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Gallois N, Alpha-Bazin B, Bremond N, Ortet P, Barakat M, Piette L, Mohamad Ali A, Lemaire D, Legrand P, Theodorakopoulos N, Floriani M, Février L, Den Auwer C, Arnoux P, Berthomieu C, Armengaud J, Chapon V. Discovery and characterization of UipA, a uranium- and iron-binding PepSY protein involved in uranium tolerance by soil bacteria. THE ISME JOURNAL 2022; 16:705-716. [PMID: 34556817 PMCID: PMC8857325 DOI: 10.1038/s41396-021-01113-7] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Revised: 09/01/2021] [Accepted: 09/08/2021] [Indexed: 02/08/2023]
Abstract
Uranium is a naturally occurring radionuclide. Its redistribution, primarily due to human activities, can have adverse effects on human and non-human biota, which poses environmental concerns. The molecular mechanisms of uranium tolerance and the cellular response induced by uranium exposure in bacteria are not yet fully understood. Here, we carried out a comparative analysis of four actinobacterial strains isolated from metal and radionuclide-rich soils that display contrasted uranium tolerance phenotypes. Comparative proteogenomics showed that uranyl exposure affects 39-47% of the total proteins, with an impact on phosphate and iron metabolisms and membrane proteins. This approach highlighted a protein of unknown function, named UipA, that is specific to the uranium-tolerant strains and that had the highest positive fold-change upon uranium exposure. UipA is a single-pass transmembrane protein and its large C-terminal soluble domain displayed a specific, nanomolar binding affinity for UO22+ and Fe3+. ATR-FTIR and XAS-spectroscopy showed that mono and bidentate carboxylate groups of the protein coordinated both metals. The crystal structure of UipA, solved in its apo state and bound to uranium, revealed a tandem of PepSY domains in a swapped dimer, with a negatively charged face where uranium is bound through a set of conserved residues. This work reveals the importance of UipA and its PepSY domains in metal binding and radionuclide tolerance.
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Affiliation(s)
- Nicolas Gallois
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France
| | - Béatrice Alpha-Bazin
- grid.5583.b0000 0001 2299 8025Département Médicaments et Technologies pour la Santé (DMTS), Université Paris-Saclay, CEA, INRAE, SPI, 30200 Bagnols-sur-Cèze, France
| | - Nicolas Bremond
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France
| | - Philippe Ortet
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France
| | - Mohamed Barakat
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France
| | - Laurie Piette
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France
| | - Abbas Mohamad Ali
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France
| | - David Lemaire
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France
| | - Pierre Legrand
- grid.426328.9Synchrotron SOLEIL. L’Orme des Merisiers Saint-Aubin. BP 48, 91192 Gif-sur-Yvette, France
| | - Nicolas Theodorakopoulos
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France ,grid.418735.c0000 0001 1414 6236IRSN, PSE-ENV/SRTE/LR2T, B.P. 3, 13115 Saint Paul-lez-Durance, Cedex France
| | - Magali Floriani
- grid.418735.c0000 0001 1414 6236IRSN, PSE-ENV/SRTE/LECO, B.P. 3, 13115 Saint Paul-lez-Durance, Cedex France
| | - Laureline Février
- grid.418735.c0000 0001 1414 6236IRSN, PSE-ENV/SRTE/LR2T, B.P. 3, 13115 Saint Paul-lez-Durance, Cedex France
| | - Christophe Den Auwer
- grid.462124.70000 0004 0384 8488Université Côte d’Azur, CNRS, ICN, 06108 Nice, France
| | - Pascal Arnoux
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France
| | - Catherine Berthomieu
- grid.5399.60000 0001 2176 4817Aix Marseille Université, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, France
| | - Jean Armengaud
- grid.5583.b0000 0001 2299 8025Département Médicaments et Technologies pour la Santé (DMTS), Université Paris-Saclay, CEA, INRAE, SPI, 30200 Bagnols-sur-Cèze, France
| | - Virginie Chapon
- Aix Marseille Université, CEA, CNRS, BIAM, 13108, Saint Paul-Lez-Durance, France.
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Sarthou MCM, Devime F, Baggio C, Figuet S, Alban C, Bourguignon J, Ravanel S. Calcium-permeable cation channels are involved in uranium uptake in Arabidopsis thaliana. JOURNAL OF HAZARDOUS MATERIALS 2022; 424:127436. [PMID: 34638071 DOI: 10.1016/j.jhazmat.2021.127436] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2021] [Revised: 09/28/2021] [Accepted: 10/03/2021] [Indexed: 06/13/2023]
Abstract
Uranium (U) is a non-essential and toxic element that is taken up by plants from the environment. The assimilation pathway of U is still unknown in plants. In this study, we provide several evidences that U is taken up by the roots of Arabidopsis thaliana through Ca2+-permeable cation channels. First, we showed that deprivation of Arabidopsis plants with calcium induces a 1.5-fold increase in the capacity of roots to accumulate U, suggesting that calcium deficiency promotes the radionuclide import pathway. Second, we showed that external calcium inhibits U accumulation in roots, suggesting a common route for the uptake of both cations. Third, we found that gadolinium, nifedipine and verapamil inhibit the absorption of U, suggesting that different types of Ca2+-permeable channels serve as a route for U uptake. Last, we showed that U bioaccumulation in Arabidopsis mutants deficient for the Ca2+-permeable channels MCA1 and ANN1 is decreased by 40%. This suggests that MCA1 and ANN1 contribute to the absorption of U in different zones and cell layers of the root. Together, our results describe for the first time the involvement of Ca2+-permeable cation channels in the cellular uptake of U.
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Affiliation(s)
- Manon C M Sarthou
- Univ. Grenoble Alpes, INRAE, CEA, CNRS, IRIG, LPCV, 38000 Grenoble, France
| | - Fabienne Devime
- Univ. Grenoble Alpes, INRAE, CEA, CNRS, IRIG, LPCV, 38000 Grenoble, France
| | - Célia Baggio
- Univ. Grenoble Alpes, INRAE, CEA, CNRS, IRIG, LPCV, 38000 Grenoble, France
| | - Sylvie Figuet
- Univ. Grenoble Alpes, INRAE, CEA, CNRS, IRIG, LPCV, 38000 Grenoble, France
| | - Claude Alban
- Univ. Grenoble Alpes, INRAE, CEA, CNRS, IRIG, LPCV, 38000 Grenoble, France
| | | | - Stéphane Ravanel
- Univ. Grenoble Alpes, INRAE, CEA, CNRS, IRIG, LPCV, 38000 Grenoble, France.
