51
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Aguiar-Santos J, deHart P, Forsberg B, Freitas C. Impacts of river fragmentation on limiting individual dietary specialization of Amazonian predatory fish. PeerJ 2022; 10:e14266. [PMID: 36540793 PMCID: PMC9760019 DOI: 10.7717/peerj.14266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 09/27/2022] [Indexed: 12/23/2022] Open
Abstract
Individual dietary specialization is one of the factors that promotes variation in resource use at the individual level. Here we used stable isotope analysis of multiple tissues with different turnover rates to examine the degree of individual specialization in two sub-populations of the predator Cichla temensis inhabiting both fragmented and undammed rivers within the Uatumã River basin of the Amazon. Our results showed that the undammed river provides better conditions to promote individual dietary specialization than the fragmented river. This study contributes to the understanding of how specific life history characteristics of populations of generalist predators are impacted by fragmentation within megadiverse environments such as the Amazon basin.
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Affiliation(s)
- Jamerson Aguiar-Santos
- Graduate Program in Ecology, National Institute of Amazonian Research, Manaus, Amazonas, Brazil
| | - Pieter deHart
- Office of Graduate Studies, University of Wisconsin-Green Bay, Green Bay, WI, United States of America
| | - Bruce Forsberg
- Department of Environmental Conservation, Vermont Agency of Natural Resources, Montpelier, VT, United States of America
| | - Carlos Freitas
- Department of Fishery Sciences, Federal University of Amazonas, Manaus, Amazonas, Brazil
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52
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Caldas B, Thieme ML, Shahbol N, Coelho ME, Grill G, Van Damme PA, Aranha R, Cañas C, Fagundes CK, Franco‐León N, Herrera‐Collazos EE, Jézéquel C, Montoya M, Mosquera‐Guerra F, Oliveira‐da‐Costa M, Paschoalini M, Petry P, Oberdorff T, Trujillo F, Tedesco PA, de Brito Ribeiro MCL. Identifying the current and future status of freshwater connectivity corridors in the Amazon Basin. CONSERVATION SCIENCE AND PRACTICE 2022. [DOI: 10.1111/csp2.12853] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Affiliation(s)
| | | | | | | | | | | | | | - Carlos Cañas
- Bureau of Water Resource Information St. Johns River Water Management District Palatka Florida USA
| | - Camila K. Fagundes
- Wildlife Conservation Society (former) Brasilia Brazil
- Universidade Federal do Pampa (current) Uruguaiana, Rio Grande do Sul Brazil
| | | | | | - Céline Jézéquel
- Evolution et diversite biologique, UMR EDB, CNRS 5174, IRD253, UPS Toulouse France
| | | | | | | | - Mariana Paschoalini
- Aqualie Institute and Laboratory of Ecological Behavior and Bioacoutics of the Federal University of Juiz de Fora Juiz de Fora Minas Gerais Brazil
| | - Paulo Petry
- The Nature Conservancy, Latin America Freshwater Unit Hollis New Hampshire USA
| | - Thierry Oberdorff
- Evolution et diversite biologique, UMR EDB, CNRS 5174, IRD253, UPS Toulouse France
| | | | - Pablo A. Tedesco
- Evolution et diversite biologique, UMR EDB, CNRS 5174, IRD253, UPS Toulouse France
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53
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Scholz T, Kuchta R. Fish tapeworms (Cestoda) in the molecular era: achievements, gaps and prospects. Parasitology 2022; 149:1876-1893. [PMID: 36004800 PMCID: PMC11010522 DOI: 10.1017/s0031182022001202] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Revised: 08/11/2022] [Accepted: 08/15/2022] [Indexed: 12/29/2022]
Abstract
The tapeworms of fishes (Chondrichthyes and Actinopterygii) account one-third (1670 from around 5000) of the total tapeworm (Platyhelminthes: Cestoda) species diversity. In total 1186 species from 9 orders occur as adults in elasmobranchs (sharks, rays and chimaeras), and 484 species from 8 orders mature in ray-finned fishes (referred to here as teleosts). Teleost tapeworms are dominated by freshwater species (78%), but only 3% of elasmobranch tapeworms are known from freshwater rays of South America and Asia (Borneo). In the last 2 decades, vast progress has been made in understanding species diversity, host associations and interrelationships among fish tapeworms. In total, 172 new species have been described since 2017 (149 from elasmobranchs and 23 from teleosts; invalidly described taxa are not included, especially those from the Oriental region). Molecular data, however, largely limited to a few molecular markers (mainly 28S rDNA, but also 18S and cox1), are available for about 40% of fish tapeworm species. They allowed us to significantly improve our understanding of their interrelationships, including proposals of a new, more natural classification at the higher-taxonomy level (orders and families) as well as at the lower-taxonomy level (genera). In this review, we summarize the main advances and provide perspectives for future research.
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Affiliation(s)
- Tomáš Scholz
- Institute of Parasitology, Biology Centre, Czech Academy of Sciences, Branišovská 31, 370 05 České Budějovice, Czech Republic
| | - Roman Kuchta
- Institute of Parasitology, Biology Centre, Czech Academy of Sciences, Branišovská 31, 370 05 České Budějovice, Czech Republic
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54
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Rocha CMC, Sampaio CLS. A review of the knowledge of reef fish in the Southwest Atlantic. MARINE ENVIRONMENTAL RESEARCH 2022; 182:105769. [PMID: 36272222 DOI: 10.1016/j.marenvres.2022.105769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 09/30/2022] [Accepted: 10/03/2022] [Indexed: 06/16/2023]
Abstract
Reef environments are rapidly transforming worldwide, and these changes are causing major impacts to the reef ecosystem. Scientific knowledge is strategic for marine conservation and management in these scenarios. Aiming to contribute to this subject, a systematic review from 1967 to 2020 was conducted, in order to identify gaps in studies regarding reef fish species, ecosystem components and processes. Multidisciplinary sciences concerning reef fish have been rising, mainly in the fields of basic biology and ecology. Besides that, phase shifts and ecosystem services were absent terms in the analyzes of co-occurrence. Research in the ethnosciences needs to be increased, and will improve access to local ecological knowledge, which can be used as a tool to address issues in reef environments. Socio-ecological systems are components of this landscape that has had few publications. The participation in the elaboration of public policies can be a new avenue to foster the biodiversity of reef environments.
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Affiliation(s)
- Cacilda M C Rocha
- Programa de Pós-Graduação em Diversidade Biológica e Conservação nos Trópicos, Instituto de Biologia e Ciências da Saúde, Universidade Federal de Alagoas. Av. Lourival Melo Mota - Tabuleiro do Martins, Maceió, 57072-900, AL, Brazil; Laboratório de Ictiologia e Conservação, Universidade Federal de Alagoas. Av. Beira Rio, Centro Histórico, Penedo, 57200-000, AL, Brazil.
| | - Cláudio L S Sampaio
- Programa de Pós-Graduação em Diversidade Biológica e Conservação nos Trópicos, Instituto de Biologia e Ciências da Saúde, Universidade Federal de Alagoas. Av. Lourival Melo Mota - Tabuleiro do Martins, Maceió, 57072-900, AL, Brazil; Laboratório de Ictiologia e Conservação, Universidade Federal de Alagoas. Av. Beira Rio, Centro Histórico, Penedo, 57200-000, AL, Brazil.
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55
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Chuctaya J, Meza-Vargas V, Faustino-Fuster DR, Hidalgo M, Ortega H. Lista de especies de peces de la cuenca del Río Ucayali, Perú. REVISTA PERUANA DE BIOLOGÍA 2022. [DOI: 10.15381/rpb.v29i4.20049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
En este trabajo se presenta una lista actualizada de los registros de especies de peces de la cuenca del río Ucayali, Perú, provenientes de datos publicados y no publicados. Los resultados muestran que la cuenca del Ucayali presenta una ictiofauna rica y diversificada con el registro de 734 especies distribuidas en 15 órdenes, 49 familias y 292 géneros. La Ictiofauna está compuesta por peces miniatura (4%), peces pequeños (39%), medianos (41%), grandes (13%) y gigantes (3%). Los grupos dominantes son los Characiformes (312 especies, 43.0 %), Siluriformes (270 especies, 36.8%), Gymnotiformes (51 especies, 6.9%), y Cichliformes (50 especies, 6.8%). Parte de la ictiofauna es compartida con cuencas adyacentes como Marañón, y Amazonas peruano, principalmente en la región de confluencia, lo que contribuye a la notable diversidad de peces en la cuenca. Se observó una alta riqueza de especies con distribución restricta de los géneros Orestias, Astroblepus, Trichomycterus, Hemibrycon, entre otras especies, que ocurren en la región de cabeceras. Estimativos de riqueza de especies considerando su distribución por cada 100 m de altitud, indican que la cuenca del Ucayali esta subestimada, esperándose encontrar hasta 1125 especies. Los resultados aquí presentados son antecedentes que coadyuvaran a la toma de decisiones con fines de conservación y desarrollo sustentable en la región amazónica.
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56
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Pantoja C, Telles B, Paschoal F, Luque JL, Kudlai O. Digenean trematodes infecting the frigate tuna Auxis thazard (Scombriformes, Scombridae) off the Rio de Janeiro coast, Brazil, including molecular data. Parasite 2022; 29:44. [PMID: 36205525 PMCID: PMC9541523 DOI: 10.1051/parasite/2022044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Accepted: 09/07/2022] [Indexed: 11/06/2022] Open
Abstract
Although some parasitological efforts have focused on the frigate tuna Auxis thazard (Lacepède) (Scombriformes, Scombridae) in Brazil, its digenean fauna remains poorly known. Combining morphological and molecular methods, we investigated the diversity of digenean trematodes of A. thazard collected from the coastal waters off the state of Rio de Janeiro, Brazil in 2021. Six species belonging to four families were recorded: the bucephalid Rhipidocotyle cf. angusticolle Chandler, 1941, the didymozoid Didymocystis sp. 6 sensu Louvard et al. (2022), the fellodistomid Tergestia sp., and three hemiurids, Dinurus euthynni Yamaguti, 1934, Lecithochirium floridense (Manter, 1934), and L. synodi Manter, 1931. The current study brings the total number of digenean trematode species parasitising A. thazard in Brazil up to eight, with hemiuroid trematodes being most diverse. Auxis thazard is a new host record for L. floridense, L. synodi and potentially for R. angusticolle. The geographic distribution of several species found in our study appeared to be wider than previously known. Our study is the first to apply a DNA-based approach to digenean diversity in marine fishes in Brazil and we believe that both morphological descriptions and molecular sequence data provided in our study will aid future research assessing the diversity of digenean trematodes of A. thazard and other marine fishes in Brazil.
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Affiliation(s)
- Camila Pantoja
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Institute of Ecology, Nature Research Centre Akademijos 2 08412
Vilnius Lithuania
,Corresponding author:
| | - Bruno Telles
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Departamento de Parasitologia Animal, Universidade Federal Rural do Rio de Janeiro BR 465 km 7 23890-000
Seropédica Rio de Janeiro Brazil
| | - Fabiano Paschoal
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Programa de Pós-Graduação em Biodiversidade e Conservação, Departamento de Oceanografia e Limnologia, Uiversidade Federal do Maranhão Av. dos Portugueses 1966 65080-805
São Luís Maranhão Brazil
| | - José Luis Luque
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Departamento de Parasitologia Animal, Universidade Federal Rural do Rio de Janeiro BR 465 km 7 23890-000
Seropédica Rio de Janeiro Brazil
| | - Olena Kudlai
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Institute of Ecology, Nature Research Centre Akademijos 2 08412
Vilnius Lithuania
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57
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Mincarone MM, Eduardo LN, Di Dario F, Frédou T, Bertrand A, Lucena-Frédou F. New records of rare deep-sea fishes (Teleostei) collected from off north-eastern Brazil, including seamounts and islands of the Fernando de Noronha Ridge. JOURNAL OF FISH BIOLOGY 2022; 101:945-959. [PMID: 35789485 DOI: 10.1111/jfb.15155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Accepted: 06/29/2022] [Indexed: 06/15/2023]
Abstract
Here we report on new data on the occurrence and distribution of rare deep-sea fishes (Teleostei) collected from off north-eastern Brazil, including seamounts and oceanic islands of the Fernando de Noronha Ridge (Rocas Atoll and Fernando de Noronha Archipelago). Collections were made by the French RV Antea during the ABRACOS (Acoustics along the BRAzilian COaSt) expeditions between 29 September and 21 October 2015, and 9 April and 10 May 2017. Occurrences of Photostylus pycnopterus (Alepocephalidae), Gigantura chuni (Giganturidae), Ahliesaurus berryi (Notosudidae), Benthalbella infans, Rosenblattichthys hubbsi, Scopelarchoides danae (Scopelarchidae), Scopelengys tristis (Neoscopelidae), Zu cristatus (Trachipteridae), Stylephorus chordatus (Stylephoridae) and Pseudoscopelus cordilluminatus (Chiasmodontidae) are reported for the first time or confirmed in the Brazilian Exclusive Economic Zone. Photostylus pycnopterus and G. chuni are also recorded for the first time in the western South Atlantic, whereas records of P. cordilluminatus are the first in the western Atlantic. Other records of rare species of those families are also reported and discussed.
