51
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Ishii Y, Tycko R. Multidimensional Heteronuclear Correlation Spectroscopy of a Uniformly 15N- and 13C-Labeled Peptide Crystal: Toward Spectral Resolution, Assignment, and Structure Determination of Oriented Molecules in Solid-State NMR. J Am Chem Soc 2000. [DOI: 10.1021/ja9915753] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yoshitaka Ishii
- Contribution from the Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-0520
| | - Robert Tycko
- Contribution from the Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-0520
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52
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Taylor DM, Ramamoorthy A. Analysis of dipolar-coupling-mediated coherence transfer in a homonuclear two spin-12 solid-state system. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 1999; 141:18-28. [PMID: 10527739 DOI: 10.1006/jmre.1999.1893] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Homonuclear dipolar-mediated coherence transfer (DCT), a through-space transfer of magnetization between like spins, can yield otherwise difficult-to-obtain structural information for macromolecules by measuring the internuclear distances between two sites of interest. The behavior of a spin-12 system under DCT is analyzed in detail by computing the time development of the density matrix using the product operator formalism. The effect of coherence transfer (CT) via the homonuclear isotropic scalar coupling on DCT is examined. Analytical and computational results that yield useful information on the frequencies, first-maxima, and first-zero of CT for a uniaxially oriented or a single-crystal solid-state system are presented. The results predict that the evolution of the spin angular momentum operators under the homonuclear dipolar coupling Hamiltonian leads to "cylindrical mixing" unlike "isotropic mixing" due to the strong scalar coupling Hamiltonian. These results will find relevance in both the design of RF pulse sequences for the structural studies of uniaxially oriented biological solids and the interpretation of solution NMR results from proteins embedded in partially oriented bicelles. Copyright 1999 Academic Press.
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Affiliation(s)
- DM Taylor
- Biophysics Research Division, The University of Michigan, Ann Arbor, Michigan, 48109-1055, USA
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53
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Tycko R, Berger AE. Dual processing of two-dimensional exchange data in magic angle spinning NMR of solids. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 1999; 141:141-147. [PMID: 10527751 DOI: 10.1006/jmre.1999.1877] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
We discuss procedures for processing data in rotor-synchronized two-dimensional magic angle spinning (2D MAS) NMR exchange measurements for both structural and dynamical studies. We show, both mathematically and experimentally, that there are two distinct data processing procedures that lead to 2D MAS exchange spectra with purely absorptive crosspeaks. One procedure is that described previously by Hagemeyer, Schmidt-Rohr, and Spiess (HSS). The other procedure is related, but different, and leads to crosspeak intensities given by the formulae of Herzfeld, Roberts, and Griffin (HRG). In 2D MAS exchange experiments on doubly (13)C-labeled l-alanylglycylglycine, we demonstrate that the HSS and HRG crosspeak intensities can be extracted separately from the same data set and contain independent information. Processing and analysis of 2D MAS exchange data with both the HSS and the HRG procedures may enhance utilization of the information content of 2D MAS exchange measurements.