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53
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Uranium contamination in drinking water as a health concern in Uttarakhand, India. J Radioanal Nucl Chem 2022. [DOI: 10.1007/s10967-021-08128-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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54
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Revel B, Catty P, Ravanel S, Bourguignon J, Alban C. High-affinity iron and calcium transport pathways are involved in U(VI) uptake in the budding yeast Saccharomyces cerevisiae. JOURNAL OF HAZARDOUS MATERIALS 2022; 422:126894. [PMID: 34416697 DOI: 10.1016/j.jhazmat.2021.126894] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2021] [Revised: 07/20/2021] [Accepted: 08/10/2021] [Indexed: 06/13/2023]
Abstract
Uranium (U) is a naturally-occurring radionuclide that is toxic for all living organisms. To date, the mechanisms of U uptake are far from being understood. Here we provide a direct characterization of the transport machineries capable of transporting U, using the yeast Saccharomyces cerevisiae as a unicellular eukaryote model. First, we evidenced a metabolism-dependent U transport in yeast. Then, competition experiments with essential metals allowed us to identify calcium, iron and copper entry pathways as potential routes for U uptake. The analysis of various metal transport mutants revealed that mutant affected in calcium (mid1Δ and cch1Δ) and Fe(III) (ftr1Δ) transport, exhibited highly reduced U uptake rates and accumulation, demonstrating the implication of the calcium channel Mid1/Cch1 and the iron permease Ftr1 in U uptake. Finally, expression of the Mid1 gene into the mid1Δ mutant restored U uptake levels of the wild type strain, underscoring the central role of the Mid1/Cch1 calcium channel in U absorption process in yeast. Our results also open up the opportunity for rapid screening of U-transporter candidates by functional expression in yeast, before their validation in more complex higher eukaryote model systems.
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Affiliation(s)
- Benoît Revel
- Univ. Grenoble Alpes, CEA, INRAE, CNRS, IRIG, LPCV, 38000 Grenoble, France
| | - Patrice Catty
- Univ. Grenoble Alpes, CEA, CNRS, IRIG, LCBM, 38000 Grenoble, France
| | - Stéphane Ravanel
- Univ. Grenoble Alpes, CEA, INRAE, CNRS, IRIG, LPCV, 38000 Grenoble, France
| | | | - Claude Alban
- Univ. Grenoble Alpes, CEA, INRAE, CNRS, IRIG, LPCV, 38000 Grenoble, France.
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55
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Brix K, Baur S, Haben A, Kautenburger R. Building the bridge between U(VI) and Ca-bentonite - Influence of concentration, ionic strength, pH, clay composition and competing ions. CHEMOSPHERE 2021; 285:131445. [PMID: 34265724 DOI: 10.1016/j.chemosphere.2021.131445] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 07/02/2021] [Accepted: 07/03/2021] [Indexed: 06/13/2023]
Abstract
In the context of a high-level nuclear waste disposal, the retention of U(VI) on non-pre-treated Ca-bentonite as potential technical barrier is studied. The objective of this study is to reveal the retention behaviour of U(VI) under extreme geochemical conditions, such as hyperalkaline pH range as well as high salinity at the same time, and taking into account other relevant parameters. This should lead to a better understanding of necessary safety precautions for avoiding a release of U(VI) in the environment. Batch experiments were conducted to determine the influence of the initial U(VI) concentration, salinity, pH value, clay composition and the presence of other elements (Ca(II), I-, Cs(I), Eu(III)). After the sorption experiments, the remaining U(VI) concentration in solution was determined via mass spectrometry with inductively coupled plasma. U(VI) can be immobilised from 10% to 100% under all investigated conditions. Precipitation plays a role in the U(VI) retention but only at higher concentrations (≥10-5 mol L-1). The retention is reversible especially with decreasing pH (<10.5) as the aquo complex Ca2UO2(CO3)3(aq) is formed. Ca(II) strongly enhances the U(VI) adsorption onto Ca-bentonite in the hyperalkaline pH range, probably due to the formation of Ca(II)-bridges. The best retention could be observed on natural bentonite compared to pure montmorillonite and altered bentonite. From a waste cocktail containing important elements of the repository inventory (Cs(I), Eu(III), U(VI) and iodide), only Eu(III) as homologous element to trivalent actinoids competes with U(VI) for binding sites, especially at low metal concentrations, but also facilitates the precipitation at higher concentrations.
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Affiliation(s)
- Kristina Brix
- Institute of Inorganic Solid State Chemistry - WASTe-Elemental Analysis Group, Saarland University, Saarbrücken, Germany.
| | - Sandra Baur
- Institute of Inorganic Solid State Chemistry - WASTe-Elemental Analysis Group, Saarland University, Saarbrücken, Germany
| | - Aaron Haben
- Institute of Inorganic Solid State Chemistry - WASTe-Elemental Analysis Group, Saarland University, Saarbrücken, Germany
| | - Ralf Kautenburger
- Institute of Inorganic Solid State Chemistry - WASTe-Elemental Analysis Group, Saarland University, Saarbrücken, Germany
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56
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You W, Peng W, Tian Z, Zheng M. Uranium bioremediation with U(VI)-reducing bacteria. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 798:149107. [PMID: 34325147 DOI: 10.1016/j.scitotenv.2021.149107] [Citation(s) in RCA: 42] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 07/13/2021] [Accepted: 07/13/2021] [Indexed: 06/13/2023]
Abstract
Uranium (U) pollution is an environmental hazard caused by the development of the nuclear industry. Microbial reduction of hexavalent uranium (U(VI)) to tetravalent uranium (U(IV)) reduces U solubility and mobility and has been proposed as an effective method to remediate uranium contamination. In this review, U(VI) remediation with respect to U(VI)-reducing bacteria, mechanisms, influencing factors, products, and reoxidation are systematically summarized. Reportedly, some metal- and sulfate-reducing bacteria possess excellent U(VI) reduction capability through mechanisms involving c-type cytochromes, extracellular pili, electron shuttle, or thioredoxin reduction. In situ remediation has been demonstrated as an ideal strategy for large-scale degradation of uranium contaminants than ex situ. However, U(VI) reduction efficiency can be affected by various factors, including pH, temperature, bicarbonate, electron donors, and coexisting metal ions. Furthermore, it is noteworthy that the reduction products could be reoxidized when exposed to oxygen and nitrate, inevitably compromising the remediation effects, especially for non-crystalline U(IV) with weak stability.