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Affiliation(s)
- Michael Maia Mincarone
- Instituto de Biodiversidade e Sustentabilidade, Universidade Federal do Rio de Janeiro, Macaé, Brazil
| | - Leandro Nolé Eduardo
- Departamento de Pesca e Aquicultura, Universidade Federal Rural de Pernambuco, Recife, Brazil
- MARBEC, Universite de Montpellier, CNRS Ifremer, IRD, Montpellier, France
| | - Fabio Di Dario
- Instituto de Biodiversidade e Sustentabilidade, Universidade Federal do Rio de Janeiro, Macaé, Brazil
| | - Thierry Frédou
- Departamento de Pesca e Aquicultura, Universidade Federal Rural de Pernambuco, Recife, Brazil
| | - Arnaud Bertrand
- Departamento de Pesca e Aquicultura, Universidade Federal Rural de Pernambuco, Recife, Brazil
- MARBEC, Universite de Montpellier, CNRS Ifremer, IRD, Montpellier, France
| | - Flávia Lucena-Frédou
- Departamento de Pesca e Aquicultura, Universidade Federal Rural de Pernambuco, Recife, Brazil
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58
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Alexandre EAA, Yamada FH. Diversity and ecology of parasitic fauna of the endemic Serrasalmus brandtii Lütken, 1875 from the Caatinga Domain, Brazil. J NAT HIST 2022. [DOI: 10.1080/00222933.2022.2121233] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Affiliation(s)
| | - Fabio Hideki Yamada
- Laboratório de Ecologia Parasitária (LABEP), Universidade Regional do Cariri (URCA), Crato, Brazil
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59
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Meza-Vargas V, Faustino-Fuster DR, Marchena J, Faustino-Meza N, Ortega H. Fishes from Chira River basin, Piura, Peru. REVISTA PERUANA DE BIOLOGÍA 2022. [DOI: 10.15381/rpb.v29i3.21993] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
Abstract
Chira River is located on the north coast of Peru. The lack of knowledge of the ichthyofauna from coastal drainages from Peru is noteworthy. The aim of this study is to characterize the ichthyofauna along the Chira River basin in terms of diversity and altitudinal range distribution. The material examined belongs to the Ichthyological collection of the Natural History Museum (MUSM). The diversity of fishes is composed of 27 species belonging to 19 families and ten orders. Siluriformes and Characiformes were the most diverse, consisting of 22% (six species) for each one. Five species are new records for the Chira River (three natives and two non-natives). Six marine species and seven exotic species were recorded as well. The altitudinal distribution patterns for all species were registered. This study increases the known diversity of freshwater fishes from Pacific Drainage Rivers in Peru, and it could be used for management and conservation plans.
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60
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Gill transcriptome of the yellow peacock bass (Cichla ocellaris monoculus) exposed to contrasting physicochemical conditions. CONSERV GENET RESOUR 2022. [DOI: 10.1007/s12686-022-01284-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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61
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Managing Water Level for Large Migratory Fish at the Poyang Lake Outlet: Implications Based on Habitat Suitability and Connectivity. WATER 2022. [DOI: 10.3390/w14132076] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
River–lake interaction is important for maintaining biodiversity, yet it is vulnerable to hydrological alteration. The connectivity of the channel connecting Poyang Lake and the Yangtze River not only ensures the regular migration of fish but also makes Poyang Lake a feeding and fattening ground for them. Unfortunately, human activities have dramatically changed the hydrodynamic conditions of Poyang Lake, which is experiencing severe drought due to the obvious decline in the water level in autumn and winter, especially since 2003. However, the possible impacts of the changes in the water level on the habitats of migratory fish remain unclear due to the limitation of traditional techniques in spatiotemporal analysis. Here, we combined a hydrodynamic model and habitat suitability model to simulate variations in the suitable habitat area and their connectivity under different water-level conditions. The conditions for the migration pathway of the target fish were obtained by a hydroacoustic survey using the Simrad EY60 echosounder. The results showed that the change in water level will significantly affect the spatiotemporal change in the suitable habitats and their connectivity. In particular, we found the existence of two thresholds that play a dominant role in illuminating the connectivity of effective suitable habitats (HC). Firstly, the maximum value of the weighted usable area (WUA) and HC can be achieved when the water level is more than 16 m. Secondly, when the water level is between 10 and 16 m, the changes in the HC are sensitive and rapid, and the area flooded at this stage is called the sensitive area. HC is a crucial element in fish migration and habitat conditions. Under the condition of continuous drought in the middle reaches of the Yangtze River, our research contributes to clarifying the influence of water level on key habitats for fish and optimizes the practice of river–lake ecological management.
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62
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Seidlová L, Benovics M, Šimková A. Gill monogeneans of neotropical cichlid fish: diversity, phylogenetic relationships, and host-parasite cophylogenetic associations. Int J Parasitol 2022; 52:603-615. [PMID: 35760375 DOI: 10.1016/j.ijpara.2022.05.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 04/29/2022] [Accepted: 05/03/2022] [Indexed: 11/05/2022]
Abstract
Host-parasite coevolution is one of the main topics of the evolutionary biology of host-parasite associations. The majority of monogeneans parasitizing fish exhibit a high degree of host specificity. As a result, their evolutionary history might be intertwined with that of their fish hosts. The Cichlidae represent a diverse group of secondary freshwater fish with disjunctive distribution. Host-specific dactylogyrid monogeneans commonly parasitize cichlid fish. Their high diversity is associated with the main areas of cichlid distribution, i.e., Neotropical America and Africa. Nevertheless, the parasite fauna of cichlids from Neotropical America is still underexplored. A total of 31 cichlid species were examined for the presence of monogeneans, with 20 of them being parasitized. On these cichlids, 30 monogeneans belonging to the genera Gussevia, Trinidactylus, and Scadicleithrum were identified, 17 of them potentially representing new species for science. Phylogenetic analyses revealed three monophyletic groups of Neotropic cichlid monogeneans. Genus Gussevia was monophyletic, while Sciadicleithrum resulted polyphyletic. Sciedicleithrum from South America and Sciadicleithrum from Mexico represented two divergent lineages. The plesiomorphic Neotropical cichlid host group for dactylogyrid monogeneans was Cichlini, from which the representatives of other Neotropical cichlid tribes were colonized. Cophylogenetic analyses revealed a statistically significant cophylogenetic signal in the investigated host-parasite system, with host switch and duplication representing the main coevolutionary events for monogeneans parasitizing Neotropical cichlids. This scenario is in accordance with previous studies focussed on dactylogyridean monogeneans parasitizing freshwater fish in Europe and Africa.
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Affiliation(s)
- Lucie Seidlová
- Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37 Brno, Czech Republic.
| | - Michal Benovics
- Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37 Brno, Czech Republic
| | - Andrea Šimková
- Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37 Brno, Czech Republic
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63
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Barrera-Guzmán AO, Aleixo A, Faccio M, de Melo Dantas S, Weir JT. Gene flow, genomic homogenization and the timeline to speciation in Amazonian manakins. Mol Ecol 2022; 31:4050-4066. [PMID: 35665558 DOI: 10.1111/mec.16562] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 02/28/2022] [Accepted: 05/12/2022] [Indexed: 11/26/2022]
Abstract
Phylogeographic studies of the most species rich region of the planet - the Amazon basin - repeatedly uncover genetically distinctive, allopatric lineages within currently named species, but understanding whether such lineages are reproductively isolated species is challenging. Here we harness the power of genome-wide datasets together with detailed phylogeographic sampling to both characterize the number of unique lineages and infer levels of reproductive isolation for three parapatric manakin species that make up the genus Pipra. The mitochondrial and nuclear genomes both support six distinctive lineages. The youngest lineages are now highly admixed with each other across major portions of their geographic ranges with one lineage now extinct in a genomically unadmixed state. In contrast, the oldest sets of lineages - dated to 1.4 million years - exhibit narrow hybrid zones. By fitting demographic models to parapatric lineage pairs we found that levels of gene flow and genomic homogenization decline with increasing evolutionary age. Only lineages descending from the 1.4 Ma basal node in the genus experience negligible gene flow, possess genomes resistant to homogenization and are separated by narrow hybrid zones. We conclude that a million years or more were required for Pipra manakins to become reproductively isolated. We suggest the six lineages be reclassified as two or three reproductively isolated species. Our unique approach to quantifying reproductive isolation in parapatric lineages could be applied broadly to other phylogeographic studies and would help determine species classification of the plethora of newly identified lineages in the Amazon basin and other regions.
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Affiliation(s)
- Alfredo O Barrera-Guzmán
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada.,Department of Biological Sciences, University of Toronto Scarborough, Toronto, Ontario, Canada.,Departamento de Biología Marina, Campus de Ciencias biológicas y Agropecuarias, Universidad Autónoma de Yucatán
| | - Alexandre Aleixo
- Pós-graduação em Biodiversidade e Evolução, Museu Paraense Emílio Goeldi, Belém, Brazil.,Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland
| | - Maya Faccio
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada.,Department of Biological Sciences, University of Toronto Scarborough, Toronto, Ontario, Canada
| | - Sidnei de Melo Dantas
- Pós-graduação em Biodiversidade e Evolução, Museu Paraense Emílio Goeldi, Belém, Brazil
| | - Jason T Weir
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada.,Department of Biological Sciences, University of Toronto Scarborough, Toronto, Ontario, Canada.,Department of ornithology, Royal Ontario Museum, Toronto, Ontario, Canada
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64
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de Fátima Cracco A, Lehun AL, Takemoto RM. Composition and structure of the parasitic fauna of Hypostomus spp. (Loricariidae: Hypostominae) from a Neotropical river in Brazil. Parasitol Res 2022; 121:2253-2262. [PMID: 35624383 DOI: 10.1007/s00436-022-07551-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Accepted: 05/13/2022] [Indexed: 11/30/2022]
Abstract
Hypostomus are abundant in Brazilian rivers and streams. In the Ivaí River, the loricariids represent 20.3% of the total species of the basin. Of these 13 species belong to Hypostomus. However, to date, there are no studies on these fish parasitic fauna. Thus, this research aimed to analyze the distribution of the parasitic infracommunity of six species of Hypostomus from the Ivaí River and investigate how the infracommunity is structured in these hosts. One hundred and twenty-eight fish were analyzed, belonging to six sympatric species of Hypostomus (Hypostomus hermanni, H. cochliodon, H. albopunctatus, H. regani, Hypostomus sp.1, and Hypostomus sp.2); of these, 92.9% were parasitized with at least one taxon, totaling 1478 specimens of parasites. The parasitic fauna was composed of the ectoparasites Trinigyrus anthus, T. carvalhoi, Unilatus unilatus (monogeneans), and Placobdella spp. (hirudinea), and the endoparasites Austrodiplostomum compactum (digenean) and Procamallanus annipetterae (nematode). The parasites exhibited similar patterns of infection in all hosts, including a low number of species, low diversity, and numerical dominance of a group of parasites. However, permutational multivariate analysis of variance (PERMANOVA) showed different parasite species compositions among the hosts. Hypostomus cochliodon and H. regani had the highest parasite richness, while Hypostomus sp.1 and Hypostomus sp.2 showed low abundance and intensity of parasitic infections. However, Hypostomus sp.1 showed the highest values of evenness, although the parasite composition in both species did not differ. The results presented herein contribute to increasing the knowledge about the parasitic fauna of Hypostomus spp. from the Ivaí River by presenting new hosts and locality records.
