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Tang L, Yang G, Ma M, Liu X, Li B, Xie J, Fu Y, Chen T, Yu Y, Chen W, Jiang D, Cheng J. An effector of a necrotrophic fungal pathogen targets the calcium-sensing receptor in chloroplasts to inhibit host resistance. MOLECULAR PLANT PATHOLOGY 2020; 21:686-701. [PMID: 32105402 PMCID: PMC7170781 DOI: 10.1111/mpp.12922] [Citation(s) in RCA: 49] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2019] [Revised: 01/14/2020] [Accepted: 01/20/2020] [Indexed: 05/03/2023]
Abstract
SsITL, a secretory protein of the necrotrophic phytopathogen Sclerotinia sclerotiorum, was previously reported to suppress host immunity at the early stages of infection. However, the molecular mechanism that SsITL uses to inhibit plant defence against S. sclerotiorum has not yet been elucidated. Here, we report that SsITL interacted with a chloroplast-localized calcium-sensing receptor, CAS, in chloroplasts. We found that CAS is a positive regulator of the salicylic acid signalling pathway in plant immunity to S. sclerotiorum and CAS-mediated resistance against S. sclerotiorum depends on Ca2+ signalling. Furthermore, we showed that SsITL could interfere with the plant salicylic acid (SA) signalling pathway and SsITL-expressing transgenic plants were more susceptible to S. sclerotiorum. However, truncated SsITLs (SsITL-NT1 or SsITL-CT1) that lost the ability to interact with CAS do not affect plant resistance to S. sclerotiorum. Taken together, our findings reveal that SsITL inhibits SA accumulation during the early stage of infection by interacting with CAS and then facilitating the infection by S. sclerotiorum.
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Affiliation(s)
- Liguang Tang
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
- The Provincial Key Lab of Plant Pathology of Hubei ProvinceCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
| | - Guogen Yang
- School of Plant ProtectionAnhui Agricultural UniversityHefeiChina
| | - Ming Ma
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
- The Provincial Key Lab of Plant Pathology of Hubei ProvinceCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
| | - Xiaofan Liu
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
- The Provincial Key Lab of Plant Pathology of Hubei ProvinceCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
| | - Bo Li
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
- The Provincial Key Lab of Plant Pathology of Hubei ProvinceCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
| | - Jiatao Xie
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
- The Provincial Key Lab of Plant Pathology of Hubei ProvinceCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
| | - Yanping Fu
- The Provincial Key Lab of Plant Pathology of Hubei ProvinceCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
| | - Tao Chen
- The Provincial Key Lab of Plant Pathology of Hubei ProvinceCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
| | - Yang Yu
- College of Plant ProtectionSouthwest UniversityChongqing CityChina
| | - Weidong Chen
- United States Department of AgricultureAgricultural Research ServiceWashington State UniversityPullmanWAUSA
| | - Daohong Jiang
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
- The Provincial Key Lab of Plant Pathology of Hubei ProvinceCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
| | - Jiasen Cheng
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
- The Provincial Key Lab of Plant Pathology of Hubei ProvinceCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan, Hubei ProvinceChina
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La VH, Lee BR, Islam MT, Mamun MA, Park SH, Bae DW, Kim TH. Characterization of Glutamate-Mediated Hormonal Regulatory Pathway of the Drought Responses in Relation to Proline Metabolism in Brassica napus L. PLANTS (BASEL, SWITZERLAND) 2020; 9:E512. [PMID: 32316109 PMCID: PMC7237994 DOI: 10.3390/plants9040512] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2020] [Revised: 04/06/2020] [Accepted: 04/14/2020] [Indexed: 11/16/2022]
Abstract
Proline metabolism influences the metabolic and/or signaling pathway in regulating plant stress responses. This study aimed to characterize the physiological significance of glutamate (Glu)-mediated proline metabolism in the drought stress responses, focusing on the hormonal regulatory pathway. The responses of cytosolic Ca2+ signaling, proline metabolism, and redox components to the exogenous application of Glu in well-watered or drought-stressed plants were interpreted in relation to endogenous hormone status and their signaling genes. Drought-enhanced level of abscisic acid (ABA) was concomitant with the accumulation of ROS and proline, as well as loss of reducing potential, which was assessed by measuring NAD(P)H/NAD(P)+ and GSH/GSSG ratios. Glu application to drought-stressed plants increased both salicylic acid (SA) and cytosolic Ca2+ levels, with the highest expression of calcium-dependent protein kinase (CPK5) and salicylic acid synthesis-related ICS1. The SA-enhanced CPK5 expression was closely associated with further enhancement of proline synthesis-related genes (P5CS1, P5CS2, and P5CR) expression and a reset of reducing potential with enhanced expression of redox regulating genes (TRXh5 and GRXC9) in a SA-mediated NPR1- and/or PR1-dependent manner. These results clearly indicate that Glu-activated interplay between SA- and CPK5-signaling as well as Glu-enhanced proline synthesis are crucial in the amelioration of drought stress in Brassica napus.
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Affiliation(s)
- Van Hien La
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture & Life Sciences, Chonnam National University, Gwangju 61186, Korea; (V.H.L.); (B.-R.L.); (M.T.I.); (M.A.M.); (S.-H.P.)
| | - Bok-Rye Lee
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture & Life Sciences, Chonnam National University, Gwangju 61186, Korea; (V.H.L.); (B.-R.L.); (M.T.I.); (M.A.M.); (S.-H.P.)
- Asian Pear Research Institute, Chonnam National University, Gwangju 61186, Korea
| | - Md. Tabibul Islam
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture & Life Sciences, Chonnam National University, Gwangju 61186, Korea; (V.H.L.); (B.-R.L.); (M.T.I.); (M.A.M.); (S.-H.P.)
- Alson H. Smith Jr. Agricultural Research and Extension Center, School of Plant and Environmental Sciences, Virginia Tech, Winchester, VA 22602, USA
| | - Md. Al Mamun
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture & Life Sciences, Chonnam National University, Gwangju 61186, Korea; (V.H.L.); (B.-R.L.); (M.T.I.); (M.A.M.); (S.-H.P.)
| | - Sang-Hyun Park
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture & Life Sciences, Chonnam National University, Gwangju 61186, Korea; (V.H.L.); (B.-R.L.); (M.T.I.); (M.A.M.); (S.-H.P.)
| | - Dong-Won Bae
- Biomaterial Analytical Laboratory, Central Instruments Facility, Gyeongsang National University, Jinju F52828, Korea;
| | - Tae-Hwan Kim
- Department of Animal Science, Institute of Agricultural Science and Technology, College of Agriculture & Life Sciences, Chonnam National University, Gwangju 61186, Korea; (V.H.L.); (B.-R.L.); (M.T.I.); (M.A.M.); (S.-H.P.)
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53
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Liu J, Lenzoni G, Knight MR. Design Principle for Decoding Calcium Signals to Generate Specific Gene Expression Via Transcription. PLANT PHYSIOLOGY 2020; 182:1743-1761. [PMID: 31744935 PMCID: PMC7140924 DOI: 10.1104/pp.19.01003] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2019] [Accepted: 10/31/2019] [Indexed: 05/18/2023]
Abstract
The second messenger calcium plays a key role in conveying specificity of signaling pathways in plant cells. Specific calcium signatures are decoded to generate correct gene expression responses and amplification of calcium signatures is vital to this process. (1) It is not known if this amplification is an intrinsic property of all calcium-regulated gene expression responses and whether all calcium signatures have the potential to be amplified, or (2) how a given calcium signature maintains specificity in cells containing a great number of transcription factors (TFs) and other proteins with the potential to be calcium-regulated. The work presented here uncovers the design principle by which it is possible to decode calcium signals into specific changes in gene transcription in plant cells. Regarding the first question, we found that the binding mechanism between protein components possesses an intrinsic property that will nonlinearly amplify any calcium signal. This nonlinear amplification allows plant cells to effectively distinguish the kinetics of different calcium signatures to produce specific and appropriate changes in gene expression. Regarding the second question, we found that the large number of calmodulin (CaM)-binding TFs or proteins in plant cells form a buffering system such that the concentration of an active CaM-binding TF is insensitive to the concentration of any other CaM-binding protein, thus maintaining specificity. The design principle revealed by this work can be used to explain how any CaM-binding TF decodes calcium signals to generate specific gene expression responses in plant cells via transcription.
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Affiliation(s)
- Junli Liu
- Department of Biosciences, Durham University, Durham DH1 3LE, United Kingdom
| | - Gioia Lenzoni
- School of Pharmaceutical Sciences, University of Geneva, Geneva CH-1211, Switzerland
| | - Marc R Knight
- Department of Biosciences, Durham University, Durham DH1 3LE, United Kingdom
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54
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Wu F, Chi Y, Jiang Z, Xu Y, Xie L, Huang F, Wan D, Ni J, Yuan F, Wu X, Zhang Y, Wang L, Ye R, Byeon B, Wang W, Zhang S, Sima M, Chen S, Zhu M, Pei J, Johnson DM, Zhu S, Cao X, Pei C, Zai Z, Liu Y, Liu T, Swift GB, Zhang W, Yu M, Hu Z, Siedow JN, Chen X, Pei ZM. Hydrogen peroxide sensor HPCA1 is an LRR receptor kinase in Arabidopsis. Nature 2020; 578:577-581. [PMID: 32076270 DOI: 10.1038/s41586-020-2032-3] [Citation(s) in RCA: 262] [Impact Index Per Article: 65.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Accepted: 01/22/2020] [Indexed: 01/09/2023]
Abstract
Hydrogen peroxide (H2O2) is a major reactive oxygen species in unicellular and multicellular organisms, and is produced extracellularly in response to external stresses and internal cues1-4. H2O2 enters cells through aquaporin membrane proteins and covalently modifies cytoplasmic proteins to regulate signalling and cellular processes. However, whether sensors for H2O2 also exist on the cell surface remains unknown. In plant cells, H2O2 triggers an influx of Ca2+ ions, which is thought to be involved in H2O2 sensing and signalling. Here, by using forward genetic screens based on Ca2+ imaging, we isolated hydrogen-peroxide-induced Ca2+ increases (hpca) mutants in Arabidopsis, and identified HPCA1 as a leucine-rich-repeat receptor kinase belonging to a previously uncharacterized subfamily that features two extra pairs of cysteine residues in the extracellular domain. HPCA1 is localized to the plasma membrane and is activated by H2O2 via covalent modification of extracellular cysteine residues, which leads to autophosphorylation of HPCA1. HPCA1 mediates H2O2-induced activation of Ca2+ channels in guard cells and is required for stomatal closure. Our findings help to identify how the perception of extracellular H2O2 is integrated with responses to various external stresses and internal cues in plants, and have implications for the design of crops with enhanced fitness.
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Affiliation(s)
- Feihua Wu
- Department of Biology, Duke University, Durham, NC, USA.,Fitzpatrick Institute for Photonics, Duke University, Durham, NC, USA.,College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, China.,College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China.,Department of Horticulture, Foshan University, Foshan, China
| | - Yuan Chi
- Department of Biology, Duke University, Durham, NC, USA.,College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China.,College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Zhonghao Jiang
- Department of Biology, Duke University, Durham, NC, USA.,Fitzpatrick Institute for Photonics, Duke University, Durham, NC, USA.,College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, China
| | - Yuanyuan Xu
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Ling Xie
- Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, NC, USA
| | - Feifei Huang
- Department of Biology, Duke University, Durham, NC, USA.,College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, China
| | - Di Wan
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Jun Ni
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Fang Yuan
- Department of Biology, Duke University, Durham, NC, USA.,College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Xiaomei Wu
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Yanyan Zhang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Li Wang
- Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, NC, USA
| | - Rui Ye
- Department of Biology, Duke University, Durham, NC, USA
| | | | - Wenhua Wang
- Department of Biology, Duke University, Durham, NC, USA
| | - Shu Zhang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China.,College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Matthew Sima
- Department of Biology, Duke University, Durham, NC, USA.,College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, China
| | - Suping Chen
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Minghua Zhu
- Department of Immunology, Duke University Medical Center, Durham, NC, USA
| | - Jessica Pei
- Department of Biology, Duke University, Durham, NC, USA.,Department of Neuroscience and Behavioral Biology, Emory University, Atlanta, GA, USA
| | | | - Shan Zhu
- Department of Biology, Duke University, Durham, NC, USA.,College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Xiaoqiang Cao
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | | | - Zijing Zai
- Department of Biology, Duke University, Durham, NC, USA.,College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, China
| | - Yihao Liu
- Department of Biology, Duke University, Durham, NC, USA
| | - Tianyi Liu
- Department of Biology, Duke University, Durham, NC, USA
| | - Gary B Swift
- Department of Physics, Duke University, Durham, NC, USA
| | - Weiguo Zhang
- Department of Immunology, Duke University Medical Center, Durham, NC, USA
| | - Min Yu
- Department of Horticulture, Foshan University, Foshan, China
| | - Zhangli Hu
- College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, China
| | | | - Xian Chen
- Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, NC, USA
| | - Zhen-Ming Pei
- Department of Biology, Duke University, Durham, NC, USA. .,Fitzpatrick Institute for Photonics, Duke University, Durham, NC, USA.
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55
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Ambroise V, Legay S, Guerriero G, Hausman JF, Cuypers A, Sergeant K. The Roots of Plant Frost Hardiness and Tolerance. PLANT & CELL PHYSIOLOGY 2020; 61:3-20. [PMID: 31626277 PMCID: PMC6977023 DOI: 10.1093/pcp/pcz196] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2019] [Accepted: 10/06/2019] [Indexed: 05/02/2023]
Abstract
Frost stress severely affects agriculture and agroforestry worldwide. Although many studies about frost hardening and resistance have been published, most of them focused on the aboveground organs and only a minority specifically targets the roots. However, roots and aboveground tissues have different physiologies and stress response mechanisms. Climate models predict an increase in the magnitude and frequency of late-frost events, which, together with an observed loss of soil insulation, will greatly decrease plant primary production due to damage at the root level. Molecular and metabolic responses inducing root cold hardiness are complex. They involve a variety of processes related to modifications in cell wall composition, maintenance of the cellular homeostasis and the synthesis of primary and secondary metabolites. After a summary of the current climatic models, this review details the specificity of freezing stress at the root level and explores the strategies roots developed to cope with freezing stress. We then describe the level to which roots can be frost hardy, depending on their age, size category and species. After that, we compare the environmental signals inducing cold acclimation and frost hardening in the roots and aboveground organs. Subsequently, we discuss how roots sense cold at a cellular level and briefly describe the following signal transduction pathway, which leads to molecular and metabolic responses associated with frost hardening. Finally, the current options available to increase root frost tolerance are explored and promising lines of future research are discussed.