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Affiliation(s)
- Wenbo You
- Key Laboratory of Regional Energy Systems Optimization, Ministry of Education, College of Environmental Science and Engineering, North China Electric Power University, Beijing 102206, China
| | - Wanting Peng
- Key Laboratory of Regional Energy Systems Optimization, Ministry of Education, College of Environmental Science and Engineering, North China Electric Power University, Beijing 102206, China
| | - Zhichao Tian
- Key Laboratory of Regional Energy Systems Optimization, Ministry of Education, College of Environmental Science and Engineering, North China Electric Power University, Beijing 102206, China
| | - Maosheng Zheng
- Key Laboratory of Regional Energy Systems Optimization, Ministry of Education, College of Environmental Science and Engineering, North China Electric Power University, Beijing 102206, China.
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57
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Su Y, Wenzel M, Paasch S, Seifert M, Böhm W, Doert T, Weigand JJ. Recycling of Brewer's Spent Grain as a Biosorbent by Nitro-Oxidation for Uranyl Ion Removal from Wastewater. ACS OMEGA 2021; 6:19364-19377. [PMID: 34368523 PMCID: PMC8340112 DOI: 10.1021/acsomega.1c00589] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Accepted: 06/25/2021] [Indexed: 06/13/2023]
Abstract
Developing biosorbents derived from agro-industrial biomass is considered as an economic and sustainable method for dealing with uranium-contaminated wastewater. The present study explores the feasibility of oxidizing a representative protein-rich biomass, brewer's spent grain (BSG), to an effective and reusable uranyl ion adsorbent to reduce the cost and waste generation during water treatment. The unique composition of BSG favors the oxidation process and yields in a high carboxyl group content (1.3 mmol/g) of the biosorbent. This makes BSG a cheap, sustainable, and suitable raw material independent from pre-treatment. The oxidized brewer's spent grain (OBSG) presents a high adsorption capacity of U(VI) of 297.3 mg/g (c 0(U) = 900 mg/L, pH = 4.7) and fast adsorption kinetics (1 h) compared with other biosorbents reported in the literature. Infrared spectra (Fourier transform infrared), 13C solid-state nuclear magnetic resonance spectra, scanning electron microscopy, energy-dispersive X-ray spectroscopy, and thermogravimetric analysis were employed to characterize the biosorbents and reveal the adsorption mechanisms. The desorption and reusability of OBSG were tested for five cycles, resulting in a remaining adsorption of U(VI) of 100.3 mg/g and a desorption ratio of 89%. This study offers a viable and sustainable approach to convert agro-industrial waste into effective and reusable biosorbents for uranium removal from wastewater.
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Affiliation(s)
- Yi Su
- Chair
of Inorganic Molecular Chemistry, TU Dresden, 01062 Dresden, Germany
| | - Marco Wenzel
- Chair
of Inorganic Molecular Chemistry, TU Dresden, 01062 Dresden, Germany
| | - Silvia Paasch
- Chair
of Bioanalytical Chemistry, TU Dresden, 01062 Dresden, Germany
| | - Markus Seifert
- Chair
of Inorganic Molecular Chemistry, TU Dresden, 01062 Dresden, Germany
| | - Wendelin Böhm
- Chair
of Food Chemistry, TU Dresden, 01062 Dresden, Germany
| | - Thomas Doert
- Chair
of Inorganic Chemistry II, TU Dresden, 01062 Dresden, Germany
| | - Jan J. Weigand
- Chair
of Inorganic Molecular Chemistry, TU Dresden, 01062 Dresden, Germany
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58
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Chen L, Liu J, Zhang W, Zhou J, Luo D, Li Z. Uranium (U) source, speciation, uptake, toxicity and bioremediation strategies in soil-plant system: A review. JOURNAL OF HAZARDOUS MATERIALS 2021; 413:125319. [PMID: 33582470 DOI: 10.1016/j.jhazmat.2021.125319] [Citation(s) in RCA: 79] [Impact Index Per Article: 26.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Revised: 01/23/2021] [Accepted: 02/02/2021] [Indexed: 06/12/2023]
Abstract
Uranium(U), a highly toxic radionuclide, is becoming a great threat to soil health development, as returning nuclear waste containing U into the soil systems is increased. Numerous studies have focused on: i) tracing the source in U contaminated soils; ii) exploring U geochemistry; and iii) assessing U phyto-uptake and its toxicity to plants. Yet, there are few literature reviews that systematically summarized the U in soil-plant system in past decade. Thus, we present its source, geochemical behavior, uptake, toxicity, detoxification, and bioremediation strategies based on available data, especially published from 2018 to 2021. In this review, we examine processes that can lead to the soil U contamination, indicating that mining activities are currently the main sources. We discuss the relationship between U bioavailability in the soil-plant system and soil conditions including redox potential, soil pH, organic matter, and microorganisms. We then review the soil-plant transfer of U, finding that U mainly accumulates in roots with a quite limited translocation. However, plants such as willow, water lily, and sesban are reported to translocate high U levels from roots to aerial parts. Indeed, U does not possess any identified biological role, but provokes numerous deleterious effects such as reducing seed germination, inhibiting plant growth, depressing photosynthesis, interfering with nutrient uptake, as well as oxidative damage and genotoxicity. Yet, plants tolerate U toxicity via various defense strategies including antioxidant enzymes, compartmentalization, and phytochelatin. Moreover, we review two biological remediation strategies for U-contaminated soil: (i) phytoremediation and (ii) microbial remediation. They are quite low-cost and eco-friendly compared with traditional physical or chemical remediation technologies. Finally, we conclude some promising research challenges regarding U biogeochemical behavior in soil-plant systems. This review, thus, further indicates that the combined application of U low accumulators and microbial inoculants may be an effective strategy for the bioremediation of U-contaminated soils.
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Affiliation(s)
- Li Chen
- State Key Laboratory of Grassland Agro-ecosystems; Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs; Engineering Research Center of Grassland Industry, Ministry of Education, Gansu Tech Innovation Center of Western China Grassland Industry; College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730000, Gansu, PR China
| | - Jinrong Liu
- State Key Laboratory of Grassland Agro-ecosystems; Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs; Engineering Research Center of Grassland Industry, Ministry of Education, Gansu Tech Innovation Center of Western China Grassland Industry; College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730000, Gansu, PR China.
| | - Weixiong Zhang
- Third Institute Geological and Mineral Exploration of Gansu Provincial Bureau of Geology and Mineral Resources, Lanzhou 730030, Gansu, PR China
| | - Jiqiang Zhou
- Gansu Nonferrous Engineering Exploration & Design Research Institute, Lanzhou 730030, Gansu, PR China
| | - Danqi Luo
- State Key Laboratory of Grassland Agro-ecosystems; Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs; Engineering Research Center of Grassland Industry, Ministry of Education, Gansu Tech Innovation Center of Western China Grassland Industry; College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730000, Gansu, PR China
| | - Zimin Li
- Université catholique de Louvain (UCLouvain), Earth and Life Institute, Soil Science, Louvain-La-Neuve 1348, Belgium.
