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Ariaeenejad S, Barani M, Roostaee M, Lohrasbi-Nejad A, Mohammadi-Nejad G, Hosseini Salekdeh G. Enhanced pollutant degradation via green-synthesized core-shell mesoporous Si@Fe magnetic nanoparticles immobilized with metagenomic laccase. Int J Biol Macromol 2024; 278:134813. [PMID: 39154675 DOI: 10.1016/j.ijbiomac.2024.134813] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2024] [Revised: 07/31/2024] [Accepted: 08/14/2024] [Indexed: 08/20/2024]
Abstract
With rapid industrial expansion, environmental pollution from emerging contaminants has increased, posing severe ecosystem threats. Laccases offer an eco-friendly solution for degrading hazardous substances, but their use as free-form biocatalysts face challenges. This study immobilized laccase (PersiLac1) on green-synthesized Si@Fe nanoparticles (MSFM NPs) to remove pollutants like Malachite Green-containing wastewater and degrade plastic films. Characterization techniques (FTIR, VSM, XRD, SEM, EDS, BET) confirmed the properties and structure of MSFM NPs, revealing a surface area of 31.297 m2.g-1 and a pore diameter of 12.267 nm. The immobilized PersiLac1 showed enhanced activity across various temperatures and pH levels, retaining over 82 % activity after 15 cycles at 80°C with minimal leaching. It demonstrated higher stability, half-life, and decimal reduction time than free laccase. Under 1 M NaCl, its activity was 1.8 times higher than the non-immobilized enzyme. The immobilized laccase removed 98.11 % of Malachite Green-containing wastewater and retained 82.92 % activity over twenty cycles of dye removal. Additionally, FTIR and SEM confirmed superior plastic degradation under saline conditions. These findings suggest that immobilizing PersiLac1 on magnetic nanoparticles enhances its function and potential for contaminant removal. Future research should focus on scalable, cost-effective laccase immobilization methods for large-scale environmental applications.
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Affiliation(s)
- Shohreh Ariaeenejad
- Department of Systems and Synthetic Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), Karaj, Iran.
| | - Mahmood Barani
- Medical Mycology and Bacteriology Research Center, Kerman University of Medical Sciences, 76169-13555 Kerman, Iran; Department of Chemistry, Faculty of Nano and Bio Science and Technology, Persian Gulf University, Bushehr 75168, Iran.
| | - Maryam Roostaee
- Department of Chemistry, Faculty of Sciences, Vali-e-Asr University of Rafsanjan, Rafsanjan, Iran
| | - Azadeh Lohrasbi-Nejad
- Department of Agricultural Biotechnology, Shahid Bahonar University of Kerman, Kerman, Iran; Institute of Plant Production (IPP), Afzalipour Research Institute (ARI), Shahid Bahonar University of Kerman, Kerman, Iran
| | - Ghasem Mohammadi-Nejad
- Department of Agronomy and Plant Breeding, College of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran; Institute of Plant Production (IPP), Afzalipour Research Institute (ARI), Shahid Bahonar University of Kerman, Kerman, Iran
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2
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Sánchez-Morán H, Kaar JL, Schwartz DK. Combinatorial High-Throughput Screening of Complex Polymeric Enzyme Immobilization Supports. J Am Chem Soc 2024; 146:9112-9123. [PMID: 38500441 DOI: 10.1021/jacs.3c14273] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/20/2024]
Abstract
Recent advances have demonstrated the promise of complex multicomponent polymeric supports to enable supra-biological enzyme performance. However, the discovery of such supports has been limited by time-consuming, low-throughput synthesis and screening. Here, we describe a novel combinatorial and high-throughput platform that enables rapid screening of complex and heterogeneous copolymer brushes as enzyme immobilization supports, named combinatorial high-throughput enzyme support screening (CHESS). Using a 384-well plate format, we synthesized arrays of three-component polymer brushes in the microwells using photoactivated surface-initiated polymerization and immobilized enzymes in situ. The utility of CHESS to identify optimal immobilization supports under thermally and chemically denaturing conditions was demonstrated usingBacillus subtilisLipase A (LipA). The identification of supports with optimal compositions was validated by immobilizing LipA on polymer-brush-modified biocatalyst particles. We further demonstrated that CHESS could be used to predict the optimal composition of polymer brushes a priori for the previously unexplored enzyme, alkaline phosphatase (AlkP). Our findings demonstrate that CHESS represents a predictable and reliable platform for dramatically accelerating the search of chemical compositions for immobilization supports and further facilitates the discovery of biocompatible and stabilizing materials.
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Affiliation(s)
- Héctor Sánchez-Morán
- Department of Chemical and Biological Engineering, University of Colorado, Campus Box 596, Boulder, Colorado 80309, United States
| | - Joel L Kaar
- Department of Chemical and Biological Engineering, University of Colorado, Campus Box 596, Boulder, Colorado 80309, United States
| | - Daniel K Schwartz
- Department of Chemical and Biological Engineering, University of Colorado, Campus Box 596, Boulder, Colorado 80309, United States
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Khiari O, Bouzemi N, Sánchez-Montero JM, Alcántara AR. Easy and Versatile Technique for the Preparation of Stable and Active Lipase-Based CLEA-like Copolymers by Using Two Homofunctional Cross-Linking Agents: Application to the Preparation of Enantiopure Ibuprofen. Int J Mol Sci 2023; 24:13664. [PMID: 37686470 PMCID: PMC10487927 DOI: 10.3390/ijms241713664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2023] [Revised: 08/26/2023] [Accepted: 08/30/2023] [Indexed: 09/10/2023] Open
Abstract
An easy and versatile method was designed and applied successfully to obtain access to lipase-based cross-linked-enzyme aggregate-like copolymers (CLEA-LCs) using one-pot, consecutive cross-linking steps using two types of homobifunctional cross-linkers (glutaraldehyde and putrescine), mediated with amine activation through pH alteration (pH jump) as a key step in the process. Six lipases were utilised in order to assess the effectiveness of the technique, in terms of immobilization yields, hydrolytic activities, thermal stability and application in kinetic resolution. A good retention of catalytic properties was found for all cases, together with an important thermal and storage stability improvement. Particularly, the CLEA-LCs derived from Candida rugosa lipase showed an outstanding behaviour in terms of thermostability and capability for catalysing the enantioselective hydrolysis of racemic ibuprofen ethyl ester, furnishing the eutomer (S)-ibuprofen with very high conversion and enantioselectivity.
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Affiliation(s)
- Oussama Khiari
- Eco Compatible Asymmetric Catalysis Laboratory (LCAE), Department of Chemistry, Badji Mokhtar University, Annaba 23000, Algeria; (O.K.); (N.B.)
