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Brands M, Wewer V, Keymer A, Gutjahr C, Dörmann P. The Lotus japonicus acyl-acyl carrier protein thioesterase FatM is required for mycorrhiza formation and lipid accumulation of Rhizophagus irregularis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2018; 95:219-232. [PMID: 29687516 DOI: 10.1111/tpj.13943] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2017] [Revised: 03/26/2018] [Accepted: 04/05/2018] [Indexed: 05/04/2023]
Abstract
Arbuscular mycorrhiza (AM) fungi establish symbiotic interactions with plants, providing the host plant with minerals, i.e. phosphate, in exchange for organic carbon. Arbuscular mycorrhiza fungi of the order Glomerales produce vesicles which store lipids as an energy and carbon source. Acyl-acyl carrier protein (ACP) thioesterases (Fat) are essential components of the plant plastid-localized fatty acid synthase and determine the chain length of de novo synthesized fatty acids. In addition to the ubiquitous FatA and FatB thioesterases, AM-competent plants contain an additional, AM-specific, FatM gene. Here, we characterize FatM from Lotus japonicus by phenotypically analyzing fatm mutant lines and by studying the biochemical function of the recombinant FatM protein. Reduced shoot phosphate content in fatm indicates compromised symbiotic phosphate uptake due to reduced arbuscule branching, and the fungus shows reduced lipid accumulation accompanied by the occurrence of smaller and less frequent vesicles. Lipid profiling reveals a decrease in mycorrhiza-specific phospholipid forms, AM fungal signature fatty acids (e.g. 16:1ω5, 18:1ω7 and 20:3) and storage lipids. Recombinant FatM shows preference for palmitoyl (16:0)-ACP, indicating that large amounts of 16:0 fatty acid are exported from the plastids of arbuscule-containing cells. Stable isotope labeling with [13 C2 ]acetate showed reduced incorporation into mycorrhiza-specific fatty acids in the fatm mutant. Therefore, colonized cells reprogram plastidial de novo fatty acid synthesis towards the production of extra amounts of 16:0, which is in agreement with previous results that fatty acid-containing lipids are transported from the plant to the fungus.
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Affiliation(s)
- Mathias Brands
- Institute for Molecular Biotechnology and Physiology of Plants (IMBIO), University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
| | - Vera Wewer
- Institute for Molecular Biotechnology and Physiology of Plants (IMBIO), University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
- Center of Excellence in Plant Sciences (CEPLAS), Mass Spectrometry Platform, University of Cologne, Zülpicher Straße 47b, 50674, Cologne, Germany
| | - Andreas Keymer
- Faculty of Biology, Genetics, Biocenter, Martinsried, LMU Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
| | - Caroline Gutjahr
- Faculty of Biology, Genetics, Biocenter, Martinsried, LMU Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
- Plant Genetics, School of Life Sciences Weihenstephan, Technical University of Munich, Emil Ramann Straße 4, 85354, Freising, Germany
| | - Peter Dörmann
- Institute for Molecular Biotechnology and Physiology of Plants (IMBIO), University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
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Fiorilli V, Vannini C, Ortolani F, Garcia-Seco D, Chiapello M, Novero M, Domingo G, Terzi V, Morcia C, Bagnaresi P, Moulin L, Bracale M, Bonfante P. Omics approaches revealed how arbuscular mycorrhizal symbiosis enhances yield and resistance to leaf pathogen in wheat. Sci Rep 2018; 8:9625. [PMID: 29941972 PMCID: PMC6018116 DOI: 10.1038/s41598-018-27622-8] [Citation(s) in RCA: 61] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2018] [Accepted: 05/29/2018] [Indexed: 01/27/2023] Open
Abstract
Besides improved mineral nutrition, plants colonised by arbuscular mycorrhizal (AM) fungi often display increased biomass and higher tolerance to biotic and abiotic stresses. Notwithstanding the global importance of wheat as an agricultural crop, its response to AM symbiosis has been poorly investigated. We focused on the role of an AM fungus on mineral nutrition of wheat, and on its potential protective effect against Xanthomonas translucens. To address these issues, phenotypical, molecular and metabolomic approaches were combined. Morphological observations highlighted that AM wheat plants displayed an increased biomass and grain yield, as well as a reduction in lesion area following pathogen infection. To elucidate the molecular mechanisms underlying the mycorrhizal phenotype, we investigated changes of transcripts and proteins in roots and leaves during the double (wheat-AM fungus) and tripartite (wheat-AM fungus-pathogen) interaction. Transcriptomic and proteomic profiling identified the main pathways involved in enhancing plant biomass, mineral nutrition and in promoting the bio-protective effect against the leaf pathogen. Mineral and amino acid contents in roots, leaves and seeds, and protein oxidation profiles in leaves, supported the omics data, providing new insight into the mechanisms exerted by AM symbiosis to confer stronger productivity and enhanced resistance to X. translucens in wheat.
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Affiliation(s)
- Valentina Fiorilli
- Department of Life Sciences and Systems Biology, Università degli Studi di Torino, Viale P.A. Mattioli 25, 10125, Torino, Italy.
| | - Candida Vannini
- Dipartimento di Biotecnologie e Scienze della Vita, Università degli Studi dell'Insubria, via J.H. Dunant 3, 21100, Varese, Italy
| | - Francesca Ortolani
- Dipartimento di Biotecnologie e Scienze della Vita, Università degli Studi dell'Insubria, via J.H. Dunant 3, 21100, Varese, Italy
| | - Daniel Garcia-Seco
- IRD, Cirad, Univ. Montpellier, Interactions Plantes Microorganismes Environnement (IPME), 34394, Montpellier, France
| | - Marco Chiapello
- Dipartimento di Biotecnologie e Scienze della Vita, Università degli Studi dell'Insubria, via J.H. Dunant 3, 21100, Varese, Italy
| | - Mara Novero
- Department of Life Sciences and Systems Biology, Università degli Studi di Torino, Viale P.A. Mattioli 25, 10125, Torino, Italy
| | - Guido Domingo
- Dipartimento di Biotecnologie e Scienze della Vita, Università degli Studi dell'Insubria, via J.H. Dunant 3, 21100, Varese, Italy
| | - Valeria Terzi
- CREA-GB, Research Centre for Genomics and Bioinformatics, Via San Protaso 302, 29017, Fiorenzuola d'Arda, Italy
| | - Caterina Morcia
- CREA-GB, Research Centre for Genomics and Bioinformatics, Via San Protaso 302, 29017, Fiorenzuola d'Arda, Italy
| | - Paolo Bagnaresi
- CREA-GB, Research Centre for Genomics and Bioinformatics, Via San Protaso 302, 29017, Fiorenzuola d'Arda, Italy
| | - Lionel Moulin
- IRD, Cirad, Univ. Montpellier, Interactions Plantes Microorganismes Environnement (IPME), 34394, Montpellier, France
| | - Marcella Bracale
- Dipartimento di Biotecnologie e Scienze della Vita, Università degli Studi dell'Insubria, via J.H. Dunant 3, 21100, Varese, Italy
| | - Paola Bonfante
- Department of Life Sciences and Systems Biology, Università degli Studi di Torino, Viale P.A. Mattioli 25, 10125, Torino, Italy
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53
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Lanfranco L, Fiorilli V, Venice F, Bonfante P. Strigolactones cross the kingdoms: plants, fungi, and bacteria in the arbuscular mycorrhizal symbiosis. JOURNAL OF EXPERIMENTAL BOTANY 2018; 69:2175-2188. [PMID: 29309622 DOI: 10.1093/jxb/erx432] [Citation(s) in RCA: 75] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2017] [Accepted: 11/10/2017] [Indexed: 05/20/2023]
Abstract
Strigolactones (SLs) first evolved as regulators of simple developmental processes in very ancient plant lineages, and then assumed new roles to sustain the increasing biological complexity of land plants. Their versatility is also shown by the fact that during evolution they have been exploited, once released in the rhizosphere, as a communication system towards plant-interacting organisms even belonging to different kingdoms. Here, we reviewed the impact of SLs on soil microbes, paying particular attention to arbuscular mycorrhizal fungi (AMF). SLs induce several responses in AMF, including spore germination, hyphal branching, mitochondrial metabolism, transcriptional reprogramming, and production of chitin oligosaccharides which, in turn, stimulate early symbiotic responses in the host plant. In the specific case study of the AMF Gigaspora margarita, SLs are also perceived, directly or indirectly, by the well-characterized population of endobacteria, with an increase of bacterial divisions and the activation of specific transcriptional responses. The dynamics of SLs during AM root colonization were also surveyed. Although not essential for the establishment of this mutualistic association, SLs act as positive regulators as they are relevant to achieve the full extent of colonization. This possibly occurs through a complex crosstalk with other hormones such as auxin, abscisic acid, and gibberellins.
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Affiliation(s)
- Luisa Lanfranco
- Department of Life Sciences and Systems Biology, University of Torino, Torino, Italy
| | - Valentina Fiorilli
- Department of Life Sciences and Systems Biology, University of Torino, Torino, Italy
| | - Francesco Venice
- Department of Life Sciences and Systems Biology, University of Torino, Torino, Italy
| | - Paola Bonfante
- Department of Life Sciences and Systems Biology, University of Torino, Torino, Italy
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54
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Rozpądek P, Domka AM, Nosek M, Ważny R, Jędrzejczyk RJ, Wiciarz M, Turnau K. The Role of Strigolactone in the Cross-Talk Between Arabidopsis thaliana and the Endophytic Fungus Mucor sp. Front Microbiol 2018; 9:441. [PMID: 29615990 PMCID: PMC5867299 DOI: 10.3389/fmicb.2018.00441] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2017] [Accepted: 02/26/2018] [Indexed: 01/24/2023] Open
Abstract
Over the last years the role of fungal endophytes in plant biology has been extensively studied. A number of species were shown to positively affect plant growth and fitness, thus attempts have been made to utilize these microorganisms in agriculture and phytoremediation. Plant-fungi symbiosis requires multiple metabolic adjustments of both of the interacting organisms. The mechanisms of these adaptations are mostly unknown, however, plant hormones seem to play a central role in this process. The plant hormone strigolactone (SL) was previously shown to activate hyphae branching of mycorrhizal fungi and to negatively affect pathogenic fungi growth. Its role in the plant-endophytic fungi interaction is unknown. The effect of the synthetic SL analog GR24 on the endophytic fungi Mucor sp. growth, respiration, H2O2 production and the activity of antioxidant enzymes was evaluated. We found fungi colony growth rate was decreased in a GR24 concentration dependent manner. Additionally, the fungi accumulated more H2O2 what was accompanied by an altered activity of antioxidant enzymes. Symbiosis with Mucor sp. positively affected Arabidopsis thaliana growth, but SL was necessary for the establishment of the beneficial interaction. A. thaliana biosynthesis mutants max1 and max4, but not the SL signaling mutant max2 did not develop the beneficial phenotype. The negative growth response was correlated with alterations in SA homeostasis and a significant upregulation of genes encoding selected plant defensins. The fungi were also shown to be able to decompose SL in planta and to downregulate the expression of SL biosynthesis genes. Additionally, we have shown that GR24 treatment with a dose of 1 μM activates the production of SA in A. thaliana. The results presented here provide evidence for a role of SL in the plant-endophyte cross-talk during the mutualistic interaction between Arabidopsis thaliana and Mucor sp.