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Affiliation(s)
- Valentin Ambroise
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology (LIST), 5 Avenue des Hauts-Fourneaux, L-4362 Esch/Alzette, Luxembourg
- Centre for Environmental Sciences, Hasselt University, Agoralaan Building D, B-3590 Diepenbeek, Belgium
| | - Sylvain Legay
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology (LIST), 5 Avenue des Hauts-Fourneaux, L-4362 Esch/Alzette, Luxembourg
| | - Gea Guerriero
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology (LIST), 5 Avenue des Hauts-Fourneaux, L-4362 Esch/Alzette, Luxembourg
| | - Jean-Francois Hausman
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology (LIST), 5 Avenue des Hauts-Fourneaux, L-4362 Esch/Alzette, Luxembourg
| | - Ann Cuypers
- Centre for Environmental Sciences, Hasselt University, Agoralaan Building D, B-3590 Diepenbeek, Belgium
| | - Kjell Sergeant
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology (LIST), 5 Avenue des Hauts-Fourneaux, L-4362 Esch/Alzette, Luxembourg
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56
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Rothkegel K, Sandoval P, Soto E, Ulloa L, Riveros A, Lillo-Carmona V, Cáceres-Molina J, Almeida AM, Meneses C. Dormant but Active: Chilling Accumulation Modulates the Epigenome and Transcriptome of Prunus avium During Bud Dormancy. FRONTIERS IN PLANT SCIENCE 2020; 11:1115. [PMID: 32765576 PMCID: PMC7380246 DOI: 10.3389/fpls.2020.01115] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2020] [Accepted: 07/06/2020] [Indexed: 05/22/2023]
Abstract
Temperate deciduous fruit tree species like sweet cherry (Prunus avium) require long periods of low temperatures to trigger dormancy release and flowering. In addition to sequence-based genetic diversity, epigenetic variation may contribute to different chilling requirements among varieties. For the low chill variety 'Royal Dawn' and high chill variety 'Kordia', we studied the methylome of floral buds during chilling accumulation using MethylC-seq to identify differentially methylated regions (DMRs) during chilling hours (CH) accumulation, followed by transcriptome analysis to correlate changes in gene expression with DNA methylation. We found that during chilling accumulation, DNA methylation increased from 173 CH in 'Royal Dawn' and 443 CH in 'Kordia' and was mostly associated with the CHH context. In addition, transcriptional changes were observed from 443 CH in 'Kordia' with 1,210 differentially expressed genes, increasing to 4,292 genes at 1,295 CH. While 'Royal Dawn' showed approximately 5,000 genes differentially expressed at 348 CH and 516 CH, showing a reprogramming that was specific for each genotype. From conserved upregulated genes that overlapped with hypomethylated regions and downregulated genes that overlapped with hypermethylated regions in both varieties, we identified genes related to cold-sensing, cold-signaling, oxidation-reduction process, metabolism of phenylpropanoids and lipids, and a MADS-box SVP-like gene. As a complementary analysis, we used conserved and non-conserved DEGs that presented a negative correlation between DNA methylations and mRNA levels across all chilling conditions, obtaining Gene Ontology (GO) categories related to abiotic stress, metabolism, and oxidative stress. Altogether, this data indicates that changes in DNA methylation precedes transcript changes and may occur as an early response to low temperatures to increase the cold tolerance in the endodormancy period, contributing with the first methylome information about the effect of environmental cues over two different genotypes of sweet cherry.
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Affiliation(s)
- Karin Rothkegel
- Centro de Biotecnología Vegetal, Facultad Ciencias de la Vida, Universidad Andrés Bello, Santiago, Chile
| | - Paula Sandoval
- Centro de Biotecnología Vegetal, Facultad Ciencias de la Vida, Universidad Andrés Bello, Santiago, Chile
| | - Esteban Soto
- Centro de Biotecnología Vegetal, Facultad Ciencias de la Vida, Universidad Andrés Bello, Santiago, Chile
| | - Lissette Ulloa
- Centro de Biotecnología Vegetal, Facultad Ciencias de la Vida, Universidad Andrés Bello, Santiago, Chile
| | - Anibal Riveros
- Centro de Biotecnología Vegetal, Facultad Ciencias de la Vida, Universidad Andrés Bello, Santiago, Chile
| | - Victoria Lillo-Carmona
- Centro de Biotecnología Vegetal, Facultad Ciencias de la Vida, Universidad Andrés Bello, Santiago, Chile
| | - Javier Cáceres-Molina
- Centro de Biotecnología Vegetal, Facultad Ciencias de la Vida, Universidad Andrés Bello, Santiago, Chile
| | - Andrea Miyasaka Almeida
- Centro de Genómica y Bioinformática, Facultad de Ciencias, Universidad Mayor, Santiago, Chile
- ;*Correspondence: Andrea Miyasaka Almeida, ; Claudio Meneses,
| | - Claudio Meneses
- Centro de Biotecnología Vegetal, Facultad Ciencias de la Vida, Universidad Andrés Bello, Santiago, Chile
- FONDAP, Center for Genome Regulation, Universidad Andrés Bello, Santiago, Chile
- ;*Correspondence: Andrea Miyasaka Almeida, ; Claudio Meneses,
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57
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Li J, Zhou Q, Zhou X, Wei B, Zhao Y, Ji S. Calcium Treatment Alleviates Pericarp Browning of 'Nanguo' Pears by Regulating the GABA Shunt After Cold Storage. FRONTIERS IN PLANT SCIENCE 2020; 11:580986. [PMID: 33042193 PMCID: PMC7522215 DOI: 10.3389/fpls.2020.580986] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Accepted: 08/31/2020] [Indexed: 05/07/2023]
Abstract
Long-term storage of pear fruit at low temperature can retard senescence but may result in pericarp browning. We previously reported that increasing endogenous γ-aminobutyrate (GABA) content by exogenous GABA treatment can maintain mitochondrial structure integrity, thereby alleviating pericarp browning of 'Nanguo' pears after cold storage. Here, we tested the effectiveness of Ca2+ treatment on pericarp browning in relation to GABA biosynthesis. Fruit browning was reduced by treatment with Ca2+ after 180 days of storage. Pericarp Ca2+ and calmodulin content in treated fruit increased, and concomitantly, endogenous GABA content, key GABA synthesis-related enzyme activity, and gene expression were upregulated. Moreover, the mitochondrial structure in the pericarp tissue was found to be well preserved. Thus, Ca2+ treatment effectively reduced pericarp browning of refrigerated 'Nanguo' pears owing to improvement in the GABA biosynthesis capacity in the fruit.
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58
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Wang PH, Lee CE, Lin YS, Lee MH, Chen PY, Chang HC, Chang IF. The Glutamate Receptor-Like Protein GLR3.7 Interacts With 14-3-3ω and Participates in Salt Stress Response in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2019; 10:1169. [PMID: 31632419 DOI: 10.3389/fpls.2019.01169/full] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 04/23/2019] [Accepted: 08/27/2019] [Indexed: 05/25/2023]
Abstract
Ionotropic glutamate receptors (iGluRs) are ligand-gated cation channels that mediate fast excitatory neurotransmission in the mammalian central nervous system. In the model plant Arabidopsis thaliana, a family of 20 glutamate receptor-like proteins (GLRs) shares similarities to animal iGluRs in sequence and predicted secondary structure. However, the function of GLRs in plants is little known. In the present study, a serine site (Ser-860) of AtGLR3.7 phosphorylated by a calcium-dependent protein kinase (CDPK) was identified and confirmed by an in vitro kinase assay. Using a bimolecular fluorescence complementation and quartz crystal microbalance analyses, the physical interaction between AtGLR3.7 and the 14-3-3ω protein was confirmed. The mutation of Ser-860 to alanine abolished this interaction, indicating that Ser-860 is the 14-3-3ω binding site of AtGLR3.7. Compared with wild type, seed germination of the glr3.7-2 mutant was more sensitive to salt stress. However, the primary root growth of GLR3.7-S860A overexpression lines was less sensitive to salt stress than that of the wild-type line. In addition, the increase of cytosolic calcium ion concentration by salt stress was significantly lower in the glr3.7-2 mutant line than in the wild-type line. Moreover, association of 14-3-3 proteins to microsomal fractions was less in GLR3.7-S860A overexpression lines than in GLR3.7 overexpression line under 150 mM NaCl salt stress condition. Overall, our results indicated that GLR3.7 is involved in salt stress response in A. thaliana by affecting calcium signaling.
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Affiliation(s)
- Po-Hsun Wang
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Cheng-En Lee
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Yi-Sin Lin
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Man-Hsuan Lee
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Pei-Yuan Chen
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Hui-Chun Chang
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Ing-Feng Chang
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
- Department of Life Science, National Taiwan University, Taipei, Taiwan
- Genome and Systems Biology Degree Program, National Taiwan University and Academia Sinica, Taipei, Taiwan
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59
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Seifikalhor M, Aliniaeifard S, Shomali A, Azad N, Hassani B, Lastochkina O, Li T. Calcium signaling and salt tolerance are diversely entwined in plants. PLANT SIGNALING & BEHAVIOR 2019; 14:1665455. [PMID: 31564206 PMCID: PMC6804723 DOI: 10.1080/15592324.2019.1665455] [Citation(s) in RCA: 63] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2019] [Revised: 08/26/2019] [Accepted: 08/28/2019] [Indexed: 05/11/2023]
Abstract
In plants dehydration imposed by salinity can invoke physical changes at the interface of the plasma membrane and cell wall. Changes in hydrostatic pressure activate ion channels and cause depolarization of the plasma membrane due to disturbance in ion transport. During the initial phases of salinity stress, the relatively high osmotic potential of the rhizosphere enforces the plant to use a diverse spectrum of strategies to optimize water and nutrient uptake. Signals of salt stress are recognized by specific root receptors that activate an osmosensing network. Plant response to hyperosmotic tension is closely linked to the calcium (Ca2+) channels and interacting proteins such as calmodulin. A rapid rise in cytosolic Ca2+ levels occurs within seconds of exposure to salt stress. Plants employ multiple sensors and signaling components to sense and respond to salinity stress, of which most are closely related to Ca2+ sensing and signaling. Several tolerance strategies such as osmoprotectant accumulation, antioxidant boosting, polyaminses and nitric oxide (NO) machineries are also coordinated by Ca2+ signaling. Substantial research has been done to discover the salt stress pathway and tolerance mechanism in plants, resulting in new insights into the perception of salt stress and the downstream signaling that happens in response. Nevertheless, the role of multifunctional components such as Ca2+ has not been sufficiently addressed in the context of salt stress. In this review, we elaborate that the salt tolerance signaling pathway converges with Ca2+ signaling in diverse pathways. We summarize knowledge related to different dimensions of salt stress signaling pathways in the cell by emphasizing the administrative role of Ca2+ signaling on salt perception, signaling, gene expression, ion homeostasis and adaptive responses.
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Affiliation(s)
- Maryam Seifikalhor
- Department of Plant Biology, College of Science, University of Tehran, Tehran, Iran
| | - Sasan Aliniaeifard
- Department of Horticulture, College of Aburaihan, University of Tehran, Tehran, Iran
| | - Aida Shomali
- Department of Horticulture, College of Aburaihan, University of Tehran, Tehran, Iran
| | - Nikoo Azad
- Department of Plant Biology, College of Science, University of Tehran, Tehran, Iran
| | - Batool Hassani
- Department of Plant Sciences, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Oksana Lastochkina
- Ufa Federal Research Centre, Russian Academy of Sciences, Bashkir Research Institute of Agriculture, Ufa, Russia
- Ufa Federal Research Centre, Russian Academy of Sciences, Institute of Biochemistry and Genetics, Ufa, Russia
| | - Tao Li
- Chinese Academy of Agricultural Science, Institute of Environment and Sustainable Development in Agriculture, Beijing, China
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Profiles of calreticulin and Ca2+ concentration under low temperature and salinity stress in the mud crab, Scylla paramamosain. PLoS One 2019; 14:e0220405. [PMID: 31344118 PMCID: PMC6657906 DOI: 10.1371/journal.pone.0220405] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Accepted: 07/15/2019] [Indexed: 11/19/2022] Open
Abstract
Calreticulin (CRT) is an important molecular chaperon crucial to survival of organisms under adverse conditions. In this study, the potential roles of CRT in the mud crab, Scylla paramamosain, were investigated. Firstly, SpCRT gene expression was detected in various tissues of S. paramamosain with the highest expression found in the hepatopancreas. To evaluate potential role of SpCRT in cold adaption, sub-adult crabs were subjected to temperatures of 10, 15, 20 and 25°C and the profiles of SpCRT gene were determined in the hepatopancreas, chela muscle and gills. The results showed that the expressions of SpCRT mRNA in these tissues were significantly higher for those crabs exposed to low temperatures of 10 and 15°C as compared to those exposed to the higher temperatures, indicating SpCRT was involved in cold adaptation-probably through facilitating protein folding. When low temperature 10°C or 15°C was further combined with high and low salinity stress, the expression of SpCRT mRNA at low salinity (10 ppt) was in most cases significantly higher than that at high salinity (35 ppt), suggesting that under low temperatures, low salinity may represents a more stressful condition to the crab than high salinity. It was also shown that when crabs challenged by 10°C, Ca2+ concentration increased rapidly in the hepatopancreas and an in vitro experiment further showed that the expression of SpCRT mRNA increased concurrently with added Ca2+ concentration; these results together imply that Ca2+ probably plays a major role in low temperature signaling, which induces expression of genes related to cold adaption, such as CRT.