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Xie J, Dai Y, Wang Y, Liu Y, Zhang Z, Wang Y, Tao Q, Liu Y. Facile immobilization of NiFeAl-LDHs into electrospun poly(vinyl alcohol)/poly(acrylic acid) nanofibers for uranium adsorption. J Radioanal Nucl Chem 2021. [DOI: 10.1007/s10967-021-07860-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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60
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Kolhe N, Kulkarni A, Zinjarde S, Acharya C. Transcriptome Response of the Tropical Marine Yeast Yarrowia lipolytica on Exposure to Uranium. Curr Microbiol 2021; 78:2033-2043. [PMID: 33772621 DOI: 10.1007/s00284-021-02459-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Accepted: 03/11/2021] [Indexed: 11/30/2022]
Abstract
In our earlier investigation, we reported the consequences of uranium (U)-induced oxidative stress and cellular defense mechanisms alleviating uranium toxicity in the marine yeast Yarrowia lipolytica NCIM 3589. However, there is lack of information on stress response towards uranium toxicity at molecular level in this organism. To gain an insight on this, transcriptional response of Y. lipolytica after exposure to 50 µM uranium was investigated by RNA sequencing at the global level in this study. The de novo transcriptome analysis (in triplicates) revealed 56 differentially expressed genes with significant up-regulation and down-regulation of 33 and 23 transcripts, respectively, in U-exposed yeast cells as compared to the control, U-unexposed cells. Highly up-regulated genes under U-treated condition were identified to be primarily involved in transport, DNA damage repair and oxidative stress. The major reaction of Y. lipolytica to uranium exposure was the activation of oxidative stress response mechanisms to protect the important biomolecules of the cells. On the other hand, genes involved in cell wall and cell cycle regulation were significantly down-regulated. Overall, the transcriptional profiling by RNA sequencing to stress-inducing concentration of uranium sheds light on the various responses of Y. lipolytica for coping with uranium toxicity, providing a foundation for understanding the molecular interactions between uranium and this marine yeast.
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Affiliation(s)
- Nilesh Kolhe
- Institute of Bioinformatics and Biotechnology, Savitribai Phule Pune University, Pune, 411007, India.,Molecular Biology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, 400085, India
| | - Abhijeet Kulkarni
- Bioinformatics Centre, Savitribai Phule Pune University, Pune, 411007, India
| | - Smita Zinjarde
- Institute of Bioinformatics and Biotechnology, Savitribai Phule Pune University, Pune, 411007, India.
| | - Celin Acharya
- Molecular Biology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, 400085, India. .,Homi Bhabha National Institute, Anushakti Nagar, Trombay, Mumbai, 400094, India.
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61
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Liu Y, Chen C, He L, Hu L, Ding Z, Liao S, Tan N. Preparation of a Fungal-Modified Material Linked by the Monoamidoxime Terminal Open-Chain Polyether and Its Uranyl Adsorption. Ind Eng Chem Res 2021. [DOI: 10.1021/acs.iecr.0c05213] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yaqing Liu
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
| | - Can Chen
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
| | - Leqing He
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
| | - Lin Hu
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
| | - Zui Ding
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
| | - Sen Liao
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
| | - Ni Tan
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
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62
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Mamaev D, Zvyagilskaya R. Yarrowia lipolytica: a multitalented yeast species of ecological significance. FEMS Yeast Res 2021; 21:6141120. [PMID: 33595651 DOI: 10.1093/femsyr/foab008] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Accepted: 02/13/2021] [Indexed: 02/07/2023] Open
Abstract
Yarrowia lipolytica is characterized by GRAS (Generally regarded as safe) status, the versatile substrate utilization profile, rapid utilization rates, metabolic diversity and flexibility, the unique abilities to tolerate to extreme environments (acidic, alkaline, hypersaline, heavy metal-pollutions and others) and elevated biosynthesis and secreting capacities. These advantages of Y. lipolytica allow us to consider it as having great ecological significance. Unfortunately, there is still a paucity of relevant review data. This mini-review highlights ecological ubiquity of Y. lipolytica species, their ability to diversify and colonize specialized niches. Different Y. lipolytica strains, native and engineered, are beneficial in degrading many environmental pollutants causing serious ecological problems worldwide. In agriculture has a potential to be a bio-control agent by stimulating plant defense response, and an eco-friendly bio-fertilizer. Engineered strains of Y. lipolytica have become a very promising platform for eco-friendly production of biofuel, commodities, chemicals and secondary metabolites of plant origin, obtaining which by other method were limited or economically infeasible, or were accompanied by stringent environmental problems. Perspectives to use potential of Y. lipolytica's capacities for industrial scale production of valuable compounds in an eco-friendly manner are proposed.
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Affiliation(s)
- Dmitry Mamaev
- Bach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, 33, bld. 2 Leninsky Ave., Moscow 119071, Russian Federation
| | - Renata Zvyagilskaya
- Bach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, 33, bld. 2 Leninsky Ave., Moscow 119071, Russian Federation
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Yu L, Li W, Chu J, Chen C, Li X, Tang W, Xia B, Xiong Z. Uranium inhibits mammalian mitochondrial cytochrome c oxidase and ATP synthase. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 271:116377. [PMID: 33401214 DOI: 10.1016/j.envpol.2020.116377] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2020] [Revised: 12/17/2020] [Accepted: 12/21/2020] [Indexed: 06/12/2023]
Abstract
As an emerging pollutant, uranium poses serious concerns to ecological and human health. The kidney has been established as a major deposition site and the most sensitive target organ for uranium poisoning, and the underlying toxicological mechanisms have been associated with oxidative stress and mitochondrial respiration. However, the identities of key molecular targets in uranium-induced toxicity remain elusive. In this study, we comprehensively evaluated the in vitro effects of uranium on ten critical enzymes in the mitochondrial respiration pathway and discovered that respiratory chain complex IV (cytochrome c oxidase) and complex V (ATP synthase) were strongly inhibited. The inhibitory effects were validated with mitochondria from human renal proximal tubule cells-the most affected renal site in uranium poisoning. The IC50 values (around 1 mg/L) are physiologically relevant, as they are comparable to known kidney accumulation levels in uranium poisoning. In addition, these inhibitory effects could explain the well-documented uranium-induced reactive oxygen species generation and mitochondrial alterations. In conclusion, cytochrome c oxidase and ATP synthase are possibly key molecular targets underlying the toxic effects of uranium.