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Affiliation(s)
- Piotr Rozpądek
- Małopolska Centre of Biotechnology, Jagiellonian University, Kraków, Poland
| | - Agnieszka M. Domka
- Institute of Environmental Sciences, Jagiellonian University, Kraków, Poland
| | - Michał Nosek
- Institute of Biology, Pedagogical University of Kraków, Kraków, Poland
| | - Rafał Ważny
- Małopolska Centre of Biotechnology, Jagiellonian University, Kraków, Poland
| | | | - Monika Wiciarz
- Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland
| | - Katarzyna Turnau
- Institute of Environmental Sciences, Jagiellonian University, Kraków, Poland
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55
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Kobae Y, Kameoka H, Sugimura Y, Saito K, Ohtomo R, Fujiwara T, Kyozuka J. Strigolactone Biosynthesis Genes of Rice are Required for the Punctual Entry of Arbuscular Mycorrhizal Fungi into the Roots. PLANT & CELL PHYSIOLOGY 2018; 59:544-553. [PMID: 29325120 DOI: 10.1093/pcp/pcy001] [Citation(s) in RCA: 74] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2017] [Accepted: 12/29/2017] [Indexed: 05/20/2023]
Abstract
Arbuscular mycorrhiza (AM) is a mutualistic association between most plant species and the ancient fungal phylum Glomeromycota in roots, and it plays a key role in a plant's nutrient uptake from the soil. Roots synthesize strigolactones (SLs), derivatives of carotenoids, and exude them to induce energy metabolism and hyphal branching of AM fungi. Despite the well-documented roles of SLs in the pre-symbiotic phase, little is known about the role of SLs in the process of root colonization. Here we show that the expansion of root colonization is suppressed in the mutants of rice (Oryza sativa) SL biosynthesis genes, carotenoid cleavage dioxygenase D10 and more severely in D17. Interestingly, most of the colonization process is normal, i.e. AM fungal hyphae approach the roots and cling around them, and epidermal penetration, arbuscule size, arbuscule number per hyphopodium and metabolic activity of the intraradical mycelium are not affected in d10 and d17 mutants. In contrast, hyphopodium formation is severely attenuated. Our observations establish the requirement for SL biosynthesis genes for efficient hyphopodium formation, suggesting that SLs are required in this process. Efficient hyphopodium formation is required for the punctual internalization of hyphae into roots and maintaining the expansion of colonization.
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Affiliation(s)
- Yoshihiro Kobae
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657 Japan
- Hokkaido Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 1 Hitsujigaoka, Toyohira-ku, Sapporo, Hokkaido, 062-8555 Japan
| | - Hiromu Kameoka
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657 Japan
- Division of Symbiotic Systems, National Institute for Basic Biology, 38 Nishigonaka, Myodaiji, Okazaki 444-8585, Aichi, Japan
| | - Yusaku Sugimura
- Faculty of Agriculture, Shinshu University, Minamiminowa, Nagano, 399-4598 Japan
| | - Katsuharu Saito
- Faculty of Agriculture, Shinshu University, Minamiminowa, Nagano, 399-4598 Japan
| | - Ryo Ohtomo
- Hokkaido Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 1 Hitsujigaoka, Toyohira-ku, Sapporo, Hokkaido, 062-8555 Japan
| | - Toru Fujiwara
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657 Japan
| | - Junko Kyozuka
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657 Japan
- Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, 980-8577 Japan
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56
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Diédhiou I, Diouf D. Transcription factors network in root endosymbiosis establishment and development. World J Microbiol Biotechnol 2018; 34:37. [PMID: 29450655 DOI: 10.1007/s11274-018-2418-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2017] [Accepted: 01/29/2018] [Indexed: 11/29/2022]
Abstract
Root endosymbioses are mutualistic interactions between plants and the soil microorganisms (Fungus, Frankia or Rhizobium) that lead to the formation of nitrogen-fixing root nodules and/or arbuscular mycorrhiza. These interactions enable many species to survive in different marginal lands to overcome the nitrogen-and/or phosphorus deficient environment and can potentially reduce the chemical fertilizers used in agriculture which gives them an economic, social and environmental importance. The formation and the development of these structures require the mediation of specific gene products among which the transcription factors play a key role. Three of these transcription factors, viz., CYCLOPS, NSP1 and NSP2 are well conserved between actinorhizal, legume, non-legume and mycorrhizal symbioses. They interact with DELLA proteins to induce the expression of NIN in nitrogen fixing symbiosis or RAM1 in mycorrhizal symbiosis. Recently, the small non coding RNA including micro RNAs (miRNAs) have emerged as major regulators of root endosymbioses. Among them, miRNA171 targets NSP2, a TF conserved in actinorhizal, legume, non-legume and mycorrhizal symbioses. This review will also focus on the recent advances carried out on the biological function of others transcription factors during the root pre-infection/pre-contact, infection or colonization. Their role in nodule formation and AM development will also be described.
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Affiliation(s)
- Issa Diédhiou
- Laboratoire Campus de Biotecnologies Végétales, Département de Biologie Végétale, Faculté des Sciences et Techniques, Université Cheikh Anta Diop, Dakar-Fann, Senegal.
| | - Diaga Diouf
- Laboratoire Campus de Biotecnologies Végétales, Département de Biologie Végétale, Faculté des Sciences et Techniques, Université Cheikh Anta Diop, Dakar-Fann, Senegal
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57
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Vangelisti A, Natali L, Bernardi R, Sbrana C, Turrini A, Hassani-Pak K, Hughes D, Cavallini A, Giovannetti M, Giordani T. Transcriptome changes induced by arbuscular mycorrhizal fungi in sunflower (Helianthus annuus L.) roots. Sci Rep 2018; 8:4. [PMID: 29311719 PMCID: PMC5758643 DOI: 10.1038/s41598-017-18445-0] [Citation(s) in RCA: 69] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Accepted: 12/08/2017] [Indexed: 01/11/2023] Open
Abstract
Arbuscular mycorrhizal (AM) fungi are essential elements of soil fertility, plant nutrition and productivity, facilitating soil mineral nutrient uptake. Helianthus annuus is a non-model, widely cultivated species. Here we used an RNA-seq approach for evaluating gene expression variation at early and late stages of mycorrhizal establishment in sunflower roots colonized by the arbuscular fungus Rhizoglomus irregulare. mRNA was isolated from roots of plantlets at 4 and 16 days after inoculation with the fungus. cDNA libraries were built and sequenced with Illumina technology. Differential expression analysis was performed between control and inoculated plants. Overall 726 differentially expressed genes (DEGs) between inoculated and control plants were retrieved. The number of up-regulated DEGs greatly exceeded the number of down-regulated DEGs and this difference increased in later stages of colonization. Several DEGs were specifically involved in known mycorrhizal processes, such as membrane transport, cell wall shaping, and other. We also found previously unidentified mycorrhizal-induced transcripts. The most important DEGs were carefully described in order to hypothesize their roles in AM symbiosis. Our data add a valuable contribution for deciphering biological processes related to beneficial fungi and plant symbiosis, adding an Asteraceae, non-model species for future comparative functional genomics studies.
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Affiliation(s)
- Alberto Vangelisti
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Lucia Natali
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Rodolfo Bernardi
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Cristiana Sbrana
- CNR, Institute of Agricultural Biology and Biotechnology UOS Pisa, Pisa, Italy
| | - Alessandra Turrini
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | | | - David Hughes
- Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ, UK
| | - Andrea Cavallini
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Manuela Giovannetti
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy
| | - Tommaso Giordani
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, I-56124, Pisa, Italy.
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58
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Roth R, Paszkowski U. Plant carbon nourishment of arbuscular mycorrhizal fungi. CURRENT OPINION IN PLANT BIOLOGY 2017; 39:50-56. [PMID: 28601651 DOI: 10.1016/j.pbi.2017.05.008] [Citation(s) in RCA: 89] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2017] [Revised: 05/07/2017] [Accepted: 05/19/2017] [Indexed: 05/02/2023]
Abstract
Reciprocal nutrient exchange between the majority of land plants and arbucular mycorrhizal (AM) fungi is the cornerstone of a stable symbiosis. To date, a dogma in the comprehension of AM fungal nourishment has been delivery of host organic carbon in the form of sugars. More recently a role for lipids as alternative carbon source or as a signalling molecule during AM symbiosis was proposed. Here we review the symbiotic requirement for carbohydrates and lipids across developmental stages of the AM symbiosis. We present a role for carbohydrate metabolism and signalling to maintain intraradical fungal growth, as opposed to lipid uptake at the arbuscule as an indispensible requirement for completion of the AM fungal life cycle.
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Affiliation(s)
- Ronelle Roth
- Department of Plant Sciences, Downing Street, Cambridge CB2 3EA, United Kingdom
| | - Uta Paszkowski
- Department of Plant Sciences, Downing Street, Cambridge CB2 3EA, United Kingdom.
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59
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Wang W, Shi J, Xie Q, Jiang Y, Yu N, Wang E. Nutrient Exchange and Regulation in Arbuscular Mycorrhizal Symbiosis. MOLECULAR PLANT 2017; 10:1147-1158. [PMID: 28782719 DOI: 10.1016/j.molp.2017.07.012] [Citation(s) in RCA: 196] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2017] [Revised: 07/29/2017] [Accepted: 07/31/2017] [Indexed: 05/19/2023]
Abstract
Most land plants form symbiotic associations with arbuscular mycorrhizal (AM) fungi. These are the most common and widespread terrestrial plant symbioses, which have a global impact on plant mineral nutrition. The establishment of AM symbiosis involves recognition of the two partners and bidirectional transport of different mineral and carbon nutrients through the symbiotic interfaces within the host root cells. Intriguingly, recent discoveries have highlighted that lipids are transferred from the plant host to AM fungus as a major carbon source. In this review, we discuss the transporter-mediated transfer of carbon, nitrogen, phosphate, potassium and sulfate, and present hypotheses pertaining to the potential regulatory mechanisms of nutrient exchange in AM symbiosis. Current challenges and future perspectives on AM symbiosis research are also discussed.
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Affiliation(s)
- Wanxiao Wang
- College of Life and Environment Sciences, Shanghai Normal University, Shanghai 200234, China; National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Jincai Shi
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Qiujin Xie
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Yina Jiang
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Nan Yu
- College of Life and Environment Sciences, Shanghai Normal University, Shanghai 200234, China.
| | - Ertao Wang
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China.
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60
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Rich MK, Nouri E, Courty PE, Reinhardt D. Diet of Arbuscular Mycorrhizal Fungi: Bread and Butter? TRENDS IN PLANT SCIENCE 2017. [PMID: 28622919 DOI: 10.1016/j.tplants.2017.05.008] [Citation(s) in RCA: 87] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Most plants entertain mutualistic interactions known as arbuscular mycorrhiza (AM) with soil fungi (Glomeromycota) which provide them with mineral nutrients in exchange for reduced carbon from the plant. Mycorrhizal roots represent strong carbon sinks in which hexoses are transferred from the plant host to the fungus. However, most of the carbon in AM fungi is stored in the form of lipids. The absence of the type I fatty acid synthase (FAS-I) complex from the AM fungal model species Rhizophagus irregularis suggests that lipids may also have a role in nutrition of the fungal partner. This hypothesis is supported by the concerted induction of host genes involved in lipid metabolism. We explore the possible roles of lipids in the light of recent literature on AM symbiosis.
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Affiliation(s)
- Mélanie K Rich
- Department of Biology, University of Fribourg, Route Albert-Gockel 3, 1700 Fribourg, Switzerland
| | - Eva Nouri
- Department of Biology, University of Fribourg, Route Albert-Gockel 3, 1700 Fribourg, Switzerland
| | - Pierre-Emmanuel Courty
- Department of Biology, University of Fribourg, Route Albert-Gockel 3, 1700 Fribourg, Switzerland; Present address: Agroécologie, AgroSupDijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université de Bourgogne Franche-Comté, 21000 Dijon, France
| | - Didier Reinhardt
- Department of Biology, University of Fribourg, Route Albert-Gockel 3, 1700 Fribourg, Switzerland.
