126
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El Hajj A, Lucas B, Barbot A, Antony R, Ratier B, Aldissi M. Organic solar cells using a ZnO/Cu/ZnO anode deposited by ion beam sputtering at room temperature for flexible devices. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY 2013; 13:5227-5232. [PMID: 23901557 DOI: 10.1166/jnn.2013.7502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
The development of indium-free transparent conductive oxides (TCOs) on polymer substrates for flexible devices requires deposition at low temperatures and a limited thermal treatment. In this paper, we investigated the optical and electrical properties of ZnO/Cu/ZnO multi-layer electrodes obtained by ion beam sputtering at room temperature for flexible optoelectronic devices. This multilayer structure has the advantage of adjusting the layer thickness to favor antireflection and surface plasmon resonance of the metallic layer. We found that the optimal electrode is made up of a 10 nm-thick Cu layer between two 40 nm-thick ZnO layers, which results in a sheet resistance of 12 omega/(see symbol), a high transmittance of 85% in the visible range, and the highest figure of merit of 5.4 x 10(-3) (see symbol)/omega. A P3HT:PCBM-based solar cell showed a power conversion efficiency (PCE) of 2.26% using the optimized ZnO (40 nm)/Cu (10 nm)/ZnO (40 nm) anode.
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127
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Tan Y, Luan Q, Liu F, Akhmadaliev S, Zhou S, Chen F. Swift carbon ion irradiated Nd:YAG ceramic optical waveguide amplifier. OPTICS EXPRESS 2013; 21:13992-13997. [PMID: 23787589 DOI: 10.1364/oe.21.013992] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
A high-gain optical waveguide amplifier has been realized in a channel waveguide platform of Nd:YAG ceramic produced by swift carbon ion irradiation with metal masking. The waveguide is single mode at wavelength of 810 and 1064 nm, and with the enhanced fluorescence intensity at around 1064 nm due to the Nd(3+) ion emissions. In conjunction with the low propagation loss of the waveguide, about 26.3 dB/cm of the small signal gain at 1064 nm is achieved with an 18 ns pulse laser as the seeder under the 810-nm laser excitation. This work suggests the carbon ion irradiated Nd:YAG waveguides could serve as efficient integrated amplifiers for the signal amplification.
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128
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Keskinbora K, Grévent C, Bechtel M, Weigand M, Goering E, Nadzeyka A, Peto L, Rehbein S, Schneider G, Follath R, Vila-Comamala J, Yan H, Schütz G. Ion beam lithography for Fresnel zone plates in X-ray microscopy. OPTICS EXPRESS 2013; 21:11747-11756. [PMID: 23736396 DOI: 10.1364/oe.21.011747] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Fresnel Zone Plates (FZP) are to date very successful focusing optics for X-rays. Established methods of fabrication are rather complex and based on electron beam lithography (EBL). Here, we show that ion beam lithography (IBL) may advantageously simplify their preparation. A FZP operable from the extreme UV to the limit of the hard X-ray was prepared and tested from 450 eV to 1500 eV. The trapezoidal profile of the FZP favorably activates its 2nd order focus. The FZP with an outermost zone width of 100 nm allows the visualization of features down to 61, 31 and 21 nm in the 1st, 2nd and 3rd order focus respectively. Measured efficiencies in the 1st and 2nd order of diffraction reach the theoretical predictions.
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129
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Ma Y, Wang Z, Zhu M, Yu C, Cao Y, Zhang D, Zhou G. Increased lipid productivity and TAG content in Nannochloropsis by heavy-ion irradiation mutagenesis. BIORESOURCE TECHNOLOGY 2013; 136:360-7. [PMID: 23567703 DOI: 10.1016/j.biortech.2013.03.020] [Citation(s) in RCA: 57] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2012] [Revised: 03/04/2013] [Accepted: 03/06/2013] [Indexed: 05/10/2023]
Abstract
One mutant (HP-1) with higher growth rate was obtained from Nannochloropsis oceanica IMET1 by heavy-ion irradiation mutagenesis. Compared to the wild type, the biomass accumulation and maximum growth rate of HP-1 were individually increased by 19% and 6%, and its lipid productivity was increased by 28% from 211 to 271 mg L(-1) d(-1). Subsequently analysis indicated photosynthetic efficiency of HP-1 was higher than that of wild type during cultivation. Further, lipid composition analysis indicated TAG content of HP-1 was 14% higher, while polar lipid content was 15% lower than that of wild type. Moreover, fatty acid profiles analysis revealed no significant variation was found between the two strains. The mutant is discussed in terms of its comparative advantage over the wild type with respect to its potential utilization for biodiesel production. Owing to its higher lipid productivity and TAG content, HP-1 could be considered as a valuable candidate for microalgal biodiesel production.
