Metal-Organic Frameworks as Biomimetic Catalysts

Spectroscopic Evidence of Energy Transfer in BODIPY-Incorporated Nano-Porphyrinic Metal-Organic Frameworks

Metal–organic frameworks (MOFs) represent a class of solid-state hybrid compounds consisting of multitopic organic struts and metal-based nodes that are interconnected by coordination bonds, and they are ideal for light harvesting due to their highly ordered structure. These structures can be constructed with chromophore organic ligands structures for the purpose of efficient light harvesting. Here, we prepared porphyrin-based nano-scaled MOFs (nPCN-222) with BODIPY and I₂BODIPY photosensitizers by incorporating BODIPY/I₂BODIPY into nPCN-222 (nPCN-BDP/nPCN-I₂BDP) and demonstrated resonance energy transfer from the donor (BODIPY/I₂BODIPY) to the acceptor (nPCN-222) resulting in greatly enhanced fluorescence of nPCN-222, as visually manifested by time-resolved and space-resolved fluorescence imaging of the nano-scaled MOFs.

Catalase active metal-organic framework synthesized by ligand regulation for the dual detection of glucose and cysteine

Mimic enzymes greatly improve the inherent insufficiencies of natural enzymes. Therefore, mimic enzyme sensors attract increasing research interest. Metal-organic framework (MOF) is emerging in the field of mimic enzyme catalysis due to its remarkable structural properties. In this paper, a colorimetric method is designed for rapid and sensitive detection of glucose and cysteine levels. The MOF Eu-pydc (pydc-2,5-pyridinedicarboxylic acid) is synthesized by a new strategy which is regulated by ligands at room temperature and found to have peroxidase activity. Then, the MOF is used as a mimic enzyme to catalyze chromogenic substrate (3,3',5,5'-tetramethylbenzidine, TMB) for colorimetric sensing of glucose. The developed method can accurately detect glucose in the range of 10 μM-1 mM (R² = 0.9958) with a relatively low detection limit about 6.9 μM. Moreover, a cysteine sensor with a detection limit of 0.28 μM is also established based on the disappearance of the color of oxTMB. Additionally, the proposed glucose sensor exhibits excellent selectivity and is successfully applied to blood glucose detection. At the same time, the detection of cysteine is also highly sensitive. In short, the dual sensor is fast, low cost, and convenient, and has great application potential in the diagnosis of disease.

Structure-directing role of immobilized polyoxometalates in the synthesis of porphyrinic Zr-based metal-organic frameworks

We evidence the structure-directing role of the PW12O403- polyoxometalate in porphyrinic MOF synthesis whereby it promotes the formation of the kinetic topology. Its immobilization into the MOF is successfully achieved at a high temperature yielding the kinetic MOF-525/PCN-224 phases, while prohibiting the formation of the thermodynamic MOF-545 product. A combined experimental/theoretical approach uses differential PDF and DFT calculations along with solid-state NMR to show the structural integrity of the POM and its location next to the Zr-based nodes.

Bioinspired chemistry at MOF secondary building units

This perspective describes recent developments and future directions in bioinorganic chemistry and biomimetic catalysis centered at metal–organic framework secondary building units.

The secondary building units (SBUs) in metal–organic frameworks (MOFs) support metal ions in well-defined and site-isolated coordination environments with ligand fields similar to those found in metalloenzymes. This burgeoning class of materials has accordingly been recognized as an attractive platform for metalloenzyme active site mimicry and biomimetic catalysis. Early progress in this area was slowed by challenges such as a limited range of hydrolytic stability and a relatively poor diversity of redox-active metals that could be incorporated into SBUs. However, recent progress with water-stable MOFs and the development of more sophisticated synthetic routes such as postsynthetic cation exchange have largely addressed these challenges. MOF SBUs are being leveraged to interrogate traditionally unstable intermediates and catalytic processes involving small gaseous molecules. This perspective describes recent advances in the use of metal centers within SBUs for biomimetic chemistry and discusses key future developments in this area.

