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For: Majdalani N, Cunning C, Sledjeski D, Elliott T, Gottesman S. DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription. Proc Natl Acad Sci U S A 1998;95:12462-7. [PMID: 9770508 PMCID: PMC22853 DOI: 10.1073/pnas.95.21.12462] [Citation(s) in RCA: 402] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
Number Cited by Other Article(s)
101
Dexter J, Armshaw P, Sheahan C, Pembroke JT. The state of autotrophic ethanol production in Cyanobacteria. J Appl Microbiol 2015;119:11-24. [PMID: 25865951 DOI: 10.1111/jam.12821] [Citation(s) in RCA: 67] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2014] [Revised: 02/23/2015] [Accepted: 04/07/2015] [Indexed: 12/20/2022]
102
Sudo N, Soma A, Muto A, Iyoda S, Suh M, Kurihara N, Abe H, Tobe T, Ogura Y, Hayashi T, Kurokawa K, Ohnishi M, Sekine Y. A novel small regulatory RNA enhances cell motility in enterohemorrhagic Escherichia coli. J GEN APPL MICROBIOL 2015;60:44-50. [PMID: 24646762 DOI: 10.2323/jgam.60.44] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
103
A 3′ External Transcribed Spacer in a tRNA Transcript Acts as a Sponge for Small RNAs to Prevent Transcriptional Noise. Mol Cell 2015;58:393-405. [DOI: 10.1016/j.molcel.2015.03.013] [Citation(s) in RCA: 119] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2014] [Revised: 02/13/2015] [Accepted: 03/09/2015] [Indexed: 10/23/2022]
104
Papenfort K, Vanderpool CK. Target activation by regulatory RNAs in bacteria. FEMS Microbiol Rev 2015;39:362-78. [PMID: 25934124 DOI: 10.1093/femsre/fuv016] [Citation(s) in RCA: 160] [Impact Index Per Article: 17.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/10/2015] [Indexed: 12/15/2022]  Open
105
A stress-induced small RNA modulates alpha-rhizobial cell cycle progression. PLoS Genet 2015;11:e1005153. [PMID: 25923724 PMCID: PMC4414408 DOI: 10.1371/journal.pgen.1005153] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2014] [Accepted: 03/18/2015] [Indexed: 01/22/2023]  Open
106
Locus of enterocyte effacement: a pathogenicity island involved in the virulence of enteropathogenic and enterohemorragic Escherichia coli subjected to a complex network of gene regulation. BIOMED RESEARCH INTERNATIONAL 2015;2015:534738. [PMID: 25710006 PMCID: PMC4332760 DOI: 10.1155/2015/534738] [Citation(s) in RCA: 81] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/05/2014] [Accepted: 11/03/2014] [Indexed: 12/18/2022]
107
Feng L, Rutherford ST, Papenfort K, Bagert JD, van Kessel JC, Tirrell DA, Wingreen NS, Bassler BL. A qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics. Cell 2015;160:228-40. [PMID: 25579683 DOI: 10.1016/j.cell.2014.11.051] [Citation(s) in RCA: 111] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2014] [Revised: 09/20/2014] [Accepted: 11/14/2014] [Indexed: 12/18/2022]
108
Multiple approaches for the investigation of bacterial small regulatory RNAs self-assembly. Methods Mol Biol 2015;1297:21-42. [PMID: 25895993 DOI: 10.1007/978-1-4939-2562-9_2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
109
Tsai CH, Liao R, Chou B, Palumbo M, Contreras LM. Genome-wide analyses in bacteria show small-RNA enrichment for long and conserved intergenic regions. J Bacteriol 2015;197:40-50. [PMID: 25313390 PMCID: PMC4288687 DOI: 10.1128/jb.02359-14] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2014] [Accepted: 10/02/2014] [Indexed: 12/21/2022]  Open
110
Small RNAs in Bacteria and Archaea. ADVANCES IN GENETICS 2015;90:133-208. [DOI: 10.1016/bs.adgen.2015.05.001] [Citation(s) in RCA: 371] [Impact Index Per Article: 41.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
111
Findeiß S, Wachsmuth M, Mörl M, Stadler PF. Design of transcription regulating riboswitches. Methods Enzymol 2014;550:1-22. [PMID: 25605378 DOI: 10.1016/bs.mie.2014.10.029] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
112
Structural model of an mRNA in complex with the bacterial chaperone Hfq. Proc Natl Acad Sci U S A 2014;111:17134-9. [PMID: 25404287 DOI: 10.1073/pnas.1410114111] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
113