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Affiliation(s)
- Libing Yu
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621907, China.
| | - Wenjing Li
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621907, China; School of Life Science and Engineering, Southwest University of Science and Technology, No. 59, Middle Section of Qinglong Avenue, Mianyang, 621010, China
| | - Jian Chu
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621907, China
| | - Chun Chen
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621907, China
| | - Xijian Li
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621907, China
| | - Wei Tang
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621907, China
| | - Binyuan Xia
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621907, China
| | - Zhonghua Xiong
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621907, China
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Faheim AA, Elsawy M, Salem SS, Abd El-Wahab H. Novel antimicrobial paint based on binary and ternary dioxouranium (VI) complexes for surface coating applications. PROGRESS IN ORGANIC COATINGS 2021; 151:106027. [DOI: 10.1016/j.porgcoat.2020.106027] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
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65
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Kumar S, Zhao M, Zhang H, Rahman MA, Luo C, Rahman MM. Distribution, contamination status and source of trace elements in the soil around brick kilns. CHEMOSPHERE 2021; 263:127882. [PMID: 32818846 DOI: 10.1016/j.chemosphere.2020.127882] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2020] [Revised: 07/20/2020] [Accepted: 07/30/2020] [Indexed: 06/11/2023]
Abstract
This study reports the distribution, contamination level, and possible sources of 54 metal (oid)s in the soils found around brick kilns in south-western Bangladesh. In total, 40 soil samples were collected from the vicinity of five brick kilns in four directions at 250 m intervals. This study reveals that the mean respective concentrations of caesium (Cs), beryllium (Be), lead (Pb), cerium (Ce), praseodymium (Pr), neodymium (Nd), samarium (Sm), europium (Eu), dysprosium (Dy), holmium (Ho), terbium (Tb), erbium (Er), thulium (Tm), ytterbium (Yb), thorium (Th), germanium (Ge), yttrium (Y), zirconium (Zr), niobium (Nb), silver (Ag), hafnium (Hf), tantalum (Ta), and tungsten (W), were 7.83, 3.19, 22.93, 85.93, 9.61, 36.86, 7.30, 1.23, 5.76, 1.13, 0.99, 3.14, 0.45, 2.91, 17.72, 3.04, 30.07, 185.13, 13.99, 0.30, 5.34, 1.26, and 2.61 μg g-1. Furthermore, those amounts exceeded their respective shale values. The pollution evaluation indices indicated a moderate level of contamination by Cs, Pb, Th, Ag, Hf, Ta, W, and lanthanides but excluding lanthanum (La) and lutetium (Lu). The pollution load index revealed pollution at two brickfields. Multivariate statistics reported that coal combustion in the brick kilns is the primary source of lanthanides, actinides, Y, Zr, and Hf in the soil, while other elements derived mostly from natural sources. A portion originated from coal combustion in brick kilns and agricultural activities. Changes in metal (oid)s concentrations were non-linear with the distance between the kilns and sampling points. Consequently, further studies are required and should consider meteorological factors and severity of human impact in the study area.
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Affiliation(s)
- Sazal Kumar
- Key Laboratory of Ocean and Marginal Sea Geology, South China Sea Institute of Oceanology, Innovation Academy of South China Sea Ecology and Environmental Engineering, Chinese Academy of Sciences, Guangzhou, 510301, China; University of Chinese Academy of Sciences, Beijing, 1000049, China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, 511458, China
| | - Meixia Zhao
- Key Laboratory of Ocean and Marginal Sea Geology, South China Sea Institute of Oceanology, Innovation Academy of South China Sea Ecology and Environmental Engineering, Chinese Academy of Sciences, Guangzhou, 510301, China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, 511458, China.
| | - Haiyang Zhang
- Key Laboratory of Ocean and Marginal Sea Geology, South China Sea Institute of Oceanology, Innovation Academy of South China Sea Ecology and Environmental Engineering, Chinese Academy of Sciences, Guangzhou, 510301, China; University of Chinese Academy of Sciences, Beijing, 1000049, China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, 511458, China
| | - Md Aminur Rahman
- Global Centre for Environmental Remediation, Faculty of Science, The University of Newcastle, Callaghan, NSW, 2308, Australia; Department of Public Health Engineering (DPHE), Zonal Laboratory, Khulna, 9100, Bangladesh
| | - Chuanxiu Luo
- Key Laboratory of Ocean and Marginal Sea Geology, South China Sea Institute of Oceanology, Innovation Academy of South China Sea Ecology and Environmental Engineering, Chinese Academy of Sciences, Guangzhou, 510301, China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, 511458, China
| | - Mohammad Mahmudur Rahman
- Global Centre for Environmental Remediation, Faculty of Science, The University of Newcastle, Callaghan, NSW, 2308, Australia
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Lai JL, Zhang-Xuan D, Xiao-Hui JI, Xue-Gang L. Absorption and interaction mechanisms of uranium & cadmium in purple sweet potato(Ipomoea batatas L.). JOURNAL OF HAZARDOUS MATERIALS 2020; 400:123264. [PMID: 32947695 DOI: 10.1016/j.jhazmat.2020.123264] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Revised: 06/18/2020] [Accepted: 06/19/2020] [Indexed: 05/19/2023]
Abstract
The purpose of this study was to reveal the absorption and interaction mechanisms of uranium (U) & cadmium (Cd) in corps. Purple sweet potato (Ipomoea batatas L.) was selected as the experimental material. The absorption behavior of U and Cd in this crop and the effects on mineral nutrition were analyzed in a pot experiment. The interactions between U and Cd in purple sweet potato were analyzed using UPLC-MS metabolome analysis. The pot experiment confirmed that the root tuber of the purple sweet potato had accumulated U (1.68-5.16 mg kg-1) and Cd (0.78-2.02 mg kg-1) and would pose a health risk if consumed. Both U and Cd significantly interfered with the mineral nutrient of the roots. Metabolomics revealed that a total of 4865 metabolites were identified in roots. 643 (419 up; 224 down), 526 (332 up; 194 down) and 634 (428 up; 214 down) different metabolites (DEMs) were identified in the U, Cd, and U + Cd exposure groups. Metabolic pathway analysis showed that U and Cd induced the expression of plant hormones (the first messengers) and cyclic nucleotides (cAMP and cGMP, second messengers) in cells and regulated the primary/secondary metabolism of roots to induce resistance to U and Cd toxicity.