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61
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Keymer A, Pimprikar P, Wewer V, Huber C, Brands M, Bucerius SL, Delaux PM, Klingl V, Röpenack-Lahaye EV, Wang TL, Eisenreich W, Dörmann P, Parniske M, Gutjahr C. Lipid transfer from plants to arbuscular mycorrhiza fungi. eLife 2017. [PMID: 28726631 DOI: 10.7554/elife.29107.051] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/08/2023] Open
Abstract
Arbuscular mycorrhiza (AM) symbioses contribute to global carbon cycles as plant hosts divert up to 20% of photosynthate to the obligate biotrophic fungi. Previous studies suggested carbohydrates as the only form of carbon transferred to the fungi. However, de novo fatty acid (FA) synthesis has not been observed in AM fungi in absence of the plant. In a forward genetic approach, we identified two Lotus japonicus mutants defective in AM-specific paralogs of lipid biosynthesis genes (KASI and GPAT6). These mutants perturb fungal development and accumulation of emblematic fungal 16:1ω5 FAs. Using isotopolog profiling we demonstrate that 13C patterns of fungal FAs recapitulate those of wild-type hosts, indicating cross-kingdom lipid transfer from plants to fungi. This transfer of labelled FAs was not observed for the AM-specific lipid biosynthesis mutants. Thus, growth and development of beneficial AM fungi is not only fueled by sugars but depends on lipid transfer from plant hosts.
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Affiliation(s)
- Andreas Keymer
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | - Priya Pimprikar
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | - Vera Wewer
- Institute of Molecular Physiology and Biotechnology of Plants, University of Bonn, Bonn, Germany
| | - Claudia Huber
- Biochemistry, Technical University Munich, Garching, Germany
| | - Mathias Brands
- Institute of Molecular Physiology and Biotechnology of Plants, University of Bonn, Bonn, Germany
| | - Simone L Bucerius
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | - Pierre-Marc Delaux
- Laboratoire de Recherche en Sciences Végétale, Centre National de la Recherche Scientifique, Toulouse, France
| | - Verena Klingl
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | | | - Trevor L Wang
- John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | | | - Peter Dörmann
- Institute of Molecular Physiology and Biotechnology of Plants, University of Bonn, Bonn, Germany
| | - Martin Parniske
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | - Caroline Gutjahr
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
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Keymer A, Pimprikar P, Wewer V, Huber C, Brands M, Bucerius SL, Delaux PM, Klingl V, von Röpenack-Lahaye E, Wang TL, Eisenreich W, Dörmann P, Parniske M, Gutjahr C. Lipid transfer from plants to arbuscular mycorrhiza fungi. eLife 2017; 6:e29107. [PMID: 28726631 PMCID: PMC5559270 DOI: 10.7554/elife.29107] [Citation(s) in RCA: 217] [Impact Index Per Article: 31.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2017] [Accepted: 07/13/2017] [Indexed: 12/16/2022] Open
Abstract
Arbuscular mycorrhiza (AM) symbioses contribute to global carbon cycles as plant hosts divert up to 20% of photosynthate to the obligate biotrophic fungi. Previous studies suggested carbohydrates as the only form of carbon transferred to the fungi. However, de novo fatty acid (FA) synthesis has not been observed in AM fungi in absence of the plant. In a forward genetic approach, we identified two Lotus japonicus mutants defective in AM-specific paralogs of lipid biosynthesis genes (KASI and GPAT6). These mutants perturb fungal development and accumulation of emblematic fungal 16:1ω5 FAs. Using isotopolog profiling we demonstrate that 13C patterns of fungal FAs recapitulate those of wild-type hosts, indicating cross-kingdom lipid transfer from plants to fungi. This transfer of labelled FAs was not observed for the AM-specific lipid biosynthesis mutants. Thus, growth and development of beneficial AM fungi is not only fueled by sugars but depends on lipid transfer from plant hosts.
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Affiliation(s)
- Andreas Keymer
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | - Priya Pimprikar
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | - Vera Wewer
- Institute of Molecular Physiology and Biotechnology of Plants, University of Bonn, Bonn, Germany
| | - Claudia Huber
- Biochemistry, Technical University Munich, Garching, Germany
| | - Mathias Brands
- Institute of Molecular Physiology and Biotechnology of Plants, University of Bonn, Bonn, Germany
| | - Simone L Bucerius
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | - Pierre-Marc Delaux
- Laboratoire de Recherche en Sciences Végétale, Centre National de la Recherche Scientifique, Toulouse, France
| | - Verena Klingl
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | | | - Trevor L Wang
- John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | | | - Peter Dörmann
- Institute of Molecular Physiology and Biotechnology of Plants, University of Bonn, Bonn, Germany
| | - Martin Parniske
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
| | - Caroline Gutjahr
- Faculty of Biology, Genetics, LMU Munich, Biocenter Martinsried, Munich, Germany
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Jiang Y, Wang W, Xie Q, Liu N, Liu L, Wang D, Zhang X, Yang C, Chen X, Tang D, Wang E. Plants transfer lipids to sustain colonization by mutualistic mycorrhizal and parasitic fungi. Science 2017; 356:1172-1175. [DOI: 10.1126/science.aam9970] [Citation(s) in RCA: 387] [Impact Index Per Article: 55.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2017] [Accepted: 05/12/2017] [Indexed: 12/14/2022]
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Bravo A, Brands M, Wewer V, Dörmann P, Harrison MJ. Arbuscular mycorrhiza-specific enzymes FatM and RAM2 fine-tune lipid biosynthesis to promote development of arbuscular mycorrhiza. THE NEW PHYTOLOGIST 2017; 214:1631-1645. [PMID: 28380681 DOI: 10.1111/nph.14533] [Citation(s) in RCA: 174] [Impact Index Per Article: 24.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2016] [Accepted: 02/16/2017] [Indexed: 05/04/2023]
Abstract
During arbuscular mycorrhizal symbiosis (AMS), considerable amounts of lipids are generated, modified and moved within the cell to accommodate the fungus in the root, and it has also been suggested that lipids are delivered to the fungus. To determine the mechanisms by which root cells redirect lipid biosynthesis during AMS we analyzed the roles of two lipid biosynthetic enzymes (FatM and RAM2) and an ABC transporter (STR) that are required for symbiosis and conserved uniquely in plants that engage in AMS. Complementation analyses indicated that the biochemical function of FatM overlaps with that of other Fat thioesterases, in particular FatB. The essential role of FatM in AMS was a consequence of timing and magnitude of its expression. Lipid profiles of fatm and ram2 suggested that FatM increases the outflow of 16:0 fatty acids from the plastid, for subsequent use by RAM2 to produce 16:0 β-monoacylglycerol. Thus, during AMS, high-level, specific expression of key lipid biosynthetic enzymes located in the plastid and the endoplasmic reticulum enables the root cell to fine-tune lipid biosynthesis to increase the production of β-monoacylglycerols. We propose a model in which β-monoacylglycerols, or a derivative thereof, are exported out of the root cell across the periarbuscular membrane for ultimate use by the fungus.
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Affiliation(s)
- Armando Bravo
- Boyce Thompson Institute, 533 Tower Road, Ithaca, NY, 14853, USA
| | - Mathias Brands
- Institute of Molecular Physiology and Biotechnology of Plants, University of Bonn, Karlrobert-Kreiten-Strasse 13, 53115, Bonn, Germany
| | - Vera Wewer
- Institute of Molecular Physiology and Biotechnology of Plants, University of Bonn, Karlrobert-Kreiten-Strasse 13, 53115, Bonn, Germany
| | - Peter Dörmann
- Institute of Molecular Physiology and Biotechnology of Plants, University of Bonn, Karlrobert-Kreiten-Strasse 13, 53115, Bonn, Germany
| | - Maria J Harrison
- Boyce Thompson Institute, 533 Tower Road, Ithaca, NY, 14853, USA
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65
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López-Ráez JA, Shirasu K, Foo E. Strigolactones in Plant Interactions with Beneficial and Detrimental Organisms: The Yin and Yang. TRENDS IN PLANT SCIENCE 2017; 22:527-537. [PMID: 28400173 DOI: 10.1016/j.tplants.2017.03.011] [Citation(s) in RCA: 93] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2016] [Revised: 03/13/2017] [Accepted: 03/20/2017] [Indexed: 05/20/2023]
Abstract
Strigolactones (SLs) are plant hormones that have important roles as modulators of plant development. They were originally described as ex planta signaling molecules in the rhizosphere that induce the germination of parasitic plants, a role that was later linked to encouraging the beneficial symbiosis with arbuscular mycorrhizal (AM) fungi. Recently, the focus has shifted to examining the role of SLs in plant-microbe interactions, and has revealed roles for SLs in the association of legumes with nitrogen-fixing rhizobacteria and in interactions with disease-causing pathogens. Here, we examine the role of SLs in plant interactions with beneficial and detrimental organisms, and propose possible future biotechnological applications.
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Affiliation(s)
- Juan A López-Ráez
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín-Consejo Superior de Investigaciones Científicas (EEZ-CSIC), Profesor Albareda 1, Granada 18008, Spain.
| | - Ken Shirasu
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan
| | - Eloise Foo
- School of Biological Sciences, University of Tasmania, Hobart, Tasmania 7001, Australia
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66
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Abstract
Strigolactones are a structurally diverse class of plant hormones that control many aspects of shoot and root growth. Strigolactones are also exuded by plants into the rhizosphere, where they promote symbiotic interactions with arbuscular mycorrhizal fungi and germination of root parasitic plants in the Orobanchaceae family. Therefore, understanding how strigolactones are made, transported, and perceived may lead to agricultural innovations as well as a deeper knowledge of how plants function. Substantial progress has been made in these areas over the past decade. In this review, we focus on the molecular mechanisms, core developmental roles, and evolutionary history of strigolactone signaling. We also propose potential translational applications of strigolactone research to agriculture.
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Affiliation(s)
- Mark T Waters
- School of Molecular Sciences and Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Perth 6009, Australia;
| | - Caroline Gutjahr
- Genetics, Faculty of Biology, LMU Munich, 82152 Martinsried, Germany;
| | - Tom Bennett
- School of Biology, University of Leeds, Leeds LS2 9JT, United Kingdom;
| | - David C Nelson
- Department of Botany and Plant Sciences, University of California, Riverside, California 92521;
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67
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Kovalchuk A, Lee YH, Asiegbu FO. Diversity and evolution of ABC proteins in basidiomycetes. Mycologia 2017; 105:1456-70. [DOI: 10.3852/13-001] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Andriy Kovalchuk
- Department of Forest Sciences, P.O. Box 27, Latokartanonkaari 7, 00014 University of Helsinki, Helsinki, Finland
| | - Yong-Hwan Lee
- Department of Agricultural Biotechnology, Seoul National University Seoul 151-921, Korea
| | - Fred O. Asiegbu
- Department of Forest Sciences, P.O. Box 27, Latokartanonkaari 7, 00014 University of Helsinki, Helsinki, Finland
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68
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Abe K, Ichikawa H. Gene Overexpression Resources in Cereals for Functional Genomics and Discovery of Useful Genes. FRONTIERS IN PLANT SCIENCE 2016; 7:1359. [PMID: 27708649 PMCID: PMC5030214 DOI: 10.3389/fpls.2016.01359] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2016] [Accepted: 08/26/2016] [Indexed: 05/12/2023]
Abstract
Identification and elucidation of functions of plant genes is valuable for both basic and applied research. In addition to natural variation in model plants, numerous loss-of-function resources have been produced by mutagenesis with chemicals, irradiation, or insertions of transposable elements or T-DNA. However, we may be unable to observe loss-of-function phenotypes for genes with functionally redundant homologs and for those essential for growth and development. To offset such disadvantages, gain-of-function transgenic resources have been exploited. Activation-tagged lines have been generated using obligatory overexpression of endogenous genes by random insertion of an enhancer. Recent progress in DNA sequencing technology and bioinformatics has enabled the preparation of genomewide collections of full-length cDNAs (fl-cDNAs) in some model species. Using the fl-cDNA clones, a novel gain-of-function strategy, Fl-cDNA OvereXpressor gene (FOX)-hunting system, has been developed. A mutant phenotype in a FOX line can be directly attributed to the overexpressed fl-cDNA. Investigating a large population of FOX lines could reveal important genes conferring favorable phenotypes for crop breeding. Alternatively, a unique loss-of-function approach Chimeric REpressor gene Silencing Technology (CRES-T) has been developed. In CRES-T, overexpression of a chimeric repressor, composed of the coding sequence of a transcription factor (TF) and short peptide designated as the repression domain, could interfere with the action of endogenous TF in plants. Although plant TFs usually consist of gene families, CRES-T is effective, in principle, even for the TFs with functional redundancy. In this review, we focus on the current status of the gene-overexpression strategies and resources for identifying and elucidating novel functions of cereal genes. We discuss the potential of these research tools for identifying useful genes and phenotypes for application in crop breeding.