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Affiliation(s)
- R Tycko
- National Institute of Diabetes and Digestive and Kidney Diseases, Bethesda, Maryland 20892-0520, USA
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54
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Nishimura K, Naito A, Tuzi S, Saitô H. Analysis of Dipolar Dephasing Pattern in I−Sn Multispin System for Obtaining the Information of Molecular Packing and Its Application to Crystalline N-Acetyl-Pro-Gly-Phe by REDOR Solid State NMR. J Phys Chem B 1999. [DOI: 10.1021/jp9917502] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Katsuyuki Nishimura
- Department of Life Science, Faculty of Science, Himeji Institute of Technology, Harima Science Garden City, Kamigori, Hyogo, 678-1297, Japan
| | - Akira Naito
- Department of Life Science, Faculty of Science, Himeji Institute of Technology, Harima Science Garden City, Kamigori, Hyogo, 678-1297, Japan
| | - Satoru Tuzi
- Department of Life Science, Faculty of Science, Himeji Institute of Technology, Harima Science Garden City, Kamigori, Hyogo, 678-1297, Japan
| | - Hazime Saitô
- Department of Life Science, Faculty of Science, Himeji Institute of Technology, Harima Science Garden City, Kamigori, Hyogo, 678-1297, Japan
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55
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Bower PV, Oyler N, Mehta MA, Long JR, Stayton PS, Drobny GP. Determination of Torsion Angles in Proteins and Peptides Using Solid State NMR. J Am Chem Soc 1999. [DOI: 10.1021/ja991330q] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Peter V. Bower
- Contribution from the Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, and Department of Bioengineering, University of Washington, Seattle, Washington 98195-1700
| | - Nathan Oyler
- Contribution from the Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, and Department of Bioengineering, University of Washington, Seattle, Washington 98195-1700
| | - Manish A. Mehta
- Contribution from the Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, and Department of Bioengineering, University of Washington, Seattle, Washington 98195-1700
| | - Joanna R. Long
- Contribution from the Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, and Department of Bioengineering, University of Washington, Seattle, Washington 98195-1700
| | - Patrick S. Stayton
- Contribution from the Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, and Department of Bioengineering, University of Washington, Seattle, Washington 98195-1700
| | - Gary. P. Drobny
- Contribution from the Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, and Department of Bioengineering, University of Washington, Seattle, Washington 98195-1700
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56
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Fu R, Cross TA. Solid-state nuclear magnetic resonance investigation of protein and polypeptide structure. ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE 1999; 28:235-68. [PMID: 10410802 DOI: 10.1146/annurev.biophys.28.1.235] [Citation(s) in RCA: 77] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Solid-state nuclear magnetic resonance (NMR) is rapidly emerging as a successful and important technique for protein and peptide structural elucidation from samples in anisotropic environments. Because of the diversity of nuclei and nuclear spin interactions that can be observed, and because of the broad range of sample conditions that can be studied by solid-state NMR, the potential for gaining structural constraints is great. Structural constraints in the form of orientational, distance, and torsional constraints can be obtained on proteins in crystalline, liquid-crystalline, or amorphous preparations. Great progress in the past few years has been made in developing techniques for obtaining these constraints, and now it has also been clearly demonstrated that these constraints can be assembled into uniquely defined three-dimensional structures at high resolution. Although much progress toward the development of solid-state NMR as a routine structural tool has been documented, the future is even brighter with the continued development of the experiments, of NMR hardware, and of the molecular biological methods for the preparation of labeled samples.
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Affiliation(s)
- R Fu
- Center for Interdisciplinary Magnetic Resonance, Florida State University, Tallahassee 32310, USA.
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57
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Hartmann P, Jäger C, Zwanziger JW. Off-angle correlation spectroscopy applied to spin-1/2 and quadrupolar nuclei. SOLID STATE NUCLEAR MAGNETIC RESONANCE 1999; 13:245-254. [PMID: 10378433 DOI: 10.1016/s0926-2040(99)00003-x] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
A two-dimensional correlation experiment is described, in which homonuclear dipolar couplings are used to realize through-space magnetization exchange on spin-1/2 (31P) and on quadrupolar nuclei (23Na and 11B). In the detection period, Magic Angle Spinning is applied to enhance resolution, and the dipole couplings are re-introduced in the mixing period by spinning off the Magic Angle. The dependency of the exchange rates on the mixing time and the spinning angle is investigated. The influence of strong spin-locking during mixing is discussed, and shown in the spin-1/2 case to remove the dependence on chemical shift offset effects. For quadrupolar spins, the experiment yields information on the relative tensor orientations of the coupled quadrupoles. Applications to crystalline sodium aluminum diphosphate, sodium sulphite, and potassium borate glasses are shown.