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130
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Mayer M, Keskinbora K, Grévent C, Szeghalmi A, Knez M, Weigand M, Snigirev A, Snigireva I, Schütz G. Efficient focusing of 8 keV X-rays with multilayer Fresnel zone plates fabricated by atomic layer deposition and focused ion beam milling. JOURNAL OF SYNCHROTRON RADIATION 2013; 20:433-40. [PMID: 23592622 PMCID: PMC3628450 DOI: 10.1107/s0909049513006602] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/26/2012] [Accepted: 03/07/2013] [Indexed: 06/02/2023]
Abstract
Fresnel zone plates (FZPs) recently showed significant improvement by focusing soft X-rays down to ~10 nm. In contrast to soft X-rays, generally a very high aspect ratio FZP is needed for efficient focusing of hard X-rays. Therefore, FZPs had limited success in the hard X-ray range owing to difficulties of manufacturing high-aspect-ratio zone plates using conventional techniques. Here, employing a method of fabrication based on atomic layer deposition (ALD) and focused ion beam (FIB) milling, FZPs with very high aspect ratios were prepared. Such multilayer FZPs with outermost zone widths of 10 and 35 nm and aspect ratios of up to 243 were tested for their focusing properties at 8 keV and shown to focus hard X-rays efficiently. This success was enabled by the outstanding layer quality thanks to ALD. Via the use of FIB for slicing the multilayer structures, desired aspect ratios could be obtained by precisely controlling the thickness. Experimental diffraction efficiencies of multilayer FZPs fabricated via this combination reached up to 15.58% at 8 keV. In addition, scanning transmission X-ray microscopy experiments at 1.5 keV were carried out using one of the multilayer FZPs and resolved a 60 nm feature size. Finally, the prospective of different material combinations with various outermost zone widths at 8 and 17 keV is discussed in the light of the coupled wave theory and the thin-grating approximation. Al2O3/Ir is outlined as a promising future material candidate for extremely high resolution with a theoretical efficiency of more than 20% for as small an outermost zone width as 10 nm at 17 keV.
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131
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Kim MS, Nam G, Leem JY. Photoluminescence studies of ZnO nanorods grown by plasma-assisted molecular beam epitaxy. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY 2013; 13:3582-3585. [PMID: 23858907 DOI: 10.1166/jnn.2013.7320] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Metal catalyst-free ZnO nanorods were grown on PS with buffer layers grown at 450 degrees C by plasma-assisted molecular beam epitaxy. Room temperature and temperature-dependent photoluminescence were carried out to investigate the optical properties of the ZnO nanorods with the average diameter of 120 nm and length of 300 nm. Three emission peaks, free excition, neutral-donor exciton, and free electron-to-neutral acceptor, were observed at 10 K. Huang-Rhys factor S of the ZnO nanorods was 0.978, which is much higher than that of ZnO thin films. The values of Varshni's empirical equation fitting parameters were alpha = 4 x 10(-3) eV/K, beta = 4.1 x 10(4) K, and E9(0) = 3.388 eV and the activation energy was about 96 meV.
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132
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Friedrich T, Scholz U, ElsäSser T, Durante M, Scholz M. Systematic analysis of RBE and related quantities using a database of cell survival experiments with ion beam irradiation. JOURNAL OF RADIATION RESEARCH 2013; 54:494-514. [PMID: 23266948 PMCID: PMC3650740 DOI: 10.1093/jrr/rrs114] [Citation(s) in RCA: 169] [Impact Index Per Article: 15.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2012] [Revised: 10/30/2012] [Accepted: 11/02/2012] [Indexed: 05/22/2023]
Abstract
For tumor therapy with light ions and for experimental aspects in particle radiobiology the relative biological effectiveness (RBE) is an important quantity to describe the increased effectiveness of particle radiation. By establishing and analysing a database of ion and photon cell survival data, some remarkable properties of RBE-related quantities were observed. The database consists of 855 in vitro cell survival experiments after ion and photon irradiation. The experiments comprise curves obtained in different labs, using different ion species, different irradiation modalities, the whole range of accessible energies and linear energy transfers (LETs) and various cell types. Each survival curve has been parameterized using the linear-quadratic (LQ) model. The photon parameters, α and β, appear to be slightly anti-correlated, which might point toward an underlying biological mechanism. The RBE values derived from the survival curves support the known dependence of RBE on LET, on particle species and dose. A positive correlation of RBE with the ratio α/β of the photon LQ parameters is found at low doses, which unexpectedly changes to a negative correlation at high doses. Furthermore, we investigated the course of the β coefficient of the LQ model with increasing LET, finding typically a slight initial increase and a final falloff to zero. The observed fluctuations in RBE values of comparable experiments resemble overall RBE uncertainties, which is of relevance for treatment planning. The database can also be used for extensive testing of RBE models. We thus compare simulations with the local effect model to achieve this goal.
