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For: Wills NM, Gesteland RF, Atkins JF. Evidence that a downstream pseudoknot is required for translational read-through of the Moloney murine leukemia virus gag stop codon. Proc Natl Acad Sci U S A 1991;88:6991-5. [PMID: 1871115 PMCID: PMC52219 DOI: 10.1073/pnas.88.16.6991] [Citation(s) in RCA: 130] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]  Open
Number Cited by Other Article(s)
51
Garg I, Deo N. Structural and thermodynamic properties of a linearly perturbed matrix model for RNA folding. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2010;33:359-367. [PMID: 21086016 DOI: 10.1140/epje/i2010-10669-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2010] [Accepted: 10/13/2010] [Indexed: 05/30/2023]
52
Hogg JR, Goff SP. Upf1 senses 3'UTR length to potentiate mRNA decay. Cell 2010;143:379-89. [PMID: 21029861 DOI: 10.1016/j.cell.2010.10.005] [Citation(s) in RCA: 275] [Impact Index Per Article: 19.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2010] [Revised: 08/03/2010] [Accepted: 10/01/2010] [Indexed: 11/30/2022]
53
Lobanov AV, Turanov AA, Hatfield DL, Gladyshev VN. Dual functions of codons in the genetic code. Crit Rev Biochem Mol Biol 2010;45:257-65. [PMID: 20446809 DOI: 10.3109/10409231003786094] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
54
Fixsen SM, Howard MT. Processive selenocysteine incorporation during synthesis of eukaryotic selenoproteins. J Mol Biol 2010;399:385-96. [PMID: 20417644 DOI: 10.1016/j.jmb.2010.04.033] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2010] [Revised: 04/12/2010] [Accepted: 04/19/2010] [Indexed: 10/19/2022]
55
Namy O, Rousset JP. Specification of Standard Amino Acids by Stop Codons. RECODING: EXPANSION OF DECODING RULES ENRICHES GENE EXPRESSION 2010. [DOI: 10.1007/978-0-387-89382-2_4] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
56
Berry MJ, Howard MT. Reprogramming the Ribosome for Selenoprotein Expression: RNA Elements and Protein Factors. ACTA ACUST UNITED AC 2009. [DOI: 10.1007/978-0-387-89382-2_2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/27/2023]
57
Lao NT, Maloney AP, Atkins JF, Kavanagh TA. Versatile dual reporter gene systems for investigating stop codon readthrough in plants. PLoS One 2009;4:e7354. [PMID: 19816579 PMCID: PMC2754532 DOI: 10.1371/journal.pone.0007354] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2009] [Accepted: 09/11/2009] [Indexed: 12/04/2022]  Open
58
Atkins JF, Gesteland RF, Pennell S. Pseudoknot-Dependent Programmed —1 Ribosomal Frameshifting: Structures, Mechanisms and Models. RECODING: EXPANSION OF DECODING RULES ENRICHES GENE EXPRESSION 2009;24. [PMCID: PMC7119991 DOI: 10.1007/978-0-387-89382-2_7] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
59
Petty AP, Dick CL, Lindsey JS. Translation of an atypical human cDNA requires fidelity of apurine-pyrimidine repeat region and recoding. Gene 2008;414:49-59. [PMID: 18378409 DOI: 10.1016/j.gene.2008.02.006] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2008] [Accepted: 02/11/2008] [Indexed: 12/18/2022]
60
Forbes EM, Nieduszynska SR, Brunton FK, Gibson J, Glover LA, Stansfield I. Control of gag-pol gene expression in the Candida albicans retrotransposon Tca2. BMC Mol Biol 2007;8:94. [PMID: 17961216 PMCID: PMC2194720 DOI: 10.1186/1471-2199-8-94] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2007] [Accepted: 10/25/2007] [Indexed: 11/10/2022]  Open
61
Haslinger C, Stadler PF. RNA structures with pseudo-knots: graph-theoretical, combinatorial, and statistical properties. Bull Math Biol 2007;61:437-67. [PMID: 17883226 PMCID: PMC7197269 DOI: 10.1006/bulm.1998.0085] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
62