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Affiliation(s)
- P Hartmann
- Friedrich-Schiller-Universität Jena, Germany
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58
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Nomura K, Takegoshi K, Terao T, Uchida K, Kainosho M. Determination of the Complete Structure of a Uniformly Labeled Molecule by Rotational Resonance Solid-State NMR in the Tilted Rotating Frame. J Am Chem Soc 1999. [DOI: 10.1021/ja984330j] [Citation(s) in RCA: 69] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Kaoru Nomura
- Department of Chemistry, Graduate School of Science Kyoto University, Kyoto 606-8502, Japan Department of Biosciences School of Science and Engineering, Teikyo University Utsunomiya 320-8551, Japan Department of Chemistry, Graduate School of Science Tokyo Metropolitan University, Hachioji, Tokyo 192-0397, Japan
| | - K. Takegoshi
- Department of Chemistry, Graduate School of Science Kyoto University, Kyoto 606-8502, Japan Department of Biosciences School of Science and Engineering, Teikyo University Utsunomiya 320-8551, Japan Department of Chemistry, Graduate School of Science Tokyo Metropolitan University, Hachioji, Tokyo 192-0397, Japan
| | - Takehiko Terao
- Department of Chemistry, Graduate School of Science Kyoto University, Kyoto 606-8502, Japan Department of Biosciences School of Science and Engineering, Teikyo University Utsunomiya 320-8551, Japan Department of Chemistry, Graduate School of Science Tokyo Metropolitan University, Hachioji, Tokyo 192-0397, Japan
| | - Kenichi Uchida
- Department of Chemistry, Graduate School of Science Kyoto University, Kyoto 606-8502, Japan Department of Biosciences School of Science and Engineering, Teikyo University Utsunomiya 320-8551, Japan Department of Chemistry, Graduate School of Science Tokyo Metropolitan University, Hachioji, Tokyo 192-0397, Japan
| | - Masatsune Kainosho
- Department of Chemistry, Graduate School of Science Kyoto University, Kyoto 606-8502, Japan Department of Biosciences School of Science and Engineering, Teikyo University Utsunomiya 320-8551, Japan Department of Chemistry, Graduate School of Science Tokyo Metropolitan University, Hachioji, Tokyo 192-0397, Japan
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59
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GAN ZHEHONG, ROBYR PIERRE. Deuterium polarization transfer in rotating solids and its application in structural investigation. Mol Phys 1998. [DOI: 10.1080/00268979809483246] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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60
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Gregory DM, Benzinger TL, Burkoth TS, Miller-Auer H, Lynn DG, Meredith SC, Botto RE. Dipolar recoupling NMR of biomolecular self-assemblies: determining inter- and intrastrand distances in fibrilized Alzheimer's beta-amyloid peptide. SOLID STATE NUCLEAR MAGNETIC RESONANCE 1998; 13:149-166. [PMID: 10023844 DOI: 10.1016/s0926-2040(98)00086-1] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
We demonstrate a new method for investigating the structure of self-associating biopolymers using dipolar recoupling NMR techniques. This approach was applied to the study of fibrillar beta-amyloid (Abeta) peptides (the primary component of the plaques of Alzheimer's disease) containing only a single isotopic spin label (13C), by employing the DRAWS (dipolar recoupling with a windowless sequence) technique to measure 13C-13C distances. The 'single-label' approach simplified analysis of DRAWS data, since only interstrand contacts are present, without the possibility of any intrastrand contacts. As previously reported [T.L.S. Benzinger, D.M. Gregory, T.S. Burkoth, H. Miller-Auer, D.G. Lynn, R.E. Botto, S.C. Meredith, Proc. Natl. Acad. Sci. 95 (1998) 13407.], contacts of approximately 5 A were observed at all residues studied, consistent with an extended parallel beta-sheet structure with each amino acid in exact register. Here, we propose that our strategy is completely generalizable, and provides a new approach for characterizing any iterative, self-associating biopolymer. Towards the end of generalizing and refining our approach, in this paper we evaluate several issues raised by our previous analyses. First, we consider the effects of double-quantum (DQ) transverse relaxation processes. Next, we discuss the effects of various multiple-spin geometries on modeling of DRAWS data. Several practical issues are also discussed: these include (1) the use of DQ filtering experiments, either to corroborate DRAWS data, or as a rapid screening assessment of the proper placement of isotopic spin labels; and (2) the comparison of solid samples prepared by either lyophilization or freezing. Finally, data obtained from the use of single labels is compared with that obtained in doubly 13C-labeled model compounds of known crystal structure. It is shown that such data are obtainable in far more complex peptide molecules. These data,taken together, refine the DRAWS method, and demonstrate its precision and utility in obtaining high resolution structural data in complex biomolecular aggregates such as Abeta.