- Department of Chemistry in Pharmaceutical Sciences, Pharmacy Faculty, Complutense University of Madrid (UCM), Ciudad Universitaria, Plaza de Ramon y Cajal, s/n., 28040 Madrid, Spain
| | - Nassima Bouzemi
- Eco Compatible Asymmetric Catalysis Laboratory (LCAE), Department of Chemistry, Badji Mokhtar University, Annaba 23000, Algeria; (O.K.); (N.B.)
| | - José María Sánchez-Montero
- Department of Chemistry in Pharmaceutical Sciences, Pharmacy Faculty, Complutense University of Madrid (UCM), Ciudad Universitaria, Plaza de Ramon y Cajal, s/n., 28040 Madrid, Spain
| | - Andrés R. Alcántara
- Department of Chemistry in Pharmaceutical Sciences, Pharmacy Faculty, Complutense University of Madrid (UCM), Ciudad Universitaria, Plaza de Ramon y Cajal, s/n., 28040 Madrid, Spain
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Conjugation of a zwitterionic polymer with dimethyl chains to lipase significantly increases the enzyme activity and stability. Chin J Chem Eng 2022. [DOI: 10.1016/j.cjche.2021.04.023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Ortega N, Sáez L, Palacios D, Busto MD. Kinetic Modeling, Thermodynamic Approach and Molecular Dynamics Simulation of Thermal Inactivation of Lipases from Burkholderia cepacia and Rhizomucor miehei. Int J Mol Sci 2022; 23:ijms23126828. [PMID: 35743268 PMCID: PMC9224459 DOI: 10.3390/ijms23126828] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2022] [Revised: 06/15/2022] [Accepted: 06/17/2022] [Indexed: 12/04/2022] Open
Abstract
The behavior against temperature and thermal stability of enzymes is a topic of importance for industrial biocatalysis. This study focuses on the kinetics and thermodynamics of the thermal inactivation of Lipase PS from B. cepacia and Palatase from R. miehei. Thermal inactivation was investigated using eight inactivation models at a temperature range of 40–70 °C. Kinetic modeling showed that the first-order model and Weibull distribution were the best equations to describe the residual activity of Lipase PS and Palatase, respectively. The results obtained from the kinetic parameters, decimal reduction time (D and tR), and temperature required (z and z’) indicated a higher thermal stability of Lipase PS compared to Palatase. The activation energy values (Ea) also indicated that higher energy was required to denature bacterial (34.8 kJ mol−1) than fungal (23.3 kJ mol−1) lipase. The thermodynamic inactivation parameters, Gibbs free energy (ΔG#), entropy (ΔS#), and enthalpy (ΔH#) were also determined. The results showed a ΔG# for Palatase (86.0–92.1 kJ mol−1) lower than for Lipase PS (98.6–104.9 kJ mol−1), and a negative entropic and positive enthalpic contribution for both lipases. A comparative molecular dynamics simulation and structural analysis at 40 °C and 70 °C were also performed.
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Immobilization and characterization of latex cysteine peptidases on different supports and application for cow’s milk protein hydrolysis. Process Biochem 2022. [DOI: 10.1016/j.procbio.2022.04.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Experimental and mathematical modeling approaches for biocatalytic post-consumer poly(ethylene terephthalate) hydrolysis. J Biotechnol 2021; 341:76-85. [PMID: 34534594 DOI: 10.1016/j.jbiotec.2021.09.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2021] [Revised: 08/12/2021] [Accepted: 09/12/2021] [Indexed: 11/22/2022]
Abstract
The environmental impact arising from poly(ethylene terephthalate) (PET) waste is notable worldwide. Enzymatic PET hydrolysis can provide chemicals that serve as intermediates for value-added product synthesis and savings in the resources. In the present work, some reaction parameters were evaluated on the hydrolysis of post-consumer PET (PC-PET) using a cutinase from Humicola insolens (HiC). The increase in PC-PET specific area leads to an 8.5-fold increase of the initial enzymatic hydrolysis rate (from 0.2 to 1.7 mmol L-1 h-1), showing that this parameter plays a crucial role in PET hydrolysis reaction. The effect of HiC concentration was investigated, and the enzymatic PC-PET hydrolysis kinetic parameters were estimated based on three different mathematical models describing heterogeneous biocatalysis. The model that best fits the experimental data (R2 = 0.981) indicated 1.68 mgprotein mL-1 as a maximum value of the enzyme concentration to optimize the reaction rate. The HiC thermal stability was evaluated, considering that it is a key parameter for its efficient use in PET degradation. The enzyme half-life was shown to be 110 h at 70 ºC and pH 7.0, which outperforms most of the known enzymes displaying PET hydrolysis activity. The results evidence that HiC is a very promising biocatalyst for efficient PET depolymerization.
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Campisano ISP, de Queiros Eugenio E, de Oliveira Veloso C, Dias ML, de Castro AM, Langone MAP. Solvent-free lipase-catalyzed synthesis of linear and thermally stable polyesters obtained from diacids and diols. BRAZILIAN JOURNAL OF CHEMICAL ENGINEERING 2021. [DOI: 10.1007/s43153-021-00137-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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9
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de Sousa CC, de Resende MM, Falleiros LNSS, Ribeiro EJ. Synthesis and Immobilization of β-galactosidase from Kluyveromyces marxianus Using Ion Exchange Resin. Ind Biotechnol (New Rochelle N Y) 2021. [DOI: 10.1089/ind.2020.0007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- Carla Cristina de Sousa
- Faculty of Chemical Engineering, Uberlândia Federal University, Campus Santa Mônica, Uberlândia-MG, Brazil
| | - Miriam Maria de Resende
- Faculty of Chemical Engineering, Uberlândia Federal University, Campus Santa Mônica, Uberlândia-MG, Brazil
| | | | - Eloízio Júlio Ribeiro
- Faculty of Chemical Engineering, Uberlândia Federal University, Campus Santa Mônica, Uberlândia-MG, Brazil
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Immobilization of Aspergillus oryzae β-galactosidase in cation functionalized agarose matrix and its application in the synthesis of lactulose. Int J Biol Macromol 2020; 167:1564-1574. [PMID: 33217465 DOI: 10.1016/j.ijbiomac.2020.11.110] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Revised: 11/07/2020] [Accepted: 11/13/2020] [Indexed: 01/19/2023]
Abstract
Aspergillus oryzae β-galactosidase was immobilized in in-house quaternary ammonium agarose (QAA) and used for the first time in the synthesis of lactulose. A biocatalyst was obtained with a specific activity of 24,690 IUH∙g-1; protein immobilization yield of 97% and enzyme immobilization yield of 76% were obtained at 30 °C in 10 mM phosphate buffer pH 7 for standard size agarose at 100 mgprotein∙gsupport-1 which the maximum protein load of QAA. Highest yield and specific productivity of lactulose were 0.24 g∙g-1 and 9.78 g∙g-1 h-1 respectively, obtained at pH 6, 100 IUH∙g lactose-1 enzyme/lactose ratio and 12 lactose/fructose molar ratio. In repeated-batch operation with the immobilized enzyme, the cumulative mass of lactulose per unit mass of contacted protein and cumulative specific productivity were higher than obtained with the soluble enzyme since the first batch. After enzyme activity exhaustion, the enzyme was desorbed and QAA support was reused without alteration in its maximum enzyme load capacity and without detriment in yield, productivity and selectivity in the batch synthesis of lactulose with the resulting biocatalyst. This significantly decreases the economic impact of the support, presenting itself as a distinctive advantage of immobilization by ionic interaction.