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Affiliation(s)
- Aparecida de Fátima Cracco
- Programa de Pós-Graduação Em Biologia Comparada, Universidade Estadual de Maringá, Maringá, Paraná, Brazil.
| | - Atsler Luana Lehun
- Programa Em Ecologia de Ambientes Aquáticos Continentais, Universidade Estadual de Maringá, Maringá, Paraná, Brazil
| | - Ricardo Massato Takemoto
- Programa de Pós-Graduação Em Biologia Comparada, Universidade Estadual de Maringá, Maringá, Paraná, Brazil.,Programa Em Ecologia de Ambientes Aquáticos Continentais, Universidade Estadual de Maringá, Maringá, Paraná, Brazil.,Núcleo de Pesquisas Em Limnologia, Ictiologia E Aquicultura, NUPELIA, Universidade Estadual de Maringá, Maringá, Paraná, Brazil
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65
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Kolmann MA, Marques FPL, Weaver JC, Dean MN, Fontenelle JP, Lovejoy NR. Ecological and Phenotypic Diversification after A Continental Invasion in Neotropical Freshwater Stingrays. Integr Comp Biol 2022; 62:424-440. [PMID: 35482600 DOI: 10.1093/icb/icac019] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 04/07/2022] [Accepted: 04/07/2022] [Indexed: 11/13/2022] Open
Abstract
Habitat transitions are key potential explanations for why some lineages have diversified and others have not - from Anolis lizards to Darwin's finches. The ecological ramifications of marine-to-freshwater transitions for fishes suggest evolutionary contingency: some lineages maintain their ancestral niches in novel habitats (niche conservatism), whereas others alter their ecological role. However, few studies have considered phenotypic, ecological, and lineage diversification concurrently to explore this issue. Here, we investigated the macroevolutionary history of the taxonomically and ecologically diverse Neotropical freshwater river rays (subfamily Potamotrygoninae), which invaded and diversified in the Amazon and other South American rivers during the late Oligocene to early Miocene. We generated a time-calibrated, multi-gene phylogeny for Potamotrygoninae and reconstructed evolutionary patterns of diet specialization. We measured functional morphological traits relevant for feeding and used comparative phylogenetic methods to examine how feeding morphology diversified over time. Potamotrygonine trophic and phenotypic diversity are evenly partitioned (non-overlapping) among internal clades for most of their history, until 20-16 mya, when more recent diversification suggests increasing overlap among phenotypes. Specialized piscivores (Heliotrygon and Paratrygon) evolved early in the history of freshwater stingrays, while later trophic specialization (molluscivory, insectivory, and crustacivory) evolved in the genus Potamotrygon. Potamotrygonins demonstrate ecological niche lability in diets and feeding apparatus; however, diversification has mostly been a gradual process through time. We suggest that competition is unlikely to have limited the potamotrygonine invasion and diversification in South America.
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Affiliation(s)
- M A Kolmann
- Department of Biology, University of Louisville, 139 Life Sciences Bldg. Louisville, KY, 40292USA.,Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada
| | - F P L Marques
- Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, Cidade Universitária, 05508-090 São Paulo, SP, Brazil
| | - J C Weaver
- Wyss Institute for Biologically Inspired Engineering, Harvard University, Cambridge, MA, USA02138
| | - M N Dean
- Department of Biomaterials, Max Planck Institute of Colloids and Interfaces, Potsdam, Germany.,Department of Infectious Diseases & Public Health, City University of Hong Kong, Kowloon, Hong Kong
| | - J P Fontenelle
- Institute of Forestry and Conservation, University of Toronto, Toronto, ON, Canada
| | - N R Lovejoy
- Department of Biological Sciences, University of Toronto Scarborough, Toronto, ON, Canada
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66
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Amorim PF, Costa WJEM. Evolution and biogeography of
Anablepsoides
killifishes shaped by Neotropical geological events (Cyprinodontiformes, Aplocheilidae). ZOOL SCR 2022. [DOI: 10.1111/zsc.12539] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Pedro F. Amorim
- Laboratory of Systematics and Evolution of Teleost Fishes Institute of Biology Federal University of Rio de Janeiro Rio de Janeiro Brazil
| | - Wilson J. E. M. Costa
- Laboratory of Systematics and Evolution of Teleost Fishes Institute of Biology Federal University of Rio de Janeiro Rio de Janeiro Brazil
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67
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Frable BW, Melo BF, Fontenelle JP, Oliveira C, Sidlauskas BL. Biogeographic reconstruction of the migratory Neotropical fish family Prochilodontidae (Teleostei: Characiformes). ZOOL SCR 2022. [DOI: 10.1111/zsc.12531] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Benjamin W. Frable
- Marine Vertebrate Collection Scripps Institution of Oceanography University of California San Diego La Jolla California USA
| | - Bruno F. Melo
- Department of Ichthyology American Museum of Natural History New York New York USA
| | - João P. Fontenelle
- Institute of Forestry and Conservation University of Toronto Toronto Ontario Canada
| | - Claudio Oliveira
- Departamento de Biologia Estrutural e Funcional, Instituto de Biociências Universidade Estadual Paulista Botucatu São Paulo Brazil
| | - Brian L. Sidlauskas
- Department of Fisheries, Wildlife and Conservation Sciences Oregon State University Corvallis Oregon USA
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68
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Magalhães ALB, Brito MFG, Silva LGM. The fluorescent introduction has begun in the southern hemisphere: presence and life-history strategies of the transgenic zebrafish Danio rerio (Cypriniformes: Danionidae) in Brazil. STUDIES ON NEOTROPICAL FAUNA AND ENVIRONMENT 2022. [DOI: 10.1080/01650521.2021.2024054] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- André Lincoln Barroso Magalhães
- PPG Tecnologias para o Desenvolvimento Sustentável, Universidade Federal de São João Del Rei, Ouro Branco, Minas Gerais, Brazil
| | | | - Luiz Gustavo Martins Silva
- PPG Tecnologias para o Desenvolvimento Sustentável, Universidade Federal de São João Del Rei, Ouro Branco, Minas Gerais, Brazil
- Stocker Lab, Institute of Environmental Engineering, Zurich, Switzerland
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69
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Guimarães KLA, Rosso JJ, González-Castro M, Souza MFB, Díaz de Astarloa JM, Rodrigues LRR. A new species of Hoplias malabaricus species complex (Characiformes: Erythrinidae) from the Crepori River, Amazon basin, Brazil. JOURNAL OF FISH BIOLOGY 2022; 100:425-443. [PMID: 34792799 DOI: 10.1111/jfb.14953] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Revised: 10/27/2021] [Accepted: 11/15/2021] [Indexed: 06/13/2023]
Abstract
A new species belonging to the Hoplias malabaricus complex from the Amazon basin, Brazil, is described. The new species is characterized by 15-16 predorsal scales, 37-39 lateral-line scales, 5 scales from dorsal fin to lateral line, 38-39 vertebrae, iii-iv, 7-8 anal-fin rays, ii-iv, 12-15 caudal-fin rays, last vertical series of scales on the base of caudal-fin rays forming a straight line, 6-7 dark bands in anal fin and no distinctive dark bands or blotches on flanks. The new species is also distinguished from other congeners of the H. malabaricus species-group by means of landmark-based morphometrics and DNA Barcoding (Cytochrome c Oxidase I gene). An identification key to species of the H. malabaricus species complex is provided.
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Affiliation(s)
- Karen L A Guimarães
- Programa de Pós-graduação em Biodiversidade e Biotecnologia (Rede BIONORTE - Polo Pará), Universidade Federal do Oeste do Pará, Instituto de Saúde Coletiva, Santarém, Brazil
- Laboratório de Genética e Biodiversidade, Universidade Federal do Oeste do Pará, Instituto de Ciências da Educação, Santarém, Brazil
| | - Juan J Rosso
- Grupo de Biotaxonomía Morfológica y Molecular de Peces, Instituto de Investigaciones Marinas y Costeras, Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina
| | - Mariano González-Castro
- Grupo de Biotaxonomía Morfológica y Molecular de Peces, Instituto de Investigaciones Marinas y Costeras, Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina
| | - Mendelsohn F B Souza
- Laboratório de Genética e Biodiversidade, Universidade Federal do Oeste do Pará, Instituto de Ciências da Educação, Santarém, Brazil
| | - Juan M Díaz de Astarloa
- Grupo de Biotaxonomía Morfológica y Molecular de Peces, Instituto de Investigaciones Marinas y Costeras, Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina
| | - Luís R R Rodrigues
- Programa de Pós-graduação em Biodiversidade e Biotecnologia (Rede BIONORTE - Polo Pará), Universidade Federal do Oeste do Pará, Instituto de Saúde Coletiva, Santarém, Brazil
- Laboratório de Genética e Biodiversidade, Universidade Federal do Oeste do Pará, Instituto de Ciências da Educação, Santarém, Brazil
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70
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Mejía-Estrada M, Jiménez-Segura LF, Hernández-Zapata M, Soto Calderón I. Contribution to a reference library of DNA barcodes of Colombian freshwater fishes. Biodivers Data J 2022; 10:e65981. [PMID: 35068977 PMCID: PMC8758633 DOI: 10.3897/bdj.10.e65981] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Accepted: 12/28/2021] [Indexed: 11/30/2022] Open
Abstract
Background The Barcode of Life initiative was originally motivated by the large number of species, taxonomic difficulties and the limited number of expert taxonomists. Colombia has 1,610 freshwater fish species and comprises the second largest diversity of this group in the world. As genetic information continues to be limited, we constructed a reference collection of DNA sequences of Colombian freshwater fishes deposited in the Ichthyology Collection of the University of Antioquia (CIUA), thus joining the multiple efforts that have been made in the country to contribute to the knowledge of genetic diversity in order to strengthen the inventories of biological collections and facilitate the solution of taxonomic issues in the future. New information This study contributes to the knowledge on the DNA barcodes and occurrence records of 96 species of Colombian freshwater fishes. Fifty-seven of the species represented in this dataset were already available in the Barcode Of Life Data System (BOLD System), while 39 correspond to new species to the BOLD System. Forty-nine specimens were collected in the Atrato River Basin and 708 in the Magdalena-Cauca asin during the period 2010-2020. Two species (Loricariichthysbrunneus (Hancock, 1828) and Poeciliasphenops Valenciennes, 1846) are considered exotic to the Atrato, Cauca and Magdalena Basins and four species (Oncorhynchusmykiss (Walbaum, 1792), Oreochromisniloticus (Linnaeus, 1758), Parachromisfriedrichsthalii (Heckel, 1840) and Xiphophorushelleri Heckel, 1848) are exotic to the Colombian hydrogeographic regions. All specimens are deposited in CIUA and have their DNA barcodes made publicly available in the BOLD online database. The geographical distribution dataset can be freely accessed through the Global Biodiversity Information Facility (GBIF).