Brierley I, Pennell S, Gilbert RJC. Viral RNA pseudoknots: versatile motifs in gene expression and replication. Nat Rev Microbiol 2007;5:598-610. [PMID: 17632571 PMCID: PMC7096944 DOI: 10.1038/nrmicro1704] [Citation(s) in RCA: 150] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
63
Howard MT, Moyle MW, Aggarwal G, Carlson BA, Anderson CB. A recoding element that stimulates decoding of UGA codons by Sec tRNA[Ser]Sec. RNA (NEW YORK, N.Y.) 2007;13:912-20. [PMID: 17456565 PMCID: PMC1869034 DOI: 10.1261/rna.473907] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
64
Green L, Kim CH, Bustamante C, Tinoco I. Characterization of the mechanical unfolding of RNA pseudoknots. J Mol Biol 2007;375:511-28. [PMID: 18021801 PMCID: PMC7094456 DOI: 10.1016/j.jmb.2007.05.058] [Citation(s) in RCA: 72] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2007] [Revised: 05/09/2007] [Accepted: 05/10/2007] [Indexed: 11/18/2022]
65
Ludwig LB, Ambrus JL, Krawczyk KA, Sharma S, Brooks S, Hsiao CB, Schwartz SA. Human Immunodeficiency Virus-Type 1 LTR DNA contains an intrinsic gene producing antisense RNA and protein products. Retrovirology 2006;3:80. [PMID: 17090330 PMCID: PMC1654176 DOI: 10.1186/1742-4690-3-80] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2006] [Accepted: 11/08/2006] [Indexed: 11/27/2022]  Open
66
Urisman A, Molinaro RJ, Fischer N, Plummer SJ, Casey G, Klein EA, Malathi K, Magi-Galluzzi C, Tubbs RR, Ganem D, Silverman RH, DeRisi JL. Identification of a novel Gammaretrovirus in prostate tumors of patients homozygous for R462Q RNASEL variant. PLoS Pathog 2006;2:e25. [PMID: 16609730 PMCID: PMC1434790 DOI: 10.1371/journal.ppat.0020025] [Citation(s) in RCA: 472] [Impact Index Per Article: 26.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2005] [Accepted: 02/23/2006] [Indexed: 11/26/2022]  Open
67
Wills NM, Moore B, Hammer A, Gesteland RF, Atkins JF. A functional -1 ribosomal frameshift signal in the human paraneoplastic Ma3 gene. J Biol Chem 2006;281:7082-8. [PMID: 16407312 DOI: 10.1074/jbc.m511629200] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
68
Petros LM, Howard MT, Gesteland RF, Atkins JF. Polyamine sensing during antizyme mRNA programmed frameshifting. Biochem Biophys Res Commun 2005;338:1478-89. [PMID: 16269132 DOI: 10.1016/j.bbrc.2005.10.115] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2005] [Accepted: 10/20/2005] [Indexed: 11/24/2022]
69
Gendron K, Dulude D, Lemay G, Ferbeyre G, Brakier-Gingras L. The virion-associated Gag-Pol is decreased in chimeric Moloney murine leukemia viruses in which the readthrough region is replaced by the frameshift region of the human immunodeficiency virus type 1. Virology 2005;334:342-52. [PMID: 15780884 DOI: 10.1016/j.virol.2005.01.044] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2004] [Revised: 01/21/2005] [Accepted: 01/31/2005] [Indexed: 01/15/2023]
70
Howard MT, Aggarwal G, Anderson CB, Khatri S, Flanigan KM, Atkins JF. Recoding elements located adjacent to a subset of eukaryal selenocysteine-specifying UGA codons. EMBO J 2005;24:1596-607. [PMID: 15791204 PMCID: PMC1142574 DOI: 10.1038/sj.emboj.7600642] [Citation(s) in RCA: 81] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2005] [Accepted: 03/07/2005] [Indexed: 11/09/2022]  Open
71
Williams I, Richardson J, Starkey A, Stansfield I. Genome-wide prediction of stop codon readthrough during translation in the yeast Saccharomyces cerevisiae. Nucleic Acids Res 2004;32:6605-16. [PMID: 15602002 PMCID: PMC545446 DOI: 10.1093/nar/gkh1004] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2004] [Revised: 11/04/2004] [Accepted: 11/28/2004] [Indexed: 11/13/2022]  Open
72
Jaafar FM, Attoui H, de Micco P, de Lamballerie X. Termination and read-through proteins encoded by genome segment 9 of Colorado tick fever virus. J Gen Virol 2004;85:2237-2244. [PMID: 15269364 DOI: 10.1099/vir.0.80019-0] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