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11
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Monica P, Kapoor M. Alkali-stable GH11 endo-β-1,4 xylanase (XynB) from Bacillus subtilis strain CAM 21: application in hydrolysis of agro-industrial wastes, fruit/vegetable peels and weeds. Prep Biochem Biotechnol 2020; 51:475-487. [PMID: 33043796 DOI: 10.1080/10826068.2020.1830416] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
GH11 endo-xylanases, due to their inherent structural and biochemical properties, are the key to efficient bioconversion of lignocellulosic biomass into value-added products. A GH11 endo-xylanase (XynB) from Bacillus subtilis strain CAM 21 was cloned, over-expressed and purified (Mw∼24 kDa) using Ni-NTA affinity chromatography. XynB showed optimum activity at pH 7.0 and 50°C and was stable (>88%) in a broad range of pH (4-11). The apparent Km, Kcat and Kcat/Km of XynB were 2.9 mg/ml, 1961.2/sec, and 675.62 ml/mg/sec, respectively using birchwood xylan as substrate. XynB was a classical endo-xylanase as it hydrolyzed birchwood xylan to xylo-oligosaccharides and not xylose. Kinetic stability of XynB at 45-53°C was between 43-182 min. Secondary structure analysis of XynB using far-UV CD spectroscopy revealed presence of 51.85% β strands and 2.64% α helix and was consistent with the homology modeling studies. XynB hydrolyzed the xylan extracted from agro-industrial wastes and fruit/vegetable peels by releasing up to 670 mg/g of reducing sugars. The xylan extracted from weeds (Ageratum conyzoides, Achyranthes aspera and Tridax procumbens) had characteristic signatures of hemicelluloses and after XynB hydrolysis showed cracks, peeling and release of up to 135.2 mg/g reducing sugars.
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Affiliation(s)
- P Monica
- Department of Protein Chemistry and Technology, CSIR-Central Food Technological Research Institute, Mysuru, India.,Academy of Scientific and Innovative Research (AcSIR), CSIR - Human Resource Development Centre (CSIR-HRDC) Campus, Ghaziabad, India
| | - Mukesh Kapoor
- Department of Protein Chemistry and Technology, CSIR-Central Food Technological Research Institute, Mysuru, India.,Academy of Scientific and Innovative Research (AcSIR), CSIR - Human Resource Development Centre (CSIR-HRDC) Campus, Ghaziabad, India
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12
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Kimberle PDS, Carolina MS, Ana ISB, Luciana RBG. Modifying alcalase activity and stability by immobilization onto chitosan aiming at the production of bioactive peptides by hydrolysis of tilapia skin gelatin. Process Biochem 2020. [DOI: 10.1016/j.procbio.2020.06.019] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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13
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Tavernini L, Ottone C, Illanes A, Wilson L. Entrapment of enzyme aggregates in chitosan beads for aroma release in white wines. Int J Biol Macromol 2020; 154:1082-1090. [DOI: 10.1016/j.ijbiomac.2020.03.031] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2019] [Revised: 03/03/2020] [Accepted: 03/05/2020] [Indexed: 02/08/2023]
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Abstract
In this chapter we describe different strategies for enzyme immobilization in biomimetic silica nanoparticles. Synthesis of this type of support is performed under mild and biocompatible conditions and has been proven suitable for the immobilization and stabilization of a range of enzymes and enzymatic systems in nanostructured particles. Immobilization occurs by entrapment while the silica matrix is formed via catalysis of a polyamine molecule and the presence of silicic acid. Parameters such as enzyme, polyamine molecule, or source of Si concentration have been tailored in order to maximize enzymatic loads, stabilities, and specific activities of the catalysts. We provide different approaches for the immobilization and co-immobilization of enzymes that could be potentially extensible to other biocatalysts.
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Affiliation(s)
- Erienne Jackson
- Laboratorio de Biotecnología, Facultad de Ingeniería, Universidad ORT Uruguay, Montevideo, Uruguay
| | - Sonali Correa
- Laboratorio de Biotecnología, Facultad de Ingeniería, Universidad ORT Uruguay, Montevideo, Uruguay
| | - Lorena Betancor
- Laboratorio de Biotecnología, Facultad de Ingeniería, Universidad ORT Uruguay, Montevideo, Uruguay.
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15
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Illanes A, Wilson L. Parameters for the Evaluation of Immobilized Enzymes Under Process Conditions. Methods Mol Biol 2020; 2100:65-81. [PMID: 31939115 DOI: 10.1007/978-1-0716-0215-7_3] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The characterization of immobilized enzymes allows the evaluation of the immobilization process itself and also the projection of the immobilized enzyme performance under process operation conditions. Based on such characterization, strategies for support functionalization and enzyme immobilization into the activated support can be selected, determining the best conditions for conducting such steps in view of the intended use of the biocatalyst, establishing a linkage between biocatalyst production and biocatalyst use. The determination of the catalytic potential of the immobilized enzyme under operational conditions is a priceless parameter that takes into account both activity and stability, including the effect of both mass transfer limitations (diffusional restrictions) and intrinsic enzyme inactivation upon the immobilization process.
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Affiliation(s)
- Andrés Illanes
- School of Biochemical Engineering, Pontificia Universidad Católica de Valparaíso, Valparaíso, Chile
| | - Lorena Wilson
- School of Biochemical Engineering, Pontificia Universidad Católica de Valparaíso, Valparaíso, Chile.
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16
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Rios NS, Morais EG, dos Santos Galvão W, Andrade Neto DM, dos Santos JCS, Bohn F, Correa MA, Fechine PBA, Fernandez-Lafuente R, Gonçalves LRB. Further stabilization of lipase from Pseudomonas fluorescens immobilized on octyl coated nanoparticles via chemical modification with bifunctional agents. Int J Biol Macromol 2019; 141:313-324. [DOI: 10.1016/j.ijbiomac.2019.09.003] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2019] [Revised: 08/26/2019] [Accepted: 09/02/2019] [Indexed: 12/27/2022]
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Considerations when Measuring Biocatalyst Performance. Molecules 2019; 24:molecules24193573. [PMID: 31623317 PMCID: PMC6804192 DOI: 10.3390/molecules24193573] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Revised: 09/27/2019] [Accepted: 09/29/2019] [Indexed: 01/02/2023] Open
Abstract
As biocatalysis matures, it becomes increasingly important to establish methods with which to measure biocatalyst performance. Such measurements are important to assess immobilization strategies, different operating modes, and reactor configurations, aside from comparing protein engineered variants and benchmarking against economic targets. While conventional measurement techniques focus on a single performance metric (such as the total turnover number), here, it is argued that three metrics (achievable product concentration, productivity, and enzyme stability) are required for an accurate assessment of scalability.