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Affiliation(s)
- D M Gregory
- Chemistry Division, Argonne National Laboratory, IL 60439, USA
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61
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Benzinger TL, Gregory DM, Burkoth TS, Miller-Auer H, Lynn DG, Botto RE, Meredith SC. Propagating structure of Alzheimer's beta-amyloid(10-35) is parallel beta-sheet with residues in exact register. Proc Natl Acad Sci U S A 1998; 95:13407-12. [PMID: 9811813 PMCID: PMC24832 DOI: 10.1073/pnas.95.23.13407] [Citation(s) in RCA: 346] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/1998] [Accepted: 08/17/1998] [Indexed: 11/18/2022] Open
Abstract
The pathognomonic plaques of Alzheimer's disease are composed primarily of the 39- to 43-aa beta-amyloid (Abeta) peptide. Crosslinking of Abeta peptides by tissue transglutaminase (tTg) indicates that Gln15 of one peptide is proximate to Lys16 of another in aggregated Abeta. Here we report how the fibril structure is resolved by mapping interstrand distances in this core region of the Abeta peptide chain with solid-state NMR. Isotopic substitution provides the source points for measuring distances in aggregated Abeta. Peptides containing a single carbonyl 13C label at Gln15, Lys16, Leu17, or Val18 were synthesized and evaluated by NMR dipolar recoupling methods for the measurement of interpeptide distances to a resolution of 0.2 A. Analysis of these data establish that this central core of Abeta consists of a parallel beta-sheet structure in which identical residues on adjacent chains are aligned directly, i. e., in register. Our data, in conjunction with existing structural data, establish that the Abeta fibril is a hydrogen-bonded, parallel beta-sheet defining the long axis of the Abeta fibril propagation.
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Affiliation(s)
- T L Benzinger
- Department of Pathology, University of Chicago, Chicago, IL 60637, USA
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62
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Hong M, Gross JD, Hu W, Griffin RG. Determination of the peptide torsion angle phi by 15N chemical shift and 13Calpha-1Halpha dipolar tensor correlation in solid-state MAS NMR. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 1998; 135:169-177. [PMID: 9799691 DOI: 10.1006/jmre.1998.1573] [Citation(s) in RCA: 45] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
We demonstrate a dipolar-chemical shift correlation technique for sign-sensitive determination of the torsion angle phi in solid peptides and proteins under magic-angle spinning. The indirect dimension of the experiment is obtained by separate but synchronous evolution of the magnetization under the 15N chemical shift and the C-H dipolar coupling. The resulting sum and difference spectrum of the two frequencies, with more than ten independent sidebands, depends strongly on the relative orientation of the 15N chemical shift tensor and the Calpha-Halpha bond. This relative orientation reflects the C(O)i-1-N-Calpha-C(O)i torsion angle. The technique can distinguish phi angles over the full range of 360 degrees when the amide 15N chemical shift tensor does not possess reflection symmetry with respect to the peptide plane. Thus it complements our previous HNCH experiment, in which two mirror-symmetric conformers of the HN-N bond relative to the Calpha-Halpha bond around the N-Calpha axis cannot be distinguished.