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71
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Mariac C, Duponchelle F, Miranda G, Ramallo C, Wallace R, Tarifa G, Garcia-Davila C, Ortega H, Pinto J, Renno JF. Unveiling biogeographical patterns of the ichthyofauna in the Tuichi basin, a biodiversity hotspot in the Bolivian Amazon, using environmental DNA. PLoS One 2022; 17:e0262357. [PMID: 34982802 PMCID: PMC8726463 DOI: 10.1371/journal.pone.0262357] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Accepted: 12/21/2021] [Indexed: 11/18/2022] Open
Abstract
To date, more than 2400 valid fish species have been recorded in the Amazon basin. However, some regions remain poorly documented. This is the case in the Beni basin and in particular in one of its main sub-basins, the Tuichi, an Andean foothills rivers flowing through the Madidi National Park in the Bolivian Amazonia. The knowledge of its ichthyological diversity is, however, essential for the management and protection of aquatic ecosystems, which are threatened by the development of infrastructures (dams, factories and cities), mining and deforestation. Environmental DNA (eDNA) has been relatively little used so far in the Amazon basin. We sampled eDNA from water in 34 sites in lakes and rivers in the Beni basin including 22 sites in the Tuichi sub-basin, during the dry season. To assess the biogeographical patterns of the amazonian ichthyofauna, we implemented a metabarcoding approach using two pairs of specific primers designed and developed in our laboratory to amplify two partially overlapping CO1 fragments, one of 185bp and another of 285bp. We detected 252 fish taxa (207 at species level) among which 57 are newly identified for the Beni watershed. Species compositions are significantly different between lakes and rivers but also between rivers according to their hydrographic rank and altitude. Furthermore, the diversity patterns are related to the different hydro-ecoregions through which the Tuichi flows. The eDNA approach makes it possible to identify and complete the inventory of the ichthyofauna in this still poorly documented Amazon basin. However, taxonomic identification remains constrained by the lack of reference barcodes in public databases and does not allow the assignment of all OTUs. Our results can be taken into account in conservation and management strategies and could serve as a baseline for future studies, including on other Andean tributaries.
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Affiliation(s)
- Cédric Mariac
- DIADE, Univ Montpellier, CIRAD, IRD, Montpellier, France
- Laboratoire Mixte International—Evolution et Domestication de l’Ichtyofaune Amazonienne (LMI—EDIA), IIAP, UAGRM, IRD, Paris, France
- * E-mail:
| | - Fabrice Duponchelle
- Laboratoire Mixte International—Evolution et Domestication de l’Ichtyofaune Amazonienne (LMI—EDIA), IIAP, UAGRM, IRD, Paris, France
- MARBEC, Univ Montpellier, CNRS, Ifremer, IRD, Montpellier, France
| | - Guido Miranda
- Laboratoire Mixte International—Evolution et Domestication de l’Ichtyofaune Amazonienne (LMI—EDIA), IIAP, UAGRM, IRD, Paris, France
- Wildlife Conservation Society, Bolivia Program, La Paz, Bolivia
- Unidad de Limnología, Instituto de Ecología, Universidad Mayor de San Andrés, La Paz, Bolivia
| | - Camila Ramallo
- Wildlife Conservation Society, Bolivia Program, La Paz, Bolivia
| | - Robert Wallace
- Wildlife Conservation Society, Bolivia Program, La Paz, Bolivia
| | - Gabriel Tarifa
- Wildlife Conservation Society, Bolivia Program, La Paz, Bolivia
| | - Carmen Garcia-Davila
- Laboratoire Mixte International—Evolution et Domestication de l’Ichtyofaune Amazonienne (LMI—EDIA), IIAP, UAGRM, IRD, Paris, France
- Instituto de Investigaciones de la Amazonía Peruana (IIAP), Laboratorio de Biología y Genética Molecular (LBGM), Iquitos, Perú
| | - Hernán Ortega
- Departamento de Ictiología, Museo de Historia Natural, Universidad Nacional Mayor San Marcos, Lima, Peru
| | - Julio Pinto
- Unidad de Limnología, Instituto de Ecología, Universidad Mayor de San Andrés, La Paz, Bolivia
| | - Jean-François Renno
- DIADE, Univ Montpellier, CIRAD, IRD, Montpellier, France
- Laboratoire Mixte International—Evolution et Domestication de l’Ichtyofaune Amazonienne (LMI—EDIA), IIAP, UAGRM, IRD, Paris, France
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72
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Duarte C, Farago TLB, dos Anjos CS, dos Santos NR, do Nascimento LM, Cella-Ribeiro A, de Deus CP. Spatial and seasonal variation of benthic fish assemblages in whitewater rivers of Central Amazon. BIOTA NEOTROPICA 2022. [DOI: 10.1590/1676-0611-bn-2021-1312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Abstract Despite the high number of fish species described for the Amazon region, the ichthyofauna that inhabits the depths of the main channels of large tropical rivers is one of the least known. In order to know the diversity patterns of these fish in whitewater rivers of the Central Amazon, we used data from the main channel benthic fish assemblage of the Japurá, Purus and Madeira rivers and tested the hypothesis that there are marked spatial and seasonal differences in the composition of the fish community among them. For this, we used a multivariate dispersion test, total β diversity and its decomposition into local (LCBD) and species contribution to β diversity (SCBD). Additionally, we tested for relationships between LCBD values and richness, total abundance, and environmental variables. We categorized species with higher SCBD values into resident or migratory to investigate the potential importance of floodplains to benthic fish assemblage of the main channel of whitewater rivers. Our results corroborate the proposed hypothesis, showing that there are seasonal and inter-river differences in benthic ichthyofauna, being more evident for the Purus River. LCBD showed strong negative relationships with species richness and total abundance, particularly in the Japurá and Madeira rivers in rising season, indicating that rivers and season with high uniqueness in their composition also had low richness and abundance. LCBD was negatively correlated with conductivity and pH, which increased with declining these environmental variables, as observed mainly in Japurá River in both seasons. Approximately one third of the species had higher than average SCBD values and were considered major contributors to β diversity, as well as classified as migratory. This demonstrates the importance of conducting studies that use spatial and seasonal variables, in addition to including the background fish fauna in conservation studies, expanding the protected area and taking into account the different patterns of diversity between rivers. Furthermore, these differences in assemblage composition might be explained by the asymmetrical spatial use of habitats during different seasons, strongly suggesting the importance of the flood-pulse cycle for maintaining diversity in this environment.
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Affiliation(s)
- Cleber Duarte
- Instituto Nacional de Pesquisas da Amazônia, Brasil; Universidade Estadual da Paraíba, Brasil
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73
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OLIVEIRA LUCASSDE, CAJADO RUINERISA, SANTOS LUANRDOS, ZACARDI DIEGOM. Structure of the ichthyoplankton community in a Neotropical floodplain lake affected by environmental degradation. AN ACAD BRAS CIENC 2022; 94:e20201598. [DOI: 10.1590/0001-3765202220201598] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Accepted: 04/21/2021] [Indexed: 01/06/2023] Open
Affiliation(s)
| | - RUINERIS A. CAJADO
- Universidade Federal do Oeste do Pará (UFOPA), Brazil; Universidade Federal do Pará (UFPA), Brazil
| | | | - DIEGO M. ZACARDI
- Universidade Federal do Oeste do Pará (UFOPA), Brazil; Universidade Federal do Pará (UFPA), Brazil
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74
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Bogotá-Gregory JD, Lima FCT, Donascimiento C, Acosta-Santos A, Villa-Navarro FA, Usma-Oviedo JS, Ortega-Lara A, Castro-Pulido W, Córdoba EA. Fishes of the Mitú Region: middle basin of the río Vaupés, Colombian Amazon. BIOTA NEOTROPICA 2022. [DOI: 10.1590/1676-0611-bn-2021-1244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract: The Amazon River basin hosts the most diverse freshwater ichthyofauna in the world, and yet huge areas of the basin remain unexplored. This is the case for the upper tributaries of the rio Negro, especially those draining the Colombian territory. Here we present a list of 224 species derived from the examination of specimens collected in the Mitú region (Vaupés Department, Colombia), the middle basin of the río Vaupés. Of the species identified in our study, 10 species are recorded from Colombia for the first time, and 26 species are newly recorded from the Colombian Amazon. The number of species we present here comprise almost one-third of the known species diversity of the Colombian Amazon and nearly a tenth of the total number of those known across the entirety of the Amazon basin. The most diverse orders were Characiformes (120 species) and Siluriformes (65 species), and the remaining six orders comprised less than 20% of total species. The study area comprised blackwater systems, which are considered to be nutrient-poor environments. We discuss some ecological aspects that might explain how this highly diverse ichthyofauna originates and is maintain in less productive systems. The list presented here adds an important number of new records and complements the information derived from previous studies, carried out thus far with regards to the fish fauna of the Colombian Amazon.
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Affiliation(s)
- Juan D Bogotá-Gregory
- Instituto Amazónico de Investigaciones Científicas Sinchi, Colombia; Fundación para la Investigación y el Desarrollo Sostenible, Colombia
| | - Flávio C. T. Lima
- Museu de Zoologia da Universidade Estadual de Campinas “Adão José Cardoso”, Brasil
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75
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Dagosta FCP, Marinho MMF. New small-sized species of Astyanax (Characiformes: Characidae) from the upper rio Paraguai basin, Brazil, with discussion on its generic allocation. NEOTROPICAL ICHTHYOLOGY 2022. [DOI: 10.1590/1982-0224-2021-0127] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract A new species of Astyanax is described from the rio Salobra, tributary of rio Cuiabá, rio Paraguai basin. The new taxon can be distinguished from its congeners by having a well-defined dark midlateral stripe on body extending from the posterior margin of the opercle to the base of middle caudal-fin rays and a single vertical elongate humeral blotch. Although the new species is described in Astyanax, some specimens present an incomplete or a discontinuous series of perforated scales in the lateral line. Therefore, a discussion on its generic allocation is presented. Comments on different patterns of coloration among dark-striped species of Astyanax are also provided. The discovery of a new species in an underwater tourist point relatively near a large urban center underscores that even fish species daily observed by hundreds of people in limpid waters may lack a formal taxonomic identity. Such finding also highlights how the megadiverse Brazilian freshwater ichthyofauna still needs efforts and investments to identify and describe new taxa.
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76
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Brandão H, Lange D, Blanco DR, Kampfert LEP, Ramos IP. Ichthyofauna of Santa Helena Relevant Ecological Interest Area (REIA), Paraná, Brazil. BIOTA NEOTROPICA 2022. [DOI: 10.1590/1676-0611-bn-2022-1330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Abstract The Relevant Ecological Interest Area (REIA), popularly known as “Refúgio Biológico de Santa Helena”, is part of the Atlantic Forest Biome and one of the 78 ecoregions mapped by IBAMA as basic unit for planning priorities focused on national biodiversity conservation. Quarterly collections were carried out from November 2017 to November 2019 to inventory the ichthyofauna of this Conservation Unit. Specimens were captured with the aid of gillnets, fishing sieve and seine. In total, 3,919 specimens belonging to two class, eight orders, 27 families and 74 species were sampled. Characiformes and Siluriformes presented the highest species richness; they accounted for 40 (54%) and 17 (23%) species, respectively. Geophagus sveni (181 individuals = 17%), Trachelyopterus galeatus (109 individuals = 10%) and Schizodon borellii (105 individuals = 10%) were the most abundant fish species captured with gillnet. Moenkhausia was the most abundant genus captured with seine and fishing sieve, with emphasis on species Moenkhausia bonita (930 individuals = 33%) and Moenkhausia gracilima (845 individuals = 30%). Moreover, two “endangered” species (Brycon orbignyanus and Pseudoplatystoma corruscans) were registered. Therefore, we present an updated inventory of species belonging to the ichthyofauna of REIA, and it may contribute to future management plans focused on this Conservation Unit.
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Affiliation(s)
| | - Denise Lange
- Universidade Tecnológica Federal do Paraná, Brasil
| | | | | | - Igor Paiva Ramos
- Universidade Estadual Paulista, Brasil; Universidade Estadual Paulista, Brasil
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77
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Perkin JS, Montaña CG, Nogueira EJ, Brandão BB, Mattox GMT, Conway KW. Estimated richness and environmental correlates of miniature fish assemblages in the rio Jacundá, Brazil. NEOTROPICAL ICHTHYOLOGY 2022. [DOI: 10.1590/1982-0224-2021-0051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract South America is home to more miniature fishes (<26 mm in standard length) than any other continent. Despite this diversity, the ecology of miniature fishes is poorly studied. To promote the study of miniature fish ecology, we investigated patterns in total richness, assemblage structure and environmental correlates for miniature fishes in the rio Jacundá drainage of the Lower Amazon River basin, Pará State. Based on multi-pass dip-netting of leaf litter at 20 locations distributed across two sites, we collected miniature species and used rarefaction to estimate 9 to 14 species might be present. The miniature fish assemblage at the upstream site was a nested subset of the downstream site, and water pH and canopy cover, two features known to be altered by deforestation, correlated most strongly with assemblage variation. Our work represents one of the first quantitative assessments of environmental correlates with miniature fish assemblages and highlights research topics that should be investigated further to promote conservation and preservation of the overlooked and understudied Amazonian diminutive freshwater fish fauna.