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133
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Hirobe T, Eguchi-Kasai K, Sugaya K, Murakami M. Effects of low-dose heavy ions on embryonic development in mice and on melanocyte differentiation in the epidermis and hair bulb. JOURNAL OF RADIATION RESEARCH 2013; 54:409-418. [PMID: 23230241 PMCID: PMC3650742 DOI: 10.1093/jrr/rrs116] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/28/2012] [Revised: 11/04/2012] [Accepted: 11/05/2012] [Indexed: 06/01/2023]
Abstract
The effects of prenatal low-dose irradiation with heavy ions on embryonic development in mice and on melanocyte differentiation are not well understood. We performed whole-body irradiation of pregnant C57BL/10J mice at embryonic Day 9 (E9) with a single dose of γ-rays, silicon, argon or iron ions. The number of living embryos and embryonic body weight at E18 decreased after exposure to heavy ions at high doses. Malformations such as small eyes and limb anomalies were observed in heavy-ion-treated embryos, but not in γ-ray-treated embryos. The frequency of abnormally curved tails was increased by exposure to γ-rays and argon and iron ions even at a dose of 0.1 Gy (P < 0.05). In contrast, a dose-dependent decrease in the number of epidermal melanoblasts/melanocytes and hair bulb melanocytes was observed after 0.1 Gy irradiation with γ-rays or heavy ions (P < 0.01). The decrease in the number of dorsal hair bulb melanocytes, dorsal and ventral epidermal melanoblasts/melanocytes and ventral hair bulb melanocytes was not necessarily correlated with the linear energy transfer of the radiation tested. Moreover, the effects of heavy ions were larger on the ventral skin than on the dorsal skin, indicating that the sensitivity of melanocytes to heavy ions differs between the dorsal and ventral skin. Taken together, these results suggest that the effects of the low-dose heavy ions differ between cell types and tissues, and the effects on the prenatal development of mice and melanocyte development are not necessarily greater than those of γ-rays.
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134
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Shirai H, Fujimori H, Gunji A, Maeda D, Hirai T, Poetsch AR, Harada H, Yoshida T, Sasai K, Okayasu R, Masutani M. Parg deficiency confers radio-sensitization through enhanced cell death in mouse ES cells exposed to various forms of ionizing radiation. Biochem Biophys Res Commun 2013; 435:100-6. [PMID: 23624507 DOI: 10.1016/j.bbrc.2013.04.048] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2013] [Accepted: 04/06/2013] [Indexed: 11/18/2022]
Abstract
Poly(ADP-ribose) glycohydrolase (Parg) is the main enzyme involved in poly(ADP-ribose) degradation. Here, the effects of Parg deficiency on sensitivity to low and high linear-energy-transfer (LET) radiation were investigated in mouse embryonic stem (ES) cells. Mouse Parg(-/-) and poly(ADP-ribose) polymerase-1 deficient (Parp-1(-/-)) ES cells were used and responses to low and high LET radiation were assessed by clonogenic survival and biochemical and biological analysis methods. Parg(-/-) cells were more sensitive to γ-irradiation than Parp-1(-/-) cells. Transient accumulation of poly(ADP-ribose) was enhanced in Parg(-/-) cells. Augmented levels of phosphorylated H2AX (γ-H2AX) from early phase were observed in Parg(-/-) ES cells. The induction level of p53 phophorylation at ser18 was similar in wild-type and Parp-1(-/-) cells and apoptotic cell death process was mainly observed in the both genotypes. These results suggested that the enhanced sensitivity of Parg(-/-) ES cells to γ-irradiation involved defective repair of DNA double strand breaks. The effects of Parg and Parp-1 deficiency on the ES cell response to carbon-ion irradiation (LET13 and 70 keV/μm) and Fe-ion irradiation (200 keV/μm) were also examined. Parg(-/-) cells were more sensitive to LET 70 keV/μm carbon-ion irradiation than Parp-1(-/-) cells. Enhanced apoptotic cell death also accompanied augmented levels of γ-H2AX in a biphasic manner peaked at 1 and 24h. The induction level of p53 phophorylation at ser18 was not different between wild-type and Parg(-/-) cells. The augmented level of poly(ADP-ribose) accumulation was noted after carbon-ion irradiation compared to γ-irradiation even in the wild-type cells. An enhanced poly(ADP-ribose) accumulation was further observed in Parg(-/-) cells. Both Parg(-/-) cells and Parp-1(-/-) cells did not show sensitization to Fe-ion irradiation. Parg deficiency sensitizes mouse ES cells to a wide therapeutic range of LET radiation through the effects on DNA double strand break repair responses and enhanced cell death.