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Affiliation(s)
- M Hong
- Francis Bitter Magnet Laboratory and Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts, 02139, USA
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63
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Rienstra CM, Hatcher ME, Mueller LJ, Sun, Fesik SW, Griffin RG. Efficient Multispin Homonuclear Double-Quantum Recoupling for Magic-Angle Spinning NMR: 13C−13C Correlation Spectroscopy of U-13C-Erythromycin A. J Am Chem Soc 1998. [DOI: 10.1021/ja9810181] [Citation(s) in RCA: 119] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Chad M. Rienstra
- Department of Chemistry and Center for Magnetic Resonance, Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, Department of Chemistry, Brandeis University, Waltham, Massachusetts 02254, and Abbott Laboratories, Abbott Park, Illinois 60064
| | - Mary E. Hatcher
- Department of Chemistry and Center for Magnetic Resonance, Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, Department of Chemistry, Brandeis University, Waltham, Massachusetts 02254, and Abbott Laboratories, Abbott Park, Illinois 60064
| | - Leonard J. Mueller
- Department of Chemistry and Center for Magnetic Resonance, Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, Department of Chemistry, Brandeis University, Waltham, Massachusetts 02254, and Abbott Laboratories, Abbott Park, Illinois 60064
| | - Sun
- Department of Chemistry and Center for Magnetic Resonance, Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, Department of Chemistry, Brandeis University, Waltham, Massachusetts 02254, and Abbott Laboratories, Abbott Park, Illinois 60064
| | - Stephen W. Fesik
- Department of Chemistry and Center for Magnetic Resonance, Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, Department of Chemistry, Brandeis University, Waltham, Massachusetts 02254, and Abbott Laboratories, Abbott Park, Illinois 60064
| | - Robert G. Griffin
- Department of Chemistry and Center for Magnetic Resonance, Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, Department of Chemistry, Brandeis University, Waltham, Massachusetts 02254, and Abbott Laboratories, Abbott Park, Illinois 60064
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64
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Nishimura K, Naito A, Tuzi S, Saitô H, Hashimoto C, Aida M. Determination of the Three-Dimensional Structure of Crystalline Leu-Enkephalin Dihydrate Based on Six Sets of Accurately Determined Interatomic Distances from 13C-REDOR NMR and the Conformation-Dependent 13C Chemical Shifts. J Phys Chem B 1998. [DOI: 10.1021/jp981683w] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Katsuyuki Nishimura
- Department of Life Science, Himeji Institute of Technology, Harima Science Garden City, Kamigori, Hyogo 678-1297, Japan
| | - Akira Naito
- Department of Life Science, Himeji Institute of Technology, Harima Science Garden City, Kamigori, Hyogo 678-1297, Japan
| | - Satoru Tuzi
- Department of Life Science, Himeji Institute of Technology, Harima Science Garden City, Kamigori, Hyogo 678-1297, Japan
| | - Hazime Saitô
- Department of Life Science, Himeji Institute of Technology, Harima Science Garden City, Kamigori, Hyogo 678-1297, Japan
| | - Chikao Hashimoto
- Department of Chemistry, The Jikei University School of Medicine, Kokuryo-cho, Chofu-shi, Tokyo 182-0022, Japan
| | - Misako Aida
- Biophysics Division, National Cancer Center Research Institute, Tukiji 5-chome, Chuo-ku, Tokyo 104-0045, Japan
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65
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Iuliucci RJ, Meier BH. A Characterization of the Linear P−O−P Bonds in M4+(P2O7) Compounds: Bond-Angle Determination by Solid-State NMR. J Am Chem Soc 1998. [DOI: 10.1021/ja980594u] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Robbie J. Iuliucci
- Contribution from the NSR-Center for Molecular Structure, Design and Synthesis, Laboratory of Physical Chemistry, University of Nijmegen, Toernooiveld 6525 ED Nijmegen, The Netherlands
| | - Beat H. Meier
- Contribution from the NSR-Center for Molecular Structure, Design and Synthesis, Laboratory of Physical Chemistry, University of Nijmegen, Toernooiveld 6525 ED Nijmegen, The Netherlands
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66
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Fujiwara T, Shimomura T, Ohigashi Y, Akutsu H. Multidimensional solid-state nuclear magnetic resonance for determining the dihedral angle from the correlation of 13C–1H and 13C–13C dipolar interactions under magic-angle spinning conditions. J Chem Phys 1998. [DOI: 10.1063/1.476806] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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67
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Long HW, Tycko R. Biopolymer Conformational Distributions from Solid-State NMR: α-Helix and 310-Helix Contents of a Helical Peptide. J Am Chem Soc 1998. [DOI: 10.1021/ja974277j] [Citation(s) in RCA: 70] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Henry W. Long
- Contribution from the Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-0520
| | - Robert Tycko
- Contribution from the Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-0520
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68
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Griffin RG. Dipolar recoupling in MAS spectra of biological solids. NATURE STRUCTURAL BIOLOGY 1998; 5 Suppl:508-12. [PMID: 9665180 DOI: 10.1038/749] [Citation(s) in RCA: 298] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
In combination with magic angle spinning, dipolar recoupling yields solid state NMR spectral assignments and provides constraints on internuclear distances and torsion angles. The method offers a fresh approach to structural studies of a variety of systems that cannot be examined with conventional tools available to structural biology.