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78
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Chamon CC, Serra JP, Camelier P, Zanata AM, Fichberg I, Marinho MMF. Building knowledge to save species: 20 years of ichthyological studies in the Tocantins-Araguaia River basin. BIOTA NEOTROPICA 2022. [DOI: 10.1590/1676-0611-bn-2021-1296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract: The Tocantins-Araguaia River basin is the largest basin located entirely in the Brazilian territory. The high degree of endemism of its ichthyofauna has been revealed in several studies, with the upper Tocantins River having the largest absolute number of endemic taxa within the Amazon basin. Here we provide an accurate review of the ichthyofauna of the Tocantins-Araguaia River basin, based on collections made between 2000-2020, including an extensive list of valid fish species occurring in the basin and a discussion of the major threats to its ichthyofauna. Ichthyofauna diversity was further refined based on web searches. Protected Areas and hydropower plants were mapped using shape files or coordinates from the responsible government agencies. 751 species of fishes are currently known from the Tocantins-Araguaia River basin. A considerable increase in fish diversity knowledge occurred in the last 20 years, in parallel with significant anthropic alterations in the basin and its surroundings. Dams constructed along the basin are ranked as the major threats to ichthyofauna. Although the drainage-basin holds several conservation units and indigenous lands, they have not been sufficient to guarantee the preservation of fish species. Our compilation emphasizes that the upper Tocantins River must be considered as a priority area to preserve fish species. Some mitigation actions that may achieve satisfactory results concerning ichthyofauna conservation are proposed.
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79
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Bogotá-Gregory JD, DoNascimiento C, Lima FCT, Acosta-Santos A, Villa-Navarro FA, Urbano-Bonilla A, Mojica JI, Agudelo E. Fishes from the Colombian Amazonia region: species composition from the river systems within the rainforest biome. BIOTA NEOTROPICA 2022. [DOI: 10.1590/1676-0611-bn-2022-1392] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Abstract The Colombian Amazon region is part of the Neotropical rainforest (humid forest biome) covering an area of 483,163 km2 and includes tributaries of both the Amazon and Orinoco River basins. The aquatic ecosystems found there include: rivers and alluvial plains originating in Andean headwaters, on eroded soils of tropical forests in the lowlands, and Guiana Shield formations, comprising a dense fluvial drainage network in the lowlands, with Paleogene/Neogene geological formations (terra firme streams in higher places that don’t usually flood) and Paleozoic (shield streams); and Andean and Guiana Shield streams above 200–250 m a.s.l. We present here an exhaustive compilation of published information, supported by fish collections, consisting of a list of 1104 species distributed in 375 genera, 53 families, and 16 orders. We include occurrence data of these species in each sub-basin. The presence/absence species matrix was analyzed using a dendrogram and non-metric multidimensional scaling (NMDS) analysis to identify patterns of similarity between basins and sub-basins. We evaluated species composition between basins and among the different geological origins using PERMANOVA. The dendrogram shows co-occurrences of 404 species in the two basins. It also shows two clear groupings of the sub-basins of the Amazon (except Guainía-Negro drainages) and those of the Orinoco. Within the Amazon Basin, there are two nodes according to the geological origin: systems of Andean origin and those of the lowlands. The dendrogram results are consistent with the NMDS analysis, which shows a clear grouping according to the connectivity of the basins; the Guainía-Negro is included in the Amazon basin. Species distribution patterns were supported by the PERMANOVA, and differed significantly between basins (F = 4.3, R = 0.26, P = 0.003) and geological origin (F = 3.6, R = 0.23, P = 0.003). The number of species in this study represents almost a fifth of the ichthyofauna of the Neotropics and about a third of that of the Amazon River basin; clearly supporting Colombia’s status among the countries with the greatest diversity of freshwater fish species of the planet. We include here a significant number of new records (75 spp), provide a first approximation of the distribution patterns, and a framework for future biogeographical studies.
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Affiliation(s)
| | | | | | | | | | | | | | - Edwin Agudelo
- Instituto Amazónico de Investigaciones Científicas-SINCHI, Colombia
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80
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Villarins BT, Dario FD, Eduardo LN, Lucena-Frédou F, Bertrand A, Prokofiev AM, Mincarone MM. Deep-sea dragonfishes (Teleostei: Stomiiformes) collected from off northeastern Brazil, with a review of the species reported from the Brazilian Exclusive Economic Zone. NEOTROPICAL ICHTHYOLOGY 2022. [DOI: 10.1590/1982-0224-2022-0004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract The Stomiiformes includes about 455 species of mostly mesopelagic fishes in the families Diplophidae, Gonostomatidae, Phosichthyidae, Sternoptychidae, and Stomiidae. Here we report 55 species of the order collected during the ABRACOS (Acoustics along the BRAzilian COaSt) expeditions off northeastern Brazil, including islands and seamounts of Fernando de Noronha Ridge. Triplophos hemingi (Diplophidae), Pachystomias microdon and Melanostomias biseriatus (Stomiidae) are recorded for the first time in the western South Atlantic. Eustomias bibulbosus, Grammatostomias ovatus and Photonectes achirus (Stomiidae) are recorded for the first time in the South Atlantic. Eustomias minimus (Stomiidae), previously known from four poorly preserved specimens, is reported for the first time in the Atlantic. Occurrences of 18 species are confirmed or recorded for the first time in the Brazilian Exclusive Economic Zone: Triplophos hemingi (Diplophidae), Gonostoma denudatum (Gonostomatidae), Aristostomias grimaldii, Astronesthes gudrunae, Bathophilus nigerrimus, Borostomias elucens, Eustomias bibulbosus, E. braueri, E. minimus, E. schmidti, Grammatostomias ovatus, G. dentatus, Leptostomias gladiator, Melanostomias biseriatus, M. bartonbeani, Pachystomias microdon, Photonectes achirus, and Photostomias goodyeari (Stomiidae). Diagnostic and distributional data for all species recorded are provided, with new anatomical information presented for Melanostomias bartonbeani and Grammatostomias ovatus. A checklist of the 108 species of Stomiiformes confirmed in Brazilian waters is also presented.
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Affiliation(s)
| | | | - Leandro N. Eduardo
- Universidade Federal Rural de Pernambuco, Brazil; Universidade Montpellier, France
| | | | - Arnaud Bertrand
- Universidade Federal Rural de Pernambuco, Brazil; Universidade Montpellier, France
| | - Artem M. Prokofiev
- Russian Academy of Sciences, Russia; Russian Academy of Sciences, Russia
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81
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Brito PRMD, Pereira LHG, Roxo FF, Monteiro JH, Oiveira C, Silva GJDC. Fish fauna from a fragmented river in the Atlantic Forest. BIOTA NEOTROPICA 2022. [DOI: 10.1590/1676-0611-bn-2021-1286] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract: This study sought to identify the ichthyofauna composition of the Muzambinho River, an upland tributary of the Paraná River. We also investigate whether waterfalls in the region can serve as barriers to the dispersal of fish species. For this purpose, collections were carried out at 34 points on the Muzambinho River using different techniques. In all, 37 species were recorded, some of which were endemic, and the majority were native. Among these species, some are predominant in degraded places and can be used as bioindicators. The results also demonstrate zonation in the ichthyofauna composition in Muzambinho that segregates the fauna into three sessions separated by waterfalls: Lower Muzambinho, Upper Muzambinho, and Sao Domingos. We conclude that, for the ideal preservation of the ichthyofauna of the Muzambinho River, it is necessary to preserve its sections independently, which would guarantee the maintenance of naturally isolated strains.
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82
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Freitas TMDS, Prudente BDS, Montag LFDA. Flood pulse influence on the feeding ecology of two Amazonian auchenipterid catfishes. NEOTROPICAL ICHTHYOLOGY 2022. [DOI: 10.1590/1982-0224-2021-0103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
ABSTRACT We assessed the flood pulse effect on the diet composition, trophic niche breadth, and the amount of food intake of two Amazonian auchenipterids with different feeding strategies. Sampling was carried out quarterly (from April/2012 to January/2014) on the middle Xingu River, using gillnets. We measured specimens for standard length and total weight. The specimens’ stomachs were removed, weighed, and had their contents identified. We analyzed 360 stomachs of Auchenipterus nuchalis and 584 of Tocantinsia piresi. The diet of A. nuchalis was mainly composed of aquatic insects and crustaceans, while T. piresi fed on fruits and seeds. The diet composition of both species varied seasonally, but only T. piresi changed its trophic niche breadth in response to hydrological changes, becoming more specialist during the higher water periods (filling and flood). Both species also showed differences in their amount of food intake between hydrological periods, with A. nuchalis feeding more intensely in lower water periods (ebb and dry), while T. piresi in the higher water periods. We evidenced different responses to the hydrological periods for the related species. We emphasize that studies considering the relationship between flood pulse and feeding ecology of the organisms are essential to understanding river floodplain systems’ dynamics.
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83
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Dagosta FCP, Seren TJ, Ferreira A, Marinho MMF. The emerald green tetra: a new restricted-range Hyphessobrycon (Characiformes: Characidae) from the upper rio Juruena, Chapada dos Parecis, Brazil. NEOTROPICAL ICHTHYOLOGY 2022. [DOI: 10.1590/1982-0224-2021-0119] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
ABSTRACT A new species of Hyphessobrycon is described from the rio Mutum, a tributary of the rio Juruena, rio Tapajós basin, Brazil. The new taxon can be distinguished from its congeners by the presence of a well-defined and relatively narrow dark midlateral stripe on body, extending from head to the middle caudal-fin rays, presence of a humeral blotch, distal profile of the anal fin falcate in males, 13-16 branched anal-fin rays (vs. 17-26), and 11 or 12 horizontal scale rows around caudal peduncle. The new species shows polymorphism regarding the presence of the adipose fin, and a discussion on this type of polymorphism across the family and its systematic implications is presented.
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84
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Maiztegui T, Paracampo AH, Liotta J, Cabanellas E, Bonetto C, Colautti DC. Freshwater fishes of the Río de la Plata: current assemblage structure. NEOTROPICAL ICHTHYOLOGY 2022. [DOI: 10.1590/1982-0224-2021-0159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Abstract Few studies have addressed the composition of fish assemblages of the freshwater Río de la Plata (RdlP) and have only been limited to species lists gathered over the last two centuries. As such inventories have never been reviewed or validated by fish sampling, the richness and structure of RdlP fish assemblage are poorly known. Hence, we conducted an exhaustive literature review and a fieldwork in six coastal points of Argentina to update the species composition and determine the hierarchical structure of the fish assemblage. From the 206 species registered in the literature, 48 were not confirmed, 13 were absent, five were taken as synonymized species, 29 were supported by literature and 107 were confirmed; one was an established exotic species, and three were a non-established exotic species. The findings reported here suggest that the fish assemblage currently comprises 141 species, including four new records. Analysis of fieldwork data in number and weight of fish captured resulted in an assemblage hierarchical structure of five dominant, 22 frequent, and 45 rare species; 16 dominant, 11 frequent, and 45 rare taxa, respectively. These results could be used as baseline to monitor, manage, and preserve neotropical fish species in their southern distribution boundary.
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Affiliation(s)
- Tomás Maiztegui
- Comisión de Investigaciones Científicas de la provincia de Buenos Aires, Argentina; Universidad Nacional de La Plata, Argentina
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85
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Checklist of nematodes parasitizing fish in the Brazilian Amazon. J Helminthol 2021; 95:e75. [PMID: 34964710 DOI: 10.1017/s0022149x21000729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
This study presents a list of parasitic fish nematodes from the Brazilian Amazon based on the previous Brazilian list including scientific assessments carried out between 2010 and 2021. A total of 16 families, 48 species and 28 undetermined species of nematodes associated with fish are included in the checklist, in addition to 93 host species and 15 geographical records.