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Tian W, Hou C, Ren Z, Wang C, Zhao F, Dahlbeck D, Hu S, Zhang L, Niu Q, Li L, Staskawicz BJ, Luan S. A calmodulin-gated calcium channel links pathogen patterns to plant immunity. Nature 2019; 572:131-135. [PMID: 31316205 DOI: 10.1038/s41586-019-1413-y] [Citation(s) in RCA: 262] [Impact Index Per Article: 52.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2017] [Accepted: 06/25/2019] [Indexed: 11/09/2022]
Abstract
Pathogen-associated molecular patterns (PAMPs) activate innate immunity in both animals and plants. Although calcium has long been recognized as an essential signal for PAMP-triggered immunity in plants, the mechanism of PAMP-induced calcium signalling remains unknown1,2. Here we report that calcium nutrient status is critical for calcium-dependent PAMP-triggered immunity in plants. When calcium supply is sufficient, two genes that encode cyclic nucleotide-gated channel (CNGC) proteins, CNGC2 and CNGC4, are essential for PAMP-induced calcium signalling in Arabidopsis3-7. In a reconstitution system, we find that the CNGC2 and CNGC4 proteins together-but neither alone-assemble into a functional calcium channel that is blocked by calmodulin in the resting state. Upon pathogen attack, the channel is phosphorylated and activated by the effector kinase BOTRYTIS-INDUCED KINASE1 (BIK1) of the pattern-recognition receptor complex, and this triggers an increase in the concentration of cytosolic calcium8-10. The CNGC-mediated calcium entry thus provides a critical link between the pattern-recognition receptor complex and calcium-dependent immunity programs in the PAMP-triggered immunity signalling pathway in plants.
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Affiliation(s)
- Wang Tian
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA
| | - Congcong Hou
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA
| | - Zhijie Ren
- College of Life Sciences, Capital Normal University, Beijing, China
| | - Chao Wang
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA
| | - Fugeng Zhao
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing, China
| | - Douglas Dahlbeck
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA
| | - Songping Hu
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA
| | - Liying Zhang
- College of Life Sciences, Capital Normal University, Beijing, China
| | - Qi Niu
- College of Life Sciences, Capital Normal University, Beijing, China
| | - Legong Li
- College of Life Sciences, Capital Normal University, Beijing, China
| | - Brian J Staskawicz
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA
| | - Sheng Luan
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA.
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Ding Y, Shi Y, Yang S. Advances and challenges in uncovering cold tolerance regulatory mechanisms in plants. THE NEW PHYTOLOGIST 2019; 222:1690-1704. [PMID: 30664232 DOI: 10.1111/nph.15696] [Citation(s) in RCA: 328] [Impact Index Per Article: 65.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2018] [Accepted: 01/15/2019] [Indexed: 05/18/2023]
Abstract
Contents Summary I. Introduction II. Cold stress and physiological responses in plants III. Sensing of cold signals in plants IV. Messenger molecules involved in cold signal transduction V. Cold signal transduction in plants VI. Conclusions and perspectives Acknowledgements References SUMMARY: Cold stress is a major environmental factor that seriously affects plant growth and development, and influences crop productivity. Plants have evolved a series of mechanisms that allow them to adapt to cold stress at both the physiological and molecular levels. Over the past two decades, much progress has been made in identifying crucial components involved in cold-stress tolerance and dissecting their regulatory mechanisms. In this review, we summarize recent major advances in our understanding of cold signalling and put forward open questions in the field of plant cold-stress responses. Answering these questions should help elucidate the molecular mechanisms underlying plant tolerance to cold stress.
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Affiliation(s)
- Yanglin Ding
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Yiting Shi
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Shuhua Yang
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
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De Vriese K, Himschoot E, Dünser K, Nguyen L, Drozdzecki A, Costa A, Nowack MK, Kleine-Vehn J, Audenaert D, Beeckman T, Vanneste S. Identification of Novel Inhibitors of Auxin-Induced Ca 2+ Signaling via a Plant-Based Chemical Screen. PLANT PHYSIOLOGY 2019; 180:480-496. [PMID: 30737267 PMCID: PMC6501068 DOI: 10.1104/pp.18.01393] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2018] [Accepted: 01/29/2019] [Indexed: 05/06/2023]
Abstract
Many signal perception mechanisms are connected to Ca2+-based second messenger signaling to modulate specific cellular responses. The well-characterized plant hormone auxin elicits a very rapid Ca2+ signal. However, the cellular targets of auxin-induced Ca2+ are largely unknown. Here, we screened a biologically annotated chemical library for inhibitors of auxin-induced Ca2+ entry in plant cell suspensions to better understand the molecular mechanism of auxin-induced Ca2+ and to explore the physiological relevance of Ca2+ in auxin signal transduction. Using this approach, we defined a set of diverse, small molecules that interfere with auxin-induced Ca2+ entry. Based on annotated biological activities of the hit molecules, we found that auxin-induced Ca2+ signaling is, among others, highly sensitive to disruption of membrane proton gradients and the mammalian Ca2+ channel inhibitor bepridil. Whereas protonophores nonselectively inhibited auxin-induced and osmotic stress-induced Ca2+ signals, bepridil specifically inhibited auxin-induced Ca2+ We found evidence that bepridil severely alters vacuolar morphology and antagonized auxin-induced vacuolar remodeling. Further exploration of this plant-tailored collection of inhibitors will lead to a better understanding of auxin-induced Ca2+ entry and its relevance for auxin responses.
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Affiliation(s)
- Kjell De Vriese
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Gent, Belgium
| | - Ellie Himschoot
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Gent, Belgium
| | - Kai Dünser
- Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences Vienna (BOKU), 1190 Vienna, Austria
| | - Long Nguyen
- Screening Core, VIB, 9052 Gent, Belgium
- Centre for Bioassay Development and Screening (C-BIOS), Ghent University, 9052 Ghent, Belgium
| | - Andrzej Drozdzecki
- Screening Core, VIB, 9052 Gent, Belgium
- Centre for Bioassay Development and Screening (C-BIOS), Ghent University, 9052 Ghent, Belgium
| | - Alex Costa
- Department of Biosciences, University of Milan, 20133 Milan, Italy
| | - Moritz K Nowack
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Gent, Belgium
| | - Jürgen Kleine-Vehn
- Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences Vienna (BOKU), 1190 Vienna, Austria
| | - Dominique Audenaert
- Screening Core, VIB, 9052 Gent, Belgium
- Centre for Bioassay Development and Screening (C-BIOS), Ghent University, 9052 Ghent, Belgium
| | - Tom Beeckman
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Gent, Belgium
| | - Steffen Vanneste
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Gent, Belgium
- Lab of Plant Growth Analysis, Ghent University Global Campus, 21985 Incheon, Republic of Korea
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Baier M, Bittner A, Prescher A, van Buer J. Preparing plants for improved cold tolerance by priming. PLANT, CELL & ENVIRONMENT 2019; 42:782-800. [PMID: 29974962 DOI: 10.1111/pce.13394] [Citation(s) in RCA: 52] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2018] [Revised: 06/21/2018] [Accepted: 06/25/2018] [Indexed: 05/26/2023]
Abstract
Cold is a major stressor, which limits plant growth and development in many parts of the world, especially in the temperate climate zones. A large number of experimental studies has demonstrated that not only acclimation and entrainment but also the experience of single short stress events of various abiotic or biotic kinds (priming stress) can improve the tolerance of plants to chilling temperatures. This process, called priming, depends on a stress "memory". It does not change cold sensitivity per se but beneficially modifies the response to cold and can last for days, months, or even longer. Elicitor factors and antagonists accumulate due to increased biosynthesis or decreased degradation either during or after the priming stimulus. Comparison of priming studies investigating improved tolerance to chilling temperatures highlighted key regulatory functions of ROS/RNS and antioxidant enzymes, plant hormones, especially jasmonates, salicylates, and abscisic acid, and signalling metabolites, such as β- and γ-aminobutyric acid (BABA and GABA) and melatonin. We conclude that these elicitors and antagonists modify local and systemic cold tolerance by integration into cold-induced signalling cascades.
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Affiliation(s)
- Margarete Baier
- Plant Physiology, Dahlem Centre of Plant Sciences, Free University of Berlin, Berlin, Germany
| | - Andras Bittner
- Plant Physiology, Dahlem Centre of Plant Sciences, Free University of Berlin, Berlin, Germany
| | - Andreas Prescher
- Plant Physiology, Dahlem Centre of Plant Sciences, Free University of Berlin, Berlin, Germany
| | - Jörn van Buer
- Plant Physiology, Dahlem Centre of Plant Sciences, Free University of Berlin, Berlin, Germany
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65
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Lenzoni G, Knight MR. Increases in Absolute Temperature Stimulate Free Calcium Concentration Elevations in the Chloroplast. PLANT & CELL PHYSIOLOGY 2019; 60:538-548. [PMID: 30517735 DOI: 10.1093/pcp/pcy227] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2018] [Accepted: 11/21/2018] [Indexed: 05/18/2023]
Abstract
Plants need to sense increases in temperature to be able to adapt their physiology and development to survive; however, the mechanisms of heat perception are currently relatively poorly understood. Here we demonstrate that in response to elevated temperature, the free calcium concentration of the stroma of chloroplasts increases. This response is specific to the chloroplast, as no corresponding increase in calcium is seen in the cytosol. The chloroplast calcium response is dose dependent above a threshold. The magnitude of this calcium response is dependent upon absolute temperature, not the rate of heating. This response is dynamic: repeated stimulation leads to rapid attenuation of the response, which can be overcome by sensitization at a higher temperature. More long-term acclimation to different temperatures resets the basal sensitivity of the system, such that plants acclimated to lower temperatures are more sensitive than those acclimated to higher temperatures. The heat-induced chloroplast calcium response was partially dependent upon the calcium-sensing receptor CAS which has been shown previously to regulate other chloroplast calcium signaling responses. Taken together, our data demonstrate the ability of chloroplasts to sense absolute high temperature and produce commensurately quantitative stromal calcium response, the magnitude of which is a function of both current temperature and stress history.
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Affiliation(s)
- Gioia Lenzoni
- Department of Biosciences, Durham University, South Road, Durham, UK
| | - Marc R Knight
- Department of Biosciences, Durham University, South Road, Durham, UK
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Hiraki H, Uemura M, Kawamura Y. Calcium Signaling-Linked CBF/DREB1 Gene Expression was Induced Depending on the Temperature Fluctuation in the Field: Views from the Natural Condition of Cold Acclimation. PLANT & CELL PHYSIOLOGY 2019; 60:303-317. [PMID: 30380128 DOI: 10.1093/pcp/pcy210] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2018] [Accepted: 10/25/2018] [Indexed: 06/08/2023]
Abstract
Environmental adaptability is essential for plant survival. Though it is well known that a simple cooling or cold shock leads to Ca2+ signals, direct evidence has not been provided that plants use Ca2+ signals as a second messenger in the cold acclimation (CA) process in the field. By developing a technique to analyze Ca2+ signals using confocal cryomicroscopy, we investigated Ca2+ signals under several temperature conditions by combining the start temperature, cooling rate and cooling time duration. In both root and leaf cells, Ca2+ signals rapidly disappeared after cooling stopped, and thereafter under a constant low temperature no Ca2+ signal was observed. Interestingly, under the cooling regime from 2�C to -2�C, non-acclimated plants grown at 23�C hardly showed Ca2+ signals, but cold-acclimated plants at 2�C were able to form Ca2+ signals in root cells. These findings suggest that plants sense temperature decreases with Ca2+ signals while adjusting the temperature sensitivity to their own temperature environment. Furthermore, if the temperature is constant, no Ca2+ signal is induced even during CA. Then, we also focused on the CA under field conditions, rich in temperature fluctuations. In CA under field conditions, the expression patterns of CBF/DREB1 genes were distinctly different from those in artificial CA. Pharmacological studies with Ca2+ channel blockers showed that the Ca2+-induced expression of CBF/DREB1 genes was closely correlated with the amplitude of temperature fluctuation, suggesting that Ca2+ signals regulate CBF/DREB1 gene expression during CA under natural conditions.
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Affiliation(s)
- Hayato Hiraki
- The United Graduate School of Agricultural Sciences, Iwate University, Morioka, Japan
| | - Matsuo Uemura
- The United Graduate School of Agricultural Sciences, Iwate University, Morioka, Japan
- Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka, Japan
- Department of Plant-bioscience, Faculty of Agriculture, Iwate University, Morioka, Japan
| | - Yukio Kawamura
- The United Graduate School of Agricultural Sciences, Iwate University, Morioka, Japan
- Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka, Japan
- Department of Plant-bioscience, Faculty of Agriculture, Iwate University, Morioka, Japan
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Global Phosphoproteomic Analysis Reveals the Defense and Response Mechanisms of Jatropha Curcas Seedling under Chilling Stress. Int J Mol Sci 2019; 20:ijms20010208. [PMID: 30626061 PMCID: PMC6337099 DOI: 10.3390/ijms20010208] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2018] [Revised: 12/31/2018] [Accepted: 01/03/2019] [Indexed: 01/10/2023] Open
Abstract
As a promising energy plant for biodiesel, Jatropha curcas is a tropical and subtropical shrub and its growth is affected by one of major abiotic stress, chilling. Therefore, we adopt the phosphoproteomic analysis, physiological measurement and ultrastructure observation to illustrate the responsive mechanism of J. curcas seedling under chilling (4 °C) stress. After chilling for 6 h, 308 significantly changed phosphoproteins were detected. Prolonged the chilling treatment for 24 h, obvious physiological injury can be observed and a total of 332 phosphoproteins were examined to be significantly changed. After recovery (28 °C) for 24 h, 291 phosphoproteins were varied at the phosphorylation level. GO analysis showed that significantly changed phosphoproteins were mainly responsible for cellular protein modification process, transport, cellular component organization and signal transduction at the chilling and recovery periods. On the basis of protein-protein interaction network analysis, phosphorylation of several protein kinases, such as SnRK2, MEKK1, EDR1, CDPK, EIN2, EIN4, PI4K and 14-3-3 were possibly responsible for cross-talk between ABA, Ca2+, ethylene and phosphoinositide mediated signaling pathways. We also highlighted the phosphorylation of HOS1, APX and PIP2 might be associated with response to chilling stress in J. curcas seedling. These results will be valuable for further study from the molecular breeding perspective.
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68
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Gao Y, Zhang G. A calcium sensor calcineurin B-like 9 negatively regulates cold tolerance via calcium signaling in Arabidopsis thaliana. PLANT SIGNALING & BEHAVIOR 2019; 14:e1573099. [PMID: 30696338 PMCID: PMC6422375 DOI: 10.1080/15592324.2019.1573099] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Calcineurin B-like protein 9 (CBL9) plays important roles in response to ABA, K+ deprivation in plants. However, whether CBL9 modulates plant adaptation to low-temperature stress is elusive. In this study, we demonstrated that the cbl9 mutants increased freezing tolerance under both cold-acclimating and nonacclimating conditions in Arabidopsis. Cold-induced changes of cytosolic free calcium concentration ([Ca2+]cyt) were then monitored by aequorin-expressed Arabidopsis plants. The results showed that the cold-triggered increases in [Ca2+]cyt levels in cbl9 mutants were clearly higher than those in wild type (WT) plants, while cold-affected changes in free calcium concentration within cytosolic microdomains adjacent to the vacuolar membrane ([Ca2+]md) in cbl9 mutants were similar to those in WT plants. In addition, treatments of seedlings with Ca2+ chelator ethylene glycol-bis(2-aminoethylether)-N,N,N',N'-tetraacetic acid (EGTA) and Ca2+ channel blocker lanthanum chloride markedly inhibit changes of [Ca2+]cyt in cbl9 mutants, while the inhibition of calcium release by lithium chloride from intracellular pools demonstrated consistent suppression of [Ca2+]cyt in cbl9 mutants and WT plants. Together, these results indicate that CBL9 negatively modulates cold tolerance through decreasing [Ca2+]cyt in Arabidopsis.