Möller P, Overlöper A, Förstner KU, Wen TN, Sharma CM, Lai EM, Narberhaus F. Profound impact of Hfq on nutrient acquisition, metabolism and motility in the plant pathogen Agrobacterium tumefaciens. PLoS One 2014;9:e110427. [PMID: 25330313 PMCID: PMC4201532 DOI: 10.1371/journal.pone.0110427] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2014] [Accepted: 09/14/2014] [Indexed: 01/18/2023]  Open
114
Lavi-Itzkovitz A, Peterman N, Jost D, Levine E. Quantitative effect of target translation on small RNA efficacy reveals a novel mode of interaction. Nucleic Acids Res 2014;42:12200-11. [PMID: 25294829 PMCID: PMC4231754 DOI: 10.1093/nar/gku889] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
115
Caillet J, Gracia C, Fontaine F, Hajnsdorf E. Clostridium difficile Hfq can replace Escherichia coli Hfq for most of its function. RNA (NEW YORK, N.Y.) 2014;20:1567-1578. [PMID: 25147238 PMCID: PMC4174439 DOI: 10.1261/rna.043372.113] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/12/2013] [Accepted: 05/31/2014] [Indexed: 06/03/2023]
116
Peterman N, Lavi-Itzkovitz A, Levine E. Large-scale mapping of sequence-function relations in small regulatory RNAs reveals plasticity and modularity. Nucleic Acids Res 2014;42:12177-88. [PMID: 25262352 PMCID: PMC4231740 DOI: 10.1093/nar/gku863] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
117
Peer A, Margalit H. Evolutionary patterns of Escherichia coli small RNAs and their regulatory interactions. RNA (NEW YORK, N.Y.) 2014;20:994-1003. [PMID: 24865611 PMCID: PMC4114697 DOI: 10.1261/rna.043133.113] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2013] [Accepted: 03/23/2014] [Indexed: 06/03/2023]
118
Mika F, Hengge R. Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coli. RNA Biol 2014;11:494-507. [PMID: 25028968 PMCID: PMC4152358 DOI: 10.4161/rna.28867] [Citation(s) in RCA: 106] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
119
Saramago M, Bárria C, Dos Santos RF, Silva IJ, Pobre V, Domingues S, Andrade JM, Viegas SC, Arraiano CM. The role of RNases in the regulation of small RNAs. Curr Opin Microbiol 2014;18:105-15. [PMID: 24704578 DOI: 10.1016/j.mib.2014.02.009] [Citation(s) in RCA: 83] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2014] [Revised: 02/19/2014] [Accepted: 02/20/2014] [Indexed: 12/20/2022]
120
Dulebohn DP, Hayes BM, Rosa PA. Global repression of host-associated genes of the Lyme disease spirochete through post-transcriptional modulation of the alternative sigma factor RpoS. PLoS One 2014;9:e93141. [PMID: 24671196 PMCID: PMC3966842 DOI: 10.1371/journal.pone.0093141] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2013] [Accepted: 02/28/2014] [Indexed: 11/18/2022]  Open
121
Sakai Y, Abe K, Nakashima S, Yoshida W, Ferri S, Sode K, Ikebukuro K. Improving the gene-regulation ability of small RNAs by scaffold engineering in Escherichia coli. ACS Synth Biol 2014;3:152-62. [PMID: 24328142 DOI: 10.1021/sb4000959] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
122
Aiso T, Kamiya S, Yonezawa H, Gamou S. Overexpression of an antisense RNA, ArrS, increases the acid resistance of Escherichia coli. MICROBIOLOGY-SGM 2014;160:954-961. [PMID: 24600026 DOI: 10.1099/mic.0.075994-0] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
123
α-fur, an antisense RNA gene to fur in the extreme acidophile Acidithiobacillus ferrooxidans. Microbiology (Reading) 2014;160:514-524. [DOI: 10.1099/mic.0.073171-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
124
Genome-wide analysis of small RNAs expressed by Yersinia pestis identifies a regulator of the Yop-Ysc type III secretion system. J Bacteriol 2014;196:1659-70. [PMID: 24532772 DOI: 10.1128/jb.01456-13] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]  Open
125
Kang Z, Zhang C, Zhang J, Jin P, Zhang J, Du G, Chen J. Small RNA regulators in bacteria: powerful tools for metabolic engineering and synthetic biology. Appl Microbiol Biotechnol 2014;98:3413-24. [DOI: 10.1007/s00253-014-5569-y] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2013] [Revised: 01/22/2014] [Accepted: 01/23/2014] [Indexed: 12/17/2022]
126
