1901
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Affiliation(s)
- Tomas Kron
- Peter MacCallum Cancer Centre, Melbourne, Australia.
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1902
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Shi F, Wang J, Shi J, Wu Z, Wang Q, Tang Z, He K, Shi Y, Shen D. Review of Artificial Intelligence Techniques in Imaging Data Acquisition, Segmentation, and Diagnosis for COVID-19. IEEE Rev Biomed Eng 2021; 14:4-15. [PMID: 32305937 DOI: 10.1109/rbme.2020.2987975] [Citation(s) in RCA: 488] [Impact Index Per Article: 162.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
The pandemic of coronavirus disease 2019 (COVID-19) is spreading all over the world. Medical imaging such as X-ray and computed tomography (CT) plays an essential role in the global fight against COVID-19, whereas the recently emerging artificial intelligence (AI) technologies further strengthen the power of the imaging tools and help medical specialists. We hereby review the rapid responses in the community of medical imaging (empowered by AI) toward COVID-19. For example, AI-empowered image acquisition can significantly help automate the scanning procedure and also reshape the workflow with minimal contact to patients, providing the best protection to the imaging technicians. Also, AI can improve work efficiency by accurate delineation of infections in X-ray and CT images, facilitating subsequent quantification. Moreover, the computer-aided platforms help radiologists make clinical decisions, i.e., for disease diagnosis, tracking, and prognosis. In this review paper, we thus cover the entire pipeline of medical imaging and analysis techniques involved with COVID-19, including image acquisition, segmentation, diagnosis, and follow-up. We particularly focus on the integration of AI with X-ray and CT, both of which are widely used in the frontline hospitals, in order to depict the latest progress of medical imaging and radiology fighting against COVID-19.
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1903
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Muramatsu S. [2. Topics in Bow-tie Filter]. Nihon Hoshasen Gijutsu Gakkai Zasshi 2021; 77:75-80. [PMID: 33473082 DOI: 10.6009/jjrt.2021_jsrt_77.1.75] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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1904
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Hu Y, Ding H, Shi Y, Zhang H, Zheng Q. A predictive model for cortical bone temperature distribution during drilling. Phys Eng Sci Med 2021; 44:147-156. [PMID: 33459995 DOI: 10.1007/s13246-020-00962-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Accepted: 12/15/2020] [Indexed: 02/06/2023]
Abstract
Bone drilling is an important procedure in medical orthopedic surgery and it is inevitable that heat will be generated during the drilling process and higher temperatures can cause thermal damage to the bone tissue near the drilled hole. Therefore, the capability to obtain the cortical bone drilling temperature distribution area can have great significance for medical bone surgery. Based on the theory of heat transfer, a predictive model for cortical bone drilling temperature distribution was established. The energy distribution coefficient in cortical bone drilling was derived, based on conjugate gradient inversion. A cortical bone drilling experiment platform was built to verify the temperature distribution prediction model. The results show that the model of cortical bone drill temperature distribution could predict accurately the drilling temperature distribution, both for different depths and for different radial distances. Additionally, the effects of different drilling conditions (spindle speed, feed rate, drill diameter) on the temperature of drilling cortical bone were considered.
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Affiliation(s)
- Yahui Hu
- Tianjin Key Laboratory for Advanced Mechatronic System Design and Intelligent Control, School of Mechanical Engineering, National Demonstration Center for Experimental Mechanical and Electrical Engineering Education (Tianjin University of Technology), Tianjin, 300384, China
| | - Hao Ding
- Tianjin Key Laboratory for Advanced Mechatronic System Design and Intelligent Control, School of Mechanical Engineering, National Demonstration Center for Experimental Mechanical and Electrical Engineering Education (Tianjin University of Technology), Tianjin, 300384, China
| | - Yutao Shi
- Tianjin Key Laboratory for Advanced Mechatronic System Design and Intelligent Control, School of Mechanical Engineering, National Demonstration Center for Experimental Mechanical and Electrical Engineering Education (Tianjin University of Technology), Tianjin, 300384, China
| | - Huaiyu Zhang
- Tianjin Key Laboratory for Advanced Mechatronic System Design and Intelligent Control, School of Mechanical Engineering, National Demonstration Center for Experimental Mechanical and Electrical Engineering Education (Tianjin University of Technology), Tianjin, 300384, China
| | - Qingchun Zheng
- Tianjin Key Laboratory for Advanced Mechatronic System Design and Intelligent Control, School of Mechanical Engineering, National Demonstration Center for Experimental Mechanical and Electrical Engineering Education (Tianjin University of Technology), Tianjin, 300384, China.
- Tianjin Key Laboratory for Advanced Mechatronic System Design and Intelligent Control, Tianjin University of Technology, Tianjin, 300384, China.
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1905
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AIRSENSE-TO-ACT: A Concept Paper for COVID-19 Countermeasures Based on Artificial Intelligence Algorithms and Multi-Source Data Processing. ISPRS INTERNATIONAL JOURNAL OF GEO-INFORMATION 2021. [DOI: 10.3390/ijgi10010034] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The aim of this concept paper is the description of a new tool to support institutions in the implementation of targeted countermeasures, based on quantitative and multi-scale elements, for the fight and prevention of emergencies, such as the current COVID-19 pandemic. The tool is a cloud-based centralized system; a multi-user platform that relies on artificial intelligence (AI) algorithms for the processing of heterogeneous data, which can produce as an output the level of risk. The model includes a specific neural network which is first trained to learn the correlations between selected inputs, related to the case of interest: environmental variables (chemical–physical, such as meteorological), human activity (such as traffic and crowding), level of pollution (in particular the concentration of particulate matter) and epidemiological variables related to the evolution of the contagion. The tool realized in the first phase of the project will serve later both as a decision support system (DSS) with predictive capacity, when fed by the actual measured data, and as a simulation bench performing the tuning of certain input values, to identify which of them led to a decrease in the degree of risk. In this way, we aimed to design different scenarios to compare different restrictive strategies and the actual expected benefits, to adopt measures sized to the actual needs, adapted to the specific areas of analysis and useful for safeguarding human health; and we compared the economic and social impacts of the choices. Although ours is a concept paper, some preliminary analyses have been shown, and two different case studies are presented, whose results have highlighted a correlation between NO2, mobility and COVID-19 data. However, given the complexity of the virus diffusion mechanism, linked to air pollutants but also to many other factors, these preliminary studies confirmed the need, on the one hand, to carry out more in-depth analyses, and on the other, to use AI algorithms to capture the hidden relationships among the huge amounts of data to process.