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Affiliation(s)
- Yuanlin Gao
- State Key Laboratory of Cotton Biology, Henan Key Laboratory of Plant Stress Biology, Institute of Nursing and Health, Henan University, Kaifeng, China
| | - Guozeng Zhang
- State Key Laboratory of Cotton Biology, Henan Key Laboratory of Plant Stress Biology, Institute of Nursing and Health, Henan University, Kaifeng, China
- CONTACT Guozeng Zhang State Key Laboratory of Cotton Biology, Henan Key Laboratory of Plant Stress Biology, Institute of Nursing and Health, Henan University, Kaifeng, China
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69
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Wang PH, Lee CE, Lin YS, Lee MH, Chen PY, Chang HC, Chang IF. The Glutamate Receptor-Like Protein GLR3.7 Interacts With 14-3-3ω and Participates in Salt Stress Response in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2019; 10:1169. [PMID: 31632419 PMCID: PMC6779109 DOI: 10.3389/fpls.2019.01169] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2019] [Accepted: 08/27/2019] [Indexed: 05/19/2023]
Abstract
Ionotropic glutamate receptors (iGluRs) are ligand-gated cation channels that mediate fast excitatory neurotransmission in the mammalian central nervous system. In the model plant Arabidopsis thaliana, a family of 20 glutamate receptor-like proteins (GLRs) shares similarities to animal iGluRs in sequence and predicted secondary structure. However, the function of GLRs in plants is little known. In the present study, a serine site (Ser-860) of AtGLR3.7 phosphorylated by a calcium-dependent protein kinase (CDPK) was identified and confirmed by an in vitro kinase assay. Using a bimolecular fluorescence complementation and quartz crystal microbalance analyses, the physical interaction between AtGLR3.7 and the 14-3-3ω protein was confirmed. The mutation of Ser-860 to alanine abolished this interaction, indicating that Ser-860 is the 14-3-3ω binding site of AtGLR3.7. Compared with wild type, seed germination of the glr3.7-2 mutant was more sensitive to salt stress. However, the primary root growth of GLR3.7-S860A overexpression lines was less sensitive to salt stress than that of the wild-type line. In addition, the increase of cytosolic calcium ion concentration by salt stress was significantly lower in the glr3.7-2 mutant line than in the wild-type line. Moreover, association of 14-3-3 proteins to microsomal fractions was less in GLR3.7-S860A overexpression lines than in GLR3.7 overexpression line under 150 mM NaCl salt stress condition. Overall, our results indicated that GLR3.7 is involved in salt stress response in A. thaliana by affecting calcium signaling.
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Affiliation(s)
- Po-Hsun Wang
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Cheng-En Lee
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Yi-Sin Lin
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Man-Hsuan Lee
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Pei-Yuan Chen
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Hui-Chun Chang
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Ing-Feng Chang
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
- Department of Life Science, National Taiwan University, Taipei, Taiwan
- Genome and Systems Biology Degree Program, National Taiwan University and Academia Sinica, Taipei, Taiwan
- *Correspondence: Ing-Feng Chang,
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70
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Calcium Signaling-Mediated Plant Response to Cold Stress. Int J Mol Sci 2018; 19:ijms19123896. [PMID: 30563125 PMCID: PMC6320992 DOI: 10.3390/ijms19123896] [Citation(s) in RCA: 86] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2018] [Revised: 11/27/2018] [Accepted: 11/29/2018] [Indexed: 01/02/2023] Open
Abstract
Low temperatures have adverse impacts on plant growth, developmental processes, crop productivity and food quality. It is becoming clear that Ca2+ signaling plays a crucial role in conferring cold tolerance in plants. However, the role of Ca2+ involved in cold stress response needs to be further elucidated. Recent studies have shown how the perception of cold signals regulate Ca2+ channels to induce Ca2+ transients. In addition, studies have shown how Ca2+ signaling and its cross-talk with nitric oxide (NO), reactive oxygen species (ROS) and mitogen-activated protein kinases (MAPKs) signaling pathways ultimately lead to establishing cold tolerance in plants. Ca2+ signaling also plays a key role through Ca2+/calmodulin-mediated Arabidopsis signal responsive 1 (AtSR1/CAMTA3) when temperatures drop rapidly. This review highlights the current status in Ca2+ signaling-mediated cold tolerance in plants.
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71
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Wang X, Hao L, Zhu B, Jiang Z. Plant Calcium Signaling in Response to Potassium Deficiency. Int J Mol Sci 2018; 19:E3456. [PMID: 30400321 PMCID: PMC6275041 DOI: 10.3390/ijms19113456] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2018] [Revised: 10/19/2018] [Accepted: 11/01/2018] [Indexed: 01/23/2023] Open
Abstract
Potassium (K⁺) is an essential macronutrient of living cells and is the most abundant cation in the cytosol. K⁺ plays a role in several physiological processes that support plant growth and development. However, soil K⁺ availability is very low and variable, which leads to severe reductions in plant growth and yield. Various K⁺ shortage-activated signaling cascades exist. Among these, calcium signaling is the most important signaling system within plant cells. This review is focused on the possible roles of calcium signaling in plant responses to low-K⁺ stress. In plants, intracellular calcium levels are first altered in response to K⁺ deficiency, resulting in calcium signatures that exhibit temporal and spatial features. In addition, calcium channels located within the root epidermis and root hair zone can then be activated by hyperpolarization of plasma membrane (PM) in response to low-K⁺ stress. Afterward, calcium sensors, including calmodulin (CaM), CaM-like protein (CML), calcium-dependent protein kinase (CDPK), and calcineurin B-like protein (CBL), can act in the sensing of K⁺ deprivation. In particular, the important components regarding CBL/CBL-interacting protein kinase (CBL/CIPK) complexes-involved in plant responses to K⁺ deficiency are also discussed.
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Affiliation(s)
- Xiaoping Wang
- Shenzhen Key Laboratory of Marine Bioresource & Eco-environmental Science, Guangdong Engineering Research Center for Marine Algal Biotechnology, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China.
- Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China.
| | - Ling Hao
- Shenzhen Key Laboratory of Marine Bioresource & Eco-environmental Science, Guangdong Engineering Research Center for Marine Algal Biotechnology, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China.
- Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China.
| | - Biping Zhu
- Shenzhen Key Laboratory of Marine Bioresource & Eco-environmental Science, Guangdong Engineering Research Center for Marine Algal Biotechnology, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China.
| | - Zhonghao Jiang
- Shenzhen Key Laboratory of Marine Bioresource & Eco-environmental Science, Guangdong Engineering Research Center for Marine Algal Biotechnology, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China.
- Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China.
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72
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Tran D, Dauphin A, Meimoun P, Kadono T, Nguyen HTH, Arbelet-Bonnin D, Zhao T, Errakhi R, Lehner A, Kawano T, Bouteau F. Methanol induces cytosolic calcium variations, membrane depolarization and ethylene production in arabidopsis and tobacco. ANNALS OF BOTANY 2018; 122:849-860. [PMID: 29579139 PMCID: PMC6215043 DOI: 10.1093/aob/mcy038] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2017] [Accepted: 03/05/2018] [Indexed: 05/20/2023]
Abstract
Background and Aims Methanol is a volatile organic compound released from plants through the action of pectin methylesterases (PMEs), which demethylesterify cell wall pectins. Plant PMEs play a role in developmental processes but also in responses to herbivory and infection by fungal or bacterial pathogens. However, molecular mechanisms that explain how methanol could affect plant defences remain poorly understood. Methods Using cultured cells and seedlings from Arabidopsis thaliana and tobacco BY2 expressing the apoaequorin gene, allowing quantification of cytosolic Ca2+, a reactive oxygen species (ROS) probe (CLA, Cypridina luciferin analogue) and electrophysiological techniques, we followed early plant cell responses to exogenously supplied methanol applied as a liquid or as volatile. Key Results Methanol induces cytosolic Ca2+ variations that involve Ca2+ influx through the plasma membrane and Ca2+ release from internal stores. Our data further suggest that these Ca2+ variations could interact with different ROS and support a signalling pathway leading to well known plant responses to pathogens such as plasma membrane depolarization through anion channel regulation and ethylene synthesis. Conclusions Methanol is not only a by-product of PME activities, and our data suggest that [Ca2+]cyt variations could participate in signalling processes induced by methanol upstream of plant defence responses.
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Affiliation(s)
- Daniel Tran
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
- Department of Physiology & Cell Information Systems Group, McGill University, Montréal, Québec, Canada
| | - Aurélien Dauphin
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
- Institut Curie, CNRS UMR3215, INSERM U934, Paris, France
| | - Patrice Meimoun
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
- Sorbonne Université, UMR7622–IBPS, Paris, France
| | - Takashi Kadono
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
- Laboratory of Aquatic Environmental Science, Kochi University, Kochi, Japan
| | - Hieu T H Nguyen
- Graduate School of Environmental Engineering, University of Kitakyushu, Wakamatsu-ku, Kitakyushu, Japan
| | - Delphine Arbelet-Bonnin
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
| | - Tingting Zhao
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
| | - Rafik Errakhi
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
- Eurofins Agriscience Service, Marocco
| | - Arnaud Lehner
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
- Normandie Université, UNIROUEN, Laboratoire de Glycobiologie et Matrice Extracellulaire Végétale, EA4358, SFR Normandie végétal, Rouen, France
| | - Tomonori Kawano
- Graduate School of Environmental Engineering, University of Kitakyushu, Wakamatsu-ku, Kitakyushu, Japan
- LINV Kitakyushu Research Center, Kitakyushu, Japan
- Université Paris Diderot, Sorbonne Paris Cité, Paris Interdisciplinary Energy Research Institute (PIERI), Paris, France
| | - François Bouteau
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
- LINV Kitakyushu Research Center, Kitakyushu, Japan
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73
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Cold exposure causes cell death by depolarization-mediated Ca 2+ overload in a chill-susceptible insect. Proc Natl Acad Sci U S A 2018; 115:E9737-E9744. [PMID: 30254178 DOI: 10.1073/pnas.1813532115] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Cold tolerance of insects is arguably among the most important traits defining their geographical distribution. Even so, very little is known regarding the causes of cold injury in this species-rich group. In many insects it has been observed that cold injury coincides with a cellular depolarization caused by hypothermia and hyperkalemia that develop during chronic cold exposure. However, prior studies have been unable to determine if cold injury is caused by direct effects of hypothermia, by toxic effects of hyperkalemia, or by the depolarization that is associated with these perturbations. Here we use a fluorescent DNA-staining method to estimate cell viability of muscle and hindgut tissue from Locusta migratoria and show that the cellular injury is independent of the direct effects of hypothermia or toxic effects of hyperkalemia. Instead, we show that chill injury develops due to the associated cellular depolarization. We further hypothesized that the depolarization-induced injury was caused by opening of voltage-sensitive Ca2+ channels, causing a Ca2+ overload that triggers apoptotic/necrotic pathways. In accordance with this hypothesis, we show that hyperkalemic depolarization causes a marked increase in intracellular Ca2+ levels. Furthermore, using pharmacological manipulation of intra- and extracellular Ca2+ concentrations as well as Ca2+ channel conductance, we demonstrate that injury is prevented if transmembrane Ca2+ flux is prevented by removing extracellular Ca2+ or blocking Ca2+ influx. Together these findings demonstrate a causal relationship between cold-induced hyperkalemia, depolarization, and the development of chill injury through Ca2+-mediated necrosis/apoptosis.
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74
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Abstract
Bacterial pathogens cause plant diseases that threaten the global food supply. To control diseases, it is important to understand how pathogenic bacteria evade plant defense and promote infection. We identify from the phytopathogen Pseudomonas syringae a small-molecule virulence factor—phevamine A. Both the chemical structure and mode of action of phevamine A are different from known bacterial phytotoxins. Phevamine A promotes bacterial growth by suppressing plant immune responses, including both early (the generation of reactive oxygen species) and late (the deposition of cell wall reinforcing callose in leaves and leaf cell death) markers. This work uncovers a widely distributed, small-molecule virulence factor and shows the power of a multidisciplinary approach to identify small molecules important for plant infection. Bacterial plant pathogens cause significant crop damage worldwide. They invade plant cells by producing a variety of virulence factors, including small-molecule toxins and phytohormone mimics. Virulence of the model pathogen Pseudomonas syringae pv. tomato DC3000 (Pto) is regulated in part by the sigma factor HrpL. Our study of the HrpL regulon identified an uncharacterized, three-gene operon in Pto that is controlled by HrpL and related to the Erwinia hrp-associated systemic virulence (hsv) operon. Here, we demonstrate that the hsv operon contributes to the virulence of Pto on Arabidopsis thaliana and suppresses bacteria-induced immune responses. We show that the hsv-encoded enzymes in Pto synthesize a small molecule, phevamine A. This molecule consists of l-phenylalanine, l-valine, and a modified spermidine, and is different from known small molecules produced by phytopathogens. We show that phevamine A suppresses a potentiation effect of spermidine and l-arginine on the reactive oxygen species burst generated upon recognition of bacterial flagellin. The hsv operon is found in the genomes of divergent bacterial genera, including ∼37% of P. syringae genomes, suggesting that phevamine A is a widely distributed virulence factor in phytopathogens. Our work identifies a small-molecule virulence factor and reveals a mechanism by which bacterial pathogens overcome plant defense. This work highlights the power of omics approaches in identifying important small molecules in bacteria–host interactions.