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Affiliation(s)
- Jin-Long Lai
- College of Environment and Resources, Southwest University of Science and Technology, Mianyang, 621010, China; School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, China; Engineering Research Center of Biomass Materials, Ministry of Education, Southwest University of Science and Technology, Mianyang, 621010, China
| | - Deng Zhang-Xuan
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, China
| | - J I Xiao-Hui
- College of Environment and Resources, Southwest University of Science and Technology, Mianyang, 621010, China; College of Chemical and Environment Science, Shaanxi University of Technology, Hanzhong, 723000, China
| | - Luo Xue-Gang
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, China; Engineering Research Center of Biomass Materials, Ministry of Education, Southwest University of Science and Technology, Mianyang, 621010, China.
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67
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Zhou X, Xue B, Medina S, Burchiel SW, Liu KJ. Uranium directly interacts with the DNA repair protein poly (ADP-ribose) polymerase 1. Toxicol Appl Pharmacol 2020; 410:115360. [PMID: 33279515 DOI: 10.1016/j.taap.2020.115360] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2020] [Revised: 11/25/2020] [Accepted: 11/28/2020] [Indexed: 11/26/2022]
Abstract
People living in southwest part of United States are exposed to uranium (U) through drinking water, air, and soil. U is radioactive, but independent of this radioactivity also has important toxicological considerations as an environmental metal. At environmentally relevant concentrations, U is both mutagenic and carcinogenic. Emerging evidence shows that U inhibits DNA repair activity, but how U interacts with DNA repair proteins is still largely unknown. Herein, we report that U directly interacts with the DNA repair protein, Protein Poly (ADP-ribose) Polymerase 1 (PARP-1) through direct binding with the zinc finger motif, resulting in zinc release from zinc finger and DNA binding activity loss of the protein. At the peptide level, instead of direct competition with zinc ion in the zinc finger motif, U does not show thermodynamic advantages over zinc. Furthermore, zinc pre-occupied PARP-1 zinc finger is insensitive to U treatment, but U bound to PARP-1 zinc finger can be partially replaced by zinc. These results provide mechanistic basis on molecular level to U inhibition of DNA repair.
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Affiliation(s)
- Xixi Zhou
- Department of Pharmaceutical Sciences, The University of New Mexico College of Pharmacy, Albuquerque, NM, USA
| | - Bingye Xue
- Department of Pharmaceutical Sciences, The University of New Mexico College of Pharmacy, Albuquerque, NM, USA
| | - Sebastian Medina
- Department of Pharmaceutical Sciences, The University of New Mexico College of Pharmacy, Albuquerque, NM, USA; New Mexico Highlands University, Department of Biology, Las Vegas, NM 87701, United States
| | - Scott W Burchiel
- Department of Pharmaceutical Sciences, The University of New Mexico College of Pharmacy, Albuquerque, NM, USA
| | - Ke Jian Liu
- Department of Pharmaceutical Sciences, The University of New Mexico College of Pharmacy, Albuquerque, NM, USA.
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68
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Ma M, Wang R, Xu L, Xu M, Liu S. Emerging health risks and underlying toxicological mechanisms of uranium contamination: Lessons from the past two decades. ENVIRONMENT INTERNATIONAL 2020; 145:106107. [PMID: 32932066 DOI: 10.1016/j.envint.2020.106107] [Citation(s) in RCA: 94] [Impact Index Per Article: 23.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Revised: 08/28/2020] [Accepted: 08/30/2020] [Indexed: 06/11/2023]
Abstract
Uranium contamination is a global health concern. Regarding natural or anthropogenic uranium contamination, the major sources of concern are groundwater, mining, phosphate fertilizers, nuclear facilities, and military activities. Many epidemiological and laboratory studies have demonstrated that environmental and occupational uranium exposure can induce multifarious health problems. Uranium exposure may cause health risks because of its chemotoxicity and radiotoxicity in natural or anthropogenic scenarios: the former is generally thought to play a more significant role with regard to the natural uranium exposure, and the latter is more relevant to enriched uranium exposure. The understanding of the health risks and underlying toxicological mechanisms of uranium remains at a preliminary stage, and many controversial findings require further research. In order to present state-of-the-art status in this field, this review will primarily focus on the chemotoxicity of uranium, rather than its radiotoxicity, as well as the involved toxicological mechanisms. First, the natural or anthropogenic uranium contamination scenarios will be briefly summarized. Second, the health risks upon natural uranium exposure, for example, nephrotoxicity, bone toxicity, reproductive toxicity, hepatotoxicity, neurotoxicity, and pulmonary toxicity, will be discussed based on the reported epidemiological cases and laboratory studies. Third, the recent advances regarding the toxicological mechanisms of uranium-induced chemotoxicity will be highlighted, including oxidative stress, genetic damage, protein impairment, inflammation, and metabolic disorder. Finally, the gaps and challenges in the knowledge of uranium-induced chemotoxicity and underlying mechanisms will be discussed.
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Affiliation(s)
- Minghao Ma
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ruixia Wang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Lining Xu
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ming Xu
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; School of Environment, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou 310024, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Sijin Liu
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
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69
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Fernandes S, Nogueira V, Lourenço J, Mendo S, Pereira R. Inter-species bystander effect: Eisenia fetida and Enchytraeus albidus exposed to uranium and cadmium. JOURNAL OF HAZARDOUS MATERIALS 2020; 399:122972. [PMID: 32526440 DOI: 10.1016/j.jhazmat.2020.122972] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Revised: 05/14/2020] [Accepted: 05/16/2020] [Indexed: 06/11/2023]
Abstract
The bystander effect is commonly defined as the observation of effects in nonirradiated cells and tissues when the later are in contact with irradiated cells/ tissues. More recently the occurrence of bystander effect between organisms of the same species has been also demonstrated. Nevertheless, there is limited knowledge about this effect between soil dwelling organisms from different taxonomic groups, as well as in response to stressors other than ionizing radiation. Moreover, data reporting this phenomenon for soil invertebrates are scarce. The results herein presented contribute for the understanding of the impacts of cadmium and uranium in the DNA integrity of two terrestrial oligochaetes species (Eisenia fetida and Enchytraeus albidus). The evaluation was based on the quantification of the effects in the DNA integrity of the coelomocytes using the alkaline comet assay technique. This work reports the existence of bystander signaling from terrestrial earthworms to enchytraeids and from enchytraeids to earthworms when the organisms were exposed to Cd. These results reinforce that the bystander effect seems to be related with the genotoxic activity of stressors, and not exclusive of radiotoxic contaminants. Further, the bystander effect occurs between different species and under real environmental conditions, even in complex matrices, as the soil.