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1906
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Hong GS, Do KH, Son AY, Jo KW, Kim KP, Yun J, Lee CW. Value of bone suppression software in chest radiographs for improving image quality and reducing radiation dose. Eur Radiol 2021; 31:5160-5171. [PMID: 33439320 DOI: 10.1007/s00330-020-07596-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2020] [Revised: 11/07/2020] [Accepted: 12/03/2020] [Indexed: 11/24/2022]
Abstract
OBJECTIVES To compare image quality and radiation dose between dual-energy subtraction (DES)-based bone suppression images (D-BSIs) and software-based bone suppression images (S-BSIs). METHODS Chest radiographs (CXRs) of forty adult patients were obtained with the two X-ray devices, one with DES and one with bone suppression software. Three image quality metrics (relative mean absolute error (RMAE), peak signal-to-noise ratio (PSNR), and structural similarity index (SSIM)) between original CXR and BSI for each of D-BSI and S-SBI groups were calculated for each bone and soft tissue areas. Two readers rated the visual image quality for original CXR and BSI for each of D-BSI and S-SBI groups. The dose area product (DAP) values were recorded. Paired t test was used to compare the image quality and DAP values between D-BSI and S-BSI groups. RESULTS In bone areas, S-BSIs had better SSIM values than D-BSI (94.57 vs. 87.77) but worse RMAE and PSNR values (0.50 vs. 0.20; 20.93 vs. 34.37) (all p < 0.001). In soft tissue areas, S-BSIs had better SSIM values than D-BSI (97.56 vs. 91.42) but similar RMAE and PSNR values (0.29 vs. 0.27; 31.35 vs. 29.87) (all p < 0.001). Both readers gave S-BSIs significantly higher image quality scores than D-BSI (p < 0.001). The mean DAP in software-related images (0.98 dGy·cm2) was significantly lower than that in the DES-related images (1.48 dGy·cm2) (p < 0.001). CONCLUSION Bone suppression software significantly improved the image quality of bone suppression images with a relatively lower radiation dose, compared with dual-energy subtraction technique. KEY POINTS • Bone suppression software preserves structure similarity of soft tissues better than dual-energy subtraction technique in bone suppression images. • Bone suppression software achieves superior image quality for lung lesions than dual-energy subtraction technique in bone suppression images. • Bone suppression software can decrease the radiation dose over the hardware-based image processing technique.
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Affiliation(s)
- Gil-Sun Hong
- Department of Radiology and Research Institute of Radiology, Asan Medical Center, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul, 05505, South Korea
| | - Kyung-Hyun Do
- Department of Radiology and Research Institute of Radiology, Asan Medical Center, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul, 05505, South Korea.
| | - A-Yeon Son
- Department of Radiology and Research Institute of Radiology, Asan Medical Center, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul, 05505, South Korea
| | - Kyung-Wook Jo
- Division of Pulmonary and Critical Care Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea
| | - Kwang Pyo Kim
- Department of Nuclear Engineering, Kyung Hee University, Seoul, South Korea
| | - Jihye Yun
- Department of Radiology and Research Institute of Radiology, Asan Medical Center, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul, 05505, South Korea
| | - Choong Wook Lee
- Department of Radiology and Research Institute of Radiology, Asan Medical Center, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul, 05505, South Korea
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1907
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Singh K, Malhotra J. Cloud based ensemble machine learning approach for smart detection of epileptic seizures using higher order spectral analysis. Phys Eng Sci Med 2021; 44:313-324. [PMID: 33433860 DOI: 10.1007/s13246-021-00970-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2020] [Accepted: 11/24/2020] [Indexed: 11/24/2022]
Abstract
The present paper proposes a smart framework for detection of epileptic seizures using the concepts of IoT technologies, cloud computing and machine learning. This framework processes the acquired scalp EEG signals by Fast Walsh Hadamard transform. Then, the transformed frequency-domain signals are examined using higher-order spectral analysis to extract amplitude and entropy-based statistical features. The extracted features have been selected by means of correlation-based feature selection algorithm to achieve more real-time classification with reduced complexity and delay. Finally, the samples containing selected features have been fed to ensemble machine learning techniques for classification into several classes of EEG states, viz. normal, interictal and ictal. The employed techniques include Dagging, Bagging, Stacking, MultiBoost AB and AdaBoost M1 algorithms in integration with C4.5 decision tree algorithm as the base classifier. The results of the ensemble techniques are also compared with standalone C4.5 decision tree and SVM algorithms. The performance analysis through simulation results reveals that the ensemble of AdaBoost M1 and C4.5 decision tree algorithms with higher-order spectral features is an adequate technique for automated detection of epileptic seizures in real-time. This technique achieves 100% classification accuracy, sensitivity and specificity values with optimally small classification time.
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Affiliation(s)
- Kuldeep Singh
- Department of Electronics Technology, Guru Nanak Dev University, Amritsar, Punjab, India.