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Affiliation(s)
| | - Hiroaki Ichikawa
- Institute of Agrobiological Sciences, National Agriculture and Food Research OrganizationTsukuba, Japan
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69
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Tsuzuki S, Handa Y, Takeda N, Kawaguchi M. Strigolactone-Induced Putative Secreted Protein 1 Is Required for the Establishment of Symbiosis by the Arbuscular Mycorrhizal Fungus Rhizophagus irregularis. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2016; 29:277-86. [PMID: 26757243 DOI: 10.1094/mpmi-10-15-0234-r] [Citation(s) in RCA: 71] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Arbuscular mycorrhizal (AM) symbiosis is the most widespread association between plants and fungi. To provide novel insights into the molecular mechanisms of AM symbiosis, we screened and investigated genes of the AM fungus Rhizophagus irregularis that contribute to the infection of host plants. R. irregularis genes involved in the infection were explored by RNA-sequencing (RNA-seq) analysis. One of the identified genes was then characterized by a reverse genetic approach using host-induced gene silencing (HIGS), which causes RNA interference in the fungus via the host plant. The RNA-seq analysis revealed that 19 genes are up-regulated by both treatment with strigolactone (SL) (a plant symbiotic signal) and symbiosis. Eleven of the 19 genes were predicted to encode secreted proteins and, of these, SL-induced putative secreted protein 1 (SIS1) showed the largest induction under both conditions. In hairy roots of Medicago truncatula, SIS1 expression is knocked down by HIGS, resulting in significant suppression of colonization and formation of stunted arbuscules. These results suggest that SIS1 is a putative secreted protein that is induced in a wide spatiotemporal range including both the presymbiotic and symbiotic stages and that SIS1 positively regulates colonization of host plants by R. irregularis.
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Affiliation(s)
- Syusaku Tsuzuki
- 1 Division of Symbiotic Systems, National Institute for Basic Biology, Nishigonaka 38, Myodaiji, Okazaki 444-8585, Aichi, Japan; and
- 2 Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Nishigonaka 38, Myodaiji, Okazaki 444-8585, Aichi, Japan
| | - Yoshihiro Handa
- 1 Division of Symbiotic Systems, National Institute for Basic Biology, Nishigonaka 38, Myodaiji, Okazaki 444-8585, Aichi, Japan; and
| | - Naoya Takeda
- 1 Division of Symbiotic Systems, National Institute for Basic Biology, Nishigonaka 38, Myodaiji, Okazaki 444-8585, Aichi, Japan; and
- 2 Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Nishigonaka 38, Myodaiji, Okazaki 444-8585, Aichi, Japan
| | - Masayoshi Kawaguchi
- 1 Division of Symbiotic Systems, National Institute for Basic Biology, Nishigonaka 38, Myodaiji, Okazaki 444-8585, Aichi, Japan; and
- 2 Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Nishigonaka 38, Myodaiji, Okazaki 444-8585, Aichi, Japan
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70
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Wu P, Wu Y, Liu CC, Liu LW, Ma FF, Wu XY, Wu M, Hang YY, Chen JQ, Shao ZQ, Wang B. Identification of Arbuscular Mycorrhiza (AM)-Responsive microRNAs in Tomato. FRONTIERS IN PLANT SCIENCE 2016; 7:429. [PMID: 27066061 PMCID: PMC4814767 DOI: 10.3389/fpls.2016.00429] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2016] [Accepted: 03/18/2016] [Indexed: 05/25/2023]
Abstract
A majority of land plants can form symbiosis with arbuscular mycorrhizal (AM) fungi. MicroRNAs (miRNAs) have been implicated to regulate this process in legumes, but their involvement in non-legume species is largely unknown. In this study, by performing deep sequencing of sRNA libraries in tomato roots and comparing with tomato genome, a total of 700 potential miRNAs were predicted, among them, 187 are known plant miRNAs that have been previously deposited in miRBase. Unlike the profiles in other plants such as rice and Arabidopsis, a large proportion of predicted tomato miRNAs was 24 nt in length. A similar pattern was observed in the potato genome but not in tobacco, indicating a Solanum genus-specific expansion of 24-nt miRNAs. About 40% identified tomato miRNAs showed significantly altered expressions upon Rhizophagus irregularis inoculation, suggesting the potential roles of these novel miRNAs in AM symbiosis. The differential expression of five known and six novel miRNAs were further validated using qPCR analysis. Interestingly, three up-regulated known tomato miRNAs belong to a known miR171 family, a member of which has been reported in Medicago truncatula to regulate AM symbiosis. Thus, the miR171 family likely regulates AM symbiosis conservatively across different plant lineages. More than 1000 genes targeted by potential AM-responsive miRNAs were provided and their roles in AM symbiosis are worth further exploring.
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Affiliation(s)
- Ping Wu
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
| | - Yue Wu
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
| | - Cheng-Chen Liu
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
| | - Li-Wei Liu
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
| | - Fang-Fang Ma
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
| | - Xiao-Yi Wu
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
| | - Mian Wu
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
| | - Yue-Yu Hang
- Institute of Botany, Jiangsu Province and Chinese Academy of SciencesNanjing, China
| | - Jian-Qun Chen
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
| | - Zhu-Qing Shao
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
| | - Bin Wang
- State Key Laboratory of Pharmaceutical Biotechnology, Laboratory of Plant Genetics and Molecular Evolution, School of Life Sciences, Nanjing UniversityNanjing, China
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Pimprikar P, Carbonnel S, Paries M, Katzer K, Klingl V, Bohmer MJ, Karl L, Floss DS, Harrison MJ, Parniske M, Gutjahr C. A CCaMK-CYCLOPS-DELLA Complex Activates Transcription of RAM1 to Regulate Arbuscule Branching. Curr Biol 2016; 26:987-98. [PMID: 27020747 DOI: 10.1016/j.cub.2016.01.069] [Citation(s) in RCA: 108] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2015] [Revised: 12/15/2015] [Accepted: 01/28/2016] [Indexed: 01/19/2023]
Abstract
Intracellular arbuscular mycorrhiza symbiosis between plants and glomeromycotan fungi leads to formation of highly branched fungal arbuscules that release mineral nutrients to the plant host. Their development is regulated in plants by a mechanistically unresolved interplay between symbiosis, nutrient, and hormone (gibberellin) signaling. Using a positional cloning strategy and a retrotransposon insertion line, we identify two novel alleles of Lotus japonicus REDUCED ARBUSCULAR MYCORRHIZA1 (RAM1) encoding a GRAS protein. We confirm that RAM1 is a central regulator of arbuscule development: arbuscule branching is arrested in L. japonicus ram1 mutants, and ectopic expression of RAM1 activates genes critical for arbuscule development in the absence of fungal symbionts. Epistasis analysis places RAM1 downstream of CCaMK, CYCLOPS, and DELLA because ectopic expression of RAM1 restores arbuscule formation in cyclops mutants and in the presence of suppressive gibberellin. The corresponding proteins form a complex that activates RAM1 expression via binding of CYCLOPS to a cis element in the RAM1 promoter. We thus reveal a transcriptional cascade in arbuscule development that employs the promoter of RAM1 as integrator of symbiotic (transmitted via CCaMK and CYCLOPS) and hormonal (gibberellin) signals.
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Affiliation(s)
- Priya Pimprikar
- Faculty of Biology, Genetics, Biocenter Martinsried, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany
| | - Samy Carbonnel
- Faculty of Biology, Genetics, Biocenter Martinsried, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany
| | - Michael Paries
- Faculty of Biology, Genetics, Biocenter Martinsried, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany
| | - Katja Katzer
- Faculty of Biology, Genetics, Biocenter Martinsried, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany
| | - Verena Klingl
- Faculty of Biology, Genetics, Biocenter Martinsried, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany
| | - Monica J Bohmer
- Faculty of Biology, Genetics, Biocenter Martinsried, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany
| | - Leonhard Karl
- Faculty of Biology, Genetics, Biocenter Martinsried, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany
| | - Daniela S Floss
- Boyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, NY 14853, USA
| | - Maria J Harrison
- Boyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, NY 14853, USA
| | - Martin Parniske
- Faculty of Biology, Genetics, Biocenter Martinsried, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany
| | - Caroline Gutjahr
- Faculty of Biology, Genetics, Biocenter Martinsried, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany.
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72
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Kovalchuk A, Kohler A, Martin F, Asiegbu FO. Diversity and evolution of ABC proteins in mycorrhiza-forming fungi. BMC Evol Biol 2015; 15:249. [PMID: 26707138 PMCID: PMC4692070 DOI: 10.1186/s12862-015-0526-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2015] [Accepted: 10/28/2015] [Indexed: 11/22/2022] Open
Abstract
Background Transporter proteins are predicted to have an important role in the mycorrhizal symbiosis, due to the fact that this type of an interaction between plants and fungi requires a continuous nutrient and signalling exchange. ABC transporters are one of the large groups of transporter proteins found both in plants and in fungi. The crucial role of plant ABC transporters in the formation of the mycorrhizal symbiosis has been demonstrated recently. Some of the fungal ABC transporter-encoding genes are also induced during the mycorrhiza formation. However, no experimental evidences of the direct involvement of fungal ABC transporters in this process are available so far. To facilitate the identification of fungal ABC proteins with a potential role in the establishment of the mycorrhizal symbiosis, we have performed an inventory of the ABC protein-encoding genes in the genomes of 25 species of mycorrhiza-forming fungi. Results We have identified, manually annotated and curated more than 1300 gene models of putative ABC protein-encoding genes. Out of those, more than 1000 models are predicted to encode functional proteins, whereas about 300 models represent gene fragments or putative pseudogenes. We have also performed the phylogenetic analysis of the identified sequences. The sets of ABC proteins in the mycorrhiza-forming species were compared to the related saprotrophic or plant-pathogenic fungal species. Our results demonstrate the high diversity of ABC genes in the genomes of mycorrhiza-forming fungi. Via comparison of transcriptomics data from different species, we have identified candidate groups of ABC transporters that might have a role in the process of the mycorrhiza formation. Conclusions Results of our inventory will facilitate the identification of fungal transporters with a role in the mycorrhiza formation. We also provide the first data on ABC protein-coding genes for the phylum Glomeromycota and for orders Pezizales, Atheliales, Cantharellales and Sebacinales, contributing to the better knowledge of the diversity of this protein family within the fungal kingdom. Electronic supplementary material The online version of this article (doi:10.1186/s12862-015-0526-7) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Andriy Kovalchuk
- Department of Forest Sciences, University of Helsinki, P.O. Box 27, FIN-00014, Helsinki, Finland.
| | - Annegret Kohler
- UMR 1136, INRA/Université de Lorraine, Interactions Arbres/Microorganismes, INRA, Institut National de la Recherche Agronomique, Centre INRA de Nancy, 54280, Champenoux, France.
| | - Francis Martin
- UMR 1136, INRA/Université de Lorraine, Interactions Arbres/Microorganismes, INRA, Institut National de la Recherche Agronomique, Centre INRA de Nancy, 54280, Champenoux, France.
| | - Fred O Asiegbu
- Department of Forest Sciences, University of Helsinki, P.O. Box 27, FIN-00014, Helsinki, Finland.