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135
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Hu G, Fan Y, Zhang L, Yuan C, Wang J, Li W, Hu Q, Li F. Enhanced lipid productivity and photosynthesis efficiency in a Desmodesmus sp. mutant induced by heavy carbon ions. PLoS One 2013; 8:e60700. [PMID: 23593286 PMCID: PMC3621885 DOI: 10.1371/journal.pone.0060700] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2012] [Accepted: 03/01/2013] [Indexed: 11/30/2022] Open
Abstract
The unicellular green microalga Desmodesmus sp. S1 can produce more than 50% total lipid of cell dry weight under high light and nitrogen-limitation conditions. After irradiation by heavy 12C6+ ion beam of 10, 30, 60, 90 or 120 Gy, followed by screening of resulting mutants on 24-well microplates, more than 500 mutants were obtained. One of those, named D90G-19, exhibited lipid productivity of 0.298 g L−1⋅d−1, 20.6% higher than wild type, likely owing to an improved maximum quantum efficiency (Fv/Fm) of photosynthesis under stress. This work demonstrated that heavy-ion irradiation combined with high-throughput screening is an effective means for trait improvement. The resulting mutant D90G-19 may be used for enhanced lipid production.
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136
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Loucas BD, Cornforth MN. The LET dependence of unrepaired chromosome damage in human cells: a break too far? Radiat Res 2013; 179:393-405. [PMID: 23578187 PMCID: PMC6058738 DOI: 10.1667/rr3159.2] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Cytogenetic damage is among the few radiobiological end points that allow a precise distinction to be made between misrepaired damage, represented by exchange-type aberrations such as dicentrics and translocations, and unrepaired damage that leads to "open breaks". This latter category includes both terminal deletions and incomplete exchanges, whose different mechanisms of formation can be recognized by multicolor fluorescence in situ hybridization (mFISH). mFISH was used to examine the yields of chromosome aberrations at the first postirradiation mitosis in human fibroblasts and lymphocytes irradiated with ¹³⁷Cs γ rays, a radiation of low-linear energy transfer (LET), and two sources of high-LET radiation: α particles from ²³⁸Pu and 1 GeV/amu ⁵⁶Fe ions. In agreement with previous studies, our results show that irrespective of radiation quality, the overall level of misrepaired damage exceeds that of unrepaired damage by a large margin. The unrepaired component of damage produced by γ rays and α particles was remarkably similar, about 5%. On that basis it is difficult to justify the popular notion that the strong LET-dependence for aberration formation is due to unrepaired DNA double-strand breaks (DSBs) that, by virtue of their complexity at the nanometer scale, are qualitatively different in nature. In marked contrast, this unrejoined component rose to about 14% after exposure to Fe ions. A closer look at the unrepaired component revealed that most of this roughly threefold difference was derived from incomplete exchanges. Despite vast differences in LET, unrejoined breaks from incomplete exchanges were far more likely to occur among exchanges that involved more than two breakpoints. We attempted to reconcile these observations in the form of a hypothesis that predicts that exchanges, irrespective of LET, should exhibit an increasing tendency for incompleteness as the number of initial breaks destined to take part in the exchange increases. This effect, we argue is not caused by the number of initial breaks per se, but instead reflects the maximum distance over which proximate breaks can interact. This adds a spatial aspect to multi-break interactions that we call "A Break Too Far".