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Comparison of the immobilization of lipase from Pseudomonas fluorescens on divinylsulfone or p-benzoquinone activated support. Int J Biol Macromol 2019; 134:936-945. [DOI: 10.1016/j.ijbiomac.2019.05.106] [Citation(s) in RCA: 71] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Revised: 05/14/2019] [Accepted: 05/18/2019] [Indexed: 12/14/2022]
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19
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Ospina V, Bernal C, Mesa M. Thermal Hyperactivation and Stabilization of β-Galactosidase from Bacillus circulans through a Silica Sol–Gel Process Mediated by Chitosan–Metal Chelates. ACS APPLIED BIO MATERIALS 2019; 2:3380-3392. [DOI: 10.1021/acsabm.9b00371] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Viviana Ospina
- Grupo Ciencia de los Materiales, Instituto de Química, Facultad de Ciencias Exactas y Naturales, Universidad de Antioquia, UdeA, Calle 70 no. 52-21, Medellín 1226, Colombia
| | - Claudia Bernal
- Instituto de Investigación Multidisciplinario en Ciencia y Tecnología, Tecnología Enzimática para Bioprocesos, Departamento de Ingeniería de Alimentos, Universidad de La Serena, Raul Bitran, La Serena 1305,Chile
| | - Monica Mesa
- Grupo Ciencia de los Materiales, Instituto de Química, Facultad de Ciencias Exactas y Naturales, Universidad de Antioquia, UdeA, Calle 70 no. 52-21, Medellín 1226, Colombia
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Pinheiro BB, Rios NS, Rodríguez Aguado E, Fernandez-Lafuente R, Freire TM, Fechine PB, dos Santos JC, Gonçalves LR. Chitosan activated with divinyl sulfone: a new heterofunctional support for enzyme immobilization. Application in the immobilization of lipase B from Candida antarctica. Int J Biol Macromol 2019; 130:798-809. [DOI: 10.1016/j.ijbiomac.2019.02.145] [Citation(s) in RCA: 72] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Revised: 02/19/2019] [Accepted: 02/24/2019] [Indexed: 10/27/2022]
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21
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Sun L, Huang D, Zhu L, Zhang B, Peng C, Ma T, Deng X, Wu J, Wang W. Novel thermostable enzymes from Geobacillus thermoglucosidasius W-2 for high-efficient nitroalkane removal under aerobic and anaerobic conditions. BIORESOURCE TECHNOLOGY 2019; 278:73-81. [PMID: 30682639 DOI: 10.1016/j.biortech.2019.01.045] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Revised: 01/08/2019] [Accepted: 01/09/2019] [Indexed: 06/09/2023]
Abstract
In this study, a thermophilic facultative anaerobic strain Geobacillus thermoglucosidasius W-2 was found to degrade nitroalkane under both aerobic and anaerobic conditions. Bioinformatical analysis revealed three putative nitroalkane-oxidizing enzymes (Gt-NOEs) genes from the W-2 genome. The three identified proteins Gt2929, Gt1378, and Gt1208 displayed optimal activities at high temperatures (70, 70, and 80 °C, respectively). Among these, Gt2929 exhibited excellent degradation capability, pH stability, and metal ion tolerance for nitronates under aerobic condition. Interestingly, under anaerobic condition, only Gt1378 still maintained high activity for 2-nitropropane and nitroethane, indicating that the W-2 strain utilized various pathways to degrade nitronates under aerobic and anaerobic conditions, respectively. Taken together, the first revelation of thermophilic nitroalkane-degrading mechanism under both aerobic and anaerobic conditions provides guidance and platform for biotechnological and industrial applications.
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Affiliation(s)
- Linbo Sun
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Di Huang
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Lin Zhu
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Bingling Zhang
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Chenchen Peng
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Ting Ma
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life Sciences, Nankai University, Tianjin 300071, PR China
| | - Xin Deng
- Department of Biomedical Sciences, City University of Hong Kong, Kowloon Tong, Hong Kong
| | - Junli Wu
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China
| | - Wei Wang
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, TEDA, Tianjin 300457, PR China; Tianjin Key Laboratory of Microbial Functional Genomics, Tianjin 300457, PR China.
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Correa S, Puertas S, Gutiérrez L, Asín L, Martínez de la Fuente J, Grazú V, Betancor L. Design of stable magnetic hybrid nanoparticles of Si-entrapped HRP. PLoS One 2019; 14:e0214004. [PMID: 30933987 PMCID: PMC6443235 DOI: 10.1371/journal.pone.0214004] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2018] [Accepted: 03/05/2019] [Indexed: 12/17/2022] Open
Abstract
Hybrid and composite nanoparticles represent an attractive material for enzyme integration due to possible synergic advantages of the structural builders in the properties of the nanobiocatalyst. In this study, we report the synthesis of a new stable hybrid nanobiocatalyst formed by biomimetic silica (Si) nanoparticles entrapping both Horseradish Peroxidase (HRP) (EC 1.11.1.7) and magnetic nanoparticles (MNPs). We have demonstrated that tailoring of the synthetic reagents and post immobilization treatments greatly impacted physical and biocatalytic properties such as an unprecedented ~280 times increase in the half-life time in thermal stability experiments. The optimized nanohybrid biocatalyst that showed superparamagnetic behaviour, was effective in the batch conversion of indole-3-acetic acid, a prodrug used in Direct Enzyme Prodrug Therapy (DEPT). Our system, that was not cytotoxic per se, showed enhanced cytotoxic activity in the presence of the prodrug towards HCT-116, a colorectal cancer cell line. The strategy developed proved to be effective in obtaining a stabilized nanobiocatalyst combining three different organic/inorganic materials with potential in DEPT and other biotechnological applications.
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Affiliation(s)
- Sonali Correa
- Laboratorio de Biotecnología, Universidad ORT Uruguay, Montevideo, Uruguay
| | | | - Lucía Gutiérrez
- Instituto de Nanociencia de Aragón, Universidad de Zaragoza, Campus Río Ebro, Edificio I+D, Zaragoza, Spain
- Instituto de Ciencia de Materiales de Aragón (ICMA), Consejo Superior de Investigaciones Científica, Zaragoza, Spain
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), Madrid, Spain
| | - Laura Asín
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), Madrid, Spain
| | - Jesús Martínez de la Fuente
- Instituto de Ciencia de Materiales de Aragón (ICMA), Consejo Superior de Investigaciones Científica, Zaragoza, Spain
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), Madrid, Spain
| | - Valeria Grazú
- Instituto de Ciencia de Materiales de Aragón (ICMA), Consejo Superior de Investigaciones Científica, Zaragoza, Spain
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), Madrid, Spain
| | - Lorena Betancor
- Laboratorio de Biotecnología, Universidad ORT Uruguay, Montevideo, Uruguay
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Jeon MS, Park KM, Yu H, Park JY, Chang PS. Effect of intense pulsed light on the deactivation of lipase: Enzyme-deactivation kinetics and tertiary structural changes by fragmentation. Enzyme Microb Technol 2019; 124:63-69. [PMID: 30797480 DOI: 10.1016/j.enzmictec.2019.02.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2017] [Revised: 11/20/2018] [Accepted: 02/01/2019] [Indexed: 11/19/2022]
Abstract
The effect of intense pulsed light (IPL) irradiation on Chromobacterium viscosum lipase was investigated with a primary focus on catalytic activity and molecular structure. During IPL irradiation, lipase activity decreased significantly with increasing pulse fluence (Fp) and exposure time (te). IPL-induced deactivation kinetics were further elucidated based on a two-step series-type deactivation model (constant deactivation rate k1 >k2). Fp was found to be the dominant variable affecting the degree of lipase deactivation, and residual activity was not associated with increasing te below a certain Fp energy density (2.66 mJ/cm2), implying a critical threshold for IPL-induced deactivation of lipase. From the results of fluorescence spectroscopy and sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), we determined that IPL-induced deactivation was caused by fragmentation, leading to lipase tertiary structural changes. Furthermore, the results of FindPept analysis and matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) indicated that the internal sensitive bonds of lipase were cleaved preferentially by IPL, such that IPL irradiation induced site-sensitive fragmentation and peptide bond cleavage.