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86
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Deoclécio da Silva LM, do Prado FD, Hashimoto DT, Senhorini JA, Foresti F, Porto-Foresti F. Use of Molecular Genetic Methods to Reduce the Risk of Incorrect Identification of Fish Strains in Brazilian Aquaculture. Front Genet 2021; 12:720736. [PMID: 34956306 PMCID: PMC8695485 DOI: 10.3389/fgene.2021.720736] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 11/24/2021] [Indexed: 11/13/2022] Open
Abstract
The identification of fish species using traditional methods is generally based only on morphological characteristics and these methods are currently under review. This kind of identification of hybrid fishes solely based on their morphologies may be unreliable, especially when the samples include juveniles and post-F1 lineage fishes. Therefore, in the present study, we used molecular markers to accurately identify the fish species of economic interest that are used as materials in the projects developed in research institutions. We evaluated six lots of fishes sampled from different research centers, containing a total of 84 specimens acquired from private fish farms that were considered to be the representatives of pure species. Genetic analyses of all the specimens revealed that, globally, 22 samples (26.2%) were interspecific hybrids, while 20 (90.9%) samples were surprisingly characterized as post-F1 hybrids. This result confirms that hybrids are sold in markets without adequate labeling and also indicates the lack of proper control of the commercialization and management of stocks and products in fish farms. In addition, we determined that molecular diagnosis was an extremely effective and necessary method to test the reliability of biological materials currently used in scientific research.
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Affiliation(s)
- Luana Maria Deoclécio da Silva
- Laboratório de Genética de Peixes, Faculdade de Ciências, Departmento de Ciências Biológicas, Universidade Estadual Paulista, Bauru, Brazil
| | - Fernanda Dotti do Prado
- Laboratório de Genética de Peixes, Faculdade de Ciências, Departmento de Ciências Biológicas, Universidade Estadual Paulista, Bauru, Brazil
| | - Diogo Teruo Hashimoto
- Laboratório de Genética em Aquicultura e Conservação, Centro de Aquicultura, Universidade Estadual Paulista, Jaboticabal, Brazil
| | - José Augusto Senhorini
- Centro Nacional de Pesquisa e Conservação da Biota Aquática Continental (CEPTA-ICMBIO), Pirassununga, Brazil
| | - Fausto Foresti
- Laboratório de Biologia e Genética de Peixes, Instituto de Biociências, Universidade Estadual Paulista, Botucatu, Brazil
| | - Fabio Porto-Foresti
- Laboratório de Genética de Peixes, Faculdade de Ciências, Departmento de Ciências Biológicas, Universidade Estadual Paulista, Bauru, Brazil
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87
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Ximenes AM, Bittencourt PS, Machado VN, Hrbek T, Farias IP. Mapping the hidden diversity of the Geophagus sensu stricto species group (Cichlidae: Geophagini) from the Amazon basin. PeerJ 2021; 9:e12443. [PMID: 34909270 PMCID: PMC8641480 DOI: 10.7717/peerj.12443] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Accepted: 10/15/2021] [Indexed: 11/20/2022] Open
Abstract
South American freshwater ichthyofauna is taxonomically the most diverse on the planet, yet its diversity is still vastly underestimated. The Amazon basin alone holds more than half of this diversity. The evidence of this underestimation comes from the backlog of morphologically distinct, yet undescribed forms deposited in museum collections, and from DNA-based inventories which consistently identify large numbers of divergent lineages within even well-studied species groups. In the present study, we investigated lineage diversity within the Geophagus sensu stricto species group. To achieve these objectives, we analyzed 337 individuals sampled from 77 locations within and outside the Amazon basin representing 10 nominal and six morphologically distinct but undescribed species. We sequenced the mitochondrial cytochrome c oxidase subunit I (COI) and delimited lineages using four different single-locus species discovery methods (mPTP-15 lineages; LocMin-14 lineages; bGMYC-18 lineages; and GMYC-30 lineages). The six morphologically distinct but undescribed species were also delimited by the majority of the species discovery methods. Five of these lineages are restricted to a single collection site or a watershed and their habitats are threatened by human activities such as deforestation, agricultural activities and construction of hydroelectric plants. Our results also highlight the importance of combining DNA and morphological data in biodiversity assessment studies especially in taxonomically diverse tropical biotas.
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Affiliation(s)
- Aline Mourão Ximenes
- Departamento de Genética, Instituto de Ciências Biológicas, Universidade Federal do Amazonas, Manaus, Amazonas, Brazil.,Programa de Pós-Graduação em Genética, Conservação e Biologia Evolutiva, Instituto Nacional de Pesquisas da Amazônia, Manaus, Amazonas, Brazil
| | - Pedro Senna Bittencourt
- Departamento de Genética, Instituto de Ciências Biológicas, Universidade Federal do Amazonas, Manaus, Amazonas, Brazil
| | - Valéria Nogueira Machado
- Departamento de Genética, Instituto de Ciências Biológicas, Universidade Federal do Amazonas, Manaus, Amazonas, Brazil
| | - Tomas Hrbek
- Departamento de Genética, Instituto de Ciências Biológicas, Universidade Federal do Amazonas, Manaus, Amazonas, Brazil.,Biology Department, Trinity University, San Antonio, Texas, USA
| | - Izeni Pires Farias
- Departamento de Genética, Instituto de Ciências Biológicas, Universidade Federal do Amazonas, Manaus, Amazonas, Brazil
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88
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Gales SM, Ready JS, Sabaj MH, Bernt MJ, Silva DJF, Oliveira C, Oliveira G, Sales JBL. Molecular diversity and historical phylogeography of the widespread genus Mastiglanis (Siluriformes: Heptapteridae) based on palaeogeographical events in South America. Biol J Linn Soc Lond 2021. [DOI: 10.1093/biolinnean/blab150] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Abstract
The catfish family Heptapteridae, endemic in the Neotropical region, is composed of small- to medium-sized species. The genus Mastiglanis was monotypic until very recently and is often misidentified as Imparfinis because of similarities in diagnostic characters, including the length of maxillary barbels and limited pigmentation. We provide the first molecular inference of diversity for samples identified as Mastiglanis. Partial 16S and COI sequences were produced for 84 samples identified morphologically as Mastiglanis from the Amazon, Orinoco and Essequibo river basins. Species delimitation and phylogenetic methods recovered the genus as monophyletic, but samples assigned to the species Mastiglanis asopos yielded 21 distinct operational taxonomic units, often in sympatry. The first cladogenesis event, at ~12 Mya, was associated with marine incursions and/or vicariance events between the northward-flowing systems in the west and the rivers that drain to the east. Subsequent diversification during the Miocene and Pliocene was inferred to have resulted from environmental changes associated with Andean orogeny, whereas recent diversification in the late Pliocene and Pleistocene was inferred to result from environmental changes during glacial cycles. Despite the many probable cryptic species found across the large geographical distribution of the genus, further sampling is expected to increase taxonomic richness in this genus.
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Affiliation(s)
- Suellen M Gales
- Grupo de Investigação Biológica Integrada, Centro de Estudos Avançados da Biodiversidade (CEABIO), Universidade Federal do Pará, Av. Perimetral da Ciência 01, PCT-Guamá, Lote 11. 66075-750, Belém, PA, Brazil
| | - Jonathan Stuart Ready
- Grupo de Investigação Biológica Integrada, Centro de Estudos Avançados da Biodiversidade (CEABIO), Universidade Federal do Pará, Av. Perimetral da Ciência 01, PCT-Guamá, Lote 11. 66075-750, Belém, PA, Brazil
| | - Mark H Sabaj
- The Academy of Natural Sciences of Philadelphia, Philadelphia, PA, USA
| | - Maxwell J Bernt
- Department of Ichthyology, American Museum of Natural History, NY, USA
| | - Derlan José Ferreira Silva
- Grupo de Investigação Biológica Integrada, Centro de Estudos Avançados da Biodiversidade (CEABIO), Universidade Federal do Pará, Av. Perimetral da Ciência 01, PCT-Guamá, Lote 11. 66075-750, Belém, PA, Brazil
| | - Claudio Oliveira
- Departamento de Biologia Estrutural e Funcional, Instituto de Biociências, Universidade Estadual Paulista, Distrito de Rubião Junior, 250, Botucatu, SP. CEP: 18618-689, Brazil
| | - Guilherme Oliveira
- Instituto Tecnológico Vale, Rua Boa Ventura da Silva, 955, Umarizal, Belém, PA, CEP: 66055-090, Brazil
| | - João Bráullio L Sales
- Grupo de Investigação Biológica Integrada, Centro de Estudos Avançados da Biodiversidade (CEABIO), Universidade Federal do Pará, Av. Perimetral da Ciência 01, PCT-Guamá, Lote 11. 66075-750, Belém, PA, Brazil
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89
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Monitoring fish communities through environmental DNA metabarcoding in the fish pass system of the second largest hydropower plant in the world. Sci Rep 2021; 11:23167. [PMID: 34848787 PMCID: PMC8632987 DOI: 10.1038/s41598-021-02593-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Accepted: 11/08/2021] [Indexed: 12/26/2022] Open
Abstract
The Itaipu Hydroelectric Power Plant is the second largest in the world in power generation. The artificial barrier created by its dam imposes an obstacle for fish migration. Thus, in 2002, a fish pass system, named Piracema Channel, was built to allow fish to access areas upstream of the reservoir. We tested the potential of environmental DNA metabarcoding to monitor the impact of both the dam and associated fish pass system in the Paraná River fish communities and to compare it with traditional monitoring methods. Using a fragment of the 12S gene, we characterized richness and community composition based on amplicon sequence variants, operational taxonomic units, and zero-radius OTUs. We combined GenBank and in-house data for taxonomic assignment. We found that different bioinformatics approaches showed similar results. Also, we found a decrease in fish diversity from 2019 to 2020 probably due to the recent extreme drought experienced in southeastern Brazil. The highest alpha diversity was recorded in the mouth of the fish pass system, located in a protected valley with the highest environmental heterogeneity. Despite the clear indication that the reference databases need to be continuously improved, our results demonstrate the analytical efficiency of the metabarcoding to monitor fish species.
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90
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Říčan O, Dragová K, Almirón A, Casciotta J, Gottwald J, Piálek L. MtDNA species-level phylogeny and delimitation support significantly underestimated diversity and endemism in the largest Neotropical cichlid genus (Cichlidae: Crenicichla). PeerJ 2021; 9:e12283. [PMID: 34820161 PMCID: PMC8588857 DOI: 10.7717/peerj.12283] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2021] [Accepted: 09/20/2021] [Indexed: 12/29/2022] Open
Abstract
Crenicichla is the largest and most widely distributed genus of Neotropical cichlids. Here, we analyze a mtDNA dataset comprising 681 specimens (including Teleocichla, a putative ingroup of Crenicichla) and 77 out of 105 presently recognized valid species (plus 10 out of 36 nominal synonyms plus over 50 putatively new species) from 129 locations in 31 major river drainages throughout the whole distribution of the genus in South America. Based on these data we make an inventory of diversity and highlight taxa and biogeographic areas worthy of further sampling effort and conservation protection. Using three methods of molecular species delimitation, we find between 126 and 168 species-like clusters, i.e., an average increase of species diversity of 65–121% with a range of increase between species groups. The increase ranges from 0% in the Missioneira and Macrophthama groups, through 25–40% (Lacustris group), 50–87% (Reticulata group, Teleocichla), 68–168% (Saxatilis group), 125–200% (Wallacii group), and 158–241% in the Lugubris group. We found a high degree of congruence between clusters derived from the three used methods of species delimitation. Overall, our results recognize substantially underestimated diversity in Crenicichla including Teleocichla. Most of the newly delimited putative species are from the Amazon-Orinoco-Guiana (AOG) core area (Greater Amazonia) of the Neotropical region, especially from the Brazilian and Guiana shield areas of which the former is under the largest threat and largest degree of environmental degradation of all the Amazon.