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75
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Guo X, Liu D, Chong K. Cold signaling in plants: Insights into mechanisms and regulation. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2018; 60:745-756. [PMID: 30094919 DOI: 10.1111/jipb.12706] [Citation(s) in RCA: 240] [Impact Index Per Article: 40.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Accepted: 08/08/2018] [Indexed: 05/18/2023]
Abstract
To survive under cold temperatures plants must be able to perceive a cold signal and transduce it into downstream components that induce appropriate defense mechanisms. In addition to inducing adaptive defenses, such as the production of osmotic factors to prevent freezing and the reprogramming of transcriptional pathways, cold temperatures induce changes in plant growth and development which can affect the plant life cycle. In this review, we summarize recent progress in characterizing cold-related genes and the pathways that allow transduction of the cold signal in plants, focusing primarily on studies in Arabidopsis thaliana and rice (Oryza sativa). We summarize cold perception and signal transduction from the plasma membrane to the nucleus, which involves cold sensors, calcium signals, calcium-binding proteins, mitogen-activated protein kinase cascades, and the C-repeat binding factor/dehydration-responsive element binding pathways, as well as trehalose metabolism. Finally, we describe the balance between plant organogenesis and cold tolerance mechanisms in rice. This review encapsulates the known cold signaling factors in plants and provides perspectives for ongoing cold signaling research.
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Affiliation(s)
- Xiaoyu Guo
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Dongfeng Liu
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China
| | - Kang Chong
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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76
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Liu J, Shi Y, Yang S. Insights into the regulation of C-repeat binding factors in plant cold signaling. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2018; 60:780-795. [PMID: 29667328 DOI: 10.1111/jipb.12657] [Citation(s) in RCA: 101] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2018] [Accepted: 04/16/2018] [Indexed: 05/02/2023]
Abstract
Cold temperatures, a major abiotic stress, threaten the growth and development of plants, worldwide. To cope with this adverse environmental cue, plants from temperate climates have evolved an array of sophisticated mechanisms to acclimate to cold periods, increasing their ability to tolerate freezing stress. Over the last decade, significant progress has been made in determining the molecular mechanisms underpinning cold acclimation, including following the identification of several pivotal components, including candidates for cold sensors, protein kinases, and transcription factors. With these developments, we have a better understanding of the CBF-dependent cold-signaling pathway. In this review, we summarize recent progress made in elucidating the cold-signaling pathways, especially the C-repeat binding factor-dependent pathway, and describe the regulatory function of the crucial components of plant cold signaling. We also discuss the unsolved questions that should be the focus of future work.
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Affiliation(s)
- Jingyan Liu
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China
- Crops Research Institute, Tianjin Academy of Agricultural Sciences, Tianjin 300384, China
| | - Yiting Shi
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China
| | - Shuhua Yang
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China
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77
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Edel KH, Marchadier E, Brownlee C, Kudla J, Hetherington AM. The Evolution of Calcium-Based Signalling in Plants. Curr Biol 2018; 27:R667-R679. [PMID: 28697370 DOI: 10.1016/j.cub.2017.05.020] [Citation(s) in RCA: 145] [Impact Index Per Article: 24.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The calcium-based intracellular signalling system is used ubiquitously to couple extracellular stimuli to their characteristic intracellular responses. It is becoming clear from genomic and physiological investigations that while the basic elements in the toolkit are common between plants and animals, evolution has acted in such a way that, in plants, some components have diversified with respect to their animal counterparts, while others have either been lost or have never evolved in the plant lineages. In comparison with animals, in plants there appears to have been a loss of diversity in calcium-influx mechanisms at the plasma membrane. However, the evolution of the calcium-storing vacuole may provide plants with additional possibilities for regulating calcium influx into the cytosol. Among the proteins that are involved in sensing and responding to increases in calcium, plants possess specific decoder proteins that are absent from the animal lineage. In seeking to understand the selection pressures that shaped the plant calcium-signalling toolkit, we consider the evolution of fast electrical signalling. We also note that, in contrast to animals, plants apparently do not make extensive use of cyclic-nucleotide-based signalling. It is possible that reliance on a single intracellular second-messenger-based system, coupled with the requirement to adapt to changing environmental conditions, has helped to define the diversity of components found in the extant plant calcium-signalling toolkit.
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Affiliation(s)
- Kai H Edel
- Institut für Biologie und Biotechnologie der Pflanzen, Universität Münster, Schlossplatz 7, 48149 Münster, Germany
| | - Elodie Marchadier
- School of Biological Sciences, Life Sciences Building, University of Bristol, Tyndall Avenue, Bristol BS8 1TQ, UK; Génétique Quantitative et Evolution - Le Moulon, INRA, Univ. Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, 91190 Gif-sur-Yvette, France
| | - Colin Brownlee
- Marine Biological Association of the UK, The Laboratory, Citadel Hill, Plymouth PL1 2PB, UK; School of Ocean and Earth Sciences, University of Southampton, Southampton, SO14 3ZH, UK
| | - Jörg Kudla
- Institut für Biologie und Biotechnologie der Pflanzen, Universität Münster, Schlossplatz 7, 48149 Münster, Germany
| | - Alistair M Hetherington
- School of Biological Sciences, Life Sciences Building, University of Bristol, Tyndall Avenue, Bristol BS8 1TQ, UK.
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78
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GhKLCR1, a kinesin light chain-related gene, induces drought-stress sensitivity in Arabidopsis. SCIENCE CHINA-LIFE SCIENCES 2018; 62:63-75. [PMID: 29987502 DOI: 10.1007/s11427-018-9307-y] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2018] [Accepted: 03/10/2018] [Indexed: 10/28/2022]
Abstract
Drought stress results in significant losses in agricultural production, and especially that of cotton. The molecular mechanisms that coordinate drought tolerance remain elusive in cotton. Here, we isolated a drought-response gene GhKLCR1, which is a close homolog of AtKLCR1, which encodes a kinesin light chain-related protein enriched with a tetratrico peptide-repeat region. A subcellular localization assay showed that GhKLCR1 is associated with the cell membrane. A tissue-specific expression profile analysis demonstrated that GhKLCR1 is a cotton root-specific gene. Further abiotic and hormonal stress treatments showed that GhKLCR1 was upregulated during abiotic stresses, especially after polyethylene glycol treatments. In addition, the glucuronidase (GUS) staining activity increased as the increment of mannitol concentration in transgenic Arabidopsis plants harboring the fusion construct PGhKLCR1::GUS. The root lengths of 35S::GhKLCR1 lines were significantly reduced compared with that of wild type. Additionally, seed germination was strongly inhibited in 35S::GhKLCR1 lines after 300-mmol L-1 mannitol treatments as compared with Columbia-0, indicating the sensitivity of GhKLCR1 to drought. These findings provide a better understanding of the structural, physiological and functional mechanisms of kinesin light chain-related proteins.
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79
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Wu T, Ye Z, Guo L, Yang X, Lin J. De novo transcriptome sequencing of Flammulina velutipes uncover candidate genes associated with cold-induced fruiting. J Basic Microbiol 2018; 58:698-703. [PMID: 29873407 DOI: 10.1002/jobm.201800037] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Revised: 05/05/2018] [Accepted: 05/12/2018] [Indexed: 11/05/2022]
Abstract
To understand molecular mechanism of cold-induced fruiting in Flammulina velutipes, which is one of most popular edible fungi in east Asia, de novo assembly of the F. velutipes transcriptome was carried out. There were 26,888,494 and 26,275,146 clean reads obtained from mycelium and primordia of F. velutipes, respectively. A total of 20,157 unigenes were de novo assembled and 15,058 of them were annotated. Moreover, 7935 unigenes were differentially expressed between mycelium and primordia, 4025 of them were up-regulated and 3910 were down-regulated. GO and KEGG pathway analysis of the differentially expressed unigenes indicated that functional groups associated with two-component signaling pathway, calcium signaling, mitogen-actived protein kinase pathway, molecular chaperones, cell wall and membrane system, play an important role in cold-induced fruiting of F. velutipes. In this work 643 EST-SSRs were identified in 20,157 unigenes and 1560 EST-SSRs primers pairs were designed. Moreover, 5548 and 5955 SNPs were detected in mycelium and primordia, respectively. Consequently, results of this work can serve as a valuable resource for functional genomics study of cold-induced fruiting in F. velutipes.
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Affiliation(s)
- Tuheng Wu
- College of Food Science and Institute of Food Biotechnology, South China Agricultural University, Guangzhou, P.R. China.,Research Center for Micro-Ecological Agent Engineering and Technology of Guangdong Province, Guangzhou, P.R. China
| | - Zhiwei Ye
- College of Food Science and Institute of Food Biotechnology, South China Agricultural University, Guangzhou, P.R. China.,Research Center for Micro-Ecological Agent Engineering and Technology of Guangdong Province, Guangzhou, P.R. China
| | - Liqiong Guo
- College of Food Science and Institute of Food Biotechnology, South China Agricultural University, Guangzhou, P.R. China.,Research Center for Micro-Ecological Agent Engineering and Technology of Guangdong Province, Guangzhou, P.R. China
| | - Xueqin Yang
- College of Food Science and Institute of Food Biotechnology, South China Agricultural University, Guangzhou, P.R. China.,Research Center for Micro-Ecological Agent Engineering and Technology of Guangdong Province, Guangzhou, P.R. China
| | - Junfang Lin
- College of Food Science and Institute of Food Biotechnology, South China Agricultural University, Guangzhou, P.R. China.,Research Center for Micro-Ecological Agent Engineering and Technology of Guangdong Province, Guangzhou, P.R. China
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80
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Park J, Lim CJ, Shen M, Park HJ, Cha JY, Iniesto E, Rubio V, Mengiste T, Zhu JK, Bressan RA, Lee SY, Lee BH, Jin JB, Pardo JM, Kim WY, Yun DJ. Epigenetic switch from repressive to permissive chromatin in response to cold stress. Proc Natl Acad Sci U S A 2018; 115:E5400-E5409. [PMID: 29784800 PMCID: PMC6003311 DOI: 10.1073/pnas.1721241115] [Citation(s) in RCA: 113] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Abstract
Switching from repressed to active status in chromatin regulation is part of the critical responses that plants deploy to survive in an ever-changing environment. We previously reported that HOS15, a WD40-repeat protein, is involved in histone deacetylation and cold tolerance in Arabidopsis However, it remained unknown how HOS15 regulates cold responsive genes to affect cold tolerance. Here, we show that HOS15 interacts with histone deacetylase 2C (HD2C) and both proteins together associate with the promoters of cold-responsive COR genes, COR15A and COR47 Cold induced HD2C degradation is mediated by the CULLIN4 (CUL4)-based E3 ubiquitin ligase complex in which HOS15 acts as a substrate receptor. Interference with the association of HD2C and the COR gene promoters by HOS15 correlates with increased acetylation levels of histone H3. HOS15 also interacts with CBF transcription factors to modulate cold-induced binding to the COR gene promoters. Our results here demonstrate that cold induces HOS15-mediated chromatin modifications by degrading HD2C. This switches the chromatin structure status and facilitates recruitment of CBFs to the COR gene promoters. This is an apparent requirement to acquire cold tolerance.
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Affiliation(s)
- Junghoon Park
- Department of Biomedical Science and Engineering, Konkuk University, 05029 Seoul, South Korea
- Division of Applied Life Science (BK21 plus Program), Plant Molecular Biology and Biotechnology Research Center, Institute of Agriculture and Life Science, Gyeongsang National University, 52828 Jinju, Republic of Korea
| | - Chae Jin Lim
- Department of Biomedical Science and Engineering, Konkuk University, 05029 Seoul, South Korea
- Division of Applied Life Science (BK21 plus Program), Plant Molecular Biology and Biotechnology Research Center, Institute of Agriculture and Life Science, Gyeongsang National University, 52828 Jinju, Republic of Korea
| | - Mingzhe Shen
- Division of Applied Life Science (BK21 plus Program), Plant Molecular Biology and Biotechnology Research Center, Institute of Agriculture and Life Science, Gyeongsang National University, 52828 Jinju, Republic of Korea
| | - Hee Jin Park
- Department of Biomedical Science and Engineering, Konkuk University, 05029 Seoul, South Korea
- Institute of Glocal Disease Control, Konkuk University, 05029 Seoul, Republic of Korea
| | - Joon-Yung Cha
- Division of Applied Life Science (BK21 plus Program), Plant Molecular Biology and Biotechnology Research Center, Institute of Agriculture and Life Science, Gyeongsang National University, 52828 Jinju, Republic of Korea
| | - Elisa Iniesto
- Plant Molecular Genetics Department, Centro Nacional de Biotecnología-Consejo Superior de Investigaciones Cientificas, Campus de la Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain
| | - Vicente Rubio
- Plant Molecular Genetics Department, Centro Nacional de Biotecnología-Consejo Superior de Investigaciones Cientificas, Campus de la Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain
| | - Tesfaye Mengiste
- Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN 47907
| | - Jian-Kang Zhu
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907
| | - Ray A Bressan
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907
| | - Sang Yeol Lee
- Division of Applied Life Science (BK21 plus Program), Plant Molecular Biology and Biotechnology Research Center, Institute of Agriculture and Life Science, Gyeongsang National University, 52828 Jinju, Republic of Korea
| | - Byeong-Ha Lee
- Department of Life Science, Sogang University, 04107 Seoul, South Korea
| | - Jing Bo Jin
- Institute of Botany, Chinese Academy of Sciences, 100093 Beijing, China
| | - Jose M Pardo
- Institute of Plant Biochemistry and Photosynthesis, Consejo Superior de Investigaciones Cientificas, 41092 Seville, Spain
| | - Woe-Yeon Kim
- Division of Applied Life Science (BK21 plus Program), Plant Molecular Biology and Biotechnology Research Center, Institute of Agriculture and Life Science, Gyeongsang National University, 52828 Jinju, Republic of Korea
| | - Dae-Jin Yun
- Department of Biomedical Science and Engineering, Konkuk University, 05029 Seoul, South Korea;
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81
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Sello S, Moscatiello R, Mehlmer N, Leonardelli M, Carraretto L, Cortese E, Zanella FG, Baldan B, Szabò I, Vothknecht UC, Navazio L. Chloroplast Ca 2+ Fluxes into and across Thylakoids Revealed by Thylakoid-Targeted Aequorin Probes. PLANT PHYSIOLOGY 2018; 177:38-51. [PMID: 29559589 PMCID: PMC5933129 DOI: 10.1104/pp.18.00027] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2018] [Accepted: 03/05/2018] [Indexed: 05/18/2023]
Abstract
Chloroplasts require a fine-tuned control of their internal Ca2+ concentration, which is crucial for many aspects of photosynthesis and for other chloroplast-localized processes. Increasing evidence suggests that calcium regulation within chloroplasts also may influence Ca2+ signaling pathways in the cytosol. To investigate the involvement of thylakoids in Ca2+ homeostasis and in the modulation of chloroplast Ca2+ signals in vivo, we targeted the bioluminescent Ca2+ reporter aequorin as a YFP fusion to the lumen and the stromal surface of thylakoids in Arabidopsis (Arabidopsis thaliana). Thylakoid localization of aequorin-based probes in stably transformed lines was confirmed by confocal microscopy, immunogold labeling, and biochemical analyses. In resting conditions in the dark, free Ca2+ levels in the thylakoid lumen were maintained at about 0.5 μm, which was a 3- to 5-fold higher concentration than in the stroma. Monitoring of chloroplast Ca2+ dynamics in different intrachloroplast subcompartments (stroma, thylakoid membrane, and thylakoid lumen) revealed the occurrence of stimulus-specific Ca2+ signals, characterized by unique kinetic parameters. Oxidative and salt stresses initiated pronounced free Ca2+ changes in the thylakoid lumen. Localized Ca2+ increases also were observed on the thylakoid membrane surface, mirroring transient Ca2+ changes observed for the bulk stroma, but with specific Ca2+ dynamics. Moreover, evidence was obtained for dark-stimulated intrathylakoid Ca2+ changes, suggesting a new scenario for light-to-dark-induced Ca2+ fluxes inside chloroplasts. Hence, thylakoid-targeted aequorin reporters can provide new insights into chloroplast Ca2+ storage and signal transduction. These probes represent novel tools with which to investigate the role of thylakoids in Ca2+ signaling networks within chloroplasts and plant cells.