Peng Y, Soper TJ, Woodson SA. Positional effects of AAN motifs in rpoS regulation by sRNAs and Hfq. J Mol Biol 2014;426:275-85. [PMID: 24051417 PMCID: PMC3947347 DOI: 10.1016/j.jmb.2013.08.026] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2013] [Revised: 08/21/2013] [Accepted: 08/23/2013] [Indexed: 12/23/2022]
127
Ke X, Miller LC, Ng WL, Bassler BL. CqsA-CqsS quorum-sensing signal-receptor specificity in Photobacterium angustum. Mol Microbiol 2014;91:821-33. [PMID: 24372841 DOI: 10.1111/mmi.12502] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/19/2013] [Indexed: 01/14/2023]
128
Bak G, Han K, Kim D, Lee Y. Roles of rpoS-activating small RNAs in pathways leading to acid resistance of Escherichia coli. Microbiologyopen 2013;3:15-28. [PMID: 24319011 PMCID: PMC3937726 DOI: 10.1002/mbo3.143] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2013] [Revised: 10/24/2013] [Accepted: 10/28/2013] [Indexed: 11/07/2022]  Open
129
The MiaA tRNA modification enzyme is necessary for robust RpoS expression in Escherichia coli. J Bacteriol 2013;196:754-61. [PMID: 24296670 DOI: 10.1128/jb.01013-13] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]  Open
130
Arbel-Goren R, Tal A, Stavans J. Phenotypic noise: effects of post-transcriptional regulatory processes affecting mRNA. WILEY INTERDISCIPLINARY REVIEWS-RNA 2013;5:197-207. [PMID: 24259395 DOI: 10.1002/wrna.1209] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2013] [Revised: 10/28/2013] [Accepted: 10/29/2013] [Indexed: 11/10/2022]
131
Hämmerle H, Večerek B, Resch A, Bläsi U. Duplex formation between the sRNA DsrA and rpoS mRNA is not sufficient for efficient RpoS synthesis at low temperature. RNA Biol 2013;10:1834-41. [PMID: 24448230 DOI: 10.4161/rna.27100] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
132
Yonekura K, Watanabe M, Kageyama Y, Hirata K, Yamamoto M, Maki-Yonekura S. Post-transcriptional regulator Hfq binds catalase HPII: crystal structure of the complex. PLoS One 2013;8:e78216. [PMID: 24223139 PMCID: PMC3819363 DOI: 10.1371/journal.pone.0078216] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2013] [Accepted: 09/18/2013] [Indexed: 12/12/2022]  Open
133
Chappell J, Takahashi MK, Meyer S, Loughrey D, Watters KE, Lucks J. The centrality of RNA for engineering gene expression. Biotechnol J 2013;8:1379-95. [PMID: 24124015 PMCID: PMC4033574 DOI: 10.1002/biot.201300018] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2013] [Revised: 07/19/2013] [Accepted: 08/15/2013] [Indexed: 12/25/2022]
134
Gaida SM, Al-Hinai MA, Indurthi DC, Nicolaou SA, Papoutsakis ET. Synthetic tolerance: three noncoding small RNAs, DsrA, ArcZ and RprA, acting supra-additively against acid stress. Nucleic Acids Res 2013;41:8726-37. [PMID: 23892399 PMCID: PMC3794604 DOI: 10.1093/nar/gkt651] [Citation(s) in RCA: 86] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2013] [Revised: 06/30/2013] [Accepted: 07/02/2013] [Indexed: 12/31/2022]  Open
135
Bowden SD, Eyres A, Chung JCS, Monson RE, Thompson A, Salmond GPC, Spring DR, Welch M. Virulence in Pectobacterium atrosepticum is regulated by a coincidence circuit involving quorum sensing and the stress alarmone, (p)ppGpp. Mol Microbiol 2013;90:457-71. [PMID: 23957692 DOI: 10.1111/mmi.12369] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/15/2013] [Indexed: 12/19/2022]
136
Schmidtke C, Abendroth U, Brock J, Serrania J, Becker A, Bonas U. Small RNA sX13: a multifaceted regulator of virulence in the plant pathogen Xanthomonas. PLoS Pathog 2013;9:e1003626. [PMID: 24068933 PMCID: PMC3771888 DOI: 10.1371/journal.ppat.1003626] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2013] [Accepted: 08/01/2013] [Indexed: 01/12/2023]  Open
137
Bobrovskyy M, Vanderpool CK. Regulation of bacterial metabolism by small RNAs using diverse mechanisms. Annu Rev Genet 2013;47:209-32. [PMID: 24016191 DOI: 10.1146/annurev-genet-111212-133445] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
138