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137
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Ripault Q, Lee MW, Mériche F, Touam T, Courtois B, Ntsoenzok E, Peng LH, Fischer A, Boudrioua A. Investigation of a planar optical waveguide in 2D PPLN using helium implantation technique. OPTICS EXPRESS 2013; 21:7202-7208. [PMID: 23546104 DOI: 10.1364/oe.21.007202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
In this work, we report the investigation of a planar waveguide in a 2D periodically-poled lithium niobate (PPLN). The waveguide is fabricated by helium (He(+)) implantation at 2 MeV and a fluence of 1.5 x 10(16) ions/cm(2). Second harmonic generation (SHG) at 532 nm using a Q-switched laser and a CW laser diode at 1064 nm, was measured as a function of angular distribution and temperature. The experimental results show higher gain in SHG conversion efficiency in the waveguide than in the bulk 2D PPLN. In particular, SHGs from 2D reciprocal lattice vectors (RLV) are observed and studied.
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138
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Liu T, Liu P, Zhang L, Zhou YF, Yu XF, Zhao JH, Wang XL. Visible and near-infrared planar waveguide structure of polycrystalline zinc sulfide from C ions implantation. OPTICS EXPRESS 2013; 21:4671-4676. [PMID: 23481999 DOI: 10.1364/oe.21.004671] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
We report the fabrication of a planar waveguide in polycrystalline zinc sulfide by 6.0 MeV C ions implantation with a fluence of 5 × 10¹⁴ ion/cm² at room temperature. The near-field light intensity profiles in the visible and near-infrared bands are measured by the end-face coupling method with different laser sources. Investigation of the Raman spectra demonstrates that the microstructure of the polycrystalline zinc sulfide has no significant change after C ion implantation. The absorption spectra show that the implantation processes have no influence on the visible and infrared bands.
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139
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Sourribes MJL, Isakov I, Panfilova M, Warburton PA. Minimization of the contact resistance between InAs nanowires and metallic contacts. NANOTECHNOLOGY 2013; 24:045703. [PMID: 23299854 DOI: 10.1088/0957-4484/24/4/045703] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
We investigate different processes for optimizing the formation of Ohmic contacts to InAs nanowires. The nanowires are grown via molecular beam epitaxy without the use of metal catalysts. Metallic contacts are attached to the nanowires by using an electron beam lithography process. Before deposition of the contacts, the InAs nanowires are treated either by wet etching in an ammonium polysulfide (NH(4))(2)S(x) solution or by an argon milling process in order to remove a surface oxide layer. Two-point electrical measurements show that the resistance of the ammonium polysulfide-treated nanowires is two orders of magnitude lower than that of the untreated nanowires. The nanowires that are treated by the argon milling process show a resistance which is more than an order of magnitude lower than that of those treated with ammonium polysulfide. Four-point measurements allow us to extract an upper bound of 1.4 × 10(-7) Ω cm(2) for the contact resistivity of metallic contacts on nanowires treated by the argon milling process.
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140
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Afra B, Rodriguez MD, Trautmann C, Pakarinen OH, Djurabekova F, Nordlund K, Bierschenk T, Giulian R, Ridgway MC, Rizza G, Kirby N, Toulemonde M, Kluth P. SAXS investigations of the morphology of swift heavy ion tracks in α-quartz. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2013; 25:045006. [PMID: 23238277 DOI: 10.1088/0953-8984/25/4/045006] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The morphology of swift heavy ion tracks in crystalline α-quartz was investigated using small angle x-ray scattering (SAXS), molecular dynamics (MD) simulations and transmission electron microscopy. Tracks were generated by irradiation with heavy ions with energies between 27 MeV and 2.2 GeV. The analysis of the SAXS data indicates a density change of the tracks of ~2 ± 1% compared to the surrounding quartz matrix for all irradiation conditions. The track radii only show a weak dependence on the electronic energy loss at values above 17 keV nm(-1), in contrast to values previously reported from Rutherford backscattering spectrometry measurements and expectations from the inelastic thermal spike model. The MD simulations are in good agreement at low energy losses, yet predict larger radii than SAXS at high ion energies. The observed discrepancies are discussed with respect to the formation of a defective halo around an amorphous track core, the existence of high stresses and/or the possible presence of a boiling phase in quartz predicted by the inelastic thermal spike model.
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141
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Carr CE, Rowedder H, Vafadari C, Lui CS, Cascio E, Zuber MT, Ruvkun G. Radiation resistance of biological reagents for in situ life detection. ASTROBIOLOGY 2013; 13:68-78. [PMID: 23330963 DOI: 10.1089/ast.2012.0869] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Life on Mars, if it exists, may share a common ancestry with life on Earth derived from meteoritic transfer of microbes between the planets. One means to test this hypothesis is to isolate, detect, and sequence nucleic acids in situ on Mars, then search for similarities to known common features of life on Earth. Such an instrument would require biological and chemical components, such as polymerase and fluorescent dye molecules. We show that reagents necessary for detection and sequencing of DNA survive several analogues of the radiation expected during a 2-year mission to Mars, including proton (H-1), heavy ion (Fe-56, O-18), and neutron bombardment. Some reagents have reduced performance or fail at higher doses. Overall, our findings suggest it is feasible to utilize space instruments with biological components, particularly for mission durations of up to several years in environments without large accumulations of charged particles, such as the surface of Mars, and have implications for the meteoritic transfer of microbes between planets.