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Affiliation(s)
- Min-Sik Jeon
- Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Republic of Korea
| | - Kyung-Min Park
- Department of Food Science and Biotechnology, Wonkwang University, Iksan, 54538, Republic of Korea
| | - Hyunjong Yu
- Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Republic of Korea
| | - Jun-Young Park
- Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Republic of Korea
| | - Pahn-Shick Chang
- Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Republic of Korea; Center for Food and Bioconvergence, Seoul National University, Seoul, 08826, Republic of Korea; Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
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24
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Mutra R, Joseph JE, Panwar D, Kaira GS, Kapoor M. Low molecular weight α-galactosidase from black gram (Vigna mungo): Purification and insights towards biochemical and biophysical properties. Int J Biol Macromol 2018; 119:770-778. [DOI: 10.1016/j.ijbiomac.2018.06.093] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2017] [Revised: 06/18/2018] [Accepted: 06/20/2018] [Indexed: 11/26/2022]
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25
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26
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Synthesis and assembly of human vault particles in yeast. Biotechnol Bioeng 2018; 115:2941-2950. [DOI: 10.1002/bit.26825] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2018] [Revised: 08/04/2018] [Accepted: 08/30/2018] [Indexed: 01/04/2023]
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27
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Nordblad M, Gomes MD, Meissner MP, Ramesh H, Woodley JM. Scoping Biocatalyst Performance Using Reaction Trajectory Analysis. Org Process Res Dev 2018. [DOI: 10.1021/acs.oprd.8b00119] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Mathias Nordblad
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Building 229, Søltofts Plads, DK-2800 Kgs. Lyngby, Denmark
| | - Mafalda Dias Gomes
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Building 229, Søltofts Plads, DK-2800 Kgs. Lyngby, Denmark
| | - Murray P. Meissner
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Building 229, Søltofts Plads, DK-2800 Kgs. Lyngby, Denmark
| | - Hemalata Ramesh
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Building 229, Søltofts Plads, DK-2800 Kgs. Lyngby, Denmark
| | - John M. Woodley
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Building 229, Søltofts Plads, DK-2800 Kgs. Lyngby, Denmark
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28
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Homotopy perturbation method for kinetic analysis of thermal inactivation of jack bean urease. KARBALA INTERNATIONAL JOURNAL OF MODERN SCIENCE 2018. [DOI: 10.1016/j.kijoms.2017.10.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
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29
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Li M, Guo S, Li X, Wang Q, Zhu L, Yin C, Wang W. Engineering a highly thermostable and stress tolerant superoxide dismutase by N-terminal modification and metal incorporation. BIOTECHNOL BIOPROC E 2018. [DOI: 10.1007/s12257-017-0243-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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30
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Escobar S, Bernal C, Bolivar JM, Nidetzky B, López-Gallego F, Mesa M. Understanding the silica-based sol-gel encapsulation mechanism of Thermomyces lanuginosus lipase: The role of polyethylenimine. MOLECULAR CATALYSIS 2018. [DOI: 10.1016/j.mcat.2018.02.024] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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31
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Pinheiro MP, Rios NS, Fonseca TDS, Bezerra FDA, Rodríguez-Castellón E, Fernandez-Lafuente R, Carlos de Mattos M, dos Santos JCS, Gonçalves LRB. Kinetic resolution of drug intermediates catalyzed by lipase B fromCandida antarcticaimmobilized on immobead-350. Biotechnol Prog 2018. [DOI: 10.1002/btpr.2630] [Citation(s) in RCA: 94] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Maísa Pessoa Pinheiro
- Dept. de Engenharia Química; Universidade Federal do Ceará, CEP 60455-760; Fortaleza CE Brazil
| | - Nathalia Saraiva Rios
- Dept. de Engenharia Química; Universidade Federal do Ceará, CEP 60455-760; Fortaleza CE Brazil
| | - Thiago de S. Fonseca
- Dept. de Química Orgânica e Inorgânica, Laboratório de Biotecnologia e Síntese Orgânica (LABS); Universidade Federal do Ceará, Campus do Pici; Fortaleza CE 60455-970 Brazil
| | - Francisco de Aquino Bezerra
- Dept. de Química Orgânica e Inorgânica, Laboratório de Biotecnologia e Síntese Orgânica (LABS); Universidade Federal do Ceará, Campus do Pici; Fortaleza CE 60455-970 Brazil
| | - Enrique Rodríguez-Castellón
- Dept. de Química Inorgánica, Facultad de Ciencias; Universidad de Málaga, Campus de Teatinos, Boulevard Louis Pasteur; Málaga 29010 Spain
| | | | - Marcos Carlos de Mattos
- Dept. de Química Orgânica e Inorgânica, Laboratório de Biotecnologia e Síntese Orgânica (LABS); Universidade Federal do Ceará, Campus do Pici; Fortaleza CE 60455-970 Brazil
| | - José C. S. dos Santos
- Departament of Chemical Engineering; Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira, CEP 62785-000; Acarape CE Brazil
| | - Luciana R. B. Gonçalves
- Dept. de Engenharia Química; Universidade Federal do Ceará, Campus do Pici, CEP 60455-760; Fortaleza CE Brazil
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Cabral BV, Santos LD, Santana Falleiros LNS, Carmo TS, Freitas FF, Cardoso SL, Resende MM, Ribeiro EJ. Sucrose hydrolysis by invertase immobilized on Duolite A-568 employing a packed-bed reactor. CHEM ENG COMMUN 2017. [DOI: 10.1080/00986445.2017.1336089] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Bruna Vieira Cabral
- Chemical Engineering Faculty, Federal University of Uberlândia, Uberlândia, Brazil
| | | | | | - Taciana S. Carmo
- Chemical Engineering Faculty, Federal University of Uberlândia, Uberlândia, Brazil
| | | | - Saulo Luiz Cardoso
- Department of Chemical Systems Engineering, University of Campinas, Campinas, Brazil
| | - Miriam M. Resende
- Chemical Engineering Faculty, Federal University of Uberlândia, Uberlândia, Brazil
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Escobar S, Velasco-Lozano S, Lu CH, Lin YF, Mesa M, Bernal C, López-Gallego F. Understanding the functional properties of bio-inorganic nanoflowers as biocatalysts by deciphering the metal-binding sites of enzymes. J Mater Chem B 2017; 5:4478-4486. [PMID: 32263975 DOI: 10.1039/c6tb03295h] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The biomineralisation of metal phosphates is a promising approach to develop more efficient nanobiocatalysts; however, the interactions between the protein and the inorganic mineral are poorly understood. Elucidating which protein regions most likely participate in the mineral formation will guide the fabrication of more efficient biocatalysts based on metal-phosphate nanoflowers. We have biomineralised the lipase from Thermomyces lanuginosus using three calcium, zinc and copper phosphates to fabricate different types of bio-inorganic nanoflowers. To better understand how the biomineralisation process affects the enzyme properties, we have computationally predicted the protein regions with a higher propensity for binding Ca2+, Cu2+ and Zn2+. These binding sites can be considered as presumable nucleation points where the biomineralisation process starts and explain why different metals can form bio-inorganic nanoflowers of the same enzyme with different functional properties. The formation of calcium, copper and zinc phosphates in the presence of this lipase gives rise to nanoflowers with different morphologies and different enzymatic properties such as activity, stability, hyperactivation and activity-pH profile; these functional differences are supported by structural studies based on fluorescence spectroscopy and can be explained by the different locations of the predicted nucleation sites for the different metals. Among the three metals used herein, the mineralisation of this lipase with zinc-phosphate enables the fabrication of bio-inorganic nanoflowers 34 times more stable than the soluble enzyme. These bio-inorganic nanoflowers were reused for 8 reaction cycles achieving 100% yield in the hydrolysis of p-nitrophenol butyrate but losing more than 50% of their initial activity after 6 operational cycles. Finally, this heterogeneous biocatalyst was more active and enantioselective than the soluble enzyme (ee = 79%(R)) towards the kinetic resolution of rac-1-phenylethyl acetate yielding the R enantiomer with ee = 84%.