| | - Jyoteesh Malhotra
- Department of Engineering & Technology, Guru Nanak Dev University Regional Campus, Jalandhar, Punjab, India
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1908
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Syeda HB, Syed M, Sexton KW, Syed S, Begum S, Syed F, Prior F, Yu F. Role of Machine Learning Techniques to Tackle the COVID-19 Crisis: Systematic Review. JMIR Med Inform 2021; 9:e23811. [PMID: 33326405 PMCID: PMC7806275 DOI: 10.2196/23811] [Citation(s) in RCA: 65] [Impact Index Per Article: 21.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Revised: 10/27/2020] [Accepted: 11/15/2020] [Indexed: 12/15/2022] Open
Abstract
BACKGROUND SARS-CoV-2, the novel coronavirus responsible for COVID-19, has caused havoc worldwide, with patients presenting a spectrum of complications that have pushed health care experts to explore new technological solutions and treatment plans. Artificial Intelligence (AI)-based technologies have played a substantial role in solving complex problems, and several organizations have been swift to adopt and customize these technologies in response to the challenges posed by the COVID-19 pandemic. OBJECTIVE The objective of this study was to conduct a systematic review of the literature on the role of AI as a comprehensive and decisive technology to fight the COVID-19 crisis in the fields of epidemiology, diagnosis, and disease progression. METHODS A systematic search of PubMed, Web of Science, and CINAHL databases was performed according to PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analysis) guidelines to identify all potentially relevant studies published and made available online between December 1, 2019, and June 27, 2020. The search syntax was built using keywords specific to COVID-19 and AI. RESULTS The search strategy resulted in 419 articles published and made available online during the aforementioned period. Of these, 130 publications were selected for further analyses. These publications were classified into 3 themes based on AI applications employed to combat the COVID-19 crisis: Computational Epidemiology, Early Detection and Diagnosis, and Disease Progression. Of the 130 studies, 71 (54.6%) focused on predicting the COVID-19 outbreak, the impact of containment policies, and potential drug discoveries, which were classified under the Computational Epidemiology theme. Next, 40 of 130 (30.8%) studies that applied AI techniques to detect COVID-19 by using patients' radiological images or laboratory test results were classified under the Early Detection and Diagnosis theme. Finally, 19 of the 130 studies (14.6%) that focused on predicting disease progression, outcomes (ie, recovery and mortality), length of hospital stay, and number of days spent in the intensive care unit for patients with COVID-19 were classified under the Disease Progression theme. CONCLUSIONS In this systematic review, we assembled studies in the current COVID-19 literature that utilized AI-based methods to provide insights into different COVID-19 themes. Our findings highlight important variables, data types, and available COVID-19 resources that can assist in facilitating clinical and translational research.
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Affiliation(s)
- Hafsa Bareen Syeda
- Department of Neurology, University of Arkansas for Medical Sciences, Little Rock, AR, United States
| | - Mahanazuddin Syed
- Department of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, AR, United States
| | - Kevin Wayne Sexton
- Department of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, AR, United States
- Department of Surgery, University of Arkansas for Medical Sciences, Little Rock, AR, United States
- Department of Health Policy and Management, University of Arkansas for Medical Sciences, Little Rock, AR, United States
| | - Shorabuddin Syed
- Department of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, AR, United States
| | - Salma Begum
- Department of Information Technology, University of Arkansas for Medical Sciences, Little Rock, AR, United States
| | - Farhanuddin Syed
- College of Medicine, Shadan Institute of Medical Sciences, Hyderabad, India
| | - Fred Prior
- Department of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, AR, United States
- Department of Radiology, University of Arkansas for Medical Sciences, Little Rock, AR, United States
| | - Feliciano Yu
- Department of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, AR, United States
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1909
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Alshazly H, Linse C, Barth E, Martinetz T. Explainable COVID-19 Detection Using Chest CT Scans and Deep Learning. SENSORS (BASEL, SWITZERLAND) 2021; 21:E455. [PMID: 33440674 PMCID: PMC7828058 DOI: 10.3390/s21020455] [Citation(s) in RCA: 80] [Impact Index Per Article: 26.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Revised: 12/28/2020] [Accepted: 01/08/2021] [Indexed: 02/08/2023]
Abstract
This paper explores how well deep learning models trained on chest CT images can diagnose COVID-19 infected people in a fast and automated process. To this end, we adopted advanced deep network architectures and proposed a transfer learning strategy using custom-sized input tailored for each deep architecture to achieve the best performance. We conducted extensive sets of experiments on two CT image datasets, namely, the SARS-CoV-2 CT-scan and the COVID19-CT. The results show superior performances for our models compared with previous studies. Our best models achieved average accuracy, precision, sensitivity, specificity, and F1-score values of 99.4%, 99.6%, 99.8%, 99.6%, and 99.4% on the SARS-CoV-2 dataset, and 92.9%, 91.3%, 93.7%, 92.2%, and 92.5% on the COVID19-CT dataset, respectively. For better interpretability of the results, we applied visualization techniques to provide visual explanations for the models' predictions. Feature visualizations of the learned features show well-separated clusters representing CT images of COVID-19 and non-COVID-19 cases. Moreover, the visualizations indicate that our models are not only capable of identifying COVID-19 cases but also provide accurate localization of the COVID-19-associated regions, as indicated by well-trained radiologists.
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Affiliation(s)
- Hammam Alshazly
- Institute for Neuro- and Bioinformatics, University of Lübeck, 23562 Lübeck, Germany; (C.L.); (E.B.); (T.M.)
- Mathematics Department, Faculty of Science, South Valley University, Qena 83523, Egypt
| | - Christoph Linse
- Institute for Neuro- and Bioinformatics, University of Lübeck, 23562 Lübeck, Germany; (C.L.); (E.B.); (T.M.)
| | - Erhardt Barth
- Institute for Neuro- and Bioinformatics, University of Lübeck, 23562 Lübeck, Germany; (C.L.); (E.B.); (T.M.)
| | - Thomas Martinetz
- Institute for Neuro- and Bioinformatics, University of Lübeck, 23562 Lübeck, Germany; (C.L.); (E.B.); (T.M.)
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1910
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Awal MA, Masud M, Hossain MS, Bulbul AAM, Mahmud SMH, Bairagi AK. A Novel Bayesian Optimization-Based Machine Learning Framework for COVID-19 Detection From Inpatient Facility Data. IEEE ACCESS : PRACTICAL INNOVATIONS, OPEN SOLUTIONS 2021; 9:10263-10281. [PMID: 34786301 PMCID: PMC8545233 DOI: 10.1109/access.2021.3050852] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Accepted: 01/05/2021] [Indexed: 05/04/2023]
Abstract
The whole world faces a pandemic situation due to the deadly virus, namely COVID-19. It takes considerable time to get the virus well-matured to be traced, and during this time, it may be transmitted among other people. To get rid of this unexpected situation, quick identification of COVID-19 patients is required. We have designed and optimized a machine learning-based framework using inpatient's facility data that will give a user-friendly, cost-effective, and time-efficient solution to this pandemic. The proposed framework uses Bayesian optimization to optimize the hyperparameters of the classifier and ADAptive SYNthetic (ADASYN) algorithm to balance the COVID and non-COVID classes of the dataset. Although the proposed technique has been applied to nine state-of-the-art classifiers to show the efficacy, it can be used to many classifiers and classification problems. It is evident from this study that eXtreme Gradient Boosting (XGB) provides the highest Kappa index of 97.00%. Compared to without ADASYN, our proposed approach yields an improvement in the kappa index of 96.94%. Besides, Bayesian optimization has been compared to grid search, random search to show efficiency. Furthermore, the most dominating features have been identified using SHapely Adaptive exPlanations (SHAP) analysis. A comparison has also been made among other related works. The proposed method is capable enough of tracing COVID patients spending less time than that of the conventional techniques. Finally, two potential applications, namely, clinically operable decision tree and decision support system, have been demonstrated to support clinical staff and build a recommender system.