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Affiliation(s)
- Oldřich Říčan
- Faculty of Science, Department of Zoology, University of South Bohemia, České Budějovice, Czech Republic
| | - Klára Dragová
- Faculty of Science, Department of Zoology, University of South Bohemia, České Budějovice, Czech Republic
| | - Adriana Almirón
- División Zoología Vertebrados, UNLP, Facultad de Ciencias Naturales y Museo, La Plata, Buenos Aires Province, Argentina
| | - Jorge Casciotta
- CIC, Comisión de Investigaciones Científicas de la Provincia de Buenos Aires, Buenos Aires, Argentina.,UNLP, Facultad de Ciencias Naturales y Museo, División Zoología Vertebrados, Paseo del Bosque, La Plata, Buenos Aires Province, Argentina
| | - Jens Gottwald
- Heinrich-Lödding-Str. 14, 30823 Garbsen, Garbsen, Germany
| | - Lubomír Piálek
- Faculty of Science, Department of Zoology, University of South Bohemia, České Budějovice, Czech Republic
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91
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de Aguiar JCC, Domingues MV, Silva W, Ceccarelli PS, Adriano EA, Soares GB. Morphology and molecular phylogeny of Pauciconfibuloides amazonica gen. n. sp. n. (Platyhelminthes, Monogenoidea) parasitizing the Amazonian croaker Plagioscion squamosissimus. Parasitol Int 2021; 87:102489. [PMID: 34737075 DOI: 10.1016/j.parint.2021.102489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2021] [Revised: 10/19/2021] [Accepted: 10/27/2021] [Indexed: 10/20/2022]
Abstract
An integrative study was performed to understand the phylogenetic relationships of an undescribed, freshwater species of microcotylid parasitizing Plagioscion squamosissimus from the Amazon River Basin. Based on morphological and molecular analysis (18S rDNA and partial 28S rDNA genes), a new genus is proposed to accommodate this new species, Pauciconfibuloides amazonica gen. n. sp. n. The new genus is closely related to Protastomicrocotylinae and Pauciconfibula by sharing the vagina, male copulatory organ, and genital atrium all unarmed. However, Pauciconfibuloides gen. n. can be distinguished from those taxa by the prostatic system and position of the vaginal pore. Molecular phylogenetic inference suggests a sister relationship with species of Polylabris (Prostatomicrocotylinae), but to date, there are no available 18S or 28S rDNA sequences of Pauciconfibula to be compared. This is the first report of a microcotylid parasitizing a freshwater sciaenid from South America.
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Affiliation(s)
- Julio Cesar Cenci de Aguiar
- Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), Rua Monteiro Lobato, 255, CEP 13083-862 Campinas, São Paulo, Brazil; Sistema de Ensino, Campanha Nacional de Escolas da Comunidade (CNEC), Rua Frei Paulino, 530, Nossa Sra. da Abadia, CEP 38025-180 Uberaba, Minas Gerais, Brazil.
| | - Marcus Vinicius Domingues
- Instituto de Estudos Costeiros, Universidade Federal do Pará (UFPA), Travessa Leandro Ribeiro, s/n, Aldeia, CEP 68600-000 Bragança, Pará, Brazil
| | - Willian Silva
- Departamento de Medicina Veterinária, Centro Universitário da Fundação de Ensino Octávio Bastos (UNIFEOB), Av. Dr. Otávio da Silva Bastos, 2439, Jardim Nova São Joao, São João da Boa Vista CEP 13874-149, São Paulo, Brazil
| | - Paulo Sérgio Ceccarelli
- Centro Nacional de Pesquisa e Conservação da Biodiversidade Aquática Continental, Instituto Chico Mendes de Conservação da Biodiversidade (CEPTA/ICMBio), Rodovia Prefeito Euberto Nemésio Pereira de Godoy, km 6,5, CEP 13630-970 Pirassununga, São Paulo, Brazil
| | - Edson Aparecido Adriano
- Departamento de Ecologia e Biologia Evolutiva, Universidade Federal de São Paulo (UNIFESP), Rua Professor Arthur Riedel, 275, Jardim Eldorado, CEP 09972-270 Diadema, São Paulo, Brazil
| | - Geusivam Barbosa Soares
- Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), Rua Monteiro Lobato, 255, CEP 13083-862 Campinas, São Paulo, Brazil
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Melo BF, Albert JS, Dagosta FCP, Tagliacollo VA. Biogeography of curimatid fishes reveals multiple lowland-upland river transitions and differential diversification in the Neotropics (Teleostei, Curimatidae). Ecol Evol 2021; 11:15815-15832. [PMID: 34824792 PMCID: PMC8601890 DOI: 10.1002/ece3.8251] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Revised: 09/13/2021] [Accepted: 09/30/2021] [Indexed: 11/16/2022] Open
Abstract
The Neotropics harbors a megadiverse ichthyofauna comprising over 6300 species with approximately 80% in just three taxonomic orders within the clade Characiphysi. This highly diverse group has evolved in tropical South America over tens to hundreds of millions of years influenced mostly by re-arrangements of river drainages in lowland and upland systems. In this study, we investigate patterns of spatial diversification in Neotropical freshwater fishes in the family Curimatidae, a species-rich clade of the order Characiformes. Specifically, we examined ancestral areas, dispersal events, and shifts in species richness using spatially explicit biogeographic and macroevolutionary models to determine whether lowlands-uplands serve as museums or cradles of diversification for curimatids. We used fossil information to estimate divergence times in BEAST, multiple time-stratified models of geographic range evolution in BioGeoBEARS, and alternative models of geographic state-dependent speciation and extinction in GeoHiSSE. Our results suggest that the most recent common ancestor of curimatids originated in the Late Cretaceous likely in lowland paleodrainages of northwestern South America. Dispersals from lowland to upland river basins of the Brazilian and Guiana shields occurred repeatedly across independently evolving lineages in the Cenozoic. Colonization of upland drainages was often coupled with increased rates of net diversification in species-rich genera such as Cyphocharax and Steindachnerina. Our findings demonstrate that colonization of novel aquatic environments at higher elevations is associated with an increased rate of diversification, although this pattern is clade-dependent and driven mostly by allopatric speciation. Curimatids reinforce an emerging perspective that Amazonian lowlands act as a museum by accumulating species along time, whereas the transitions to uplands stimulate higher net diversification rates and lineage diversification.
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Affiliation(s)
- Bruno F. Melo
- Department of IchthyologyAmerican Museum of Natural HistoryNew YorkNew YorkUSA
| | - James S. Albert
- Department of BiologyUniversity of Louisiana at LafayetteLafayetteLouisianaUSA
| | - Fernando C. P. Dagosta
- Faculdade de Ciências Biológicas e AmbientaisUniversidade Federal da Grande DouradosDouradosBrazil
| | - Victor A. Tagliacollo
- Museu de ZoologiaUniversidade de São PauloSão PauloBrazil
- Instituto de BiologiaUniversidade Federal de UberlândiaUberlândiaBrazil
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93
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Pelster B, Val AL, Dallinger R. Recent advances in biology and physiology of tropical freshwater fish. JOURNAL OF EXPERIMENTAL ZOOLOGY PART 2021; 335:721-722. [PMID: 34661992 DOI: 10.1002/jez.2552] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Accepted: 10/04/2021] [Indexed: 11/07/2022]
Affiliation(s)
- Bernd Pelster
- Institute of Zoology, University of Innsbruck, Innsbruck, Austria
| | - Adalberto L Val
- Brazilian National Institute for Research of the Amazon, Manaus, Brazil
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94
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Corrêa F, Tuchtenhagen TS, Pouey J, Piedras SRN, Oliveira EFDE. Trophic ecology of Loricariichthys anus (Valenciennes, 1835), (Loricariidae: Loricariinae) in a subtropical reservoir, Rio Grande do Sul, Brazil. AN ACAD BRAS CIENC 2021; 93:e20200438. [PMID: 34644722 DOI: 10.1590/0001-3765202120200438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Accepted: 08/03/2020] [Indexed: 11/21/2022] Open
Affiliation(s)
- Fabiano Corrêa
- Programa de Pós-Graduação em Ecologia e Conservação, Universidade do Estado de Mato Grosso, Campus Nova Xavantina, Av. Dr. Renato Figueiro Varella, Caixa Postal 08, 78690-000 Nova Xavantina, MT, Brazil
| | - Thiago S Tuchtenhagen
- Universidade Federal de Pelotas, Laboratório de Ictiologia, Campus Capão do Leão, s/n, 96160-000 Capão do Leão, RS, Brazil
| | - Juvêncio Pouey
- Universidade Federal de Pelotas, Laboratório de Ictiologia, Campus Capão do Leão, s/n, 96160-000 Capão do Leão, RS, Brazil
| | - Sérgio R N Piedras
- Universidade Federal de Pelotas, Laboratório de Ictiologia, Campus Capão do Leão, s/n, 96160-000 Capão do Leão, RS, Brazil
| | - Edson F DE Oliveira
- Universidade Federal Tecnológica do Paraná, Laboratório de Ecologia Teórica e Aplicada, Campus Londrina, Avenida Pioneiros, Caixa Postal 3131, 86036-370 Londrina, PR, Brazil
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95
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Franceschini L, Aguiar A, Zago AC, de Oliveira Fadel Yamada P, Bertholdi Ebert M, da Silva RJ. Three new species of Creptotrema (Trematoda, Allocreadiidae) with an amended diagnosis of the genus and reassignment of Auriculostoma (Allocreadiidae), based on morphological and molecular evidence. ACTA ACUST UNITED AC 2021; 28:69. [PMID: 34643505 PMCID: PMC8513519 DOI: 10.1051/parasite/2021065] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Accepted: 09/19/2021] [Indexed: 11/16/2022]
Abstract
Diversity of Creptotrema was investigated using morphological and molecular tools, including data for Creptotrema creptotrema (type-species). Three new species, parasites of Brazilian fishes, are described: Creptotrema conconae n. sp. (type-host, Imparfinis mirini Haseman), Creptotrema schubarti n. sp. (type-host, Characidium schubarti Travassos) and Creptotrema megacetabularis n. sp. (type-host, Auchenipterus osteomystax (Miranda Ribeiro)). The diagnosis of the genus was amended to include new features. The new species differ from each other mainly in terms of body shape, relative sucker size, and testes position. DNA sequences were obtained from Creptotrema spp. from Brazil, including 28S, ITS and COI. Genetic divergences among the new species and C. creptotrema varied from 2.1 to 5.2% (21–49 bp) for 28S, and 6.6 to 16.4% (21–45 bp) for COI. Phylogenetic analysis (28S) placed the newly generated DNA sequences of Creptotrema in a clade (Creptotrema clade sensu stricto) composed of C. creptotrema, the new species described herein, and all species previously described as Auriculostoma, revealing that Auriculostoma is best interpreted as a synonym of Creptotrema based on the principle of priority of zoological nomenclature. Creptotrema funduli, the single sequence of the genus previously available, was not grouped within the Creptotrema clade sensu stricto, suggesting the need for reevaluation of the taxonomic status of this species. Our results showed that Creptotrema represents a monophyletic genus of trematodes widely distributed across the Americas, which currently comprises 19 valid species of parasites of teleosts and anurans.