73
Kabakçioğlu A, Stella AL. Pseudoknots in a homopolymer. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2004;70:011802. [PMID: 15324079 DOI: 10.1103/physreve.70.011802] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2003] [Revised: 04/27/2004] [Indexed: 05/24/2023]
74
Gao X, Havecker ER, Baranov PV, Atkins JF, Voytas DF. Translational recoding signals between gag and pol in diverse LTR retrotransposons. RNA (NEW YORK, N.Y.) 2003;9:1422-30. [PMID: 14623998 PMCID: PMC1370496 DOI: 10.1261/rna.5105503] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
75
Orlova M, Yueh A, Leung J, Goff SP. Reverse Transcriptase of Moloney Murine Leukemia Virus Binds to Eukaryotic Release Factor 1 to Modulate Suppression of Translational Termination. Cell 2003;115:319-31. [PMID: 14636559 DOI: 10.1016/s0092-8674(03)00805-5] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
76
Chen C, Montelaro RC. Characterization of RNA elements that regulate gag-pol ribosomal frameshifting in equine infectious anemia virus. J Virol 2003;77:10280-7. [PMID: 12970412 PMCID: PMC228510 DOI: 10.1128/jvi.77.19.10280-10287.2003] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
77
Atkins JF, Baranov PV, Fayet O, Herr AJ, Howard MT, Ivanov IP, Matsufuji S, Miller WA, Moore B, Prère MF, Wills NM, Zhou J, Gesteland RF. Overriding standard decoding: implications of recoding for ribosome function and enrichment of gene expression. COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 2003;66:217-32. [PMID: 12762024 DOI: 10.1101/sqb.2001.66.217] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
78
Brunelle MN, Brakier-Gingras L, Lemay G. Replacement of murine leukemia virus readthrough mechanism by human immunodeficiency virus frameshift allows synthesis of viral proteins and virus replication. J Virol 2003;77:3345-50. [PMID: 12584361 PMCID: PMC149774 DOI: 10.1128/jvi.77.5.3345-3350.2003] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
79
Havecker ER, Voytas DF. The soybean retroelement SIRE1 uses stop codon suppression to express its envelope-like protein. EMBO Rep 2003;4:274-7. [PMID: 12634845 PMCID: PMC1315901 DOI: 10.1038/sj.embor.embor773] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2002] [Revised: 01/08/2003] [Accepted: 01/15/2003] [Indexed: 11/09/2022]  Open
80
Harrell L, Melcher U, Atkins JF. Predominance of six different hexanucleotide recoding signals 3' of read-through stop codons. Nucleic Acids Res 2002;30:2011-7. [PMID: 11972340 PMCID: PMC113845 DOI: 10.1093/nar/30.9.2011] [Citation(s) in RCA: 97] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
81
James CM, Ferguson TK, Leykam JF, Krzycki JA. The amber codon in the gene encoding the monomethylamine methyltransferase isolated from Methanosarcina barkeri is translated as a sense codon. J Biol Chem 2001;276:34252-8. [PMID: 11435424 DOI: 10.1074/jbc.m102929200] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
82
Bertram G, Innes S, Minella O, Richardson JP, Stansfield I. Endless possibilities: translation termination and stop codon recognition. MICROBIOLOGY (READING, ENGLAND) 2001;147:255-269. [PMID: 11158343 DOI: 10.1099/00221287-147-2-255] [Citation(s) in RCA: 114] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
83
Irwin PA, Voytas DF. Expression and processing of proteins encoded by the Saccharomyces retrotransposon Ty5. J Virol 2001;75:1790-7. [PMID: 11160677 PMCID: PMC114088 DOI: 10.1128/jvi.75.4.1790-1797.2001] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
84
Manuvakhova M, Keeling K, Bedwell DM. Aminoglycoside antibiotics mediate context-dependent suppression of termination codons in a mammalian translation system. RNA (NEW YORK, N.Y.) 2000;6:1044-1055. [PMID: 10917599 PMCID: PMC1369979 DOI: 10.1017/s1355838200000716] [Citation(s) in RCA: 287] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