Biomimetic O2 adsorption in an iron metal-organic framework for air separation

Bio-inspired motifs for gas binding and small molecule activation can be used to design more selective adsorbents for gas separation applications. Here, we report an iron metal–organic framework, Fe-BTTri (Fe₃[(Fe₄Cl)₃(BTTri)₈]₂·18CH₃OH, H₃BTTri = 1,3,5-tris(1H-1,2,3-triazol-5-yl)benzene), that binds O₂ in a manner similar to hemoglobin and therefore results in highly selective O₂ binding. As confirmed by gas adsorption studies and Mössbauer and infrared spectroscopy data, the exposed iron sites in the framework reversibly adsorb substantial amounts of O₂ at low temperatures by converting between high-spin, square-pyramidal Fe(ii) centers in the activated material to low-spin, octahedral Fe(iii)–superoxide sites upon gas binding. This change in both oxidation state and spin state observed in Fe-BTTri leads to selective and readily reversible O₂ binding, with the highest reported O₂/N₂ selectivity for any iron-based framework.

Bio-inspired motifs for gas binding and small molecule activation can be used to design more selective adsorbents for gas separation applications.

A cerium-based MOFzyme with multi-enzyme-like activity for the disruption and inhibition of fungal recolonization

A cerium-based metal–organic framework (Ce-MOF, denoted as AU-1) was synthesized using a solvothermal method by employing 4,4′,4′′-nitrilotribenzoic acid (H₃NTB) as the linker and cerium clusters as the metal center.

Thin Films of Fully Noble Metal-Free POM@MOF for Photocatalytic Water Oxidation

P₂W₁₈Co₄@MOF-545, which contains the sandwich-type polyoxometalate (POM) [(PW₉O₃₄)₂Co₄(H₂O)₂]^10- (P₂W₁₈Co₄) immobilized in the porphyrinic metal-organic framework (MOF), MOF-545, is a "three-in-one" (porosity + light capture + catalysis) heterogeneous photosystem for the oxygen-evolution reaction (OER). Thin films of this composite were synthesized on transparent and conductive indium tin oxide (ITO) supports using electrophoretic (EP) or drop-casting (DC) methods, thus providing easy-to-use devices. Their electro- and photocatalytic activities for OER were investigated. Remarkably, both types of films exhibit higher turnover numbers (TONs) than the original bulk material previously studied as a suspension for the photocatalytic OER, with TONs after 2 h equal to 1600 and 403 for DC and EP films, respectively, compared to 70 for the suspension. This difference of catalytic activities is related to the proportion of efficiently illuminated crystallites, whereby a DC thin film offers the largest proportion of POM@MOF crystallites exposed to light due to its lower thickness when compared to an EP film or crystals in suspension. Such devices can be easily recycled by simply removing them from the reaction medium and washing them before reuse. The films were fully characterized with extended X-ray absorption fine structure (EXAFS) and X-ray absorption near edge structure (XANES) spectroscopies, Raman, scanning electron microscopy, and electrochemistry before and after catalysis. The combination of all of these techniques shows the stability of both the POM and the MOF within the composite upon water-oxidation reaction.

Measuring and Modulating Substrate Confinement during Nitrogen-Atom Transfer in a Ru2-Based Metal-Organic Framework

The porosity and synthetic tunability of metal-organic frameworks (MOFs) has motivated interest in application of these materials as designer heterogeneous catalysts. While understanding substrate mobility in these materials is critical to the rational development of highly active catalyst platforms, experimental data are rarely available. Here we demonstrate kinetic isotope effect (KIE) analysis enables direct evaluation of the extent of substrate confinement as a function of material mesoporosity. Further, we provide evidence that suggests substrate confinement within a microporous Ru₂-based MOF gives rise to quantum tunneling during interstitial C-H amination. The reported data provide the first evidence for tunneling during interstitial MOF chemistry and illustrate an experimental strategy to evaluate the impact of material structure on substrate mobility in porous catalysts.