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Affiliation(s)
- S Fernandes
- GreenUPorto - Sustainable Agrifood Production Research Center & Department of Biology, Faculty of Science, University of Porto, Rua do Campo Alegre s/n, Porto, Portugal.
| | - V Nogueira
- CIIMAR - Interdisciplinary Centre of Marine and Environmental Research and Department of Biology, Faculty of Science, University of Porto, Rua do Campo Alegre s/n, Porto, Portugal
| | - J Lourenço
- Department of Biology & CESAM, University of Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal
| | - S Mendo
- Department of Biology & CESAM, University of Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal
| | - R Pereira
- GreenUPorto - Sustainable Agrifood Production Research Center & Department of Biology, Faculty of Science, University of Porto, Rua do Campo Alegre s/n, Porto, Portugal
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70
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Zhang Y, Lai JL, Ji XH, Luo XG. Unraveling response mechanism of photosynthetic metabolism and respiratory metabolism to uranium-exposure in Vicia faba. JOURNAL OF HAZARDOUS MATERIALS 2020; 398:122997. [PMID: 32512460 DOI: 10.1016/j.jhazmat.2020.122997] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2019] [Revised: 05/18/2020] [Accepted: 05/18/2020] [Indexed: 05/28/2023]
Abstract
As a natural radionuclide, uranium (U) has obvious phytotoxicity, the purpose of this study is to unravel the response mechanism of U on photosynthetic and respiratory metabolism in plants. Therefore, 14-day-old Vicia faba seedlings were exposed to 0-25 μM U during 72 h. U effects on growth parameters, physiological parameters of plants, and potential phytotoxicity mechanism were investigated by physiological analysis, and metabolome and transcriptome data. U significantly inhibited photosynthesis and respiration of plants. In metabolome analysis, 53 metabolites related to carbohydrate metabolism were identified (13 up-regulated, 12 down-regulated). In transcriptome analysis, U significantly inhibited the expression of photoreactive electron transport chain (up: 0; down: 31), Calvin cycle (up: 0; down: 12) and photorespiration pathway genes (up: 0; down: 8). U significantly inhibited the expression of cellular energy metabolic pathways genes (e.g., glycolysis, TCA cycle, and oxidative phosphorylation pathways) (up 8, down 18). We concluded that U inhibited the expression of genes involved in the photosynthetic metabolic pathway, which caused the decrease of photosynthetic rate. Meanwhile, U inhibited the expression of the electron transport chain genes in the mitochondrial oxidative phosphorylation pathway, which leads to the abnormal energy supply of cells and the inhibition of root respiration rate.
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Affiliation(s)
- Yu Zhang
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, China
| | - Jin-Long Lai
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, China; College of Environment and Resources, Southwest University of Science and Technology, Mianyang, 621010, China.
| | - Xiao-Hui Ji
- College of Chemical and Environment Science, Shaanxi University of Technology, Hanzhong, 723000, China; College of Environment and Resources, Southwest University of Science and Technology, Mianyang, 621010, China
| | - Xue-Gang Luo
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, China; Engineering Research Center of Biomass Materials, Ministry of Education, Southwest University of Science and Technology, Mianyang, 621010, China.
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71
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Zhou W, Xian D, Su X, Li Y, Que W, Shi Y, Wang J, Liu C. Macroscopic and spectroscopic characterization of U(VI) sorption on biotite. CHEMOSPHERE 2020; 255:126942. [PMID: 32387732 DOI: 10.1016/j.chemosphere.2020.126942] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Revised: 04/28/2020] [Accepted: 04/29/2020] [Indexed: 06/11/2023]
Abstract
Knowledge of the geochemical behavior of uranium is critical for the safe disposal of radioactive wastes. Biotite, a Fe(II)-rich phyllosilicate, is a common rock-forming mineral and a major component of granite or granodiorite. This work comprehensively studied the sorption of U(VI) on biotite surface with batch experiments and analyzed the uranium speciation with various spectroscopic techniques, including X-ray diffraction (XRD), X-ray photoelectron spectroscopy (XPS), transmission electron microscopy (TEM) and time-resolved fluorescence spectra (TRFS). Our results indicated that uranyl ions could penetrate into the interlayer of biotite, this ion-exchange process was pH-dependent and only favorable under acidic condition. Instead of precipitation or reduction to uraninite, the TRFS results strongly suggests U(VI) forms surface complexes under the neutral and alkaline condition, though the number and structure of surface species could not be identified accurately. Besides, the oxidation of biotite with peroxide hydrogen showed that structural Fe(II) would have a very low redox reactivity. With leaching experiments, zeta potential analysis and thermodynamics calculation, we discussed the possible reasons for inhibition of U(VI) reduction at the biotite-water interface. Our results may provide insight on interaction mechanism of uranium at mineral-water interface and help us understand the migration behavior of uranium in natural environments.
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Affiliation(s)
- Wanqiang Zhou
- Beijing National Laboratory for Molecular Sciences, Fundamental Science Laboratory on Radiochemistry and Radiation Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Dongfan Xian
- Beijing National Laboratory for Molecular Sciences, Fundamental Science Laboratory on Radiochemistry and Radiation Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Xuebin Su
- Beijing Research Institute of Chemical Engineering and Metallurgy, CNNC, Beijing, 101149, China
| | - Yao Li
- Beijing National Laboratory for Molecular Sciences, Fundamental Science Laboratory on Radiochemistry and Radiation Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Weimin Que
- Beijing Research Institute of Chemical Engineering and Metallurgy, CNNC, Beijing, 101149, China
| | - Yanlin Shi
- Beijing National Laboratory for Molecular Sciences, Fundamental Science Laboratory on Radiochemistry and Radiation Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Jingyi Wang
- Beijing National Laboratory for Molecular Sciences, Fundamental Science Laboratory on Radiochemistry and Radiation Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Chunli Liu
- Beijing National Laboratory for Molecular Sciences, Fundamental Science Laboratory on Radiochemistry and Radiation Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China.