Henderson CA, Vincent HA, Casamento A, Stone CM, Phillips JO, Cary PD, Sobott F, Gowers DM, Taylor JE, Callaghan AJ. Hfq binding changes the structure of Escherichia coli small noncoding RNAs OxyS and RprA, which are involved in the riboregulation of rpoS. RNA (NEW YORK, N.Y.) 2013;19:1089-104. [PMID: 23804244 PMCID: PMC3708529 DOI: 10.1261/rna.034595.112] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/28/2012] [Accepted: 05/15/2013] [Indexed: 05/26/2023]
139
Zhao X, Koestler BJ, Waters CM, Hammer BK. Post-transcriptional activation of a diguanylate cyclase by quorum sensing small RNAs promotes biofilm formation in Vibrio cholerae. Mol Microbiol 2013;89:989-1002. [PMID: 23841714 DOI: 10.1111/mmi.12325] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/08/2013] [Indexed: 12/28/2022]
140
Jin Y, Wu J, Li Y, Cai Z, Huang JD. Modification of the RpoS network with a synthetic small RNA. Nucleic Acids Res 2013;41:8332-40. [PMID: 23842672 PMCID: PMC3783183 DOI: 10.1093/nar/gkt604] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
141
The Vibrio parahaemolyticus small RNA RyhB promotes production of the siderophore vibrioferrin by stabilizing the polycistronic mRNA. J Bacteriol 2013;195:3692-703. [PMID: 23772063 DOI: 10.1128/jb.00162-13] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
142
Panja S, Schu DJ, Woodson SA. Conserved arginines on the rim of Hfq catalyze base pair formation and exchange. Nucleic Acids Res 2013;41:7536-46. [PMID: 23771143 PMCID: PMC3753642 DOI: 10.1093/nar/gkt521] [Citation(s) in RCA: 92] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
143
Faner MA, Feig AL. Identifying and characterizing Hfq-RNA interactions. Methods 2013;63:144-59. [PMID: 23707622 DOI: 10.1016/j.ymeth.2013.04.023] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2013] [Revised: 04/24/2013] [Accepted: 04/25/2013] [Indexed: 11/15/2022]  Open
144
Wang W, Wang L, Wu J, Gong Q, Shi Y. Hfq-bridged ternary complex is important for translation activation of rpoS by DsrA. Nucleic Acids Res 2013;41:5938-48. [PMID: 23605038 PMCID: PMC3675490 DOI: 10.1093/nar/gkt276] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
145
Mika F, Hengge R. Small Regulatory RNAs in the Control of Motility and Biofilm Formation in E. coli and Salmonella. Int J Mol Sci 2013;14:4560-79. [PMID: 23443158 PMCID: PMC3634460 DOI: 10.3390/ijms14034560] [Citation(s) in RCA: 109] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2013] [Revised: 02/10/2013] [Accepted: 02/16/2013] [Indexed: 11/16/2022]  Open
146
Expanding control in bacteria: interplay between small RNAs and transcriptional regulators to control gene expression. Curr Opin Microbiol 2013;16:125-32. [PMID: 23415757 DOI: 10.1016/j.mib.2012.12.005] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2012] [Revised: 12/21/2012] [Accepted: 12/29/2012] [Indexed: 11/20/2022]
147
Brennan CM, Keane ML, Hunt TM, Goulet MT, Mazzucca NQ, Sexton Z, Mezoian T, Douglas KE, Osborn JM, Pellock BJ. Shewanella oneidensis Hfq promotes exponential phase growth, stationary phase culture density, and cell survival. BMC Microbiol 2013;13:33. [PMID: 23394078 PMCID: PMC3575234 DOI: 10.1186/1471-2180-13-33] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2012] [Accepted: 01/21/2013] [Indexed: 02/03/2023]  Open
148
Escherichia coli noncoding RNAs can affect gene expression and physiology of Caenorhabditis elegans. Nat Commun 2013;3:1073. [PMID: 23011127 PMCID: PMC3658002 DOI: 10.1038/ncomms2071] [Citation(s) in RCA: 107] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2012] [Accepted: 08/16/2012] [Indexed: 12/26/2022]  Open
149
New insights into small RNA-dependent translational regulation in prokaryotes. Trends Genet 2013;29:92-8. [DOI: 10.1016/j.tig.2012.10.004] [Citation(s) in RCA: 83] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2012] [Revised: 09/14/2012] [Accepted: 10/04/2012] [Indexed: 12/16/2022]
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Van Puyvelde S, Steenackers HP, Vanderleyden J. Small RNAs regulating biofilm formation and outer membrane homeostasis. RNA Biol 2013;10:185-91. [PMID: 23324602 DOI: 10.4161/rna.23341] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]  Open
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