Recent Advances on Visible Light Metal-Based Photocatalysts for Polymerization under Low Light Intensity

In recent years, polymerization processes activated by light have attracted a great deal of interest due to the wide range of applications in which this polymerization technique is involved. Parallel to the traditional industrial applications ranging from inks, adhesives, and coatings, the development of high-tech applications such as nanotechnology and 3D-printing have given a revival of interest to this polymerization technique known for decades. To initiate a photochemical polymerization, the key element is the molecule capable to interact with light, i.e., the photoinitiator and more generally the photoinitiating system, as a combination of several components is often required to create the reactive species responsible for the polymerization process. With the aim of reducing the photoinitiator content while optimizing the polymerization yield and/or the polymerization speed, photocatalytic systems have been developed, enabling the photosensitizer to be regenerated during the polymerization process. In this review, an overview of the photocatalytic systems developed for polymerizations carried out under a low light intensity and visible light is provided. Over the years, a wide range of organometallic photocatalysts has been proposed, addressing both the polymerization efficiency and/or the toxicity, as well as environmental issues.

A nanoporous metal-organic framework as a renewable size-selective hydrogen-bonding catalyst in water

A novel squaramide-containing metal-organic framework (MOF) material has been designed and synthesized. A detailed X-ray crystal structure analysis showed that four squaramides of this MOF adopted two orientations in each dependent nanopore, confirming that two carbonyl and two N-H groups pointed simultaneously to the inside of the one-dimensional nanometer channel. The MOF was applied as an efficient bifunctional hydrogen-bonding catalyst for Michael additions of 1,3-dicarbonyl compounds to nitroalkenes in pure water, boosting the catalytic efficiency by up to approximately five times the value afforded by the homogeneous control and exhibiting a highly size-selective catalytic performance and good renewability. The catalytic mechanism was also discussed in detail. The present study provides a highly promising approach to achieving dual-activation catalytic centers in a single system, which function as microscopic chemical reactors that allow the interaction and fast transport of substrate molecules in their cavities.

Cyclohexene Oxidation with H2O2 over Metal-Organic Framework MIL-125(Ti): The Effect of Protons on Reactivity

The catalytic performance of the titanium-based metal–organic framework MIL-125 was evaluated in the selective oxidation of cyclohexene (CyH) with environmentally friendly oxidants, H2O2 and tBuOOH. The catalytic activity of MIL-125 as well as the oxidant utilization efficiency and selectivity toward epoxide and epoxide-derived products can be greatly improved by acid additives (HClO4 or CF3SO3H). In the presence of 1 molar equivalent (relative to Ti) of a proton source, the total selectivity toward CyH epoxide and trans-cyclohexane-1,2-diol reached 75–80% at 38–43% alkene conversion after 45 min of reaction with 1 equivalent of 30% H2O2 at 50 °C. With 50% H2O2 as the oxidant, the total selectivity toward heterolytic oxidation products increased up to 92% at the same level of alkene conversion. N2 adsorption, powder X-ray diffraction (PXRD), and infrared (IR) spectroscopy studies before and after the catalytic oxidations confirmed the absence of structural changes in the Metal–organic framework (MOF) structure. MIL-125 was stable toward titanium leaching, behaved as a truly heterogeneous catalyst, and could easily be recovered and reused several times without any loss of the catalytic properties.

Computational Approach to Molecular Catalysis by 3d Transition Metals: Challenges and Opportunities

Computational chemistry provides a versatile toolbox for studying mechanistic details of catalytic reactions and holds promise to deliver practical strategies to enable the rational in silico catalyst design. The versatile reactivity and nontrivial electronic structure effects, common for systems based on 3d transition metals, introduce additional complexity that may represent a particular challenge to the standard computational strategies. In this review, we discuss the challenges and capabilities of modern electronic structure methods for studying the reaction mechanisms promoted by 3d transition metal molecular catalysts. Particular focus will be placed on the ways of addressing the multiconfigurational problem in electronic structure calculations and the role of expert bias in the practical utilization of the available methods. The development of density functionals designed to address transition metals is also discussed. Special emphasis is placed on the methods that account for solvation effects and the multicomponent nature of practical catalytic systems. This is followed by an overview of recent computational studies addressing the mechanistic complexity of catalytic processes by molecular catalysts based on 3d metals. Cases that involve noninnocent ligands, multicomponent reaction systems, metal-ligand and metal-metal cooperativity, as well as modeling complex catalytic systems such as metal-organic frameworks are presented. Conventionally, computational studies on catalytic mechanisms are heavily dependent on the chemical intuition and expert input of the researcher. Recent developments in advanced automated methods for reaction path analysis hold promise for eliminating such human-bias from computational catalysis studies. A brief overview of these approaches is presented in the final section of the review. The paper is closed with general concluding remarks.