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72
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Wang Q, Li T, Huang X, Yang G. Redox mechanism and stability of uranyl phosphites at mineral surfaces: Cooperative proton/electron transfer and high efficacy for Uranium(VI) reduction. CHEMOSPHERE 2020; 255:126948. [PMID: 32387733 DOI: 10.1016/j.chemosphere.2020.126948] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2020] [Revised: 04/21/2020] [Accepted: 04/29/2020] [Indexed: 06/11/2023]
Abstract
Uranium phosphites have recently emerged as promising materials to remediate radioactive contamination. In this study, the redox mechanisms of uranyl phosphites at mineral surfaces have been addressed by periodic DFT calculations with dispersion corrections. Different from other ligands, the phosphite anions (H2PO3-, HPO32-) are efficient reducing agents for uranyl reduction, and the redox reactions are divided into three steps, as isomerization between two phosphite anion isomers (Step 1), conformational transition (Step 2) and dissociation of the water molecule (Step 3). A second water molecule is critical to lower the activation barriers of Step 1, and all activation barriers are moderate so that the redox reactions occur favorably under normal conditions, which are further dramatically accelerated by the highly exergonic Step 3. Accordingly, formation of uranyl phosphites becomes an effective approach to manage uranium pollution. Moreover, the lower activation barriers for H2PO3- rather than HPO32- rationalize the superior reduction activities of uranyl phosphites and the enhanced stability of U(IV) products at lower pH conditions. Owing to the cooperative proton/electron transfer, the U(VI) reduction to U(IV) and P(III) oxidation to P(V) are completed within one step, with transition states being featured by the U(V) and P(IV) species.
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Affiliation(s)
- Qian Wang
- College of Resources and Environment & Chongqing Key Laboratory of Soil Multi-scale Interfacial Process, Southwest University, Chongqing, 400715, China
| | - Tingting Li
- College of Resources and Environment & Chongqing Key Laboratory of Soil Multi-scale Interfacial Process, Southwest University, Chongqing, 400715, China
| | - Xiaoxiao Huang
- College of Resources and Environment & Chongqing Key Laboratory of Soil Multi-scale Interfacial Process, Southwest University, Chongqing, 400715, China
| | - Gang Yang
- College of Resources and Environment & Chongqing Key Laboratory of Soil Multi-scale Interfacial Process, Southwest University, Chongqing, 400715, China.
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73
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Wang B, Li Y, Zheng J, Hu Y, Wang X, Hu B. Efficient removal of U(VI) from aqueous solutions using the magnetic biochar derived from the biomass of a bloom-forming cyanobacterium (Microcystis aeruginosa). CHEMOSPHERE 2020; 254:126898. [PMID: 32957293 DOI: 10.1016/j.chemosphere.2020.126898] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Revised: 04/22/2020] [Accepted: 04/24/2020] [Indexed: 06/11/2023]
Abstract
The utilization of Microcystis biomass is an urgent issue in the mitigation of cyanobacterial bloom. In this study, Microcystis-derived biochar (MB) and Fe3O4-modified biochar (Fe3O4/MB) were fabricated for the U(VI) elimination. The results showed that U(VI) sorption process by either MB or Fe3O4/MB was pH-dependent and ionic strength-independent. The maximum sorption capacity of MB was higher than that of Fe3O4/MB. According to the analysis of X-ray photoelectron spectroscopy, U(VI) sorption on both MB and Fe3O4/MB was mainly ascribed to the surface complexation between U(VI) and oxygen-containing functional groups on the surface of MB. Fe3O4 particles on the surface of MB didn't provide extra active sites for the sorption of U(VI), but it enabled the adsorbent to be magnetically separated. Five consecutive sorption/desorption cycles verified the good reusability of Fe3O4/MB in this study. Therefore, the investigation is not only meaningful for the utilization of nuisance biomass from cyanobacterial blooms, but also provides novel adsorbents for the U(VI) removal from aqueous solutions.
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Affiliation(s)
- Binliang Wang
- School of Life Science, Shaoxing University, Huancheng West Road 508, Shaoxing, 312000, PR China
| | - Yingying Li
- School of Life Science, Shaoxing University, Huancheng West Road 508, Shaoxing, 312000, PR China
| | - Junli Zheng
- School of Life Science, Shaoxing University, Huancheng West Road 508, Shaoxing, 312000, PR China
| | - Yiwei Hu
- School of Life Science, Shaoxing University, Huancheng West Road 508, Shaoxing, 312000, PR China
| | - Xiaojun Wang
- Department of Mathematics, Shaoxing University, Huancheng West Road 508, Shaoxing, 312000, PR China.
| | - Baowei Hu
- School of Life Science, Shaoxing University, Huancheng West Road 508, Shaoxing, 312000, PR China.
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74
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Lin YW. Uranyl Binding to Proteins and Structural-Functional Impacts. Biomolecules 2020; 10:biom10030457. [PMID: 32187982 PMCID: PMC7175365 DOI: 10.3390/biom10030457] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2020] [Revised: 03/08/2020] [Accepted: 03/13/2020] [Indexed: 01/29/2023] Open
Abstract
The widespread use of uranium for civilian purposes causes a worldwide concern of its threat to human health due to the long-lived radioactivity of uranium and the high toxicity of uranyl ion (UO22+). Although uranyl–protein/DNA interactions have been known for decades, fewer advances are made in understanding their structural-functional impacts. Instead of focusing only on the structural information, this article aims to review the recent advances in understanding the binding of uranyl to proteins in either potential, native, or artificial metal-binding sites, and the structural-functional impacts of uranyl–protein interactions, such as inducing conformational changes and disrupting protein-protein/DNA/ligand interactions. Photo-induced protein/DNA cleavages, as well as other impacts, are also highlighted. These advances shed light on the structure-function relationship of proteins, especially for metalloproteins, as impacted by uranyl–protein interactions. It is desired to seek approaches for biological remediation of uranyl ions, and ultimately make a full use of the double-edged sword of uranium.
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Affiliation(s)
- Ying-Wu Lin
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China; ; Tel.: +86-734-8578079
- Laboratory of Protein Structure and Function, University of South China, Hengyang 421001, China
- Hunan Key Laboratory for the Design and Application of Actinide Complexes, University of South China, Hengyang 421001, China
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Bjørklund G, Semenova Y, Pivina L, Dadar M, Rahman MM, Aaseth J, Chirumbolo S. Uranium in drinking water: a public health threat. Arch Toxicol 2020; 94:1551-1560. [DOI: 10.1007/s00204-020-02676-8] [Citation(s) in RCA: 54] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2019] [Accepted: 02/11/2020] [Indexed: 12/31/2022]
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Sarthou MCM, Revel BH, Villiers F, Alban C, Bonnot T, Gigarel O, Boisson AM, Ravanel S, Bourguignon J. Development of a metalloproteomic approach to analyse the response of Arabidopsis cells to uranium stress. Metallomics 2020; 12:1302-1313. [DOI: 10.1039/d0mt00092b] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Elaboration of a top-down proteomic, biochemical and ionoproteomic toolbox to gain insights into the impact of uranyl (U) on Arabidopsis cells.
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