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73
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Nakagawa T, Imaizumi-Anraku H. Rice arbuscular mycorrhiza as a tool to study the molecular mechanisms of fungal symbiosis and a potential target to increase productivity. RICE (NEW YORK, N.Y.) 2015; 8:32. [PMID: 26516078 PMCID: PMC4626465 DOI: 10.1186/s12284-015-0067-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2015] [Accepted: 10/22/2015] [Indexed: 05/08/2023]
Abstract
Rice (Oryza sativa L.) is a monocot model crop for cereal molecular biology. Following the emergence of molecular genetics of arbuscular mycorrhizal (AM) symbiosis in model legumes in the 1990s, studies on rice genetic resources have considerably contributed to our understanding of the molecular mechanisms and evolution of root intracellular symbioses.In this review, we trace the history of these studies and suggest the potential utility of AM symbiosis for improvement in rice productivity.
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Affiliation(s)
- Tomomi Nakagawa
- Division of Symbiotic Systems, National Institute for Basic Biology, Nishigonaka 38, Myodaiji, Okazaki, Aichi, 444-8585, Japan
- Division of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Aichi, 464-8602, Japan
| | - Haruko Imaizumi-Anraku
- Division of Plant Sicences, National Institute of Agrobiological Sciences, 2-1-2 Kannon-dai, Tsukuba, Ibaraki, 305-8602, Japan.
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74
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Fiorilli V, Vallino M, Biselli C, Faccio A, Bagnaresi P, Bonfante P. Host and non-host roots in rice: cellular and molecular approaches reveal differential responses to arbuscular mycorrhizal fungi. FRONTIERS IN PLANT SCIENCE 2015; 6:636. [PMID: 26322072 PMCID: PMC4534827 DOI: 10.3389/fpls.2015.00636] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2015] [Accepted: 07/31/2015] [Indexed: 05/03/2023]
Abstract
Oryza sativa, a model plant for Arbuscular Mycorrhizal (AM) symbiosis, has both host and non-host roots. Large lateral (LLR) and fine lateral (FLR) roots display opposite responses: LLR support AM colonization, but FLR do not. Our research aimed to study the molecular, morphological and physiological aspects related to the non-host behavior of FLR. RNA-seq analysis revealed that LLR and FLR displayed divergent expression profiles, including changes in many metabolic pathways. Compared with LLR, FLR showed down-regulation of genes instrumental for AM establishment and gibberellin signaling, and a higher expression of nutrient transporters. Consistent with the transcriptomic data, FLR had higher phosphorus content. Light and electron microscopy demonstrated that, surprisingly, in the Selenio cultivar, FLR have a two-layered cortex, which is theoretically compatible with AM colonization. According to RNA-seq, a gibberellin inhibitor treatment increased anticlinal divisions leading to a higher number of cortex cells in FLR. We propose that some of the differentially regulated genes that lead to the anatomical and physiological properties of the two root types also function as genetic factors regulating fungal colonization. The rice root apparatus offers a unique tool to study AM symbiosis, allowing direct comparisons of host and non-host roots in the same individual plant.
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Affiliation(s)
- Valentina Fiorilli
- Department of Life Sciences and System Biology, University of TurinTurin, Italy
- Institute for Sustainable Plant Protection–National Research CouncilTurin, Italy
| | - Marta Vallino
- Institute for Sustainable Plant Protection–National Research CouncilTurin, Italy
| | - Chiara Biselli
- Genomics Research Centre - Consiglio per la Ricerca e la Sperimentazione in AgricolturaFiorenzuola d'Arda, Italy
| | - Antonella Faccio
- Institute for Sustainable Plant Protection–National Research CouncilTurin, Italy
| | - Paolo Bagnaresi
- Genomics Research Centre - Consiglio per la Ricerca e la Sperimentazione in AgricolturaFiorenzuola d'Arda, Italy
| | - Paola Bonfante
- Department of Life Sciences and System Biology, University of TurinTurin, Italy
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75
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Handa Y, Nishide H, Takeda N, Suzuki Y, Kawaguchi M, Saito K. RNA-seq Transcriptional Profiling of an Arbuscular Mycorrhiza Provides Insights into Regulated and Coordinated Gene Expression in Lotus japonicus and Rhizophagus irregularis. PLANT & CELL PHYSIOLOGY 2015; 56:1490-511. [PMID: 26009592 DOI: 10.1093/pcp/pcv071] [Citation(s) in RCA: 91] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2014] [Accepted: 05/13/2015] [Indexed: 05/03/2023]
Abstract
Gene expression during arbuscular mycorrhizal development is highly orchestrated in both plants and arbuscular mycorrhizal fungi. To elucidate the gene expression profiles of the symbiotic association, we performed a digital gene expression analysis of Lotus japonicus and Rhizophagus irregularis using a HiSeq 2000 next-generation sequencer with a Cufflinks assembly and de novo transcriptome assembly. There were 3,641 genes differentially expressed during arbuscular mycorrhizal development in L. japonicus, approximately 80% of which were up-regulated. The up-regulated genes included secreted proteins, transporters, proteins involved in lipid and amino acid metabolism, ribosomes and histones. We also detected many genes that were differentially expressed in small-secreted peptides and transcription factors, which may be involved in signal transduction or transcription regulation during symbiosis. Co-regulated genes between arbuscular mycorrhizal and root nodule symbiosis were not particularly abundant, but transcripts encoding for membrane traffic-related proteins, transporters and iron transport-related proteins were found to be highly co-up-regulated. In transcripts of arbuscular mycorrhizal fungi, expansion of cytochrome P450 was observed, which may contribute to various metabolic pathways required to accommodate roots and soil. The comprehensive gene expression data of both plants and arbuscular mycorrhizal fungi provide a powerful platform for investigating the functional and molecular mechanisms underlying arbuscular mycorrhizal symbiosis.
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Affiliation(s)
- Yoshihiro Handa
- Division of Symbiotic Systems, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan
| | - Hiroyo Nishide
- Data Integration and Analysis Facility, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan
| | - Naoya Takeda
- Division of Symbiotic Systems, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan School of Life Science, SOKENDAI (Graduate University for Advanced Studies), Okazaki, Aichi 444-8585, Japan
| | - Yutaka Suzuki
- Department of Medical Genome Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-8561, Japan
| | - Masayoshi Kawaguchi
- Division of Symbiotic Systems, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan School of Life Science, SOKENDAI (Graduate University for Advanced Studies), Okazaki, Aichi 444-8585, Japan
| | - Katsuharu Saito
- Faculty of Agriculture, Shinshu University, Minamiminowa, Nagano 399-4598, Japan
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76
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Zhang X, Pumplin N, Ivanov S, Harrison MJ. EXO70I Is Required for Development of a Sub-domain of the Periarbuscular Membrane during Arbuscular Mycorrhizal Symbiosis. Curr Biol 2015; 25:2189-95. [PMID: 26234213 DOI: 10.1016/j.cub.2015.06.075] [Citation(s) in RCA: 77] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2015] [Revised: 04/02/2015] [Accepted: 06/30/2015] [Indexed: 12/17/2022]
Abstract
In eukaryotic cells, polarized secretion mediated by exocytotic fusion of membrane vesicles with the plasma membrane is essential for spatially restricted expansion of the plasma membrane and for the delivery of molecules to specific locations at the membrane and/or cell surface. The EXOCYST complex is central to this process, and in yeast, regulation of the EXO70 subunit influences exocytosis and cargo specificity. In contrast to yeast and mammalian cells, plants have upwards of 23 EXO70 genes with largely unknown roles. During arbuscular mycorrhizal (AM) symbiosis, deposition of the plant periarbuscular membrane (PAM) around the fungal arbuscule creates an intracellular membrane interface between the symbionts. The PAM has two major membrane sub-domains, and symbiosis-specific transporter proteins are localized in the branch domain. Currently, the mechanisms and cellular machinery involved in biogenesis of the PAM are largely unknown. Here, we identify an EXO70I protein present exclusively in plants forming AM symbiosis. Medicago truncatula exo70i mutants are unable to support normal arbuscule development, and incorporation of two PAM-resident ABC transporters, STR and STR2, is limited. During arbuscule branching, EXO70I is located in spatially restricted zones adjacent to the PAM around the arbuscule hyphal tips where it interacts with Vapyrin, a plant-specific protein required for arbuscule development. We conclude that EXO70I provides a specific exocytotic capacity necessary for development of the main functional sub-domain of the PAM. Furthermore, in contrast to other eukaryotes, plant EXO70s have evolved distinct specificities and interaction partners to fulfill their specialized secretory requirements.
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Affiliation(s)
- Xinchun Zhang
- Boyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, NY 14853, USA
| | - Nathan Pumplin
- Boyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, NY 14853, USA; Department of Plant Biology, Cornell University, Ithaca, NY 14853, USA
| | - Sergey Ivanov
- Boyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, NY 14853, USA
| | - Maria J Harrison
- Boyce Thompson Institute for Plant Research, 533 Tower Road, Ithaca, NY 14853, USA.
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77
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Xue L, Cui H, Buer B, Vijayakumar V, Delaux PM, Junkermann S, Bucher M. Network of GRAS transcription factors involved in the control of arbuscule development in Lotus japonicus. PLANT PHYSIOLOGY 2015; 167:854-71. [PMID: 25560877 PMCID: PMC4348782 DOI: 10.1104/pp.114.255430] [Citation(s) in RCA: 101] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2014] [Accepted: 12/30/2014] [Indexed: 05/18/2023]
Abstract
Arbuscular mycorrhizal (AM) fungi, in symbiosis with plants, facilitate acquisition of nutrients from the soil to their host. After penetration, intracellular hyphae form fine-branched structures in cortical cells termed arbuscules, representing the major site where bidirectional nutrient exchange takes place between the host plant and fungus. Transcriptional mechanisms underlying this cellular reprogramming are still poorly understood. GRAS proteins are an important family of transcriptional regulators in plants, named after the first three members: GIBBERELLIC ACID-INSENSITIVE, REPRESSOR of GAI, and SCARECROW. Here, we show that among 45 transcription factors up-regulated in mycorrhizal roots of the legume Lotus japonicus, expression of a unique GRAS protein particularly increases in arbuscule-containing cells under low phosphate conditions and displays a phylogenetic pattern characteristic of symbiotic genes. Allelic rad1 mutants display a strongly reduced number of arbuscules, which undergo accelerated degeneration. In further studies, two RAD1-interacting proteins were identified. One of them is the closest homolog of Medicago truncatula, REDUCED ARBUSCULAR MYCORRHIZATION1 (RAM1), which was reported to regulate a glycerol-3-phosphate acyl transferase that promotes cutin biosynthesis to enhance hyphopodia formation. As in M. truncatula, the L. japonicus ram1 mutant lines show compromised AM colonization and stunted arbuscules. Our findings provide, to our knowledge, new insight into the transcriptional program underlying the host's response to AM colonization and propose a function of GRAS transcription factors including RAD1 and RAM1 during arbuscule development.