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Affiliation(s)
- Simone Sello
- Department of Biology, University of Padova, 35131 Padova, Italy
| | | | - Norbert Mehlmer
- Department of Biology I, Faculty of Biology, LMU Munich, D-82152 Munich, Germany
| | - Manuela Leonardelli
- Department of Biology, University of Padova, 35131 Padova, Italy
- Department of Biology I, Faculty of Biology, LMU Munich, D-82152 Munich, Germany
| | - Luca Carraretto
- Department of Biology, University of Padova, 35131 Padova, Italy
| | - Enrico Cortese
- Department of Biology, University of Padova, 35131 Padova, Italy
| | | | - Barbara Baldan
- Department of Biology, University of Padova, 35131 Padova, Italy
- Botanical Garden, University of Padova, 35123 Padova, Italy
| | - Ildikò Szabò
- Department of Biology, University of Padova, 35131 Padova, Italy
- Botanical Garden, University of Padova, 35123 Padova, Italy
| | - Ute C Vothknecht
- Department of Biology I, Faculty of Biology, LMU Munich, D-82152 Munich, Germany
- Plant Cell Biology, Institute of Cellular and Molecular Botany, University of Bonn, Kirschallee 1, D-53115 Bonn, Germany
| | - Lorella Navazio
- Department of Biology, University of Padova, 35131 Padova, Italy
- Botanical Garden, University of Padova, 35123 Padova, Italy
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82
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Lenzoni G, Liu J, Knight MR. Predicting plant immunity gene expression by identifying the decoding mechanism of calcium signatures. THE NEW PHYTOLOGIST 2018; 217:1598-1609. [PMID: 29218709 DOI: 10.1111/nph.14924] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2017] [Accepted: 10/25/2017] [Indexed: 05/28/2023]
Abstract
Calcium plays a key role in determining the specificity of a vast array of signalling pathways in plants. Cellular calcium elevations with different characteristics (calcium signatures) carry information on the identity of the primary stimulus, ensuring appropriate downstream responses. However, the mechanism for decoding calcium signatures is unknown. To determine this, decoding of the salicylic acid (SA)-mediated plant immunity signalling network controlling gene expression was examined. A dynamic mathematical model of the SA-mediated plant immunity network was developed. This model was used to predict responses to different calcium signatures; these were validated empirically using quantitative real-time PCR to measure gene expression. The mechanism for decoding calcium signatures to control expression of plant immunity genes enhanced disease susceptibility 1 (EDS1) and isochorismate synthase 1 (ICS1) was identified. Calcium, calmodulin, calmodulin-binding transcription activators (CAMTA)3 and calmodulin binding protein 60g (CBP60g) together amplify each calcium signature into three active signals, simultaneously regulating expression. The time required for calcium to return to steady-state level also quantitatively regulates gene expression. Decoding of calcium signatures occurs via nonlinear interactions between these active signals, producing a unique response in each case. Key properties of the calcium signatures are not intuitive, exemplifying the importance of mathematical modelling approaches. This approach can be applied to identifying the decoding mechanisms of other plant calcium signalling pathways.
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Affiliation(s)
- Gioia Lenzoni
- Department of Biosciences, Durham University, South Road, Durham, DH1 3LE, UK
| | - Junli Liu
- Department of Biosciences, Durham University, South Road, Durham, DH1 3LE, UK
| | - Marc R Knight
- Department of Biosciences, Durham University, South Road, Durham, DH1 3LE, UK
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83
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Zhang H, Hu Z, Lei C, Zheng C, Wang J, Shao S, Li X, Xia X, Cai X, Zhou J, Zhou Y, Yu J, Foyer CH, Shi K. A Plant Phytosulfokine Peptide Initiates Auxin-Dependent Immunity through Cytosolic Ca 2+ Signaling in Tomato. THE PLANT CELL 2018; 30:652-667. [PMID: 29511053 PMCID: PMC5894845 DOI: 10.1105/tpc.17.00537] [Citation(s) in RCA: 88] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2017] [Revised: 01/11/2018] [Accepted: 03/01/2018] [Indexed: 05/15/2023]
Abstract
Phytosulfokine (PSK) is a disulfated pentapeptide that is an important signaling molecule. Although it has recently been implicated in plant defenses to pathogen infection, the mechanisms involved remain poorly understood. Using surface plasmon resonance and gene silencing approaches, we showed that the tomato (Solanum lycopersicum) PSK receptor PSKR1, rather than PSKR2, functioned as the major PSK receptor in immune responses. Silencing of PSK signaling genes rendered tomato more susceptible to infection by the economically important necrotrophic pathogen Botrytis cinerea Analysis of tomato mutants defective in either defense hormone biosynthesis or signaling demonstrated that PSK-induced immunity required auxin biosynthesis and associated defense pathways. Here, using aequorin-expressing tomato plants, we provide evidence that PSK perception by tomato PSKR1 elevated cytosolic [Ca2+], leading to auxin-dependent immune responses via enhanced binding activity between calmodulins and the auxin biosynthetic YUCs. Thus, our data demonstrate that PSK acts as a damage-associated molecular pattern and is perceived mainly by PSKR1, which increases cytosolic [Ca2+] and activates auxin-mediated pathways that enhance immunity of tomato plants to B. cinerea.
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Affiliation(s)
- Huan Zhang
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Zhangjian Hu
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Cui Lei
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Chenfei Zheng
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Jiao Wang
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Shujun Shao
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
- Key Laboratory of Horticultural Plants Growth, Development and Quality Improvement, Agricultural Ministry of China, Hangzhou 310058, P.R. China
| | - Xin Li
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
- Key Laboratory of Tea Biology and Resources Utilization, Ministry of Agriculture, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310008, P.R. China
| | - Xiaojian Xia
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Xinzhong Cai
- Institute of Biotechnology, Zhejiang University, Hangzhou 310058, P.R. China
| | - Jie Zhou
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Yanhong Zhou
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Jingquan Yu
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
- Key Laboratory of Horticultural Plants Growth, Development and Quality Improvement, Agricultural Ministry of China, Hangzhou 310058, P.R. China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, Hangzhou 310058, P.R. China
| | - Christine H Foyer
- Centre for Plant Sciences, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom
| | - Kai Shi
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
- Key Laboratory of Horticultural Plants Growth, Development and Quality Improvement, Agricultural Ministry of China, Hangzhou 310058, P.R. China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, Hangzhou 310058, P.R. China
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84
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Zhang H, Hu Z, Lei C, Zheng C, Wang J, Shao S, Li X, Xia X, Cai X, Zhou J, Zhou Y, Yu J, Foyer CH, Shi K. A Plant Phytosulfokine Peptide Initiates Auxin-Dependent Immunity through Cytosolic Ca 2+ Signaling in Tomato. THE PLANT CELL 2018. [PMID: 29511053 DOI: 10.1105/tpc.1700537] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Phytosulfokine (PSK) is a disulfated pentapeptide that is an important signaling molecule. Although it has recently been implicated in plant defenses to pathogen infection, the mechanisms involved remain poorly understood. Using surface plasmon resonance and gene silencing approaches, we showed that the tomato (Solanum lycopersicum) PSK receptor PSKR1, rather than PSKR2, functioned as the major PSK receptor in immune responses. Silencing of PSK signaling genes rendered tomato more susceptible to infection by the economically important necrotrophic pathogen Botrytis cinerea Analysis of tomato mutants defective in either defense hormone biosynthesis or signaling demonstrated that PSK-induced immunity required auxin biosynthesis and associated defense pathways. Here, using aequorin-expressing tomato plants, we provide evidence that PSK perception by tomato PSKR1 elevated cytosolic [Ca2+], leading to auxin-dependent immune responses via enhanced binding activity between calmodulins and the auxin biosynthetic YUCs. Thus, our data demonstrate that PSK acts as a damage-associated molecular pattern and is perceived mainly by PSKR1, which increases cytosolic [Ca2+] and activates auxin-mediated pathways that enhance immunity of tomato plants to B. cinerea.
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Affiliation(s)
- Huan Zhang
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Zhangjian Hu
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Cui Lei
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Chenfei Zheng
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Jiao Wang
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Shujun Shao
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
- Key Laboratory of Horticultural Plants Growth, Development and Quality Improvement, Agricultural Ministry of China, Hangzhou 310058, P.R. China
| | - Xin Li
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
- Key Laboratory of Tea Biology and Resources Utilization, Ministry of Agriculture, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310008, P.R. China
| | - Xiaojian Xia
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Xinzhong Cai
- Institute of Biotechnology, Zhejiang University, Hangzhou 310058, P.R. China
| | - Jie Zhou
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Yanhong Zhou
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
| | - Jingquan Yu
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
- Key Laboratory of Horticultural Plants Growth, Development and Quality Improvement, Agricultural Ministry of China, Hangzhou 310058, P.R. China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, Hangzhou 310058, P.R. China
| | - Christine H Foyer
- Centre for Plant Sciences, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom
| | - Kai Shi
- Department of Horticulture, Zhejiang University, Hangzhou 310058, P.R. China
- Key Laboratory of Horticultural Plants Growth, Development and Quality Improvement, Agricultural Ministry of China, Hangzhou 310058, P.R. China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, Hangzhou 310058, P.R. China
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85
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Melatonin increases chilling tolerance in postharvest peach fruit by alleviating oxidative damage. Sci Rep 2018; 8:806. [PMID: 29339757 PMCID: PMC5770464 DOI: 10.1038/s41598-018-19363-5] [Citation(s) in RCA: 60] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2017] [Accepted: 12/27/2017] [Indexed: 01/01/2023] Open
Abstract
Melatonin has been reported to alleviate chilling symptoms in postharvest peach fruit during cold storage, however, the mechanism involved is largely unknown. To better understand its role in chilling tolerance, here we investigated the effects of melatonin on oxidative damage in peach fruit subjected to chilling after harvest. Chilling injury of peaches was dramatically reduced by melatonin treatment. Melatonin induced hydrogen peroxide (H2O2) content at the early stage of storage but inhibited its accumulation thereafter. Meanwhile, melatonin also up-regulated the expression of genes involved in antioxidant responses in peaches. In addition, compared to the control fruit, peaches treated with melatonin displayed higher transcript abundance of ascorbic acid (AsA) biosynthetic genes and consequently increased the AsA content. Our results suggested that in response to melatonin during chilling, the high H2O2 level in the treated peaches at the initial time of storage, may work as a signaling molecule to induce protective mechanisms via up-regulating the expression of antioxidative genes and increasing AsA content. On the other hand, after the transient increase in the treated peaches, H2O2 was efficiently removed because of the activated antioxidant systems, which was associated with the higher chilling tolerance induced by melatonin.
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86
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Ca 2+-permeable mechanosensitive channels MCA1 and MCA2 mediate cold-induced cytosolic Ca 2+ increase and cold tolerance in Arabidopsis. Sci Rep 2018; 8:550. [PMID: 29323146 PMCID: PMC5765038 DOI: 10.1038/s41598-017-17483-y] [Citation(s) in RCA: 71] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2016] [Accepted: 11/28/2017] [Indexed: 01/12/2023] Open
Abstract
Cold shock triggers an immediate rise in the cytosolic free calcium concentration ([Ca2+]cyt) in Arabidopsis thaliana and this cold-induced elevation of [Ca2+]cyt is inhibited by lanthanum or EGTA. It is suggested that intracellular calcium mainly contributes to the cold-induced [Ca2+]cyt response by entering into the cytosol. Two calcium-permeable mechanosensitive channels, MCA1 and MCA2 (mid1-complementing activity), have been identified in Arabidopsis. Here, we demonstrate that MCA1 and MCA2 are involved in a cold-induced increase in [Ca2+]cyt. The cold-induced [Ca2+]cyt increase in mca1 and mca2 mutants was markedly lower than that in wild types. The mca1 mca2 double mutant exhibited chilling and freezing sensitivity, compared to wild-type plants. Expression of At5g61820, At3g51660, and At4g15490, which are not regulated by the CBF/DREB1s transcription factor, was down-regulated in mca1 mca2. These results suggest that MCA1 and MCA2 are involved in the cold-induced elevation of [Ca2+]cyt, cold tolerance, and CBF/DREB1-independent cold signaling.