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142
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Hu G, Fan Y, Zhang L, Yuan C, Wang J, Li W, Hu Q, Li F. Enhanced lipid productivity and photosynthesis efficiency in a Desmodesmus sp. mutant induced by heavy carbon ions. PLoS One 2013. [PMID: 23593286 DOI: 10.137/journal.pone.0060700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/07/2023] Open
Abstract
The unicellular green microalga Desmodesmus sp. S1 can produce more than 50% total lipid of cell dry weight under high light and nitrogen-limitation conditions. After irradiation by heavy (12)C(6+) ion beam of 10, 30, 60, 90 or 120 Gy, followed by screening of resulting mutants on 24-well microplates, more than 500 mutants were obtained. One of those, named D90G-19, exhibited lipid productivity of 0.298 g L(-1)⋅d(-1), 20.6% higher than wild type, likely owing to an improved maximum quantum efficiency (Fv/Fm) of photosynthesis under stress. This work demonstrated that heavy-ion irradiation combined with high-throughput screening is an effective means for trait improvement. The resulting mutant D90G-19 may be used for enhanced lipid production.
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143
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Hashimoto S, Niita K, Matsuda N, Iwamoto Y, Iwase H, Sato T, Noda S, Ogawa T, Nakashima H, Fukahori T, Furuta T, Chiba S. [Features of PHITS and its application to medical physics]. IGAKU BUTSURI : NIHON IGAKU BUTSURI GAKKAI KIKANSHI = JAPANESE JOURNAL OF MEDICAL PHYSICS : AN OFFICIAL JOURNAL OF JAPAN SOCIETY OF MEDICAL PHYSICS 2013; 33:88-95. [PMID: 24575621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
PHITS is a general purpose Monte Carlo particle transport simulation code to analyze the transport in three-dimensional phase space and collisions of nearly all particles, including heavy ions, over wide energy range up to 100 GeV/u. Various quantities, such as particle fluence and deposition energies in materials, can be deduced using estimator functions "tally". Recently, a microdosimetric tally function was also developed to apply PHITS to medical physics. Owing to these features, PHITS has been used for medical applications, such as radiation therapy and protection.
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144
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Kawachi T, Katayose T. [Beam quality conversion factor]. IGAKU BUTSURI : NIHON IGAKU BUTSURI GAKKAI KIKANSHI = JAPANESE JOURNAL OF MEDICAL PHYSICS : AN OFFICIAL JOURNAL OF JAPAN SOCIETY OF MEDICAL PHYSICS 2013; 33:186-191. [PMID: 24893494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
This report describes the update of the beam quality conversion factor k(Q,Q0) of the standard dosimetry protocol in Japan. The k(Q,Q0) corrects for the difference between the response of an ionization chamber in the reference beam quality Q0 used for calibrating the chamber and in the actual user beam quality Q. All changes of k(Q,Q0) were caused by the perturbation correction factors which were recalculated by Monte Carlo simulation. With a calculation process, unsolved problems in this update are also discussed here.
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145
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Antonovic L, Brahme A, Furusawa Y, Toma-Dasu I. Radiobiological description of the LET dependence of the cell survival of oxic and anoxic cells irradiated by carbon ions. JOURNAL OF RADIATION RESEARCH 2013; 54:18-26. [PMID: 22915783 PMCID: PMC3534272 DOI: 10.1093/jrr/rrs070] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2012] [Revised: 07/16/2012] [Accepted: 07/17/2012] [Indexed: 05/24/2023]
Abstract
Light-ion radiation therapy against hypoxic tumors is highly curative due to reduced dependence on the presence of oxygen in the tumor at elevated linear energy transfer (LET) towards the Bragg peak. Clinical ion beams using spread-out Bragg peak (SOBP) are characterized by a wide spectrum of LET values. Accurate treatment optimization requires a method that can account for influence of the variation in response for a broad range of tumor hypoxia, absorbed doses and LETs. This paper presents a parameterization of the Repairable Conditionally-Repairable (RCR) cell survival model that can describe the survival of oxic and hypoxic cells over a wide range of LET values, and investigates the relationship between hypoxic radiation resistance and LET. The biological response model was tested by fitting cell survival data under oxic and anoxic conditions for V79 cells irradiated with LETs within the range of 30-500 keV/µm. The model provides good agreement with experimental cell survival data for the range of LET investigated, confirming the robustness of the parameterization method. This new version of the RCR model is suitable for describing the biological response of mixed populations of oxic and hypoxic cells and at the same time taking into account the distribution of doses and LETs in the incident beam and its variation with depth in tissue. The model offers a versatile tool for the selection of LET and dose required in the optimization of the therapeutic effect, without severely affecting normal tissue in realistic tumors presenting highly heterogeneous oxic and hypoxic regions.