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Affiliation(s)
- Sindy Escobar
- Grupo Ciencia de los Materiales, Instituto de Química, Facultad de Ciencias Exactas y Naturales, Universidad de Antioquia - UdeA, Calle 70 No. 52-21, Medellín, Colombia
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34
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Brochier B, Mercali GD, Marczak LDF. Influence of moderate electric field on inactivation kinetics of peroxidase and polyphenol oxidase and on phenolic compounds of sugarcane juice treated by ohmic heating. Lebensm Wiss Technol 2016. [DOI: 10.1016/j.lwt.2016.08.001] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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35
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Ahumada K, Martínez-Gil A, Moreno-Simunovic Y, Illanes A, Wilson L. Aroma Release in Wine Using Co-Immobilized Enzyme Aggregates. Molecules 2016; 21:molecules21111485. [PMID: 27834828 PMCID: PMC6273695 DOI: 10.3390/molecules21111485] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2016] [Revised: 10/18/2016] [Accepted: 10/19/2016] [Indexed: 11/16/2022] Open
Abstract
Aroma is a remarkable factor of quality and consumer preference in wine, representing a distinctive feature of the product. Most aromatic compounds in varietals are in the form of glycosidic precursors, which are constituted by a volatile aglycone moiety linked to a glucose residue by an O-glycosidic bond; glucose is often linked to another sugar (arabinose, rhamnose or apiose). The use of soluble β-glycosidases for aroma liberation implies the addition of a precipitating agent to remove it from the product and precludes its reuse after one batch. An attractive option from a technological perspective that will aid in removing such constraints is the use of immobilized glycosidases. Immobilization by aggregation and crosslinking is a simple strategy producing enzyme catalysts of very high specific activity, being an attractive option to conventional immobilization to solid inert supports. The purpose of this work was the evaluation of co-immobilized β-glycosidases crosslinked aggregates produced from the commercial preparation AR2000, which contains the enzymes involved in the release of aromatic terpenes in Muscat wine (α-l-arabinofuranosidase and β-d-glucopyranosidase). To do so, experiments were conducted with co-immobilized crosslinked enzyme aggregates (combi-CLEAs), and with the soluble enzymes, using an experiment without enzyme addition as control. Stability of the enzymes at the conditions of winemaking was assessed and the volatiles composition of wine was determined by SPE-GC-MS. Stability of enzymes in combi-CLEAs was much higher than in soluble form, 80% of the initial activity remaining after 60 days in contact with the wine; at the same conditions, the soluble enzymes had lost 80% of their initial activities after 20 days. Such higher stabilities will allow prolonged use of the enzyme catalyst reducing its impact in the cost of winemaking. Wine treated with combi-CLEAs was the one exhibiting the highest concentration of total terpenes (18% higher than the control) and the highest concentrations of linalool (20% higher), nerol (20% higher) and geraniol (100% higher), which are the most important terpenes in determining Muscat typicity. Co-immobilized enzymes were highly stable at winemaking conditions, so their reutilization is possible and technologically attractive by reducing the impact of enzyme cost on winemaking cost.
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Affiliation(s)
- Katherine Ahumada
- School of Biochemical Engineering, Pontificia Universidad Católica de Valparaíso, Valparaíso 2362803, Chile.
| | - Ana Martínez-Gil
- Technological Center for Grapevine and Wine, Faculty of Agricultural Sciences, Universidad de Talca, Talca 824000, Chile.
| | - Yerko Moreno-Simunovic
- Technological Center for Grapevine and Wine, Faculty of Agricultural Sciences, Universidad de Talca, Talca 824000, Chile.
| | - Andrés Illanes
- School of Biochemical Engineering, Pontificia Universidad Católica de Valparaíso, Valparaíso 2362803, Chile.
| | - Lorena Wilson
- School of Biochemical Engineering, Pontificia Universidad Católica de Valparaíso, Valparaíso 2362803, Chile.
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Rios NS, Pinheiro MP, dos Santos JCS, de S. Fonseca T, Lima LD, de Mattos MC, Freire DM, da Silva IJ, Rodríguez-Aguado E, Gonçalves LR. Strategies of covalent immobilization of a recombinant Candida antarctica lipase B on pore-expanded SBA-15 and its application in the kinetic resolution of ( R , S )-Phenylethyl acetate. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.molcatb.2016.08.009] [Citation(s) in RCA: 61] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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37
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Nunes MA, Gois PM, Rosa ME, Martins S, Fernandes PC, Ribeiro MH. Boronic acids as efficient cross linkers for PVA: synthesis and application of tunable hollow microspheres in biocatalysis. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.02.017] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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38
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Jackson E, López-Gallego F, Guisan J, Betancor L. Enhanced stability of l -lactate dehydrogenase through immobilization engineering. Process Biochem 2016. [DOI: 10.1016/j.procbio.2016.06.001] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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39
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Lemos MA, Oliveira JC, Saraiva JA. Effect of Water Content on the Thermal Inactivation Kinetics of Horseradish Peroxidase Freeze-Dried from Alkaline pH. FOOD SCI TECHNOL INT 2016. [DOI: 10.1106/e9nw-1tb4-ku4w-8x7m] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Abstract
The thermal inactivation of horseradish peroxidase freeze-dried from solutions of different pH (8, 10 and 11.5, measured at 25 C) and equilibrated to different water contents was studied in the temperature range from 110 to 150 C. The water contents studied (0.0, 1.4, 16.2 and 25.6 g water per 100 g of dry enzyme) corresponded to water activities of 0.0, 0.11, 0.76 and 0.88 at 4 C. The kinetics were well described by a double exponential model. The enzyme was generally more stable the lower the pH of the original solution, and for all pH values, the maximum stability was obtained at 1.4 g water/100 g dry enzyme. Values of z were generally independent of water content and of the pH of the original solution, and in the range of 15–25 °C, usually found in neutral conditions, with the exception of the enzyme freeze dried from pH 11.5 and equilibrated with phosphorus pentoxide, where a z-value of the stable fraction close to 10 C was found.
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Affiliation(s)
- M. A. Lemos
- Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Dr. António Bernardino de Almeida, 4200 Porto, Portugal
| | - J. C. Oliveira
- Department of Food Science and Technology, University College Cork, Cork, Ireland
| | - J. A. Saraiva
- Department of Chemistry, University of Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal
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40
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Escobar S, Illanes A, Wilson L, Bernal C, Mesa M. In situ immobilization of β‐galactosidase from
Bacillus circulans
in silica by sol‐gel process: Application in prebiotic synthesis. Eng Life Sci 2016. [DOI: 10.1002/elsc.201500097] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Affiliation(s)
- Sindy Escobar
- Grupo Ciencia de los Materiales Instituto de Química FCEN Universidad de Antioquia UdeA Medellín Colombia
| | - Andres Illanes
- School of Biochemical Engineering Pontificia Universidad Católica de Valparaíso Valparaíso Chile
| | - Lorena Wilson
- School of Biochemical Engineering Pontificia Universidad Católica de Valparaíso Valparaíso Chile
| | - Claudia Bernal
- School of Biochemical Engineering Pontificia Universidad Católica de Valparaíso Valparaíso Chile
| | - Monica Mesa
- Grupo Ciencia de los Materiales Instituto de Química FCEN Universidad de Antioquia UdeA Medellín Colombia
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Li M, Zhu L, Wang W. Improving the thermostability and stress tolerance of an archaeon hyperthermophilic superoxide dismutase by fusion with a unique N-terminal domain. SPRINGERPLUS 2016; 5:241. [PMID: 27026935 PMCID: PMC4771647 DOI: 10.1186/s40064-016-1854-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/27/2015] [Accepted: 02/15/2016] [Indexed: 11/10/2022]
Abstract
The superoxide dismutase from the archaeon Sulfolobus solfataricus (SOD Ss ) is a well-studied hyperthermophilic SOD with crystal structure and possible thermostability factors characterized. Previously, we discovered an N-terminal domain (NTD) in a thermophilic SOD from Geobacillus thermodenitrificans NG80-2 which confers heat resistance on homologous mesophilic SODs. The present study therefore aimed to further improve the thermostability and stress tolerance of SOD Ss via fusion with this NTD. The recombinant protein, rSOD Ss , exhibited improved thermophilicity, higher working temperature, improved thermostability, broader pH stability, and enhanced tolerance to inhibitors and organic media than SOD Ss without any alterations in its oligomerization state. These results suggest that the NTD is an excellent candidate for improving stability of both mesophilic and thermophilic SOD from either bacteria or archaea via simple genetic manipulation. Therefore, this study provides a general, feasible and highly useful strategy for generating extremely thermostable SODs for industrial applications.