Complex Phase Behaviour and Structural Transformations of Metal-Organic Frameworks with Mixed Rigid and Flexible Bridging Ligands

Two new heteroleptic metal-organic framework materials show strong adsorption of H₂ and ethanol. [Co₂ (L1)(bdc)₂ ], where L1=N¹ ,N⁴ -bis(4-pyridinylmethyl)-2,5-dimethylbenzene-1,4-diamine and bdc is benzene-1,4-dicarboxylate, has a twofold interpenetrating pillared layer structure with pcu topology. It has a stepped, hysteretic EtOH adsorption that can be related to complicated phase and structural transformation behaviour that occurs on de-solvation and re-solvation, including major conformational changes to the geometry of the flexible L1 ligand. [Co₂ (L1)(bpdc)₂ ], where bpdc=biphenyl-4,4'-dicarboxylate, has a unique six-connected self-catenating framework structure. Solvation changes occur without significant structural change and a partially-hydrolysed material binds its own decomposition products as guests.

Label-free colorimetric detection of deoxyribonuclease I activity based on the DNA-enhanced peroxidase-like activity of MIL-53(Fe)

In this study, the effect of single-stranded DNA (ssDNA) on the intrinsic peroxidase-like activity of MIL-53(Fe) was investigated.

Functional nanomaterials with unique enzyme-like characteristics for sensing applications

We highlight the recent developments in functional nanomaterials with unique enzyme-like characteristics for sensing applications.

The enzyme-like catalytic hydrogen abstraction reaction mechanisms of cyclic hydrocarbons with magnesium-diluted Fe-MOF-74

Enzymatic heme and non-heme Fe(iv)–O species usually play an important role in hydrogen abstraction of biocatalytic reactions, yet duplicating the reactivity in biomimicry remains a great challenge. Based on Xiao et al.'s experimental work [Nat. Chem., 2014, 6(7), 590], we theoretically found that in the presence of the oxidant N₂O, the enzyme-like metal organic framework, i.e., magnesium-diluted Fe-MOF-74 [Fe/(Mg)-MOF-74] can activate the C–H bonds of 1,4-cyclohexadiene (CHD) into benzene with a two-step hydrogen abstraction mechanism based on the density functional theory (DFT) level. It is shown that the first transition state about the cleavage of the N–O bond of N₂O to form the Fe(iv)–O species is the rate-determining step with activation enthalpy of 19.4 kcal mol⁻¹ and the complete reaction is exothermic by 62.8 kcal mol⁻¹ on quintet rather than on triplet PES. In addition, we proposed a rebound mechanism of cyclic cyclohexane (CHA) hydroxylation to cyclohexanol which has not been studied experimentally. Note that the activation enthalpies on the first hydrogen abstraction for both cyclic CHD and cyclohexane are just 8.1 and 3.5 kcal mol⁻¹, respectively, which are less than that of 13.9 kcal mol⁻¹ for chained ethane. Most importantly, for the hydrogen abstraction of methane catalyzed by M/(Mg)-MOF-74 (M = Cu, Ni, Fe, and Co), we found that the activation enthalpies versus the C–H bond length of methane of TSs, NPA charge of the reacting oxyl atom have linear relationships with different slopes, i.e., shorter C–H bond and less absolute value of NPA charge of oxyl atom are associated with lower activation enthalpy; while for the activation of methane, ethane, propane and CHD catalyzed by Fe/(Mg)-MOF-74, there also exists positive correlations between activation enthalpies, bond dissociation energies (BDEs) and C–H bond lengths in TSs, respectively. We hope the present theoretical study may provide the guideline to predict the performance of MOFs in C–H bond activation reactions.

The enzyme-like catalytic hydrogen abstraction reaction of cyclic hydrocarbons.

