of a certain substance at remote background areas, is essential in ecological risk assessment, however few previous attempts have been made for field determination and developing validated and reproducible structure-based estimates. In this study, KSV was calculated based on measurements of seventeen 2,3,7,8-substituted PCDD/F congeners in soil and moss (Dicranum angustum), and rouzi grass (Thylacospermum caespitosum) of two background sites, Ny-Ålesund of the Arctic and Zhangmu-Nyalam region of the Tibet Plateau, respectively. By both fugacity modeling and stepwise regression of field data, the air-water partition coefficient (KAW) and aqueous solubility (SW) were identified as the influential physicochemical properties. Furthermore, validated quantitative structure-property relationship (QSPR) model was developed to extrapolate the KSV prediction to all 210 PCDD/F congeners. Molecular polarizability, molecular size and molecular energy demonstrated leading effects on KSV.

Tc1-like transposable elements in plant genomes

BACKGROUND

The Tc1/mariner superfamily of transposable elements (TEs) is widespread in animal genomes. Mariner-like elements, which bear a DDD triad catalytic motif, have been identified in a wide range of flowering plant species. However, as the founding member of the superfamily, Tc1-like elements that bear a DD34E triad catalytic motif are only known to unikonts (animals, fungi, and Entamoeba).

RESULTS

Here we report the identification of Tc1-like elements (TLEs) in plant genomes. These elements bear the four terminal nucleotides and the characteristic DD34E triad motif of Tc1 element. The two TLE families (PpTc1, PpTc2) identified in the moss (Physcomitrella patens) genome contain highly similar copies. Multiple copies of PpTc1 are actively transcribed and the transcripts encode intact full length transposase coding sequences. TLEs are also found in angiosperm genome sequence databases of rice (Oryza sativa), dwarf birch (Betula nana), cabbage (Brassica rapa), hemp (Cannabis sativa), barley (Hordium valgare), lettuce (Lactuta sativa), poplar (Populus trichocarpa), pear (Pyrus x bretschneideri), and wheat (Triticum urartu).

CONCLUSIONS

This study extends the occurrence of TLEs to the plant phylum. The elements in the moss genome have amplified recently and may still be capable of transposition. The TLEs are also present in angiosperm genomes, but apparently much less abundant than in moss.

Effects of nitrogen additions on biomass, stoichiometry and nutrient pools of moss Rhytidium rugosum in a boreal forest in Northeast China

Global nitrogen (N) deposition has been enhanced with anthropogenic N emissions, and its impacts on mosses are receiving more and more attention. This study investigates how N deposition influence the biomass and stoichiometry of moss Rhytidium rugosum, using a 3-year N enrichment experiment with 0, 2, 5 and 10 g N m(-2) yr(-1) in a boreal forest in Northeast China. Low N additions caused an N redundancy and moderate to high N additions resulted in a biomass loss. N additions reduced biomass ratios of green to brown tissues and increased N and phosphorus (P) contents, suggesting changes in photosynthetic capacity and litter decomposition. Biomass N pools showed a unimodal response to the N additions, and P pools decreased under moderate and high N additions. Our findings indicate significant stoichiometric and biomass changes caused by N deposition may lead to a substantial carbon and nutrient loss in boreal moss carpets.

Biomonitoring persistent organic pollutants in the atmosphere with mosses: performance and application

Persistent organic pollutants (POPs) have aroused environmentalists and public concerns due to their toxicity, bioaccumulation and persistency in the environment. However, monitoring atmospheric POPs using conventional instrumental methods is difficult and expensive, and POP levels in air samples represent an instantaneous value at a sampling time. Biomonitoring methods can overcome this limitation, because biomonitors can accumulate POPs, serve as long-term integrators of POPs and provide reliable information to assess the impact of pollutants on the biota and various ecosystems. Recently, mosses are increasingly employed to monitor atmospheric POPs. Mosses have been applied to indicate POP pollution levels in the remote continent of Antarctica, trace distribution of POPs in the vicinity of pollution sources, describe the spatial patterns at the regional scale, and monitor the changes in the pollution intensity along time. In the future, many aspects need to be improved and strengthened: (i) the relationship between the concentrations of POPs in mosses and in the atmosphere (different size particulates and vapor phases); and (ii) the application of biomonitoring with mosses in human health studies.

Characterization of the GPI-anchored lipid transfer proteins in the moss Physcomitrella patens

The non-specific lipid transfer proteins (nsLTPs) are characterized by a compact structure with a central hydrophobic cavity very suitable for binding hydrophobic ligands, such as lipids. The nsLTPs are encoded by large gene families in all land plant lineages, but seem to be absent from green algae. The nsLTPs are classified to different types based on molecular weight, sequence similarity, intron position or spacing between the cysteine residues. The Type G nsLTPs (LTPGs) have a GPI-anchor in the C-terminal region which may attach the protein to the exterior side of the plasma membrane. Here, we present the first characterization of nsLTPs from an early diverged plant, the moss Physcomitrella patens. Moss LTPGs were heterologously produced and purified from Pichia pastoris. The purified moss LTPGs were found to be extremely heat stable and showed a binding preference for unsaturated fatty acids. Structural modeling implied that high alanine content could be important for the heat stability. Lipid profiling revealed that cutin monomers, such as C16 and C18 mono- and di-hydroxylated fatty acids, could be identified in P. patens. Expression of a moss LTPG-YFP fusion revealed localization to the plasma membrane. The expressions of many of the moss LTPGs were found to be upregulated during drought and cold treatments.