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Affiliation(s)
- Li Xue
- Botanical Institute, Cologne Biocenter, Cluster of Excellence on Plant Sciences, University of Cologne, D-50674 Cologne, Germany (L.X., B.B.,V.V., S.J., M.B.);Department of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, D-50829 Cologne, Germany (H.C.); andDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706 (P.-M.D.)
| | - Haitao Cui
- Botanical Institute, Cologne Biocenter, Cluster of Excellence on Plant Sciences, University of Cologne, D-50674 Cologne, Germany (L.X., B.B.,V.V., S.J., M.B.);Department of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, D-50829 Cologne, Germany (H.C.); andDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706 (P.-M.D.)
| | - Benjamin Buer
- Botanical Institute, Cologne Biocenter, Cluster of Excellence on Plant Sciences, University of Cologne, D-50674 Cologne, Germany (L.X., B.B.,V.V., S.J., M.B.);Department of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, D-50829 Cologne, Germany (H.C.); andDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706 (P.-M.D.)
| | - Vinod Vijayakumar
- Botanical Institute, Cologne Biocenter, Cluster of Excellence on Plant Sciences, University of Cologne, D-50674 Cologne, Germany (L.X., B.B.,V.V., S.J., M.B.);Department of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, D-50829 Cologne, Germany (H.C.); andDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706 (P.-M.D.)
| | - Pierre-Marc Delaux
- Botanical Institute, Cologne Biocenter, Cluster of Excellence on Plant Sciences, University of Cologne, D-50674 Cologne, Germany (L.X., B.B.,V.V., S.J., M.B.);Department of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, D-50829 Cologne, Germany (H.C.); andDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706 (P.-M.D.)
| | - Stefanie Junkermann
- Botanical Institute, Cologne Biocenter, Cluster of Excellence on Plant Sciences, University of Cologne, D-50674 Cologne, Germany (L.X., B.B.,V.V., S.J., M.B.);Department of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, D-50829 Cologne, Germany (H.C.); andDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706 (P.-M.D.)
| | - Marcel Bucher
- Botanical Institute, Cologne Biocenter, Cluster of Excellence on Plant Sciences, University of Cologne, D-50674 Cologne, Germany (L.X., B.B.,V.V., S.J., M.B.);Department of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, D-50829 Cologne, Germany (H.C.); andDepartment of Agronomy, University of Wisconsin, Madison, Wisconsin 53706 (P.-M.D.)
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78
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Carbonnel S, Gutjahr C. Control of arbuscular mycorrhiza development by nutrient signals. FRONTIERS IN PLANT SCIENCE 2014; 5:462. [PMID: 25309561 PMCID: PMC4160938 DOI: 10.3389/fpls.2014.00462] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2014] [Accepted: 08/26/2014] [Indexed: 05/08/2023]
Affiliation(s)
| | - Caroline Gutjahr
- Faculty of Biology, Genetics, University of Munich (LMU)Martinsried, Germany
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79
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Gutjahr C. Phytohormone signaling in arbuscular mycorhiza development. CURRENT OPINION IN PLANT BIOLOGY 2014; 20:26-34. [PMID: 24853646 DOI: 10.1016/j.pbi.2014.04.003] [Citation(s) in RCA: 104] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2014] [Revised: 04/15/2014] [Accepted: 04/17/2014] [Indexed: 05/20/2023]
Abstract
To establish arbuscular mycorhiza (AM) symbiosis glomeromycotan fungi colonize the interior of roots. This process is associated with developmental changes of root cells as well as fungal hyphae. The formation of fungal colonization-structures and the extent of root colonization are largely under plant control, depending on environmental conditions and the resulting physiological state of the host. Phytohormone signaling pathways are currently emerging as important regulators of AM development. Root exuded strigolactones activate AM fungi before colonization and a host strigolactone receptor component is required for AM development. Auxin quantitatively influences AM colonization and might perform an additional cell-autonomous function in the promotion of arbuscule development. Gibberellin signaling inhibits AM and conversely DELLA proteins are required for AM formation. Given the importance of phytohormone signaling in plant developmental responses to the environment it can be predicted that elucidating how phytohormones regulate AM development will provide a lead into understanding how plants orchestrate AM symbiosis with their physiological needs under changing environmental conditions.
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Affiliation(s)
- Caroline Gutjahr
- Faculty of Biology, Genetics, University of Munich (LMU), Großhaderner Str. 2-4, 82152 Martinsried, Germany.
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80
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Abdallah C, Valot B, Guillier C, Mounier A, Balliau T, Zivy M, van Tuinen D, Renaut J, Wipf D, Dumas-Gaudot E, Recorbet G. The membrane proteome of Medicago truncatula roots displays qualitative and quantitative changes in response to arbuscular mycorrhizal symbiosis. J Proteomics 2014; 108:354-68. [PMID: 24925269 DOI: 10.1016/j.jprot.2014.05.028] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2013] [Revised: 04/07/2014] [Accepted: 05/12/2014] [Indexed: 11/25/2022]
Abstract
UNLABELLED Arbuscular mycorrhizal (AM) symbiosis that associates roots of most land plants with soil-borne fungi (Glomeromycota), is characterized by reciprocal nutritional benefits. Fungal colonization of plant roots induces massive changes in cortical cells where the fungus differentiates an arbuscule, which drives proliferation of the plasma membrane. Despite the recognized importance of membrane proteins in sustaining AM symbiosis, the root microsomal proteome elicited upon mycorrhiza still remains to be explored. In this study, we first examined the qualitative composition of the root membrane proteome of Medicago truncatula after microsome enrichment and subsequent in depth analysis by GeLC-MS/MS. The results obtained highlighted the identification of 1226 root membrane protein candidates whose cellular and functional classifications predispose plastids and protein synthesis as prevalent organelle and function, respectively. Changes at the protein abundance level between the membrane proteomes of mycorrhizal and nonmycorrhizal roots were further monitored by spectral counting, which retrieved a total of 96 proteins that displayed a differential accumulation upon AM symbiosis. Besides the canonical markers of the periarbuscular membrane, new candidates supporting the importance of membrane trafficking events during mycorrhiza establishment/functioning were identified, including flotillin-like proteins. The data have been deposited to the ProteomeXchange with identifier PXD000875. BIOLOGICAL SIGNIFICANCE During arbuscular mycorrhizal symbiosis, one of the most widespread mutualistic associations in nature, the endomembrane system of plant roots is believed to undergo qualitative and quantitative changes in order to sustain both the accommodation process of the AM fungus within cortical cells and the exchange of nutrients between symbionts. Large-scale GeLC-MS/MS proteomic analysis of the membrane fractions from mycorrhizal and nonmycorrhizal roots of M. truncatula coupled to spectral counting retrieved around one hundred proteins that displayed changes in abundance upon mycorrhizal establishment. The symbiosis-related membrane proteins that were identified mostly function in signaling/membrane trafficking and nutrient uptake regulation. Besides extending the coverage of the root membrane proteome of M. truncatula, new candidates involved in the symbiotic program emerged from the current study, which pointed out a dynamic reorganization of microsomal proteins during the accommodation of AM fungi within cortical cells.
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Affiliation(s)
- Cosette Abdallah
- UMR Agroécologie INRA 1347/Agrosup/Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065 Dijon Cedex, France; Environmental and Agro-Biotechnologies Department, Centre de Recherche Public-Gabriel Lippmann, 41, rue du Brill, Belvaux L-4422, Luxembourg.
| | - Benoit Valot
- UMR de Génétique Végétale, PAPPSO, Ferme du Moulon, 91190 Gif sur Yvette, France.
| | - Christelle Guillier
- UMR Agroécologie INRA 1347/Agrosup/Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065 Dijon Cedex, France.
| | - Arnaud Mounier
- UMR Agroécologie INRA 1347/Agrosup/Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065 Dijon Cedex, France.
| | - Thierry Balliau
- UMR de Génétique Végétale, PAPPSO, Ferme du Moulon, 91190 Gif sur Yvette, France.
| | - Michel Zivy
- UMR de Génétique Végétale, PAPPSO, Ferme du Moulon, 91190 Gif sur Yvette, France.
| | - Diederik van Tuinen
- UMR Agroécologie INRA 1347/Agrosup/Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065 Dijon Cedex, France.
| | - Jenny Renaut
- Environmental and Agro-Biotechnologies Department, Centre de Recherche Public-Gabriel Lippmann, 41, rue du Brill, Belvaux L-4422, Luxembourg.
| | - Daniel Wipf
- UMR Agroécologie INRA 1347/Agrosup/Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065 Dijon Cedex, France.
| | - Eliane Dumas-Gaudot
- UMR Agroécologie INRA 1347/Agrosup/Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065 Dijon Cedex, France.
| | - Ghislaine Recorbet
- Environmental and Agro-Biotechnologies Department, Centre de Recherche Public-Gabriel Lippmann, 41, rue du Brill, Belvaux L-4422, Luxembourg.
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81
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Rich MK, Schorderet M, Reinhardt D. The role of the cell wall compartment in mutualistic symbioses of plants. FRONTIERS IN PLANT SCIENCE 2014; 5:238. [PMID: 24917869 PMCID: PMC4041022 DOI: 10.3389/fpls.2014.00238] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2014] [Accepted: 05/12/2014] [Indexed: 05/18/2023]
Abstract
Plants engage in mutualistic interactions with microbes that improve their mineral nutrient supply. The most wide-spread symbiotic association is arbuscular mycorrhiza (AM), in which fungi of the order Glomeromycota invade roots and colonize the cellular lumen of cortical cells. The establishment of this interaction requires a dedicated molecular-genetic program and a cellular machinery of the plant host. This program is partially shared with the root nodule symbiosis (RNS), which involves prokaryotic partners collectively referred to as rhizobia. Both, AM and RNS are endosymbioses that involve intracellular accommodation of the microbial partner in the cells of the plant host. Since plant cells are surrounded by sturdy cell walls, root penetration and cell invasion requires mechanisms to overcome this barrier while maintaining the cytoplasm of the two partners separate during development of the symbiotic association. Here, we discuss the diverse functions of the cell wall compartment in establishment and functioning of plant symbioses with the emphasis on AM and RNS, and we describe the stages of the AM association between the model organisms Petunia hybrida and Rhizophagus irregularis.
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Affiliation(s)
| | | | - Didier Reinhardt
- Department of Biology, University of FribourgFribourg, Switzerland
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82
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Wang E, Yu N, Bano SA, Liu C, Miller AJ, Cousins D, Zhang X, Ratet P, Tadege M, Mysore KS, Downie JA, Murray JD, Oldroyd GED, Schultze M. A H+-ATPase That Energizes Nutrient Uptake during Mycorrhizal Symbioses in Rice and Medicago truncatula. THE PLANT CELL 2014; 26:1818-1830. [PMID: 24781115 PMCID: PMC4036588 DOI: 10.1105/tpc.113.120527] [Citation(s) in RCA: 94] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2013] [Revised: 03/25/2014] [Accepted: 04/09/2014] [Indexed: 05/18/2023]
Abstract
Most plant species form symbioses with arbuscular mycorrhizal (AM) fungi, which facilitate the uptake of mineral nutrients such as phosphate from the soil. Several transporters, particularly proton-coupled phosphate transporters, have been identified on both the plant and fungal membranes and contribute to delivering phosphate from fungi to plants. The mechanism of nutrient exchange has been studied in plants during mycorrhizal colonization, but the source of the electrochemical proton gradient that drives nutrient exchange is not known. Here, we show that plasma membrane H+-ATPases that are specifically induced in arbuscule-containing cells are required for enhanced proton pumping activity in membrane vesicles from AM-colonized roots of rice (Oryza sativa) and Medicago truncatula. Mutation of the H+-ATPases reduced arbuscule size and impaired nutrient uptake by the host plant through the mycorrhizal symbiosis. Overexpression of the H+-ATPase Os-HA1 increased both phosphate uptake and the plasma membrane potential, suggesting that this H+-ATPase plays a key role in energizing the periarbuscular membrane, thereby facilitating nutrient exchange in arbusculated plant cells.