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146
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Kazama Y, Fujiwara MT, Takehisa H, Ohbu S, Saito H, Ichida H, Hayashi Y, Abe T. Characterization of a heavy-ion induced white flower mutant of allotetraploid Nicotiana tabacum. PLANT CELL REPORTS 2013; 32:11-9. [PMID: 22930364 DOI: 10.1007/s00299-012-1336-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2012] [Revised: 08/09/2012] [Accepted: 08/09/2012] [Indexed: 05/24/2023]
Abstract
KEY MESSAGE : We characterized a white flower mutant of allotetraploid N. tabacum as a DFR-deficient mutant; one copy of DFR has a cultivar-specific frameshift, while the other was deleted by heavy-ion irradiation. In most plants, white-flowered mutants have some kind of deficiency or defect in their anthocyanin biosynthetic pathway. Nicotiana tabacum normally has pink petals, in which cyanidin is the main colored anthocyanidin. When a relevant gene in the cyanidin biosynthetic pathway is mutated, the petals show a white color. Previously, we generated white-flowered mutants of N. tabacum by heavy-ion irradiation, which is accepted as an effective mutagen. In this study, we determined which gene was responsible for the white-flowered phenotype of one of these mutants, cv. Xanthi white flower 1 (xwf1). Southern blot analysis using a DNA fragment of the dihydroflavonol 4-reductase (DFR) gene as a probe showed that the xwf1 mutant lacked signals that were present in wild-type genomic DNAs. Sequence analysis demonstrated that one copy of the DFR gene (NtDFR2) was absent from the genome of the xwf1 mutant. The other copy of the DFR gene (NtDFR1) contained a single-base deletion resulting in a frameshift mutation, which is a spontaneous mutation in cv. Xanthi. Introduction of NtDFR2 cDNA into the petal limbs of xwf1 by particle bombardment resulted in production of the pink-colored cells, whereas introduction of NtDFR1 cDNA did not. These results indicate that xwf1 is a DFR-deficient mutant. One copy of NtDFR1 harbors a spontaneous frameshift mutation, while the other copy of NtDFR2 was deleted by heavy-ion beam irradiation.
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147
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Shinsho K, Koba Y, Tamatsu S, Sakurai N, Wakabayashi G, Fukuda K. [Thermoluminescence Slab Dosimeter]. IGAKU BUTSURI : NIHON IGAKU BUTSURI GAKKAI KIKANSHI = JAPANESE JOURNAL OF MEDICAL PHYSICS : AN OFFICIAL JOURNAL OF JAPAN SOCIETY OF MEDICAL PHYSICS 2013; 33:137-144. [PMID: 24893451] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
In 1953 F. Daniels et al. used the property of thermoluminescence in dosimetry for the first time. Since then, numerous TLD have been developed. 2D TLD was investigated for the first time in 1972 by P Broadhead. However, due to excessive fading, difficulties with handling and the time required for measurements, development stalled. At the current time, the majority of TLD are used in small scale, localized dosimetry with a wide dynamic range and personal dosimeters for exposure management. Urushiyama et. al. have taken advantage of the commoditization of CCD cameras in recent years--making large area, high resolution imaging easier--to introduce and develop a 2D TLD. It is expected that these developments will give rise to a new generation of applications for 2D TL dosimetry. This paper introduces the "TL Slab Dosimeter" developed jointly by Urushiyama et. al. and our team, its measurement system and several typical usage scenarios.