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Affiliation(s)
- Mingchang Li
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, 23 Hongda Street, TEDA, Tianjin, 300457 People's Republic of China
| | - Lin Zhu
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, 23 Hongda Street, TEDA, Tianjin, 300457 People's Republic of China
| | - Wei Wang
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, TEDA Institute of Biological Sciences and Biotechnology, Nankai University, 23 Hongda Street, TEDA, Tianjin, 300457 People's Republic of China ; Tianjin Key Laboratory of Microbial Functional Genomics, TEDA, Tianjin, 300457 People's Republic of China
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42
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Wang M, Abad D, Kickhoefer VA, Rome LH, Mahendra S. Vault Nanoparticles Packaged with Enzymes as an Efficient Pollutant Biodegradation Technology. ACS NANO 2015; 9:10931-10940. [PMID: 26493711 DOI: 10.1021/acsnano.5b04073] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Vault nanoparticles packaged with enzymes were synthesized as agents for efficiently degrading environmental contaminants. Enzymatic biodegradation is an attractive technology for in situ cleanup of contaminated environments because enzyme-catalyzed reactions are not constrained by nutrient requirements for microbial growth and often have higher biodegradation rates. However, the limited stability of extracellular enzymes remains a major challenge for practical applications. Encapsulation is a recognized method to enhance enzymatic stability, but it can increase substrate diffusion resistance, lower catalytic rates, and increase the apparent half-saturation constants. Here, we report an effective approach for boosting enzymatic stability by single-step packaging into vault nanoparticles. With hollow core structures, assembled vault nanoparticles can simultaneously contain multiple enzymes. Manganese peroxidase (MnP), which is widely used in biodegradation of organic contaminants, was chosen as a model enzyme in the present study. MnP was incorporated into vaults via fusion to a packaging domain called INT, which strongly interacts with vaults' interior surface. MnP fused to INT and vaults packaged with the MnP-INT fusion protein maintained peroxidase activity. Furthermore, MnP-INT packaged in vaults displayed stability significantly higher than that of free MnP-INT, with slightly increased Km value. Additionally, vault-packaged MnP-INT exhibited 3 times higher phenol biodegradation in 24 h than did unpackaged MnP-INT. These results indicate that the packaging of MnP enzymes in vault nanoparticles extends their stability without compromising catalytic activity. This research will serve as the foundation for the development of efficient and sustainable vault-based bioremediation approaches for removing multiple contaminants from drinking water and groundwater.
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Affiliation(s)
- Meng Wang
- Department of Civil and Environmental Engineering, ‡Department of Biological Chemistry, and §California NanoSystems Institute, University of California , Los Angeles, California 90095, United States
| | - Danny Abad
- Department of Civil and Environmental Engineering, ‡Department of Biological Chemistry, and §California NanoSystems Institute, University of California , Los Angeles, California 90095, United States
| | - Valerie A Kickhoefer
- Department of Civil and Environmental Engineering, ‡Department of Biological Chemistry, and §California NanoSystems Institute, University of California , Los Angeles, California 90095, United States
| | - Leonard H Rome
- Department of Civil and Environmental Engineering, ‡Department of Biological Chemistry, and §California NanoSystems Institute, University of California , Los Angeles, California 90095, United States
| | - Shaily Mahendra
- Department of Civil and Environmental Engineering, ‡Department of Biological Chemistry, and §California NanoSystems Institute, University of California , Los Angeles, California 90095, United States
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Martínez V, de Santos PG, García-Hidalgo J, Hormigo D, Prieto MA, Arroyo M, de la Mata I. Novel extracellular medium-chain-length polyhydroxyalkanoate depolymerase from Streptomyces exfoliatus K10 DSMZ 41693: a promising biocatalyst for the efficient degradation of natural and functionalized mcl-PHAs. Appl Microbiol Biotechnol 2015; 99:9605-15. [PMID: 26156240 DOI: 10.1007/s00253-015-6780-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2015] [Revised: 06/15/2015] [Accepted: 06/17/2015] [Indexed: 11/30/2022]
Abstract
Cloning and biochemical characterization of a novel extracellular medium-chain-length polyhydroxyalkanoate (mcl-PHA) depolymerase from Streptomyces exfoliatus K10 DSMZ 41693 are described. The primary structure of the depolymerase (PhaZSex2) includes the lipase consensus sequence (serine-histidine-aspartic acid) which is known for serine hydrolases. Secondary structure analysis shows 7.9 % α-helix, 43.9 % β-sheet, 19.4 % β-turns, and 31.2 % random coil, suggesting that this enzyme belongs to the α/β hydrolase fold family, in agreement with other PHA depolymerases and lipases. The enzyme was efficiently produced as an extracellular active form in Rhodococcus and purified by two consecutive hydrophobic chromatographic steps. Matrix-assisted laser desorption-time-of-flight (MALDI-TOF) analysis of the purified enzyme revealed a monomer of 27.6 kDa with a midpoint transition temperature of 44.2 °C. Remarkably, the activity is significantly enhanced by low concentrations of nonionic and anionic detergents and thermal stability is improved by the presence of 10 % glycerol. PhaZSex2 is an endo-exohydrolase that cleaves both large and small PHA molecules, producing (R)-3-hydroxyoctanoic acid monomers as the main reaction product. Markedly, PhaZSex2 is able to degrade functionalized polymers containing thioester groups in the side chain (PHACOS), releasing functional thioester-based monomers and oligomers demonstrating the potentiality of this novel biocatalyst for the industrial production of enantiopure (R)-3-hydroxyalkanoic acids.
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Affiliation(s)
- Virginia Martínez
- Department of Biochemistry and Molecular Biology, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.,Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Hørsholm, Denmark
| | - Patricia Gómez de Santos
- Department of Biochemistry and Molecular Biology, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.,Department of Biocatalysis, Institute of Catalysis, CSIC, Madrid, Spain
| | - Javier García-Hidalgo
- Department of Biochemistry and Molecular Biology, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain
| | - Daniel Hormigo
- Department of Biochemistry and Molecular Biology, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.,Department of Pharmacy and Biotechnology, Biomedical Sciences Faculty, European University of Madrid, Madrid, Spain
| | - M Auxiliadora Prieto
- Department of Environmental Biology, Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas, Madrid, Spain
| | - Miguel Arroyo
- Department of Biochemistry and Molecular Biology, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain
| | - Isabel de la Mata
- Department of Biochemistry and Molecular Biology, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.