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87
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Bai L, Liu Y, Mu Y, Anwar A, He C, Yan Y, Li Y, Yu X. Heterotrimeric G-Protein γ Subunit CsGG3.2 Positively Regulates the Expression of CBF Genes and Chilling Tolerance in Cucumber. FRONTIERS IN PLANT SCIENCE 2018; 9:488. [PMID: 29719547 PMCID: PMC5913349 DOI: 10.3389/fpls.2018.00488] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2018] [Accepted: 03/29/2018] [Indexed: 05/03/2023]
Abstract
Heterotrimeric guanine nucleotide-binding proteins (G proteins) composed of alpha (Gα), beta (Gβ), and gamma (Gγ) subunits are central signal transducers mediating the cellular response to multiple stimuli, such as cold, in eukaryotes. Plant Gγ subunits, divided into A, B, and C three structurally distinct types, provide proper cellular localization and functional specificity to the heterotrimer complex. Here, we demonstrate that a type C Gγ subunit CsGG3.2 is involved in the regulation of the CBF regulon and plant tolerance to cold stresses in cucumber (Cucumis sativus L.). We showed that CsGG3.2 transcript abundance was positively induced by cold treatments. Transgenic cucumber plants (T1) constitutively over-expressing CsGG3.2 exhibits tolerance to chilling conditions and increased expression of CBF genes and their regulon. Antioxidative enzymes, i.e., superoxide dismutase, catalase, peroxidase, and glutathione reductase activities increased in cold-stressed transgenic plants. The reactive oxygen species, oxygen free radical and H2O2, production, as well as membrane lipid peroxidation (MDA) production decreased in transgenic plants, suggesting a better antioxidant system to cope the oxidative-damages caused by cold stress. These findings provide evidence for a critical role of CsGG3.2 in mediating cold signal transduction in plant cells.
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Affiliation(s)
- Longqiang Bai
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yumei Liu
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
- College of Agricultural and Biological Engineering, Heze University, Heze, China
| | - Ying Mu
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Ali Anwar
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Chaoxing He
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yan Yan
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yansu Li
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
- *Correspondence: Yansu Li, ; Xianchang Yu,
| | - Xianchang Yu
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
- *Correspondence: Yansu Li, ; Xianchang Yu,
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88
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Extracellular ATP elicits DORN1-mediated RBOHD phosphorylation to regulate stomatal aperture. Nat Commun 2017; 8:2265. [PMID: 29273780 PMCID: PMC5741621 DOI: 10.1038/s41467-017-02340-3] [Citation(s) in RCA: 118] [Impact Index Per Article: 16.9] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2017] [Accepted: 11/21/2017] [Indexed: 02/05/2023] Open
Abstract
In addition to acting as a cellular energy source, ATP can also act as a damage-associated molecular pattern in both animals and plants. Stomata are leaf pores that control gas exchange and, therefore, impact critical functions such as photosynthesis, drought tolerance, and also are the preferred entry point for pathogens. Here we show the addition of ATP leads to the rapid closure of leaf stomata and enhanced resistance to the bacterial pathogen Psuedomonas syringae. This response is mediated by ATP recognition by the receptor DORN1, followed by direct phosphorylation of the NADPH oxidase RBOHD, resulting in elevated production of reactive oxygen species and stomatal closure. Mutation of DORN1 phosphorylation sites on RBOHD eliminates the ability of ATP to induce stomatal closure. The data implicate purinergic signaling via DORN1 in the control of stomatal aperture with important implications for the control of plant photosynthesis, water homeostasis, pathogen resistance, and ultimately yield. Extracellular ATP acts as a damage-associated molecular pattern that triggers signaling responses to wounding and environmental stimuli in plants. Here Chen et al. show that ATP perception by DORN1 can trigger stomatal closure mediated via RBOHD phosphorylation and ROS production.
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89
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Pareek A, Khurana A, Sharma AK, Kumar R. An Overview of Signaling Regulons During Cold Stress Tolerance in Plants. Curr Genomics 2017; 18:498-511. [PMID: 29204079 PMCID: PMC5684653 DOI: 10.2174/1389202918666170228141345] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2016] [Revised: 09/23/2016] [Accepted: 10/05/2016] [Indexed: 11/22/2022] Open
Abstract
Plants, being sessile organisms, constantly withstand environmental fluctuations, including low-temperature, also referred as cold stress. Whereas cold poses serious challenges at both physiological and developmental levels to plants growing in tropical or sub-tropical regions, plants from temperate climatic regions can withstand chilling or freezing temperatures. Several cold inducible genes have already been isolated and used in transgenic approach to generate cold tolerant plants. The conventional breeding methods and marker assisted selection have helped in developing plant with improved cold tolerance, however, the development of freezing tolerant plants through cold acclimation remains an unaccomplished task. Therefore, it is essential to have a clear understanding of how low temperature sensing strategies and corresponding signal transduction act during cold acclimation process. Herein, we synthesize the available information on the molecular mechanisms underlying cold sensing and signaling with an aim that the summarized literature will help develop efficient strategies to obtain cold tolerant plants.
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Affiliation(s)
- Amit Pareek
- Department of Plant Molecular Biology, University of Delhi, South Campus, Benito Juarez Road, Dhaula Kuan, New Delhi-110021, India
| | - Ashima Khurana
- Ashima Khurana, Botany Department, Zakir Husain Delhi College, University of Delhi, New Delhi-110002, India
| | - Arun K. Sharma
- Department of Plant Molecular Biology, University of Delhi, South Campus, Benito Juarez Road, Dhaula Kuan, New Delhi-110021, India
| | - Rahul Kumar
- Repository of Tomato Genomics Resources, Department of Plant Sciences, University of Hyderabad, Hyderabad500046, India
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90
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Aiyar P, Schaeme D, García-Altares M, Carrasco Flores D, Dathe H, Hertweck C, Sasso S, Mittag M. Antagonistic bacteria disrupt calcium homeostasis and immobilize algal cells. Nat Commun 2017; 8:1756. [PMID: 29170415 PMCID: PMC5701020 DOI: 10.1038/s41467-017-01547-8] [Citation(s) in RCA: 56] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2017] [Accepted: 09/27/2017] [Indexed: 11/09/2022] Open
Abstract
Photosynthetic unicellular organisms, known as microalgae, are key contributors to carbon fixation on Earth. Their biotic interactions with other microbes shape aquatic microbial communities and influence the global photosynthetic capacity. So far, limited information is available on molecular factors that govern these interactions. We show that the bacterium Pseudomonas protegens strongly inhibits the growth and alters the morphology of the biflagellated green alga Chlamydomonas reinhardtii. This antagonistic effect is decreased in a bacterial mutant lacking orfamides, demonstrating that these secreted cyclic lipopeptides play an important role in the algal-bacterial interaction. Using an aequorin Ca2+-reporter assay, we show that orfamide A triggers an increase in cytosolic Ca2+ in C. reinhardtii and causes deflagellation of algal cells. These effects of orfamide A, which are specific to the algal class of Chlorophyceae and appear to target a Ca2+ channel in the plasma membrane, represent a novel biological activity for cyclic lipopeptides.
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Affiliation(s)
- Prasad Aiyar
- Institute of General Botany and Plant Physiology, Friedrich Schiller University, Am Planetarium 1, 07743, Jena, Germany
| | - Daniel Schaeme
- Institute of General Botany and Plant Physiology, Friedrich Schiller University, Am Planetarium 1, 07743, Jena, Germany
| | - María García-Altares
- Leibniz Institute for Natural Product Research and Infection Biology (HKI), Beutenbergstr. 11 a, 07745, Jena, Germany
| | - David Carrasco Flores
- Institute of General Botany and Plant Physiology, Friedrich Schiller University, Am Planetarium 1, 07743, Jena, Germany
| | - Hannes Dathe
- Institute of General Botany and Plant Physiology, Friedrich Schiller University, Am Planetarium 1, 07743, Jena, Germany
| | - Christian Hertweck
- Leibniz Institute for Natural Product Research and Infection Biology (HKI), Beutenbergstr. 11 a, 07745, Jena, Germany
| | - Severin Sasso
- Institute of General Botany and Plant Physiology, Friedrich Schiller University, Am Planetarium 1, 07743, Jena, Germany.
| | - Maria Mittag
- Institute of General Botany and Plant Physiology, Friedrich Schiller University, Am Planetarium 1, 07743, Jena, Germany.
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91
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Lv X, Ge S, Jalal Ahammed G, Xiang X, Guo Z, Yu J, Zhou Y. Crosstalk between Nitric Oxide and MPK1/2 Mediates Cold Acclimation-induced Chilling Tolerance in Tomato. PLANT & CELL PHYSIOLOGY 2017; 58:1963-1975. [PMID: 29036450 DOI: 10.1093/pcp/pcx134] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2017] [Accepted: 08/31/2017] [Indexed: 06/07/2023]
Abstract
The participation of nitric oxide (NO) in the responses of plants towards biotic and abiotic stresses is well established. However, the mechanism involved particularly in cold acclimation-induced chilling tolerance remains elusive. Here we show the cold acclimation induced-chilling tolerance was associated with inductions of nitrate reductase (NR)-dependent NO production, S-nitrosylated glutathione reductase (GSNOR) activity and mitogen-activated protein kinases MPK1/2 activation in tomato plants. Silencing of NR resulted in decreased GSNOR activity and MPK1/2 activation, which subsequently compromised cold acclimation-induced chilling tolerance. By contrast, silencing of GSNOR caused decreased NR activity, increased NO accumulation and MPK1/2 activation, and enhanced cold acclimation-induced chilling tolerance. Furthermore, co-silencing of MPK1 and MPK2 attenuated the NR-dependent NO production and cold acclimation-induced tolerance to chilling. Results from present study suggest the importance of MPK1/2 for the induction of NR-dependent NO generation, while the accumulation of nitrosylated glutathione from NO-derived reactive nitrogen species could potentially S-nitrosylate NR. These findings provide new insight into the crosstalk of NO and MPK1/2 in cold acclimation-induced chilling tolerance in tomato plants.
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Affiliation(s)
- Xiangzhang Lv
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Shibei Ge
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Golam Jalal Ahammed
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Xun Xiang
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Zhixin Guo
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Jingquan Yu
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Yanhong Zhou
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, 866 Yuhangtang Road, Hangzhou 310058, China
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92
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Rodrigo-Moreno A, Bazihizina N, Azzarello E, Masi E, Tran D, Bouteau F, Baluska F, Mancuso S. Root phonotropism: Early signalling events following sound perception in Arabidopsis roots. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2017; 264:9-15. [PMID: 28969806 DOI: 10.1016/j.plantsci.2017.08.001] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Revised: 07/31/2017] [Accepted: 08/01/2017] [Indexed: 05/10/2023]
Abstract
Sound is a fundamental form of energy and it has been suggested that plants can make use of acoustic cues to obtain information regarding their environments and alter and fine-tune their growth and development. Despite an increasing body of evidence indicating that it can influence plant growth and physiology, many questions concerning the effect of sound waves on plant growth and the underlying signalling mechanisms remains unknown. Here we show that in Arabidopsis thaliana, exposure to sound waves (200Hz) for 2 weeks induced positive phonotropism in roots, which grew towards to sound source. We found that sound waves triggered very quickly (within minutes) an increase in cytosolic Ca2+, possibly mediated by an influx through plasma membrane and a release from internal stock. Sound waves likewise elicited rapid reactive oxygen species (ROS) production and K+ efflux. Taken together these results suggest that changes in ion fluxes (Ca2+ and K+) and an increase in superoxide production are involved in sound perception in plants, as previously established in animals.
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Affiliation(s)
- Ana Rodrigo-Moreno
- Department of Agrifood Production and Environmental Sciences - Università degli Studi di Firenze, Viale delle Idee 30, 50019 Sesto Fiorentino, Florence, Italy.
| | - Nadia Bazihizina
- Department of Agrifood Production and Environmental Sciences - Università degli Studi di Firenze, Viale delle Idee 30, 50019 Sesto Fiorentino, Florence, Italy
| | - Elisa Azzarello
- Department of Agrifood Production and Environmental Sciences - Università degli Studi di Firenze, Viale delle Idee 30, 50019 Sesto Fiorentino, Florence, Italy
| | - Elisa Masi
- Department of Agrifood Production and Environmental Sciences - Università degli Studi di Firenze, Viale delle Idee 30, 50019 Sesto Fiorentino, Florence, Italy
| | - Daniel Tran
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
| | - François Bouteau
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France
| | | | - Stefano Mancuso
- Department of Agrifood Production and Environmental Sciences - Università degli Studi di Firenze, Viale delle Idee 30, 50019 Sesto Fiorentino, Florence, Italy
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93
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Wang L, Nick P. Cold sensing in grapevine-Which signals are upstream of the microtubular "thermometer". PLANT, CELL & ENVIRONMENT 2017; 40:2844-2857. [PMID: 28898434 DOI: 10.1111/pce.13066] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2016] [Revised: 08/23/2017] [Accepted: 08/28/2017] [Indexed: 05/09/2023]
Abstract
Plants can acquire freezing tolerance in response to cold but non-freezing temperatures. To efficiently activate this cold acclimation, low temperature has to be sensed and processed swiftly, a process that is linked with a transient elimination of microtubules. Here, we address cold-induced microtubules elimination in a grapevine cell line stably expressing a green fluorescent protein fusion of Arabidopsis TuB6, which allows to follow their response in vivo and to quantify this response by quantitative image analysis. We use time-course studies with several specific pharmacological inhibitors and activators to dissect the signalling events acting upstream of microtubules elimination. We find that microtubules disappear within 30 min after the onset of cold stress. We provide evidence for roles of calcium influx, membrane rigidification, and activation of NAD(P)H oxidase as factors in signal susception and amplification. We further conclude that a G-protein in concert with a phospholipase D convey the signal towards microtubules, whereas calmodulin seems to be not involved. Moreover, activation of jasmonate pathway in response to cold is required for an efficient microtubule response. We summarize our findings in a working model on a complex signalling hub at the membrane-cytoskeleton interphase that assembles the susception, perception and early transduction of cold signals.
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Affiliation(s)
- Lixin Wang
- Molecular Cell Biology, Botanical Institute, Karlsruhe Institute of Technology, Fritz-Haber-Weg 4, 76131, Karlsruhe, Germany
| | - Peter Nick
- Molecular Cell Biology, Botanical Institute, Karlsruhe Institute of Technology, Fritz-Haber-Weg 4, 76131, Karlsruhe, Germany
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94
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Liu J, Xu Y, Zhang L, Li W, Cai Z, Li F, Peng M, Li F, Hu B. De novo assembly and analysis of the transcriptome of Rumex patientia L. during cold stress. PLoS One 2017; 12:e0186470. [PMID: 29023590 PMCID: PMC5638559 DOI: 10.1371/journal.pone.0186470] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2017] [Accepted: 10/02/2017] [Indexed: 12/19/2022] Open
Abstract
BACKGROUND Rumex patientia L. is consumed as a green vegetable in several parts of the world, and can withstand extremely low temperatures (-35°C). However, little or no available genomic data for this species has been reported to date. Here, we used Illumina Hiseq technology for transcriptome assembly in R. patientia under normal and cold conditions to evaluate how it responds to cold stress. RESULTS After an in-depth RNA-Seq analysis, 115,589 unigenes were produced from the assembled transcripts. Based on similarity search analysis with seven databases, we obtained and annotated 60,157 assembled unigenes to at least one database. In total, 1,179 unigenes that were identified as differentially expressed genes (DEGs), including up-regulated (925) and down-regulated ones (254), were successfully assigned GO annotations and classified into three major metabolic pathways. Ribosome, carbon metabolism, oxidative phosphorylation and biosynthesis of amino acids were the most highly enriched pathways according to KEGG analysis. Overall, 66 up-regulated genes were identified as putatively involved in the response to cold stress, including members of MYB, AP2/ERF, CBF, Znf, bZIP, NAC and COR families. CONCLUSION To our knowledge, this investigation was the first to provide a cold-responsive (COR) transcriptome assembly in R. patientia. A large number of potential COR genes were identified, suggesting that this species is suitable for cultivation in northern China. In summary, these data provide valuable information for future research and genomic studies in R. patientia.