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Affiliation(s)
- Md. Abdul Awal
- Electronics and Communication Engineering DisciplineKhulna UniversityKhulna9208Bangladesh
| | - Mehedi Masud
- Department of Computer ScienceCollege of Computers and Information TechnologyTaif UniversityTaif21944Saudi Arabia
| | - Md. Shahadat Hossain
- Department of Quantitative SciencesInternational University of Business Agriculture and TechnologyDhaka1230Bangladesh
| | | | - S. M. Hasan Mahmud
- School of Computer Science and EngineeringUniversity of Electronic Science and Technology of ChinaChengdu611731China
| | - Anupam Kumar Bairagi
- Computer Science and Engineering DisciplineKhulna UniversityKhulna9208Bangladesh
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1911
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Chen YH, Sawan M. Trends and Challenges of Wearable Multimodal Technologies for Stroke Risk Prediction. SENSORS (BASEL, SWITZERLAND) 2021; 21:E460. [PMID: 33440697 PMCID: PMC7827415 DOI: 10.3390/s21020460] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/14/2020] [Revised: 01/04/2021] [Accepted: 01/05/2021] [Indexed: 02/07/2023]
Abstract
We review in this paper the wearable-based technologies intended for real-time monitoring of stroke-related physiological parameters. These measurements are undertaken to prevent death and disability due to stroke. We compare the various characteristics, such as weight, accessibility, frequency of use, data continuity, and response time of these wearables. It was found that the most user-friendly wearables can have limitations in reporting high-precision prediction outcomes. Therefore, we report also the trend of integrating these wearables into the internet of things (IoT) and combining electronic health records (EHRs) and machine learning (ML) algorithms to establish a stroke risk prediction system. Due to different characteristics, such as accessibility, time, and spatial resolution of various wearable-based technologies, strategies of applying different types of wearables to maximize the efficacy of stroke risk prediction are also reported. In addition, based on the various applications of multimodal electroencephalography-functional near-infrared spectroscopy (EEG-fNIRS) on stroke patients, the perspective of using this technique to improve the prediction performance is elaborated. Expected prediction has to be dynamically delivered with high-precision outcomes. There is a need for stroke risk stratification and management to reduce the resulting social and economic burden.
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Affiliation(s)
- Yun-Hsuan Chen
- CenBRAIN Lab., School of Engineering, Westlake University, Hangzhou 310024, China
- Institute of Advanced Study, Westlake Institute for Advanced Study, Hangzhou 310024, China
| | - Mohamad Sawan
- CenBRAIN Lab., School of Engineering, Westlake University, Hangzhou 310024, China
- Institute of Advanced Study, Westlake Institute for Advanced Study, Hangzhou 310024, China
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1912
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Chan J, Auffermann W, Jenkins P, Streitmatter S, Duong PA. Implementing a Novel Through-Glass Chest Radiography Technique for COVID-19 Patients: Image Quality, Radiation Dose Optimization, and Practical Considerations. Curr Probl Diagn Radiol 2021; 51:38-45. [PMID: 33446334 PMCID: PMC7794604 DOI: 10.1067/j.cpradiol.2020.12.003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Revised: 12/04/2020] [Accepted: 12/31/2020] [Indexed: 12/24/2022]
Abstract
RATIONALE AND OBJECTIVES The novel coronavirus (COVID-19) pandemic has presented many logistical challenges, including unprecedented shortages of personal protective equipment (PPE). A technique of obtaining portable chest radiographs (pCXR) through glass doors or windows to minimize technologist-patient contact and conserve PPE has gained popularity, but remains incompletely evaluated in the literature. Our goal was to quickly implement this technique and evaluate image quality and radiation dose. MATERIALS AND METHODS An infographic and video were developed to educate nurses and technologists on the through-glass pCXR technique. Imaging parameters were optimized using a phantom and scatter radiation was measured. Three reviewers independently evaluated 100 conventionally obtained and 100 through-glass pCXRs from March 13, 2020 to April 30, 2020 on patients with suspected COVID-19, using criteria for positioning and sharpness/contrast on a 1 (confident criteria not met) to 5 (confident criteria met) scale. Imaging parameters, including deviation index (DI) were recorded for all radiographs. RESULTS The through-glass method was rapidly adopted and conserved one isolation gown per interaction. Although there was a statistically significant difference in the positioning (P value 0.018) and sharpness/contrast (P value 0.016), the difference in mean ratings was small: 4.82 vs 4.65 for positioning and 4.67 vs 4.50 (conventional vs modified) for sharpness/contrast. Scatter radiation was measured using a thorax phantom and found to be acceptable for the patient and nearby personnel. Standard deviation was higher for the DI for the through-glass technique (2.8) compared to the conventional technique (1.8), although the means were similar. CONCLUSION The through-glass technique was quickly implemented, producing diagnostic quality chest radiographs while conserving PPE and reducing risks to radiology staff. There was more variability with imaging technique and DI using the through-glass technique, likely due to technologist uncertainty regarding technical modifications. Further work to reduce this variation is necessary to optimize quality and dose.
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Affiliation(s)
- Jessica Chan
- University of Utah School of Medicine, Department of Radiology and Imaging Sciences, Salt Lake City, UT
| | - William Auffermann
- University of Utah School of Medicine, Department of Radiology and Imaging Sciences, Salt Lake City, UT
| | | | | | - Phuong-Anh Duong
- University of Utah School of Medicine, Department of Radiology and Imaging Sciences, Salt Lake City, UT.