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Hong SC, Park KM, Son YH, Jung HS, Kim K, Choi SJ, Chang PS. AOT/isooctane reverse micelles with a microaqueous core act as protective shells for enhancing the thermal stability of Chromobacterium viscosum lipase. Food Chem 2015; 179:263-9. [DOI: 10.1016/j.foodchem.2015.01.120] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2014] [Revised: 01/06/2015] [Accepted: 01/27/2015] [Indexed: 11/17/2022]
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Tavares APM, Silva CG, Dražić G, Silva AMT, Loureiro JM, Faria JL. Laccase immobilization over multi-walled carbon nanotubes: Kinetic, thermodynamic and stability studies. J Colloid Interface Sci 2015; 454:52-60. [PMID: 26002339 DOI: 10.1016/j.jcis.2015.04.054] [Citation(s) in RCA: 119] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2015] [Revised: 04/12/2015] [Accepted: 04/25/2015] [Indexed: 01/20/2023]
Abstract
The biocatalytic performance of immobilized enzyme systems depends mostly on the intrinsic properties of both biomolecule and support, immobilization technique and immobilization conditions. Multi-walled carbon nanotubes (MWCNTs) possess unique features for enzyme immobilization by adsorption. Enhanced catalytic activity and stability can be achieved by optimization of the immobilization conditions and by investigating the effect of operational parameters. Laccase was immobilized over MWCNTs by adsorption. The hybrid material was characterized by Fourier transformed infrared (FTIR) spectroscopy, scanning and transmission electron microscopy (SEM and TEM, respectively). The effect of different operational conditions (contact time, enzyme concentration and pH) on laccase immobilization was investigated. Optimized conditions were used for thermal stability, kinetic, and storage and operational stability studies. The optimal immobilization conditions for a laccase concentration of 3.75μL/mL were a pH of 9.0 and a contact time of 30min (522 Ulac/gcarrier). A decrease in the thermal stability of laccase was observed after immobilization. Changes in ΔS and ΔH of deactivation were found for the immobilized enzyme. The Michaelis-Menten kinetic constant was higher for laccase/MWCNT system than for free laccase. Immobilized laccase maintained (or even increased) its catalytic performance up to nine cycles of utilization and revealed long-term storage stability.
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Affiliation(s)
- Ana P M Tavares
- LCM - Laboratory of Catalysis and Materials, LSRE - Laboratory of Separation and Reaction Engineering, Associate Laboratory LSRE-LCM, Faculdade de Engenharia, Universidade do Porto, Rua Dr. Roberto Frias s/n, 4200-465 Porto, Portugal.
| | - Cláudia G Silva
- LCM - Laboratory of Catalysis and Materials, LSRE - Laboratory of Separation and Reaction Engineering, Associate Laboratory LSRE-LCM, Faculdade de Engenharia, Universidade do Porto, Rua Dr. Roberto Frias s/n, 4200-465 Porto, Portugal
| | - Goran Dražić
- Department of Nanostructured Materials, Jožef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia; Laboratory for Materials Chemistry, National Institute of Chemistry, Hajdrihova 19, SI-1000 Ljubljana, Slovenia
| | - Adrián M T Silva
- LCM - Laboratory of Catalysis and Materials, LSRE - Laboratory of Separation and Reaction Engineering, Associate Laboratory LSRE-LCM, Faculdade de Engenharia, Universidade do Porto, Rua Dr. Roberto Frias s/n, 4200-465 Porto, Portugal
| | - José M Loureiro
- LCM - Laboratory of Catalysis and Materials, LSRE - Laboratory of Separation and Reaction Engineering, Associate Laboratory LSRE-LCM, Faculdade de Engenharia, Universidade do Porto, Rua Dr. Roberto Frias s/n, 4200-465 Porto, Portugal
| | - Joaquim L Faria
- LCM - Laboratory of Catalysis and Materials, LSRE - Laboratory of Separation and Reaction Engineering, Associate Laboratory LSRE-LCM, Faculdade de Engenharia, Universidade do Porto, Rua Dr. Roberto Frias s/n, 4200-465 Porto, Portugal
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46
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Evaluation of cross-linked enzyme aggregates of Lactobacillus cell-envelope proteinases, for protein degradation. FOOD AND BIOPRODUCTS PROCESSING 2015. [DOI: 10.1016/j.fbp.2015.01.004] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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47
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Production of combi-CLEAs of glycosidases utilized for aroma enhancement in wine. FOOD AND BIOPRODUCTS PROCESSING 2015. [DOI: 10.1016/j.fbp.2014.08.003] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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48
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Qian YC, Chen PC, Zhu XY, Huang XJ. Click synthesis of ionic strength-responsive polyphosphazene hydrogel for reversible binding of enzymes. RSC Adv 2015. [DOI: 10.1039/c5ra06649b] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A chemically crosslinkable cationic polyphosphazene was synthesized and fabricated into hydrogels via thiol–ene click chemistry for reversible enzyme binding.
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Affiliation(s)
- Yue-Cheng Qian
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization
- Department of Polymer Science and Engineering
- Zhejiang University
- Hangzhou 310027
- China
| | - Peng-Cheng Chen
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization
- Department of Polymer Science and Engineering
- Zhejiang University
- Hangzhou 310027
- China
| | - Xue-Yan Zhu
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization
- Department of Polymer Science and Engineering
- Zhejiang University
- Hangzhou 310027
- China
| | - Xiao-Jun Huang
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization
- Department of Polymer Science and Engineering
- Zhejiang University
- Hangzhou 310027
- China
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Talbert JN, Wang LS, Duncan B, Jeong Y, Andler SM, Rotello VM, Goddard JM. Immobilization and Stabilization of Lipase (CaLB) through Hierarchical Interfacial Assembly. Biomacromolecules 2014; 15:3915-22. [DOI: 10.1021/bm500970b] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Joey N. Talbert
- Department
of Food Science, University of Massachusetts − Amherst, 102
Holdsworth Way, Amherst, Massachusetts 01003, United States
| | - Li-Sheng Wang
- Department
of Chemistry, University of Massachusetts − Amherst, 379A
LGRT, 710 North Pleasant Street, Amherst, Massachusetts 01003, United States
| | - Bradley Duncan
- Department
of Chemistry, University of Massachusetts − Amherst, 379A
LGRT, 710 North Pleasant Street, Amherst, Massachusetts 01003, United States
| | - Youngdo Jeong
- Department
of Chemistry, University of Massachusetts − Amherst, 379A
LGRT, 710 North Pleasant Street, Amherst, Massachusetts 01003, United States
| | - Stephanie M. Andler
- Department
of Food Science, University of Massachusetts − Amherst, 102
Holdsworth Way, Amherst, Massachusetts 01003, United States
| | - Vincent M. Rotello
- Department
of Chemistry, University of Massachusetts − Amherst, 379A
LGRT, 710 North Pleasant Street, Amherst, Massachusetts 01003, United States
| | - Julie M. Goddard
- Department
of Food Science, University of Massachusetts − Amherst, 102
Holdsworth Way, Amherst, Massachusetts 01003, United States
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Frazão CJR, Silva NHC, Freire CSR, Silvestre AJD, Xavier AMRB, Tavares APM. Bacterial cellulose as carrier for immobilization of laccase: Optimization and characterization. Eng Life Sci 2014. [DOI: 10.1002/elsc.201400054] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Affiliation(s)
| | - Nuno H. C. Silva
- Department of Chemistry; CICECO, University of Aveiro; Aveiro Portugal
| | | | | | | | - Ana P. M. Tavares
- Associate Laboratory LSRE/LCM; Laboratory of Separation and Reaction Engineering (LSRE); Department of Chemical Engineering, Faculty of Engineering; University of Porto; Porto Portugal
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