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Affiliation(s)
- R G Griffin
- Francis Bitter Magnet Laboratory and Department of Chemistry, Massachusetts Institute of Technology, Cambridge 02139-4507, USA.
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69
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Hong M, Griffin RG. Resonance Assignments for Solid Peptides by Dipolar-Mediated 13C/15N Correlation Solid-State NMR. J Am Chem Soc 1998. [DOI: 10.1021/ja980775w] [Citation(s) in RCA: 111] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mei Hong
- Francis Bitter Magnet Laboratory and Department of Chemistry Massachusetts Institute of Technology Cambridge, Massachusetts 02139
| | - Robert G. Griffin
- Francis Bitter Magnet Laboratory and Department of Chemistry Massachusetts Institute of Technology Cambridge, Massachusetts 02139
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70
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Gan Z, Ernst RR. Three-dimensional nuclear magnetic resonance exchange spectroscopy with rotary resonance in rotating solids: Application to tropolone dynamics. J Chem Phys 1998. [DOI: 10.1063/1.476395] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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71
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Bennett AE, Weliky DP, Tycko R. Quantitative Conformational Measurements in Solid State NMR by Constant-Time Homonuclear Dipolar Recoupling. J Am Chem Soc 1998. [DOI: 10.1021/ja980191u] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Andrew E. Bennett
- Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases National Institutes of Health Bethesda, Maryland 20892-0520
| | - David P. Weliky
- Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases National Institutes of Health Bethesda, Maryland 20892-0520
| | - Robert Tycko
- Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases National Institutes of Health Bethesda, Maryland 20892-0520
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72
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McGeorge G, Harris RK, Batsanov AS, Churakov AV, Chippendale AM, Bullock JF, Gan Z. Analysis of a Solid-State Conformational Rearrangement Using 15N NMR and X-ray Crystallography. J Phys Chem A 1998. [DOI: 10.1021/jp980543j] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Gary McGeorge
- Department of Chemistry, University of Durham, South Road, Durham DH1 3LE, U.K
| | - Robin K. Harris
- Department of Chemistry, University of Durham, South Road, Durham DH1 3LE, U.K
| | - Andrei S. Batsanov
- Department of Chemistry, University of Durham, South Road, Durham DH1 3LE, U.K
| | - Andrei V. Churakov
- Department of Chemistry, University of Durham, South Road, Durham DH1 3LE, U.K
| | - A. Margaret Chippendale
- Zeneca Specialties Research Centre, PO Box 42, Hexagon House, Blackley, Manchester M9 8ZS, U.K
| | - James F. Bullock
- BASF plc Textile Colours Research, PO Box 4, Earl Road, Cheadle Hulme, Cheshire SK8 6QG, U.K
| | - Zhehong Gan
- Laboratorium für Physikalische Chemie, Eidgenössische Technische Hochschule, CH-8092 Zürich, Switzerland
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73
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Robyr P, Gan Z. Radiofrequency-Driven and Slow-Magic-Angle-Sample-Spinning Polarization-Transfer Techniques: A Comparative Study. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 1998; 131:254-260. [PMID: 9571101 DOI: 10.1006/jmre.1998.1359] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
The rate constant of radiofrequency-driven (RF-driven) polarization transfer and that of polarization transfer under slow-magic-angle sample spinning (S-MAS) are compared using a model system, polycrystalline alpha-alpha'-13C2-phthalic acid. While the rate constant under RF irradiation in static samples strongly depends on the orientation of the internuclear vector, the rate constant under S-MAS is hardly sensitive to that orientation and, thus, depends almost exclusively on the internuclear distance. Consequently, polarization-transfer rate constants obtained under S-MAS can be interpreted more simply when used to study local order in polycrystalline or amorphous solids. Copyright 1998 Academic Press.