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1913
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Singh RK, Pandey R, Babu RN. COVIDScreen: explainable deep learning framework for differential diagnosis of COVID-19 using chest X-rays. Neural Comput Appl 2021; 33:8871-8892. [PMID: 33437132 PMCID: PMC7791540 DOI: 10.1007/s00521-020-05636-6] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Accepted: 12/15/2020] [Indexed: 12/24/2022]
Abstract
COVID-19 has emerged as a global crisis with unprecedented socio-economic challenges, jeopardizing our lives and livelihoods for years to come. The unavailability of vaccines for COVID-19 has rendered rapid testing of the population instrumental in order to contain the exponential rise in cases of infection. Shortage of RT-PCR test kits and delays in obtaining test results calls for alternative methods of rapid and reliable diagnosis. In this article, we propose a novel deep learning-based solution using chest X-rays which can help in rapid triaging of COVID-19 patients. The proposed solution uses image enhancement, image segmentation, and employs a modified stacked ensemble model consisting of four CNN base-learners along with Naive Bayes as meta-learner to classify chest X-rays into three classes viz. COVID-19, pneumonia, and normal. An effective pruning strategy as introduced in the proposed framework results in increased model performance, generalizability, and decreased model complexity. We incorporate explainability in our article by using Grad-CAM visualization in order to establish trust in the medical AI system. Furthermore, we evaluate multiple state-of-the-art GAN architectures and their ability to generate realistic synthetic samples of COVID-19 chest X-rays to deal with limited numbers of training samples. The proposed solution significantly outperforms existing methods, with 98.67% accuracy, 0.98 Kappa score, and F-1 scores of 100, 98, and 98 for COVID-19, normal, and pneumonia classes, respectively, on standard datasets. The proposed solution can be used as one element of patient evaluation along with gold-standard clinical and laboratory testing.
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Affiliation(s)
| | - Rohan Pandey
- Shiv Nadar University, NCR, Gautam Budh Nagar, India
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1914
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An Accuracy vs. Complexity Comparison of Deep Learning Architectures for the Detection of COVID-19 Disease. COMPUTATION 2021. [DOI: 10.3390/computation9010003] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
In parallel with the vast medical research on clinical treatment of COVID-19, an important action to have the disease completely under control is to carefully monitor the patients. What the detection of COVID-19 relies on most is the viral tests, however, the study of X-rays is helpful due to the ease of availability. There are various studies that employ Deep Learning (DL) paradigms, aiming at reinforcing the radiography-based recognition of lung infection by COVID-19. In this regard, we make a comparison of the noteworthy approaches devoted to the binary classification of infected images by using DL techniques, then we also propose a variant of a convolutional neural network (CNN) with optimized parameters, which performs very well on a recent dataset of COVID-19. The proposed model’s effectiveness is demonstrated to be of considerable importance due to its uncomplicated design, in contrast to other presented models. In our approach, we randomly put several images of the utilized dataset aside as a hold out set; the model detects most of the COVID-19 X-rays correctly, with an excellent overall accuracy of 99.8%. In addition, the significance of the results obtained by testing different datasets of diverse characteristics (which, more specifically, are not used in the training process) demonstrates the effectiveness of the proposed approach in terms of an accuracy up to 93%.
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1915
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Radiomic analysis of HTR-DCE MR sequences improves diagnostic performance compared to BI-RADS analysis of breast MR lesions. Eur Radiol 2021; 31:4848-4859. [PMID: 33404696 DOI: 10.1007/s00330-020-07519-9] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2020] [Revised: 09/27/2020] [Accepted: 11/13/2020] [Indexed: 10/22/2022]
Abstract
PURPOSE To assess the diagnostic performance of radiomic analysis using high temporal resolution (HTR)-dynamic contrast enhancement (DCE) MR sequences compared to BI-RADS analysis to distinguish benign from malignant breast lesions. MATERIALS AND METHODS We retrospectively analyzed data from consecutive women who underwent breast MRI including HTR-DCE MR sequencing for abnormal enhancing lesions and who had subsequent pathological analysis at our tertiary center. Semi-quantitative enhancement parameters and textural features were extracted. Temporal change across each phase of textural features in HTR-DCE MR sequences was calculated and called "kinetic textural parameters." Statistical analysis by LASSO logistic regression and cross validation was performed to build a model. The diagnostic performance of the radiomic model was compared to the results of BI-RADS MR score analysis. RESULTS We included 117 women with a mean age of 54 years (28-88). Of the 174 lesions analyzed, 75 were benign and 99 malignant. Seven semi-quantitative enhancement parameters and 57 textural features were extracted. Regression analysis selected 15 significant variables in a radiomic model (called "malignant probability score") which displayed an AUC = 0.876 (sensitivity = 0.98, specificity = 0.52, accuracy = 0.78). The performance of the malignant probability score to distinguish benign from malignant breast lesions (AUC = 0.876, 95%CI 0.825-0.925) was significantly better than that of BI-RADS analysis (AUC = 0.831, 95%CI 0.769-0.892). The radiomic model significantly reduced false positives (42%) with the same number of missed cancers (n = 2). CONCLUSION A radiomic model including kinetic textural features extracted from an HTR-DCE MR sequence improves diagnostic performance over BI-RADS analysis. KEY POINTS • Radiomic analysis using HTR-DCE is of better diagnostic performance (AUC = 0.876) than conventional breast MRI reading with BI-RADS (AUC = 0.831) (p < 0.001). • A radiomic malignant probability score under 19.5% gives a negative predictive value of 100% while a malignant probability score over 81% gives a positive predictive value of 100%. • Kinetic textural features extracted from HTR-DCE-MRI have a major role to play in distinguishing benign from malignant breast lesions.
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1916
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Keles A, Keles MB, Keles A. COV19-CNNet and COV19-ResNet: Diagnostic Inference Engines for Early Detection of COVID-19. Cognit Comput 2021:1-11. [PMID: 33425046 PMCID: PMC7785922 DOI: 10.1007/s12559-020-09795-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2020] [Accepted: 11/16/2020] [Indexed: 12/23/2022]
Abstract
Chest CT is used in the COVID-19 diagnosis process as a significant complement to the reverse transcription polymerase chain reaction (RT-PCR) technique. However, it has several drawbacks, including long disinfection and ventilation times, excessive radiation effects, and high costs. While X-ray radiography is more useful for detecting COVID-19, it is insensitive to the early stages of the disease. We have developed inference engines that will turn X-ray machines into powerful diagnostic tools by using deep learning technology to detect COVID-19. We named these engines COV19-CNNet and COV19-ResNet. The former is based on convolutional neural network architecture; the latter is on residual neural network (ResNet) architecture. This research is a retrospective study. The database consists of 210 COVID-19, 350 viral pneumonia, and 350 normal (healthy) chest X-ray (CXR) images that were created using two different data sources. This study was focused on the problem of multi-class classification (COVID-19, viral pneumonia, and normal), which is a rather difficult task for the diagnosis of COVID-19. The classification accuracy levels for COV19-ResNet and COV19-CNNet were 97.61% and 94.28%, respectively. The inference engines were developed from scratch using new and special deep neural networks without pre-trained models, unlike other studies in the field. These powerful diagnostic engines allow for the early detection of COVID-19 as well as distinguish it from viral pneumonia with similar radiological appearances. Thus, they can help in fast recovery at the early stages, prevent the COVID-19 outbreak from spreading, and contribute to reducing pressure on health-care systems worldwide.