Interior Decoration of Stable Metal-Organic Frameworks

Metal-organic frameworks (MOFs) are a diverse class of hybrid organic/inorganic crystalline materials composed of metal-containing nodes held in place by organic linkers. Through a discerning selection of these components, many properties such as the internal surface area, cavity size and shape, catalytic properties, thermal properties, and mechanical properties may be manipulated. Because of this high level of tunability, MOFs have been heralded as ideal platforms for various applications including gas storage, separation, catalysis, and chemical sensing. (1-8) Regrettably, these theoretical possibilities are limited by the reality of constraining conditions for solvothermal synthesis, which typically include high temperatures (usually over 100 °C), the use of specific solvents, and necessary exposure to acidic or basic conditions. In order to incorporate more delicate functionalities, postsynthesis decoration methods were developed. This feature article focuses on developed interior decoration methods for stable MOFs and the dynamic relationship between such methods and MOF stability. In particular, methods to transform organic, inorganic, and organometallic MOF parts as well as combination techniques, the generation of defects, and the inclusion of enzymes are addressed.

Rational Design of Mimic Multienzyme Systems in Hierarchically Porous Biomimetic Metal-Organic Frameworks

A facile approach was reported to establish mimic multienzyme systems with hierarchically porous (HP) biomimetic metal-organic frameworks (MOFs) and natural enzymes for tandem catalysis. The hierarchically porous MOF HP-PCN-224(Fe) with peroxidase-like activity and tunable hierarchical porosity was synthesized via a modulator-induced strategy. HP-PCN-224(Fe) not only acts as the enzyme-immobilization matrix but also as an effective enzyme mimic, which could cooperate with the immobilized natural enzyme to catalyze the cascade reactions. The mimic multienzyme systems were used for the efficient colorimetric detection of a series of biomolecules, including glucose and uric acid. This work displays the great potential to construct highly functional biocatalysts by integrating the merits of both natural enzymes and MOF mimics, which are promising for applications in biosensing and biomimetic catalysis.

Heterogeneous catalysis with encapsulated haem and other synthetic porphyrins: Harnessing the power of porphyrins for oxidation reactions

Encapsulated metalloporphyrins have been widely studied for their use as efficient heterogeneous catalysts, inspired by the known catalytic activity of porphyrins in haemoproteins. The oxidation of organic substrates by haemoproteins is one of the well-known roles of these proteins, in which the haem (ferriprotoporphyrin IX = FePPIX) cofactor is the centre of reactivity. While these porphyrins are highly efficient catalysts in the protein environment, once removed, they quickly lose their reactivity. It is for this reason that they have garnered much interest in the field of heterogeneous catalysis of oxidation reactions. This review details current research in the field, focusing on the application of encapsulated haem, and other synthetic metalloporphyrins, applied to oxidation reactions.

Solution-Phase Synthesis of Platinum Nanoparticle-Decorated Metal-Organic Framework Hybrid Nanomaterials as Biomimetic Nanoenzymes for Biosensing Applications

The synthesis of nanomaterials with specific properties and functions as biomimetic nanoenzymes has attracted extensive attention in the past decades due to their great potential to substitute natural enzymes. Herein, a facile and simple method for the preparation of platinum nanoparticle (PtNP)-decorated two-dimensional metal-organic framework (MOF) nanocomposites was developed. A ligand with heme-like structure, Fe(III) tetra(4-carboxyphenyl)porphine chloride (TCPP(Fe)), was applied to synthesize MOF nanosheets (denoted as Cu-TCPP(Fe) nanosheets) in high yield. Ultrathin Cu-TCPP(Fe) nanosheets with thickness less than 10 nm were used as a novel template for the growth of ultrasmall and uniform PtNPs. Significantly, the obtained hybrid nanomaterials (PtNPs/Cu-TCPP(Fe) hybrid nanosheets) exhibit enhanced peroxidase-like activity compared to PtNPs, Cu-TCPP(Fe) nanosheets, and the physical mixture of both due to the synergistic effect. On account of the excellent peroxidase-like activity of PtNPs/Cu-TCPP(Fe) hybrid nanosheets, we established a colorimetric method for sensitive and rapid detection of hydrogen peroxide. Furthermore, by combining with glucose oxidase, a cascade colorimetric method was established to further detect glucose with excellent sensitivity and selectivity.