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148
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Wang Z, Ma Y, Mu R, Sun C, Zhang D, Wang Y. [Improved lipid productivity of Nannochloropsis by heavy-ion irradiation mutagenesis]. SHENG WU GONG CHENG XUE BAO = CHINESE JOURNAL OF BIOTECHNOLOGY 2013; 29:119-122. [PMID: 23631126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Nannochloropsis has been considered as a promising feedstock for biodiesel production in recent years. To improve its lipid productivity, heavy-ion irradiation mutagenesis, an effectively breeding method used in plants and microorganisms was applied in Nannochloropsis oceanica OZ-1. After large-scale screening using Imaging-PAM and microplate-reader, two mutants (HP-1 and HP-2) with higher growth rate were isolated from the wild type N. oceanica. Subsequently analysis showed that after 18 days of cultivation biomass accumulation of the HP-1 and HP-2 mutant was increased by 18% and 26% respectively compare to the wild type. Total lipid productivity of the HP-1 and HP-2 mutant was 295 mg/(L x d) and 275 mg/(L x d), respectively, whereas that of the wild type was 247 mg/(L x d). Both mutants showed significantly advantage over their wild type concerning biomass accumulation and lipid productivity.
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149
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Oyama TG, Oshima A, Washio M, Tagawa S. Fabrication of nanobeads from nanocups by controlling scission/crosslinking in organic polymer materials. NANOTECHNOLOGY 2012; 23:495307. [PMID: 23165355 DOI: 10.1088/0957-4484/23/49/495307] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The development of several kinds of micro/nanofabrication techniques has resulted in many innovations in the micro/nanodevices that support today's science and technology. With feature miniaturization, the fabrication tools have shifted from light to ionizing radiation. Here, we propose a simple micro/nanofabrication technique for organic materials using a scanning beam (SB) of ionizing radiation. By controlling the scission/crosslinking of the material via three-dimensional energy-deposition distribution of the SB, appropriate solvents can easily peel off only the crosslinked region from the bulk material. The technique was demonstrated using a focused ion beam and a chlorinated organic polymer. The polymer underwent main-chain scission upon irradiation, but it crosslinked after high-dose irradiation. Appropriate solvents could easily peel off only the crosslinked region from the bulk material. The technique, 'nanobead from nanocup', enabled the production of desired structures such as nanowires and nanomembranes. It can be also applied to the micro/nanofabrication of functional materials.
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150
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Toyoshima Y, Takahashi A, Tanaka H, Watanabe J, Mogi Y, Yamazaki T, Hamada R, Iwashita K, Satoh K, Narumi I. Lethal and mutagenic effects of ion beams and γ-rays in Aspergillus oryzae. Mutat Res 2012; 740:43-49. [PMID: 23280012 DOI: 10.1016/j.mrfmmm.2012.12.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2012] [Revised: 12/18/2012] [Accepted: 12/20/2012] [Indexed: 06/01/2023]
Abstract
Aspergillus oryzae is a fungus that is used widely in traditional Japanese fermentation industries. In this study, the lethal and mutagenic effects of different linear energy transfer (LET) radiation in freeze-dried conidia of A. oryzae were investigated. The lethal effect, which was evaluated by a 90% lethal dose, was dependent on the LET value of the ionizing radiation. The most lethal ionizing radiation among that tested was (12)C(5+) ion beams with an LET of 121keV/μm. The (12)C(5+) ion beams had a 3.6-times higher lethal effect than low-LET (0.2keV/μm) γ-rays. The mutagenic effect was evaluated by the frequency of selenate resistant mutants. (12)C(6+) ion beams with an LET of 86keV/μm were the most effective in inducing selenate resistance. The mutant frequency following exposure to (12)C(6+) ion beams increased with an increase in dose and reached 3.47×10(-3) at 700Gy. In the dose range from 0 to 700Gy, (12)C(5+) ion beams were the second most effective in inducing selenate resistance, the mutant frequency of which reached a maximum peak (1.67×10(-3)) at 400Gy. To elucidate the characteristics of mutation induced by ionizing radiation, mutations in the sulphate permease gene (sB) and ATP sulfurylase gene (sC) loci, the loss of function of which results in a selenate resistant phenotype, were compared between (12)C(5+) ion beams and γ-rays. We detected all types of transversions and transitions. For frameshifts, the frequency of a +1 frameshift was the highest in all cases. Although the incidence of deletions >2bp was generally low, deletions >20bp were characteristic for (12)C(5+) ion beams. γ-rays had a tendency to generate mutants carrying a multitude of mutations in the same locus. Both forms of radiation also induced genome-wide large-scale mutations including chromosome rearrangements and large deletions. These results provide new basic insights into the mutation breeding of A. oryzae using ionizing radiation.
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