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Affiliation(s)
- Ayturk Keles
- Department of Computer Education and Instructional Technology, Faculty of Education, Agri Ibrahim Cecen University, 04100 Agri, Turkey
| | - Mustafa Berk Keles
- Department of Software Engineering, Faculty of Engineering, Istanbul Aydin University, 34295 Istanbul, Turkey
| | - Ali Keles
- Department of Computer Education and Instructional Technology, Faculty of Education, Agri Ibrahim Cecen University, 04100 Agri, Turkey
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1917
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Inception single shot multi-box detector with affinity propagation clustering and their application in multi-class vehicle counting. APPL INTELL 2021. [DOI: 10.1007/s10489-020-02127-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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1918
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Ahmad F, Farooq A, Ghani MU. Deep Ensemble Model for Classification of Novel Coronavirus in Chest X-Ray Images. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2021; 2021:8890226. [PMID: 33488691 PMCID: PMC7805527 DOI: 10.1155/2021/8890226] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Revised: 11/22/2020] [Accepted: 12/04/2020] [Indexed: 12/15/2022]
Abstract
The novel coronavirus, SARS-CoV-2, can be deadly to people, causing COVID-19. The ease of its propagation, coupled with its high capacity for illness and death in infected individuals, makes it a hazard to the community. Chest X-rays are one of the most common but most difficult to interpret radiographic examination for early diagnosis of coronavirus-related infections. They carry a considerable amount of anatomical and physiological information, but it is sometimes difficult even for the expert radiologist to derive the related information they contain. Automatic classification using deep learning models can help in better assessing these infections swiftly. Deep CNN models, namely, MobileNet, ResNet50, and InceptionV3, were applied with different variations, including training the model from the start, fine-tuning along with adjusting learned weights of all layers, and fine-tuning with learned weights along with augmentation. Fine-tuning with augmentation produced the best results in pretrained models. Out of these, two best-performing models (MobileNet and InceptionV3) selected for ensemble learning produced accuracy and FScore of 95.18% and 90.34%, and 95.75% and 91.47%, respectively. The proposed hybrid ensemble model generated with the merger of these deep models produced a classification accuracy and FScore of 96.49% and 92.97%. For test dataset, which was separately kept, the model generated accuracy and FScore of 94.19% and 88.64%. Automatic classification using deep ensemble learning can help radiologists in the correct identification of coronavirus-related infections in chest X-rays. Consequently, this swift and computer-aided diagnosis can help in saving precious human lives and minimizing the social and economic impact on society.
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Affiliation(s)
- Fareed Ahmad
- Department of Computer Science, University of Engineering and Technology, Lahore 54890, Pakistan
- Quality Operations Laboratory, Institute of Microbiology, University of Veterinary and Animal Sciences, Lahore, Pakistan
| | - Amjad Farooq
- Department of Computer Science, University of Engineering and Technology, Lahore 54890, Pakistan
| | - Muhammad Usman Ghani
- Department of Computer Science, University of Engineering and Technology, Lahore 54890, Pakistan
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1919
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Ibrahim AU, Ozsoz M, Serte S, Al-Turjman F, Yakoi PS. Pneumonia Classification Using Deep Learning from Chest X-ray Images During COVID-19. Cognit Comput 2021:1-13. [PMID: 33425044 PMCID: PMC7781428 DOI: 10.1007/s12559-020-09787-5] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Accepted: 10/21/2020] [Indexed: 12/15/2022]
Abstract
The outbreak of the novel corona virus disease (COVID-19) in December 2019 has led to global crisis around the world. The disease was declared pandemic by World Health Organization (WHO) on 11th of March 2020. Currently, the outbreak has affected more than 200 countries with more than 37 million confirmed cases and more than 1 million death tolls as of 10 October 2020. Reverse-transcription polymerase chain reaction (RT-PCR) is the standard method for detection of COVID-19 disease, but it has many challenges such as false positives, low sensitivity, expensive, and requires experts to conduct the test. As the number of cases continue to grow, there is a high need for developing a rapid screening method that is accurate, fast, and cheap. Chest X-ray (CXR) scan images can be considered as an alternative or a confirmatory approach as they are fast to obtain and easily accessible. Though the literature reports a number of approaches to classify CXR images and detect the COVID-19 infections, the majority of these approaches can only recognize two classes (e.g., COVID-19 vs. normal). However, there is a need for well-developed models that can classify a wider range of CXR images belonging to the COVID-19 class itself such as the bacterial pneumonia, the non-COVID-19 viral pneumonia, and the normal CXR scans. The current work proposes the use of a deep learning approach based on pretrained AlexNet model for the classification of COVID-19, non-COVID-19 viral pneumonia, bacterial pneumonia, and normal CXR scans obtained from different public databases. The model was trained to perform two-way classification (i.e., COVID-19 vs. normal, bacterial pneumonia vs. normal, non-COVID-19 viral pneumonia vs. normal, and COVID-19 vs. bacterial pneumonia), three-way classification (i.e., COVID-19 vs. bacterial pneumonia vs. normal), and four-way classification (i.e., COVID-19 vs. bacterial pneumonia vs. non-COVID-19 viral pneumonia vs. normal). For non-COVID-19 viral pneumonia and normal (healthy) CXR images, the proposed model achieved 94.43% accuracy, 98.19% sensitivity, and 95.78% specificity. For bacterial pneumonia and normal CXR images, the model achieved 91.43% accuracy, 91.94% sensitivity, and 100% specificity. For COVID-19 pneumonia and normal CXR images, the model achieved 99.16% accuracy, 97.44% sensitivity, and 100% specificity. For classification CXR images of COVID-19 pneumonia and non-COVID-19 viral pneumonia, the model achieved 99.62% accuracy, 90.63% sensitivity, and 99.89% specificity. For the three-way classification, the model achieved 94.00% accuracy, 91.30% sensitivity, and 84.78%. Finally, for the four-way classification, the model achieved an accuracy of 93.42%, sensitivity of 89.18%, and specificity of 98.92%.