85
Gale M, Tan SL, Katze MG. Translational control of viral gene expression in eukaryotes. Microbiol Mol Biol Rev 2000;64:239-80. [PMID: 10839817 PMCID: PMC98994 DOI: 10.1128/mmbr.64.2.239-280.2000] [Citation(s) in RCA: 256] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]  Open
86
Giedroc DP, Theimer CA, Nixon PL. Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting. J Mol Biol 2000;298:167-85. [PMID: 10764589 PMCID: PMC7126452 DOI: 10.1006/jmbi.2000.3668] [Citation(s) in RCA: 198] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
87
Hilleren P, Parker R. Mechanisms of mRNA surveillance in eukaryotes. Annu Rev Genet 2000;33:229-60. [PMID: 10690409 DOI: 10.1146/annurev.genet.33.1.229] [Citation(s) in RCA: 164] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
88
Todd S, Anderson C, Jolly DJ, Craik CS. HIV protease as a target for retrovirus vector-mediated gene therapy. BIOCHIMICA ET BIOPHYSICA ACTA 2000;1477:168-88. [PMID: 10708857 DOI: 10.1016/s0167-4838(99)00272-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
89
Nixon PL, Theimer CA, Giedroc DP. Thermodynamics of stabilization of RNA pseudoknots by cobalt(III) hexaammine. Biopolymers 1999;50:443-58. [PMID: 10423552 DOI: 10.1002/(sici)1097-0282(19991005)50:4<443::aid-bip9>3.0.co;2-c] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
90
Theimer CA, Giedroc DP. Equilibrium unfolding pathway of an H-type RNA pseudoknot which promotes programmed -1 ribosomal frameshifting. J Mol Biol 1999;289:1283-99. [PMID: 10373368 PMCID: PMC7126474 DOI: 10.1006/jmbi.1999.2850] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
91
Hilleren P, Parker R. mRNA surveillance in eukaryotes: kinetic proofreading of proper translation termination as assessed by mRNP domain organization? RNA (NEW YORK, N.Y.) 1999;5:711-9. [PMID: 10376871 PMCID: PMC1369798 DOI: 10.1017/s1355838299990519] [Citation(s) in RCA: 85] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
92
Alam SL, Wills NM, Ingram JA, Atkins JF, Gesteland RF. Structural studies of the RNA pseudoknot required for readthrough of the gag-termination codon of murine leukemia virus. J Mol Biol 1999;288:837-52. [PMID: 10329183 DOI: 10.1006/jmbi.1999.2713] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
93
Napthine S, Liphardt J, Bloys A, Routledge S, Brierley I. The role of RNA pseudoknot stem 1 length in the promotion of efficient -1 ribosomal frameshifting. J Mol Biol 1999;288:305-20. [PMID: 10329144 PMCID: PMC7126229 DOI: 10.1006/jmbi.1999.2688] [Citation(s) in RCA: 69] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
94
Holland JA, Hansen MR, Du Z, Hoffman DW. An examination of coaxial stacking of helical stems in a pseudoknot motif: the gene 32 messenger RNA pseudoknot of bacteriophage T2. RNA (NEW YORK, N.Y.) 1999;5:257-271. [PMID: 10024177 PMCID: PMC1369757 DOI: 10.1017/s1355838299981360] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
95
Wolgamot G, Bonham L, Miller AD. Sequence analysis of Mus dunni endogenous virus reveals a hybrid VL30/gibbon ape leukemia virus-like structure and a distinct envelope. J Virol 1998;72:7459-66. [PMID: 9696842 PMCID: PMC109979 DOI: 10.1128/jvi.72.9.7459-7466.1998] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/1998] [Accepted: 06/15/1998] [Indexed: 11/20/2022]  Open
96
Le SY, Chen JH, Pattabiraman N, Maizel JV. Ion-RNA interactions in the RNA pseudoknot of a ribosomal frameshifting site: molecular modeling studies. J Biomol Struct Dyn 1998;16:1-11. [PMID: 9745889 DOI: 10.1080/07391102.1998.10508221] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
97
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