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Affiliation(s)
- Ertao Wang
- National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - Nan Yu
- National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China John Innes Centre, Norwich NR4 7UH, United Kingdom
| | - S Asma Bano
- Department of Biology, University of York, York YO10 5DD, United Kingdom
| | - Chengwu Liu
- John Innes Centre, Norwich NR4 7UH, United Kingdom
| | | | | | - Xiaowei Zhang
- National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Pascal Ratet
- Institut des Sciences du Végétale, Centre National de la Recherche Scientifique, 91198 Gif-sur-Yvette, France
| | - Million Tadege
- Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401
| | - Kirankumar S Mysore
- Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401
| | | | | | | | - Michael Schultze
- Department of Biology, University of York, York YO10 5DD, United Kingdom
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83
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Krajinski F, Courty PE, Sieh D, Franken P, Zhang H, Bucher M, Gerlach N, Kryvoruchko I, Zoeller D, Udvardi M, Hause B. The H+-ATPase HA1 of Medicago truncatula Is Essential for Phosphate Transport and Plant Growth during Arbuscular Mycorrhizal Symbiosis. THE PLANT CELL 2014; 26:1808-1817. [PMID: 24781114 PMCID: PMC4036587 DOI: 10.1105/tpc.113.120436] [Citation(s) in RCA: 80] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2013] [Revised: 03/27/2014] [Accepted: 04/09/2014] [Indexed: 05/18/2023]
Abstract
A key feature of arbuscular mycorrhizal symbiosis is improved phosphorus nutrition of the host plant via the mycorrhizal pathway, i.e., the fungal uptake of Pi from the soil and its release from arbuscules within root cells. Efficient transport of Pi from the fungus to plant cells is thought to require a proton gradient across the periarbuscular membrane (PAM) that separates fungal arbuscules from the host cell cytoplasm. Previous studies showed that the H+-ATPase gene HA1 is expressed specifically in arbuscule-containing root cells of Medicago truncatula. We isolated a ha1-2 mutant of M. truncatula and found it to be impaired in the development of arbuscules but not in root colonization by Rhizophagus irregularis hyphae. Artificial microRNA silencing of HA1 recapitulated this phenotype, resulting in small and truncated arbuscules. Unlike the wild type, the ha1-2 mutant failed to show a positive growth response to mycorrhizal colonization under Pi-limiting conditions. Uptake experiments confirmed that ha1-2 mutants are unable to take up phosphate via the mycorrhizal pathway. Increased pH in the apoplast of abnormal arbuscule-containing cells of the ha1-2 mutant compared with the wild type suggests that HA1 is crucial for building a proton gradient across the PAM and therefore is indispensible for the transfer of Pi from the fungus to the plant.
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Affiliation(s)
- Franziska Krajinski
- Max Planck Institute of Molecular Plant Physiology, D-14476 Potsdam (OT) Golm, Germany
| | | | - Daniela Sieh
- Max Planck Institute of Molecular Plant Physiology, D-14476 Potsdam (OT) Golm, Germany
| | - Philipp Franken
- Leibniz-Institute of Vegetable and Ornamental Crops, D-14979 Großbeeren, Germany
| | - Haoqiang Zhang
- Leibniz-Institute of Vegetable and Ornamental Crops, D-14979 Großbeeren, Germany
| | - Marcel Bucher
- Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, D-50674 Cologne, Germany
| | - Nina Gerlach
- Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, D-50674 Cologne, Germany
| | | | - Daniela Zoeller
- Max Planck Institute of Molecular Plant Physiology, D-14476 Potsdam (OT) Golm, Germany
| | - Michael Udvardi
- The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401
| | - Bettina Hause
- Leibniz Institute of Plant Biochemistry, D-06120 Halle, Germany
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84
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Kojima T, Saito K, Oba H, Yoshida Y, Terasawa J, Umehara Y, Suganuma N, Kawaguchi M, Ohtomo R. Isolation and Phenotypic Characterization of Lotus japonicus Mutants Specifically Defective in Arbuscular Mycorrhizal Formation. ACTA ACUST UNITED AC 2014; 55:928-41. [DOI: 10.1093/pcp/pcu024] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
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85
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ABCG Transporters and Their Role in the Biotic Stress Response. SIGNALING AND COMMUNICATION IN PLANTS 2014. [DOI: 10.1007/978-3-319-06511-3_8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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86
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Abstract
The default mineral nutrient acquisition strategy of land plants is the symbiosis with arbuscular mycorrhiza (AM) fungi. Research into the cell and developmental biology of AM revealed fascinating insights into the plasticity of plant cell development and of interorganismic communication. It is driven by the prospect of increased exploitation of AM benefits for sustainable agriculture. The plant cell developmental program for intracellular accommodation of AM fungi is activated by a genetically defined signaling pathway involving calcium spiking in the nucleus as second messenger. Calcium spiking is triggered by chitooligosaccharides released by AM fungi that are probably perceived via LysM domain receptor kinases. Fungal infection and calcium spiking are spatiotemporally coordinated, and only cells committed to accommodating the fungus undergo high-frequency spiking. Delivery of mineral nutrients by AM fungi occurs at tree-shaped hyphal structures, the arbuscules, in plant cortical cells. Nutrients are taken up at a plant-derived periarbuscular membrane, which surrounds fungal hyphae and carries a specific transporter composition that is of direct importance for symbiotic efficiency. An elegant study has unveiled a new and unexpected mechanism for specific protein localization to the periarbuscular membrane, which relies on the timing of gene expression to synchronize protein biosynthesis with a redirection of secretion. The control of AM development by phytohormones is currently subject to active investigation and has led to the rediscovery of strigolactones. Nearly all tested phytohormones regulate AM development, and major insights into the mechanisms of this regulation are expected in the near future.
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Affiliation(s)
- Caroline Gutjahr
- Institute of Genetics, Faculty of Biology, University of Munich, 82152 Martinsried, Germany; ,
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87
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Recorbet G, Abdallah C, Renaut J, Wipf D, Dumas-Gaudot E. Protein actors sustaining arbuscular mycorrhizal symbiosis: underground artists break the silence. THE NEW PHYTOLOGIST 2013; 199:26-40. [PMID: 23638913 DOI: 10.1111/nph.12287] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2013] [Accepted: 03/14/2013] [Indexed: 05/24/2023]
Abstract
The roots of most land plants can enter a relationship with soil-borne fungi belonging to the phylum Glomeromycota. This symbiosis with arbuscular mycorrhizal (AM) fungi belongs to the so-called biotrophic interactions, involving the intracellular accommodation of a microorganism by a living plant cell without causing the death of the host. Although profiling technologies have generated an increasing depository of plant and fungal proteins eligible for sustaining AM accommodation and functioning, a bottleneck exists for their functional analysis as these experiments are difficult to carry out with mycorrhiza. Nonetheless, the expansion of gene-to-phenotype reverse genetic tools, including RNA interference and transposon silencing, have recently succeeded in elucidating some of the plant-related protein candidates. Likewise, despite the ongoing absence of transformation tools for AM fungi, host-induced gene silencing has allowed knockdown of fungal gene expression in planta for the first time, thus unlocking a technological limitation in deciphering the functional pertinence of glomeromycotan proteins during mycorrhizal establishment. This review is thus intended to draw a picture of our current knowledge about the plant and fungal protein actors that have been demonstrated to be functionally implicated in sustaining AM symbiosis mostly on the basis of silencing approaches.
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Affiliation(s)
- Ghislaine Recorbet
- UMR Agroécologie INRA 1347/Agrosup, Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065, Dijon Cedex, France
| | - Cosette Abdallah
- UMR Agroécologie INRA 1347/Agrosup, Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065, Dijon Cedex, France
- Environmental and Agro-Biotechnologies Department, Centre de Recherche Public- Gabriel Lippmann, 41, rue du Brill, Belvaux, L-4422, Luxembourg
| | - Jenny Renaut
- Environmental and Agro-Biotechnologies Department, Centre de Recherche Public- Gabriel Lippmann, 41, rue du Brill, Belvaux, L-4422, Luxembourg
| | - Daniel Wipf
- UMR Agroécologie INRA 1347/Agrosup, Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065, Dijon Cedex, France
| | - Eliane Dumas-Gaudot
- UMR Agroécologie INRA 1347/Agrosup, Université de Bourgogne, Pôle Interactions Plantes Microorganismes ERL 6300 CNRS, BP 86510, 21065, Dijon Cedex, France
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88
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Groth M, Kosuta S, Gutjahr C, Haage K, Hardel SL, Schaub M, Brachmann A, Sato S, Tabata S, Findlay K, Wang TL, Parniske M. Two Lotus japonicus symbiosis mutants impaired at distinct steps of arbuscule development. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2013; 75:117-129. [PMID: 23627596 DOI: 10.1111/tpj.12220] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2012] [Revised: 04/03/2013] [Accepted: 04/09/2013] [Indexed: 05/14/2023]
Abstract
Arbuscular mycorrhiza (AM) fungi form nutrient-acquiring symbioses with the majority of higher plants. Nutrient exchange occurs via arbuscules, highly branched hyphal structures that are formed within root cortical cells. With a view to identifying host genes involved in AM development, we isolated Lotus japonicus AM-defective mutants via a microscopic screen of an ethyl methanesulfonate-mutagenized population. A standardized mapping procedure was developed that facilitated positioning of the defective loci on the genetic map of L. japonicus, and, in five cases, allowed identification of mutants of known symbiotic genes. Two additional mutants representing independent loci did not form mature arbuscules during symbiosis with two divergent AM fungal species, but exhibited signs of premature arbuscule arrest or senescence. Marker gene expression patterns indicated that the two mutants are affected in distinct steps of arbuscule development. Both mutants formed wild-type-like root nodules upon inoculation with Mesorhizobium loti, indicating that the mutated loci are essential during AM but not during root nodule symbiosis.
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Affiliation(s)
- Martin Groth
- Faculty of Biology, Genetics, University of Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
| | - Sonja Kosuta
- The Sainsbury Laboratory, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK
| | - Caroline Gutjahr
- Faculty of Biology, Genetics, University of Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
| | - Kristina Haage
- Faculty of Biology, Genetics, University of Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
| | - Simone Liesel Hardel
- Faculty of Biology, Genetics, University of Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
| | - Miriam Schaub
- Faculty of Biology, Genetics, University of Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
| | - Andreas Brachmann
- Faculty of Biology, Genetics, University of Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
| | - Shusei Sato
- Kazusa DNA Research Institute, 2-6-7 Kazusa-Kamatari, Kisarazu, Chiba, 292-0818, Japan
| | - Satoshi Tabata
- Kazusa DNA Research Institute, 2-6-7 Kazusa-Kamatari, Kisarazu, Chiba, 292-0818, Japan
| | - Kim Findlay
- John Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK
| | - Trevor L Wang
- John Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK
| | - Martin Parniske
- Faculty of Biology, Genetics, University of Munich, Großhaderner Straße 2-4, 82152, Martinsried, Germany
- The Sainsbury Laboratory, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK
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89
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Marzec M, Muszynska A, Gruszka D. The role of strigolactones in nutrient-stress responses in plants. Int J Mol Sci 2013; 14:9286-304. [PMID: 23629665 PMCID: PMC3676783 DOI: 10.3390/ijms14059286] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2013] [Revised: 04/03/2013] [Accepted: 04/17/2013] [Indexed: 01/09/2023] Open
Abstract
Strigolactones (SLs) are a new group of plant hormones, which have been intensively investigated during the last few years. The wide spectrum of SLs actions, including the regulation of shoot/root architecture, and the stimulation of the interactions between roots and fungi or bacteria, as well as the stimulation of germination of parasitic plants, indicates that this group of hormones may play an important role in the mechanisms that control soil exploration, and the root-mediated uptake of nutrients. Current studies have shown that SLs might be factors that have an influence on the plant response to a deficiency of macronutrients. Experimental data from the last four years have confirmed that the biosynthesis and exudation of SLs are increased under phosphorus and nitrogen deficiency. All these data suggest that SLs may regulate the complex response to nutrient stress, which include not only the modification of the plant developmental process, but also the cooperation with other organisms in order to minimize the effects of threats. In this paper the results of studies that indicate that SLs play an important role in the response to nutrient stress are reviewed and the consequences of the higher biosynthesis and exudation of SLs in response to phosphorus and nitrogen deficiency are discussed.