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Affiliation(s)
| | - Mehmet Ozsoz
- Department of Biomedical Engineering, Near East University, Nicosia, Mersin 10, Turkey
| | - Sertan Serte
- Department of Electrical Engineering, Near East University, Nicosia, Mersin 10, Turkey
| | - Fadi Al-Turjman
- Department of Artificial Intelligence, Research Center for AI and IoT, Near East University, Nicosia, Mersin 10, Turkey
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1920
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Shastri S, Singh K, Kumar S, Kour P, Mansotra V. Deep-LSTM ensemble framework to forecast Covid-19: an insight to the global pandemic. ACTA ACUST UNITED AC 2021; 13:1291-1301. [PMID: 33426425 PMCID: PMC7779101 DOI: 10.1007/s41870-020-00571-0] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Accepted: 11/12/2020] [Indexed: 12/16/2022]
Abstract
The pandemic of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) is spreading all over the world. Medical health care systems are in urgent need to diagnose this pandemic with the support of new emerging technologies like artificial intelligence (AI), internet of things (IoT) and Big Data System. In this dichotomy study, we divide our research in two ways—firstly, the review of literature is carried out on databases of Elsevier, Google Scholar, Scopus, PubMed and Wiley Online using keywords Coronavirus, Covid-19, artificial intelligence on Covid-19, Coronavirus 2019 and collected the latest information about Covid-19. Possible applications are identified from the same to enhance the future research. We have found various databases, websites and dashboards working on real time extraction of Covid-19 data. This will be conducive for future research to easily locate the available information. Secondly, we designed a nested ensemble model using deep learning methods based on long short term memory (LSTM). Proposed Deep-LSTM ensemble model is evaluated on intensive care Covid-19 confirmed and death cases of India with different classification metrics such as accuracy, precision, recall, f-measure and mean absolute percentage error. Medical healthcare facilities are boosted with the intervention of AI as it can mimic human intelligence. Contactless treatment is possible only with the help of AI assisted automated health care systems. Furthermore, remote location self treatment is one of the key benefits provided by AI based systems.
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Affiliation(s)
- Sourabh Shastri
- Department of Computer Science and IT, University of Jammu, Jammu, Jammu and Kashmir 180006 India
| | - Kuljeet Singh
- Department of Computer Science and IT, University of Jammu, Jammu, Jammu and Kashmir 180006 India
| | - Sachin Kumar
- Department of Computer Science and IT, University of Jammu, Jammu, Jammu and Kashmir 180006 India
| | - Paramjit Kour
- Department of Computer Science and IT, University of Jammu, Jammu, Jammu and Kashmir 180006 India
| | - Vibhakar Mansotra
- Department of Computer Science and IT, University of Jammu, Jammu, Jammu and Kashmir 180006 India
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1921
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A machine learning-based framework for diagnosis of COVID-19 from chest X-ray images. Interdiscip Sci 2021; 13:103-117. [PMID: 33387306 PMCID: PMC7776293 DOI: 10.1007/s12539-020-00403-6] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2020] [Revised: 11/05/2020] [Accepted: 11/20/2020] [Indexed: 02/06/2023]
Abstract
Corona virus disease (COVID-19) acknowledged as a pandemic by the WHO and mankind all over the world is vulnerable to this virus. Alternative tools are needed that can help in diagnosis of the coronavirus. Researchers of this article investigated the potential of machine learning methods for automatic diagnosis of corona virus with high accuracy from X-ray images. Two most commonly used classifiers were selected: logistic regression (LR) and convolutional neural networks (CNN). The main reason was to make the system fast and efficient. Moreover, a dimensionality reduction approach was also investigated based on principal component analysis (PCA) to further speed up the learning process and improve the classification accuracy by selecting the highly discriminate features. The deep learning-based methods demand large amount of training samples compared to conventional approaches, yet adequate amount of labelled training samples was not available for COVID-19 X-ray images. Therefore, data augmentation technique using generative adversarial network (GAN) was employed to further increase the training samples and reduce the overfitting problem. We used the online available dataset and incorporated GAN to have 500 X-ray images in total for this study. Both CNN and LR showed encouraging results for COVID-19 patient identification. The LR and CNN models showed 95.2-97.6% overall accuracy without PCA and 97.6-100% with PCA for positive cases identification, respectively.
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1922
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Le DN, Parvathy VS, Gupta D, Khanna A, Rodrigues JJPC, Shankar K. IoT enabled depthwise separable convolution neural network with deep support vector machine for COVID-19 diagnosis and classification. INT J MACH LEARN CYB 2021; 12:3235-3248. [PMID: 33727984 PMCID: PMC7778504 DOI: 10.1007/s13042-020-01248-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2020] [Accepted: 11/20/2020] [Indexed: 01/08/2023]
Abstract
At present times, the drastic advancements in the 5G cellular and internet of things (IoT) technologies find useful in different applications of the healthcare sector. At the same time, COVID-19 is commonly spread from animals to persons, but today it is transmitting among persons by adapting the structure. It is a severe virus and inappropriately resulted in a global pandemic. Radiologists utilize X-ray or computed tomography (CT) images to diagnose COVID-19 disease. It is essential to identify and classify the disease through the use of image processing techniques. So, a new intelligent disease diagnosis model is in need to identify the COVID-19. In this view, this paper presents a novel IoT enabled Depthwise separable convolution neural network (DWS-CNN) with Deep support vector machine (DSVM) for COVID-19 diagnosis and classification. The proposed DWS-CNN model aims to detect both binary and multiple classes of COVID-19 by incorporating a set of processes namely data acquisition, Gaussian filtering (GF) based preprocessing, feature extraction, and classification. Initially, patient data will be collected in the data acquisition stage using IoT devices and sent to the cloud server. Besides, the GF technique is applied to remove the existence of noise that exists in the image. Then, the DWS-CNN model is employed for replacing default convolution for automatic feature extraction. Finally, the DSVM model is applied to determine the binary and multiple class labels of COVID-19. The diagnostic outcome of the DWS-CNN model is tested against Chest X-ray (CXR) image dataset and the results are investigated interms of distinct performance measures. The experimental results ensured the superior results of the DWS-CNN model by attaining maximum classification performance with the accuracy of 98.54% and 99.06% on binary and multiclass respectively.