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Affiliation(s)
- Lidiane Franceschini
- São Paulo State University (Unesp), Institute of Biosciences, Section of Parasitology, Rua Professor Doutor Antônio Celso Wagner Zanin, n° 250, Botucatu, São Paulo CEP 18618-689, Brazil
| | - Aline Aguiar
- São Paulo State University (Unesp), Institute of Biosciences, Department of Biodiversity, Avenida 24A, 1515, Bela Vista, Rio Claro, São Paulo CEP 13506-900, Brazil
| | - Aline Cristina Zago
- São Paulo State University (Unesp), Institute of Biosciences, Section of Parasitology, Rua Professor Doutor Antônio Celso Wagner Zanin, n° 250, Botucatu, São Paulo CEP 18618-689, Brazil
| | - Priscilla de Oliveira Fadel Yamada
- São Paulo State University (Unesp), Institute of Biosciences, Section of Parasitology, Rua Professor Doutor Antônio Celso Wagner Zanin, n° 250, Botucatu, São Paulo CEP 18618-689, Brazil
| | - Mariana Bertholdi Ebert
- São Paulo State University (Unesp), Institute of Biosciences, Section of Parasitology, Rua Professor Doutor Antônio Celso Wagner Zanin, n° 250, Botucatu, São Paulo CEP 18618-689, Brazil
| | - Reinaldo José da Silva
- São Paulo State University (Unesp), Institute of Biosciences, Section of Parasitology, Rua Professor Doutor Antônio Celso Wagner Zanin, n° 250, Botucatu, São Paulo CEP 18618-689, Brazil
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96
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da Silva DT, da Silva MF, Lima AM, Matos PS, de Carvalho Sanches O, Matos ER, Hamoy IG. Utrastructure and molecular phylogeny of the myxozoan Kudoa ocellatus n. sp. (Myxozoa: Kudoidae), a parasite of the Oscar, Astronotus ocellatus (Agassiz, 1831; Teleostei: Cichlidae), a fish from northern Brazil. Parasitol Int 2021; 86:102472. [PMID: 34597759 DOI: 10.1016/j.parint.2021.102472] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2020] [Revised: 09/23/2021] [Accepted: 09/23/2021] [Indexed: 11/25/2022]
Abstract
Kudoa ocellatus n. sp. was found in the musculature of Astronotus ocelattus (Agassiz, 1831) from the Arari River on Marajó Island in Pará, Brazil. The new species forms pseudocysts in the epaxial and hypaxial musculature composed of various spores that are pseudoquadrate in the apical view. In the lateral view, the spores were triangular or pyramidal. In the lateral view, the spores were 46 ± 0.11 μm (4.5-4.8) in length and 6.6 ± 0.3 μm (6.2-7.2) in width, with four pyriform polar capsules of equal size that measured 2.0 ± 0.16 μm (1.8-2.2) in length and 1.5 ± 0.18 μm (1.3-1.8) in width. Based on the partial (1418 bps) sequence of the SSU rDNA gene, Kudoa ocellatus n. sp. was distinct from all the other Kudoa species deposited in GenBank. The phylogenetic Bayesian Inference and P distance placed the new species together with the other Kudoa species that parasitize freshwater Amazonian fish. The morphological evidence, together with the SSU rDNA gene sequence, supported the description of Kudoa ocellatus n. sp., a distinct new species of the genus, which parasitizes a freshwater Amazonian cichlid.
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Affiliation(s)
- Diehgo Tuloza da Silva
- Postgraduate program in biology of infectious and parasitic agents (BAIP), Federal University of Pará (UFPa), Belém, PA, Brazil; Carlos Azevedo Research Laboratory, Federal Rural University of the Amazon (UFRA), Belém, PA, Brazil
| | - Marcelo Francisco da Silva
- Ecology and Limnology Laboratory - LEL, State University of Tocantina Region of Maranhão - UEMASUL, Imperatriz, MA, Brazil
| | | | - Patricia Santos Matos
- Postgraduate program in biology of infectious and parasitic agents (BAIP), Federal University of Pará (UFPa), Belém, PA, Brazil; Carlos Azevedo Research Laboratory, Federal Rural University of the Amazon (UFRA), Belém, PA, Brazil
| | - Osimar de Carvalho Sanches
- Graduate Program in Veterinary Medicine and Animal Wellbeing, Universidade Santo Amaro - UNISA, São Paulo, Brazil
| | - Edilson R Matos
- Carlos Azevedo Research Laboratory, Federal Rural University of the Amazon (UFRA), Belém, PA, Brazil.
| | - Igor G Hamoy
- Laboratory of applied genetics, Federal Rural University of Amazonia (UFRA), Belém, PA, Brazil
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97
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Aguirre WE, Alvarez‐Mieles G, Anaguano‐Yancha F, Burgos Morán R, Cucalón RV, Escobar‐Camacho D, Jácome‐Negrete I, Jiménez Prado P, Laaz E, Miranda‐Troya K, Navarrete‐Amaya R, Nugra Salazar F, Revelo W, Rivadeneira JF, Valdiviezo Rivera J, Zárate Hugo E. Conservation threats and future prospects for the freshwater fishes of Ecuador: A hotspot of Neotropical fish diversity. JOURNAL OF FISH BIOLOGY 2021; 99:1158-1189. [PMID: 34235726 PMCID: PMC8518725 DOI: 10.1111/jfb.14844] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2021] [Revised: 06/04/2021] [Accepted: 07/04/2021] [Indexed: 06/01/2023]
Abstract
Freshwater fish communities in Ecuador exhibit some of the highest levels of diversity and endemism in the Neotropics. Unfortunately, aquatic ecosystems in the country are under serious threat and conditions are deteriorating. In 2018-19, the government of Ecuador sponsored a series of workshops to examine the conservation status of Ecuador's freshwater fishes. Concerns were identified for 35 species, most of which are native to the Amazon region, and overfishing of Amazonian pimelodid catfishes emerged as a major issue. However, much of the information needed to make decisions across fish groups and regions was not available, hindering the process and highlighting the need for a review of the conservation threats to Ecuador's freshwater fishes. Here, we review how the physical alteration of rivers, deforestation, wetland and floodplain degradation, agricultural and urban water pollution, mining, oil extraction, dams, overfishing, introduced species and climate change are affecting freshwater fishes in Ecuador. Although many of these factors affect fishes throughout the Neotropics, the lack of data on Ecuadorian fish communities is staggering and highlights the urgent need for more research. We also make recommendations, including the need for proper enforcement of existing environmental laws, restoration of degraded aquatic ecosystems, establishment of a national monitoring system for freshwater ecosystems, investment in research to fill gaps in knowledge, and encouragement of public engagement in citizen science and conservation efforts. Freshwater fishes are an important component of the cultural and biological legacy of the Ecuadorian people. Conserving them for future generations is critical.
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Affiliation(s)
- Windsor E. Aguirre
- Department of Biological SciencesDePaul UniversityChicagoIllinoisUSA
- Instituto Nacional de BiodiversidadQuitoEcuador
- Field Museum of Natural HistoryChicagoIllinoisUSA
| | | | | | | | - Roberto V. Cucalón
- Department of Biological SciencesDePaul UniversityChicagoIllinoisUSA
- Present address:
Program in Ecology, Evolution, and Conservation BiologyUniversity of Illinois at Urbana‐ChampaignChampaignIllinoisUSA
| | | | - Iván Jácome‐Negrete
- Facultad de Ciencias Biológicas, Instituto de Estudios Amazónicos e InsularesUniversidad Central del EcuadorQuitoEcuador
| | - Pedro Jiménez Prado
- Pontificia Universidad Católica del Ecuador Sede EsmeraldasEsmeraldasEcuador
- Área de Ecología, Departamento de Ciencias Agrarias y del Medio Natural, Escuela Politécnica Superior de HuescaUniversidad de ZaragozaHuescaSpain
| | - Enrique Laaz
- Instituto Público de Investigación de Acuicultura y PescaGuayaquilEcuador
| | | | | | - Fredy Nugra Salazar
- ONG Bosque Medicinal, ONG Forest.inkGualaquizaEcuador
- Laboratorio de Limnología de la Universidad del AzuayCuencaEcuador
| | - Willan Revelo
- Unidad de Recursos Demersales Bentónicos de Agua Dulce y EmbalsesInstituto Público de Investigación de Acuicultura y PescaGuayaquilEcuador
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98
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Adding New Pieces to the Puzzle of Karyotype Evolution in Harttia (Siluriformes, Loricariidae): Investigation of Amazonian Species. BIOLOGY 2021; 10:biology10090922. [PMID: 34571799 PMCID: PMC8472603 DOI: 10.3390/biology10090922] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/25/2021] [Revised: 09/10/2021] [Accepted: 09/13/2021] [Indexed: 12/21/2022]
Abstract
A remarkable morphological diversity and karyotype variability can be observed in the Neotropical armored catfish genus Harttia. These fishes offer a useful model to explore both the evolution of karyotypes and sex chromosomes, since many species possess male-heterogametic sex chromosome systems and a high rate of karyotype repatterning. Based on the karyotype organization, the chromosomal distribution of several repetitive DNA classes, and the rough estimates of genomic divergences at the intraspecific and interspecific levels via Comparative Genomic Hybridization, we identified shared diploid chromosome numbers (2n = 54) but different karyotype compositions in H. dissidens (20m + 26sm + 8a) and Harttia sp. 3 (16m + 18sm + 14st + 6a), and different 2n in H. guianensis (2n = 58; 20m + 26sm + 2st + 10a). All species further displayed similar patterns of chromosomal distribution concerning constitutive heterochromatin, 18S ribosomal DNA (rDNA) sites, and most of the surveyed microsatellite motifs. Furthermore, differences in the distribution of 5S rDNA sites and a subset of microsatellite sequences were identified. Heteromorphic sex chromosomes were lacking in H. dissidens and H. guianensis at the scale of our analysis. However, one single chromosome pair in Harttia sp. 3 males presented a remarkable accumulation of male genome-derived probe after CGH, pointing to a tentative region of early sex chromosome differentiation. Thus, our data support already previously outlined evidence that Harttia is a vital model for the investigation of teleost karyotype and sex chromosome dynamics.
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99
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Kochhann D, Sarmento CG, de Oliveira JC, Queiroz HL, Val AL, Chapman LJ. Take time to look at the fish: Behavioral response to acute thermal challenge in two Amazonian cichlids. JOURNAL OF EXPERIMENTAL ZOOLOGY PART 2021; 335:735-744. [PMID: 34492166 DOI: 10.1002/jez.2541] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Revised: 08/21/2021] [Accepted: 08/24/2021] [Indexed: 11/11/2022]
Abstract
Critical thermal maximum (CTmax ) is often used as an index of upper thermal tolerance in fishes; however, recent studies have shown that some fishes exhibit agitation or avoidance behavior well before the CTmax is reached. In this study, we quantified behavioral changes during CTmax trials in two Amazonian cichlids, Apistogramma agassizii and Mesonauta insignis. The thermal agitation temperature (Tag ) was recorded as the temperature at which fish left cover and began swimming in an agitated manner, and four behaviors (duration of sheltering, digging, activity, and aquatic surface respiration [ASR]) were compared before and after Tag . Both A. agassizii and M. insignis exhibited high critical thermal maxima, 40.8°C and 41.3°C, respectively. Agitation temperature was higher in M. insignis (37.3°C) than in A. agassizii (35.4°C), indicating that A. agassizii has a lower temperature threshold at which avoidance behavior is initiated. Activity level increased and shelter use decreased with increased temperatures, and patterns were similar between the two species. Digging behavior increased after Tag in both species, but was higher in A. agassazii and may reflect its substrate-oriented ecology. ASR (ventilating water at the surface film) was extremely rare before Tag , but increased in both cichlid species after Tag and was greater in M. insignis than in A. agassizii. This suggests that fish were experiencing physiological hypoxia at water temperatures approaching CTmax . These results demonstrate that acute thermal challenge can induce a suite of behavioral changes in fishes that may provide additional, ecologically relevant information on thermal tolerance.
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Affiliation(s)
- Daiani Kochhann
- Laboratory of Behavioural Ecophysiology, Center of Agrarian and Biological Sciences, Acaraú Valley State University, Sobral, Ceará, Brazil
| | - Carolina G Sarmento
- Laboratory of Ecology and Fish Biology, Mamirauá Institute for Sustainable Development-MISD, Tefé, Brazil
| | - Jomara C de Oliveira
- Laboratory of Ecology and Fish Biology, Mamirauá Institute for Sustainable Development-MISD, Tefé, Brazil.,Amazonas State Secretary for Education and Teaching Quality, SEDUC Amazonas, Manaus, Brazil
| | - Helder L Queiroz
- Laboratory of Ecology and Fish Biology, Mamirauá Institute for Sustainable Development-MISD, Tefé, Brazil
| | - Adalberto L Val
- Laboratory of Ecophysiology and Molecular Evolution, Brazilian National Institute for Research of the Amazon-INPA, Manaus, Brazil
| | - Lauren J Chapman
- Department of Biology, McGill University, Montréal, Québec, Canada
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100
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Potential distribution of piscivores across the Atlantic Forest: From bats and marsupials to large-bodied mammals under a trophic-guild viewpoint. ECOL INFORM 2021. [DOI: 10.1016/j.ecoinf.2021.101357] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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