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Affiliation(s)
- P Robyr
- Laboratorium für Physikalische Chemie, ETH-Zentrum, Zürich, CH-8092, Switzerland
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Goetz JM, Schaefer J. Orientational information in solids from REDOR sidebands. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 1997; 129:222-223. [PMID: 9441889 DOI: 10.1006/jmre.1997.1269] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Affiliation(s)
- J M Goetz
- Department of Chemistry, Washington University, St. Louis, Missouri 63130, USA
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Hodgkinson P, Emsley L. The reliability of the determination of tensor parameters by solid-state nuclear magnetic resonance. J Chem Phys 1997. [DOI: 10.1063/1.474844] [Citation(s) in RCA: 90] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Heller J, Laws DD, Tomaselli M, King DS, Wemmer DE, Pines A, Havlin RH, Oldfield E. Determination of Dihedral Angles in Peptides through Experimental and Theoretical Studies of α-Carbon Chemical Shielding Tensors. J Am Chem Soc 1997. [DOI: 10.1021/ja970124k] [Citation(s) in RCA: 76] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- J. Heller
- Contribution from the Graduate Group in Biophysics, Department of Chemistry, and Howard Hughes Medical Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, Structural Biology Division and Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, and Department of Chemistry, University of Illinois at UrbanaChampaign, Urbana, Illinois 61801
| | - D. D. Laws
- Contribution from the Graduate Group in Biophysics, Department of Chemistry, and Howard Hughes Medical Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, Structural Biology Division and Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, and Department of Chemistry, University of Illinois at UrbanaChampaign, Urbana, Illinois 61801
| | - M. Tomaselli
- Contribution from the Graduate Group in Biophysics, Department of Chemistry, and Howard Hughes Medical Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, Structural Biology Division and Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, and Department of Chemistry, University of Illinois at UrbanaChampaign, Urbana, Illinois 61801
| | - D. S. King
- Contribution from the Graduate Group in Biophysics, Department of Chemistry, and Howard Hughes Medical Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, Structural Biology Division and Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, and Department of Chemistry, University of Illinois at UrbanaChampaign, Urbana, Illinois 61801
| | - D. E. Wemmer
- Contribution from the Graduate Group in Biophysics, Department of Chemistry, and Howard Hughes Medical Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, Structural Biology Division and Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, and Department of Chemistry, University of Illinois at UrbanaChampaign, Urbana, Illinois 61801
| | - A. Pines
- Contribution from the Graduate Group in Biophysics, Department of Chemistry, and Howard Hughes Medical Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, Structural Biology Division and Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, and Department of Chemistry, University of Illinois at UrbanaChampaign, Urbana, Illinois 61801
| | - R. H. Havlin
- Contribution from the Graduate Group in Biophysics, Department of Chemistry, and Howard Hughes Medical Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, Structural Biology Division and Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, and Department of Chemistry, University of Illinois at UrbanaChampaign, Urbana, Illinois 61801
| | - E. Oldfield
- Contribution from the Graduate Group in Biophysics, Department of Chemistry, and Howard Hughes Medical Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, Structural Biology Division and Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, and Department of Chemistry, University of Illinois at UrbanaChampaign, Urbana, Illinois 61801
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