Metalloporphyrin-based porous polymers prepared via click chemistry for size-selective adsorption of protein

Zinc porphyrin-based porous polymers (PPs-Zn) with different pore sizes were prepared by controlling the reaction condition of click chemistry, and the protein adsorption in PPs-Zn and the catalytic activity of immobilized enzyme were investigated. PPs-Zn-1 with 18 nm and PPS-Zn-2 with 90 nm of pore size were characterized by FTIR, NMR and nitrogen absorption experiments. The amount of adsorbed protein in PPs-Zn-1 was more than that in PPs-Zn-2 for small size proteins, such as lysozyme, lipase and bovine serum albumin (BSA). And for large size proteins including myosin and human fibrinogen (HFg), the amount of adsorbed protein in PPs-Zn-1 was less than that in PPs-Zn-2. The result indicates that the protein adsorption is size-selective in PPs-Zn. Both the protein size and the pore size have a significant effect on the amount of adsorbed protein in the PPs-Zn. Lipase and lysozyme immobilized in PPs-Zn exhibited excellent reuse stability.

A novel covalent post-synthetically modified MOF hybrid as a sensitive and selective fluorescent probe for Al3+ detection in aqueous media

A modified MOF named UiO-66-NH₂-SA was synthesized based on the covalent post synthetic attachment of the MOFs (UiO-66-NH₂) and salicylaldehyde via a Schiff-base reaction. The as-prepared functionalized UiO-66-NH₂-SA not only maintains its structural integrity during the PSM process, but also shows excellent luminescence and good fluorescence stability in water. It was further utilized as a novel fluorescent probe for detecting of Al³⁺. The fluorescence intensity of UiO-66-NH₂-SA increased linearly upon increasing the concentration of Al³⁺ in the range of 0-500 μM with a detection limit of 6.98 μM. The possible mechanism is discussed. This study presents a new ratiometric and colorimetric Al³⁺ fluorescent sensor. The good fluorescence stability of UiO-66-NH₂-SA in aqueous media, the low detection limit and the broad linear in sensing Al³⁺ indicate its high potential in practical applications.

Bifunctional Porphyrin-Based Nano-Metal-Organic Frameworks: Catalytic and Chemosensing Studies

The use of 5,10,15,20-tetrakis( p-phenylphosphonic acid)porphyrin (H₁₀TPPA) as a linker in the preparation of porphyrin-based metal-organic frameworks (Por-MOFs) through coordination to lanthanides cations is reported. The resulting unprecedented materials, formulated as [M(H₉TPPA)(H₂O) _x]Cl₂· yH₂O [ x + y = 7; M³⁺ = La³⁺ (1), Yb³⁺ (2), and Y³⁺ (3)], prepared using hydrothermal synthesis, were extensively characterized in the solid-state, for both their structure and thermal robustness, using a myriad of solid-state advanced techniques. Materials were evaluated as heterogeneous catalysts in the oxidation of thioanisole by H₂O₂ and as chemosensors for detection of nitroaromatic compounds (NACs). Nano-Por-MOFs 1-3 proved to be effective as heterogeneous catalysts in the sulfoxidation of thioanisole, with Por-MOF 1 exhibiting the best catalytic performance with a conversion of thioanisole of 89% in the first cycle and with a high selectivity for the sulfoxide derivative (90%). The catalyst maintained its activity roughly constant in three consecutive runs. Por-MOFs 1-3 can be employed as chemosensors because of a measured fluorescence quenching up to 70% for nitrobenzene, 1,4-dinitrobenzene, 4-nitrophenol, and phenol, with 2,4,6-trinitrophenol exhibiting a peculiar fluorescence profile.

C-H functionalization by high-valent Cp*Co(iii) catalysis

Significant progress has been accomplished in directed C-H functionalization through the use of earth-abundant and inexpensive first-row transition metals. Among these base metals, Co is especially attractive in view of its versatile applications in C-H functionalization, in both low- and high-valent states. In this vein, catalytic Co(iii) species can be generated from the dissociation of a Cp*Co(iii) catalyst or through the oxidation of a low-valent cobalt catalyst in the presence of an oxidant. In this feature article, we will discuss the breakthroughs in Cp*Co(iii)-promoted C-H functionalization. In this field, C(sp²)-H functionalization has been extensively studied and developed. In contrast, few C(sp³)-H functionalization reactions have been reported.