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Affiliation(s)
- Marek Marzec
- Department of Genetics, Faculty of Biology and Environmental Protection, University of Silesia, Katowice 40-032, Poland; E-Mail:
- Author to whom correspondence should be addressed; E-Mail: ; Tel.: +48-32-2009-482; Fax: +48-32-2009-361
| | - Aleksandra Muszynska
- Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben 06466, Germany; E-Mail:
| | - Damian Gruszka
- Department of Genetics, Faculty of Biology and Environmental Protection, University of Silesia, Katowice 40-032, Poland; E-Mail:
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90
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Yoshida S, Kameoka H, Tempo M, Akiyama K, Umehara M, Yamaguchi S, Hayashi H, Kyozuka J, Shirasu K. The D3 F-box protein is a key component in host strigolactone responses essential for arbuscular mycorrhizal symbiosis. THE NEW PHYTOLOGIST 2012; 196:1208-1216. [PMID: 23025475 DOI: 10.1111/j.1469-8137.2012.04339.x] [Citation(s) in RCA: 83] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2012] [Accepted: 08/10/2012] [Indexed: 05/23/2023]
Abstract
Arbuscular mycorrhiza (AM) represents an ancient endosymbiosis between plant roots and Glomeromycota fungi. Strigolactones (SLs), plant-derived terpenoid lactones, activate hyphal branching of AM fungi before physical contact. Lack of SL biosynthesis results in lower colonization of AM fungi. The F-box protein, DWARF3 (D3), and the hydrolase family protein DWARF14 (D14) are crucial for SL responses in rice. Here we conducted AM fungal colonization assays with the SL-insensitive d3 and d14 mutants. The d3 mutant exhibited strong defects in AM fungal colonization, whereas the d14 mutant showed higher AM fungal colonization. As D14 has a homologous protein, D14-LIKE, we generated D14-LIKE knockdown lines by RNA interference in the wildtype and d14 background. D14 and D14-LIKE double knockdown lines exhibited similar colonization rates as those of the d14-1 mutant. D3 is crucial for establishing AM symbiosis in rice, whereas D14 and D14-LIKE are not. Our results suggest distinct roles for these SL-related components in AM symbiosis.
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Affiliation(s)
- Satoko Yoshida
- Plant Science Center, RIKEN, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, Kanagawa, 230-0045, Japan
| | - Hiromu Kameoka
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan
| | - Misaki Tempo
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Nakaku, Sakai, Osaka, 599-8531, Japan
| | - Kohki Akiyama
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Nakaku, Sakai, Osaka, 599-8531, Japan
| | - Mikihisa Umehara
- Plant Science Center, RIKEN, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, Kanagawa, 230-0045, Japan
- Graduate School of Life Sciences, Toyo University, 1-1-1 Izumino, Itakura-machi, Ora-gun, Gunma, 374-0193, Japan
| | - Shinjiro Yamaguchi
- Plant Science Center, RIKEN, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, Kanagawa, 230-0045, Japan
- Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi, 980-8577, Japan
| | - Hideo Hayashi
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Nakaku, Sakai, Osaka, 599-8531, Japan
| | - Junko Kyozuka
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan
| | - Ken Shirasu
- Plant Science Center, RIKEN, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, Kanagawa, 230-0045, Japan
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91
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Harrison MJ. Cellular programs for arbuscular mycorrhizal symbiosis. CURRENT OPINION IN PLANT BIOLOGY 2012; 15:691-8. [PMID: 23036821 DOI: 10.1016/j.pbi.2012.08.010] [Citation(s) in RCA: 79] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2012] [Revised: 08/08/2012] [Accepted: 08/12/2012] [Indexed: 05/03/2023]
Abstract
In arbuscular mycorrhizal (AM) symbiosis, AM fungi colonize root cortical cells to obtain carbon from the plant, while assisting the plant with the acquisition of mineral nutrients from the soil. Within the root cells, the fungal hyphae inhabit membrane-bound compartments that the plant establishes to accommodate the fungal symbiont. Recent data provide new insights into the events associated with development of the symbiosis including signaling for the formation of a cellular apparatus that guides hyphal growth through the cell. Plant genes that play key roles in a cellular program for the accommodation of microbial symbionts have been identified. In the inner cortical cells, tightly regulated changes in gene expression accompanied by a transient reorientation of secretion, enables the cell to build and populate the periarbuscular membrane with its unique complement of transporter proteins. Similarities between the cellular events for development of the periarbuscular membrane and cell plate formation are emerging.
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Affiliation(s)
- Maria J Harrison
- Boyce Thompson Institute for Plant Research, Ithaca, NY 14853, USA.
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92
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Lauressergues D, Delaux PM, Formey D, Lelandais-Brière C, Fort S, Cottaz S, Bécard G, Niebel A, Roux C, Combier JP. The microRNA miR171h modulates arbuscular mycorrhizal colonization of Medicago truncatula by targeting NSP2. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012; 72:512-22. [PMID: 22775306 DOI: 10.1111/j.1365-313x.2012.05099.x] [Citation(s) in RCA: 100] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Most land plants live symbiotically with arbuscular mycorrhizal fungi. Establishment of this symbiosis requires signals produced by both partners: strigolactones in root exudates stimulate pre-symbiotic growth of the fungus, which releases lipochito-oligosaccharides (Myc-LCOs) that prepare the plant for symbiosis. Here, we have investigated the events downstream of this early signaling in the roots. We report that expression of miR171h, a microRNA that targets NSP2, is up-regulated in the elongation zone of the root during colonization by Rhizophagus irregularis (formerly Glomus intraradices) and in response to Myc-LCOs. Fungal colonization was much reduced by over-expressing miR171h in roots, mimicking the phenotype of nsp2 mutants. Conversely, in plants expressing an NSP2 mRNA resistant to miR171h cleavage, fungal colonization was much increased and extended into the elongation zone of the roots. Finally, phylogenetic analyses revealed that miR171h regulation of NSP2 is probably conserved among mycotrophic plants. Our findings suggest a regulatory mechanism, triggered by Myc-LCOs, that prevents over-colonization of roots by arbuscular mycorrhizal fungi by a mechanism involving miRNA-mediated negative regulation of NSP2.
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Affiliation(s)
- Dominique Lauressergues
- Université de Toulouse, UMR 5546, Laboratoire de Recherche en Sciences Végétales, 31326 Castanet-Tolosan Cedex, France
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93
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Bapaume L, Reinhardt D. How membranes shape plant symbioses: signaling and transport in nodulation and arbuscular mycorrhiza. FRONTIERS IN PLANT SCIENCE 2012; 3:223. [PMID: 23060892 PMCID: PMC3464683 DOI: 10.3389/fpls.2012.00223] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2012] [Accepted: 09/14/2012] [Indexed: 05/19/2023]
Abstract
As sessile organisms that cannot evade adverse environmental conditions, plants have evolved various adaptive strategies to cope with environmental stresses. One of the most successful adaptations is the formation of symbiotic associations with beneficial microbes. In these mutualistic interactions the partners exchange essential nutrients and improve their resistance to biotic and abiotic stresses. In arbuscular mycorrhiza (AM) and in root nodule symbiosis (RNS), AM fungi and rhizobia, respectively, penetrate roots and accommodate within the cells of the plant host. In these endosymbiotic associations, both partners keep their plasma membranes intact and use them to control the bidirectional exchange of signaling molecules and nutrients. Intracellular accommodation requires the exchange of symbiotic signals and the reprogramming of both interacting partners. This involves fundamental changes at the level of gene expression and of the cytoskeleton, as well as of organelles such as plastids, endoplasmic reticulum (ER), and the central vacuole. Symbiotic cells are highly compartmentalized and have a complex membrane system specialized for the diverse functions in molecular communication and nutrient exchange. Here, we discuss the roles of the different cellular membrane systems and their symbiosis-related proteins in AM and RNS, and we review recent progress in the analysis of membrane proteins involved in endosymbiosis.
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Affiliation(s)
| | - Didier Reinhardt
- Department of Biology, University of FribourgFribourg, Switzerland
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94
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Hong JJ, Park YS, Bravo A, Bhattarai KK, Daniels DA, Harrison MJ. Diversity of morphology and function in arbuscular mycorrhizal symbioses in Brachypodium distachyon. PLANTA 2012; 236:851-865. [PMID: 22711284 DOI: 10.1007/s00425-012-1677-z] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2012] [Accepted: 05/25/2012] [Indexed: 05/28/2023]
Abstract
Brachypodium distachyon is a grass species that serves as a useful model for wheat and also for many of the grass species proposed as feedstocks for bioenergy production. Here, we monitored B. distachyon symbioses with five different arbuscular mycorrhizal (AM) fungi and identified symbioses that vary functionally with respect to plant performance. Three symbioses promoted significant increases in shoot phosphorus (P) content and shoot growth of Brachypodium, while two associations were neutral. The Brachypodium/Glomus candidum symbiosis showed a classic 'Paris-type' morphology. In the other four AM symbioses, hyphal growth was exclusively intracellular and linear; hyphal coils were not observed and arbuscules were abundant. Expression of the Brachypodium ortholog of the symbiosis-specific phosphate (Pi) transporter MtPT4 did not differ significantly in these five interactions indicating that the lack of apparent functionality did not result from a failure to express this gene or several other AM symbiosis-associated genes. Analysis of the expression patterns of the complete PHT1 Pi transporter gene family and AMT2 gene family in B. distachyon/G. intraradices mycorrhizal roots identified additional family members induced during symbiosis and again, transcript levels were similar in the different Brachypodium AM symbioses. This initial morphological, molecular and functional characterization provides a framework for future studies of functional diversity in AM symbiosis in B. distachyon.
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Affiliation(s)
- Jeon J Hong
- Boyce Thompson Institute for Plant Research, Tower Road, Ithaca, NY 14853, USA
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95
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Singh S, Parniske M. Activation of calcium- and calmodulin-dependent protein kinase (CCaMK), the central regulator of plant root endosymbiosis. CURRENT OPINION IN PLANT BIOLOGY 2012; 15:444-53. [PMID: 22727503 DOI: 10.1016/j.pbi.2012.04.002] [Citation(s) in RCA: 88] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2012] [Accepted: 04/26/2012] [Indexed: 05/19/2023]
Abstract
The key molecular event during the development of arbuscular mycorrhiza and the root nodule symbiosis is the activation of calcium- and calmodulin-dependent protein kinase (CCaMK). Its regulation is complex and involves positive as well as negative regulation facilitated by autophosphorylation of two conserved sites. Deregulated versions of CCaMK are sufficient for mediating both organogenesis and infection processes. Epistasis tests demonstrated that a main function of signaling components upstream of calcium spiking is the activation of CCaMK. Despite CCaMK being a central signaling hub, specificity for both symbioses exists, resulting in differential transcriptional gene expression patterns. While the specificity upstream of CCaMK can be conceptualized by the specific perception of rhizobial and fungal lipo-chitooligosaccharides via cognate LysM receptors, the mechanisms conferring transcriptional specificity downstream of CCaMK are likely conferred by a variety of transcriptional regulators, mediating symbiosis appropriate gene regulation.
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Affiliation(s)
- Sylvia Singh
- Genetics, University of Munich, 82152 Martinsried, Germany
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