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Affiliation(s)
- Jianxin Liu
- College of Life Science, Northeast Agricultural University, Harbin, China
- Heilongjiang Academy of Agricultural Sciences, Harbin, China
| | - Yongqing Xu
- College of Life Science, Northeast Agricultural University, Harbin, China
| | - Liguo Zhang
- College of Life Science, Northeast Agricultural University, Harbin, China
| | - Wei Li
- College of Life Science, Northeast Agricultural University, Harbin, China
| | - Zhenxue Cai
- College of Life Science, Northeast Agricultural University, Harbin, China
| | - Fei Li
- College of Life Science, Northeast Agricultural University, Harbin, China
| | - Mu Peng
- Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Harbin, China
| | - Fenglan Li
- College of Life Science, Northeast Agricultural University, Harbin, China
- * E-mail: (FLL); (BZH)
| | - Baozhong Hu
- College of Life Science, Northeast Agricultural University, Harbin, China
- Harbin university, Harbin, China
- * E-mail: (FLL); (BZH)
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95
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Kim YS, An C, Park S, Gilmour SJ, Wang L, Renna L, Brandizzi F, Grumet R, Thomashow MF. CAMTA-Mediated Regulation of Salicylic Acid Immunity Pathway Genes in Arabidopsis Exposed to Low Temperature and Pathogen Infection. THE PLANT CELL 2017; 29:2465-2477. [PMID: 28982964 PMCID: PMC5774559 DOI: 10.1105/tpc.16.00865] [Citation(s) in RCA: 86] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2016] [Revised: 09/20/2017] [Accepted: 10/05/2017] [Indexed: 05/21/2023]
Abstract
Arabidopsis thaliana calmodulin binding transcription activator (CAMTA) factors repress the expression of genes involved in salicylic acid (SA) biosynthesis and SA-mediated immunity in healthy plants grown at warm temperature (22°C). This repression is overcome in plants exposed to low temperature (4°C) for more than a week and in plants infected by biotrophic and hemibiotrophic pathogens. Here, we present evidence that CAMTA3-mediated repression of SA pathway genes in nonstressed plants involves the action of an N-terminal repression module (NRM) that acts independently of calmodulin (CaM) binding to the IQ and CaM binding (CaMB) domains, a finding that is contrary to current thinking that CAMTA3 repression activity requires binding of CaM to the CaMB domain. Induction of SA pathway genes in response to low temperature did not occur in plants expressing only the CAMTA3-NRM region of the protein. Mutational analysis provided evidence that the repression activity of the NRM was suppressed by action of the IQ and CaMB domains responding to signals generated in response to low temperature. Plants expressing the CAMTA3-NRM region were also impaired in defense against the bacterial hemibiotrophic pathogen Pseudomonas syringae pv tomato DC3000. Our results indicate that the regulation of CAMTA3 repression activity by low temperature and pathogen infection involves related mechanisms, but with distinct differences.
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Affiliation(s)
- Yong Sig Kim
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
- MSU Plant Resilience Institute, Michigan State University, East Lansing, Michigan 48824
| | - Chuanfu An
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
- MSU Plant Resilience Institute, Michigan State University, East Lansing, Michigan 48824
| | - Sunchung Park
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
- MSU Plant Resilience Institute, Michigan State University, East Lansing, Michigan 48824
| | - Sarah J Gilmour
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
- MSU Plant Resilience Institute, Michigan State University, East Lansing, Michigan 48824
| | - Ling Wang
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
- MSU Plant Resilience Institute, Michigan State University, East Lansing, Michigan 48824
- Laboratory of Seed Science and Technology, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, P.R. China
| | - Luciana Renna
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
| | - Federica Brandizzi
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
| | - Rebecca Grumet
- Department of Horticulture, Michigan State University, East Lansing, Michigan 48824
| | - Michael F Thomashow
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
- MSU Plant Resilience Institute, Michigan State University, East Lansing, Michigan 48824
- Plant, Soil, and Microbial Sciences, Michigan State University, East Lansing, Michigan 48824
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96
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Gierczik K, Novák A, Ahres M, Székely A, Soltész A, Boldizsár Á, Gulyás Z, Kalapos B, Monostori I, Kozma-Bognár L, Galiba G, Vágújfalvi A. Circadian and Light Regulated Expression of CBFs and their Upstream Signalling Genes in Barley. Int J Mol Sci 2017; 18:E1828. [PMID: 28829375 PMCID: PMC5578212 DOI: 10.3390/ijms18081828] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2017] [Revised: 08/10/2017] [Accepted: 08/19/2017] [Indexed: 12/26/2022] Open
Abstract
CBF (C-repeat binding factor) transcription factors show high expression levels in response to cold; moreover, they play a key regulatory role in cold acclimation processes. Recently, however, more and more information has led to the conclusion that, apart from cold, light-including its spectra-also has a crucial role in regulating CBF expression. Earlier, studies established that the expression patterns of some of these regulatory genes follow circadian rhythms. To understand more of this complex acclimation process, we studied the expression patterns of the signal transducing pathways, including signal perception, the circadian clock and phospholipid signalling pathways, upstream of the CBF gene regulatory hub. To exclude the confounding effect of cold, experiments were carried out at 22 °C. Our results show that the expression of genes implicated in the phospholipid signalling pathway follow a circadian rhythm. We demonstrated that, from among the tested CBF genes expressed in Hordeumvulgare (Hv) under our conditions, only the members of the HvCBF4-phylogenetic subgroup showed a circadian pattern. We found that the HvCBF4-subgroup genes were expressed late in the afternoon or early in the night. We also determined the expression changes under supplemental far-red illumination and established that the transcript accumulation had appeared four hours earlier and more intensely in several cases. Based on our results, we propose a model to illustrate the effect of the circadian clock and the quality of the light on the elements of signalling pathways upstream of the HvCBFs, thus integrating the complex regulation of the early cellular responses, which finally lead to an elevated abiotic stress tolerance.
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Affiliation(s)
- Krisztián Gierczik
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
- Festetics Doctoral School, Georgikon Faculty, University of Pannonia, 8360 Keszthely, Hungary.
| | - Aliz Novák
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
- Festetics Doctoral School, Georgikon Faculty, University of Pannonia, 8360 Keszthely, Hungary.
| | - Mohamed Ahres
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
- Festetics Doctoral School, Georgikon Faculty, University of Pannonia, 8360 Keszthely, Hungary.
| | - András Székely
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
| | - Alexandra Soltész
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
| | - Ákos Boldizsár
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
| | - Zsolt Gulyás
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
| | - Balázs Kalapos
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
| | - István Monostori
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
| | - László Kozma-Bognár
- Institute of Plant Biology, Biological Research Centre, Hungarian Academy of Sciences, 6726 Szeged, Hungary.
- Department of Genetics, Faculty of Sciences and Informatics, University of Szeged, 6726 Szeged, Hungary.
| | - Gábor Galiba
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
- Festetics Doctoral School, Georgikon Faculty, University of Pannonia, 8360 Keszthely, Hungary.
| | - Attila Vágújfalvi
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, 2462 Martonvásár, Hungary.
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97
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Differential Proteomic Analysis Reveals the Effect of Calcium on Malus baccata Borkh. Leaves under Temperature Stress. Int J Mol Sci 2017; 18:ijms18081755. [PMID: 28800123 PMCID: PMC5578145 DOI: 10.3390/ijms18081755] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2017] [Revised: 08/08/2017] [Accepted: 08/08/2017] [Indexed: 12/17/2022] Open
Abstract
In the cool apple-producing areas of northern China, air temperature during early spring changes in a rapid and dramatic manner, which affects the growth and development of apple trees at the early stage of the growing season. Previous studies have shown that the treatment of calcium can increase the cold tolerance of Malus baccata Borkh., a widely-used rootstock apple tree in northern China. To better understand the physiological function of calcium in the response of M. baccata to temperature stress, we analyzed the effect of calcium treatment (2% CaCl₂) on M. baccata leaves under temperature stress. Physiological analysis showed that temperature stress aggravated membrane lipid peroxidation, reduced chlorophyll content and induced photo-inhibition in leaves, whereas these indicators of stress injuries were alleviated by the application of calcium. An isobaric tags for relative and absolute quantitation (iTRAQ)-based proteomics approach was used in this study. Among the 2114 proteins that were detected in M. baccata leaves, 41, 25, and 34 proteins were differentially regulated by the increasing, decreasing, and changing temperature treatments, respectively. Calcium treatment induced 9 and 15 proteins after increasing and decreasing temperature, respectively, in comparison with non-treated plants. These calcium-responsive proteins were mainly related to catalytic activity, binding, and structural molecule activity. Hierarchical cluster analysis indicated that the changes in abundance of the proteins under increasing temperature and changing temperature treatments were similar, and the changes in protein abundance under decreasing temperature and increasing temperature with calcium treatment were similar. The findings of this study will allow a better understanding of the mechanisms underlying the role of calcium in M. baccata leaves under temperature stress.
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98
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Vincent TR, Avramova M, Canham J, Higgins P, Bilkey N, Mugford ST, Pitino M, Toyota M, Gilroy S, Miller AJ, Hogenhout SA, Sanders D. Interplay of Plasma Membrane and Vacuolar Ion Channels, Together with BAK1, Elicits Rapid Cytosolic Calcium Elevations in Arabidopsis during Aphid Feeding. THE PLANT CELL 2017; 29:1460-1479. [PMID: 28559475 PMCID: PMC5502460 DOI: 10.1105/tpc.17.00136] [Citation(s) in RCA: 115] [Impact Index Per Article: 16.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2017] [Revised: 05/22/2017] [Accepted: 05/29/2017] [Indexed: 05/17/2023]
Abstract
A transient rise in cytosolic calcium ion concentration is one of the main signals used by plants in perception of their environment. The role of calcium in the detection of abiotic stress is well documented; however, its role during biotic interactions remains unclear. Here, we use a fluorescent calcium biosensor (GCaMP3) in combination with the green peach aphid (Myzus persicae) as a tool to study Arabidopsis thaliana calcium dynamics in vivo and in real time during a live biotic interaction. We demonstrate rapid and highly localized plant calcium elevations around the feeding sites of M. persicae, and by monitoring aphid feeding behavior electrophysiologically, we demonstrate that these elevations correlate with aphid probing of epidermal and mesophyll cells. Furthermore, we dissect the molecular mechanisms involved, showing that interplay between the plant defense coreceptor BRASSINOSTEROID INSENSITIVE-ASSOCIATED KINASE1 (BAK1), the plasma membrane ion channels GLUTAMATE RECEPTOR-LIKE 3.3 and 3.6 (GLR3.3 and GLR3.6), and the vacuolar ion channel TWO-PORE CHANNEL1 (TPC1) mediate these calcium elevations. Consequently, we identify a link between plant perception of biotic threats by BAK1, cellular calcium entry mediated by GLRs, and intracellular calcium release by TPC1 during a biologically relevant interaction.
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Affiliation(s)
- Thomas R Vincent
- Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - Marieta Avramova
- Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - James Canham
- Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - Peter Higgins
- Department of Crop Genetics, John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - Natasha Bilkey
- Department of Crop Genetics, John Innes Centre, Norwich NR4 7UH, United Kingdom
- Department of Botany, University of Wisconsin, Madison, Wisconsin 53706
| | - Sam T Mugford
- Department of Crop Genetics, John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - Marco Pitino
- Department of Crop Genetics, John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - Masatsugu Toyota
- Department of Botany, University of Wisconsin, Madison, Wisconsin 53706
- Department of Biochemistry and Molecular Biology, Saitama University, Sakura-ku, Saitama 338-8570, Japan
- Japan Science and Technology Agency, Precursory Research for Embryonic Science and Technology (PRESTO), Kawaguchi, Saitama 332-0012, Japan
| | - Simon Gilroy
- Department of Botany, University of Wisconsin, Madison, Wisconsin 53706
| | - Anthony J Miller
- Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - Saskia A Hogenhout
- Department of Crop Genetics, John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - Dale Sanders
- Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom
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99
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Discovery of nitrate-CPK-NLP signalling in central nutrient-growth networks. Nature 2017; 545:311-316. [PMID: 28489820 DOI: 10.1038/nature22077] [Citation(s) in RCA: 327] [Impact Index Per Article: 46.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Accepted: 03/16/2017] [Indexed: 12/17/2022]
Abstract
Nutrient signalling integrates and coordinates gene expression, metabolism and growth. However, its primary molecular mechanisms remain incompletely understood in plants and animals. Here we report unique Ca2+ signalling triggered by nitrate with live imaging of an ultrasensitive biosensor in Arabidopsis leaves and roots. A nitrate-sensitized and targeted functional genomic screen identifies subgroup III Ca2+-sensor protein kinases (CPKs) as master regulators that orchestrate primary nitrate responses. A chemical switch with the engineered mutant CPK10(M141G) circumvents embryo lethality and enables conditional analyses of cpk10 cpk30 cpk32 triple mutants to define comprehensive nitrate-associated regulatory and developmental programs. Nitrate-coupled CPK signalling phosphorylates conserved NIN-LIKE PROTEIN (NLP) transcription factors to specify the reprogramming of gene sets for downstream transcription factors, transporters, nitrogen assimilation, carbon/nitrogen metabolism, redox, signalling, hormones and proliferation. Conditional cpk10 cpk30 cpk32 and nlp7 mutants similarly impair nitrate-stimulated system-wide shoot growth and root establishment. The nutrient-coupled Ca2+ signalling network integrates transcriptome and cellular metabolism with shoot-root coordination and developmental plasticity in shaping organ biomass and architecture.
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100
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