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Affiliation(s)
- Dac-Nhuong Le
- Institute of Research and Development, Duy Tan University, Danang, 550000 Vietnam.,Faculty of Information Technology, Duy Tan University, Danang, 550000 Vietnam
| | - Velmurugan Subbiah Parvathy
- Department of Electronics and Communication Engineering, Kalasalingam Academy of Research and Education, Krishnankovil, India
| | - Deepak Gupta
- Department of Computer Science and Engineering, Maharaja Agrasen Institute of Technology, Rohini, Delhi India
| | - Ashish Khanna
- Department of Computer Science and Engineering, Maharaja Agrasen Institute of Technology, Rohini, Delhi India
| | - Joel J P C Rodrigues
- Federal University of Piauí, Teresina, 64049-550 Brazil.,Instituto de Telecomunicações, 1049-001 Lisbon, Portugal
| | - K Shankar
- Department of Computer Applications, Alagappa University, Karaikudi, India
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1923
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Murugan R, Goel T. E-DiCoNet: Extreme learning machine based classifier for diagnosis of COVID-19 using deep convolutional network. JOURNAL OF AMBIENT INTELLIGENCE AND HUMANIZED COMPUTING 2021; 12:8887-8898. [PMID: 33425051 PMCID: PMC7778490 DOI: 10.1007/s12652-020-02688-3] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/26/2020] [Accepted: 11/08/2020] [Indexed: 06/12/2023]
Abstract
The novel coronavirus disease (COVID-19) spread quickly worldwide, changing the everyday lives of billions of individuals. The preliminary diagnosis of COVID-19 empowers health experts and government professionals to break the chain of change and level the epidemic curve. The regular sort of COVID-19 detection test, be that as it may, requires specific hardware and generally has low sensitivity. Chest X-ray images to be used to diagnosis the COVID-19. In this work, a dataset of X-ray images with COVID-19, bacterial pneumonia, and normal was used to diagnose the COVID-19 automatically. This work to assess the execution of best in class Convolutional Neural Network (CNN) models proposed over ongoing years for clinical image classification. In particular, the modified pre-trained CNN-ResNet50 based Extreme Learning Machine classifier (ELM) has proposed for different diagnosis abnormalities such as COVID-19, Pneumonia, and normal. The proposed CNN method has trained and tested with the publicly available COVID-19, pneumonia, and normal datasets. The presented pre-trained ResNet CNN model provides accuracy, sensitivity, specificity, recall, precision, and F1 score values of 94.07, 98.15, 91.48, 85.21, 98.15, and 91.22, respectively, which is the best classification performance than other states of the art methods. This study introduced a computationally productive and exceptionally exact model for multi-class grouping of three diverse contamination types from alongside Normal people. This CNN model can help in the automatic diagnosis of COVID-19 cases and help decrease the burden on medicinal services frameworks.
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Affiliation(s)
- R. Murugan
- Department of Electronics and Communication Engineering, National Institute of Technology Silchar, Assam, 788010 India
| | - Tripti Goel
- Department of Electronics and Communication Engineering, National Institute of Technology Silchar, Assam, 788010 India
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1924
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Kamal R, Thaper D, Kumar R, Singh G, Yadav HP, Oinam AS, Kumar V, Sharma H. Dosimetric impact of contrast-enhanced 4d computed tomography for stereotactic body radiation therapy of hepatocelluar carcinoma. Rep Pract Oncol Radiother 2021; 26:598-604. [PMID: 34434576 PMCID: PMC8382070 DOI: 10.5603/rpor.a2021.0075] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Accepted: 02/27/2021] [Indexed: 05/08/2023] Open
Abstract
BACKGROUND A purpose of the study was to investigate the dosimetric impact of contrast media on dose calculation using average 4D contrast-enhanced computed tomography (4D-CECT) and delayed 4D-CT (d4D-CT) images caused by CT simulation contrast agents for stereotactic body radiation therapy (SBRT) of liver cases. MATERIALS AND METHODS Fifteen patients of liver SBRT treated using the volumetric modulated arc therapy (VMAT) technique were selected retrospectively. 4D-CECT, and d4D-CT were acquired with the Anzai gating system and GE CT. For all patients, gross target volume (GTV) was contoured on the ten phases after rigid registration of both the contrast and delayed scans and merged to generate internal target volume (ITV) on average CT images. Region of interest (ROI) was drawn on contrast images and then copied to the delayed images after rigid registration of two average CT datasets. The treatment plans were generated for contrast enhanced average CT, delayed average CT and contrast enhanced average CT with electron density of the heart overridden. RESULTS No significant dosimetric difference was observed in plans parameters (mean HU value of the liver, total monitor units, total control points, degree of modulation and average segment area) except mean HU value of the aorta amongst the three arms. All the OARs were evaluated and resulted in statistically insignificant variation (p > 0.05) using one way ANOVA analysis. CONCLUSIONS Contrast enhanced 4D-CT is advantageous in accurate delineation of tumors and assessing accurate ITV. The treatment plans generated on average 4D-CECT and average d4D-CT have a clinically insignificant effect on dosimetric parameters.
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Affiliation(s)
- Rose Kamal
- Centre for Medical Physics, Panjab University, Chandigarh, India
- Department of Radiation Oncology, Institute of Liver and Biliary Sciences, New Delhi, India
| | - Deepak Thaper
- Centre for Medical Physics, Panjab University, Chandigarh, India
- Department of Radiation Oncology, Institute of Liver and Biliary Sciences, New Delhi, India
| | - Rishabh Kumar
- Centre for Medical Physics, Panjab University, Chandigarh, India
| | - Gaganpreet Singh
- Centre for Medical Physics, Panjab University, Chandigarh, India
- Department of Radiotherapy, Post Graduate Institute of Medical Education and Research, Regional Cancer Centre, Chandigarh, India
| | - Hanuman P. Yadav
- Department of Radiation Oncology, Institute of Liver and Biliary Sciences, New Delhi, India
| | - Arun S. Oinam
- Department of Radiotherapy, Post Graduate Institute of Medical Education and Research, Regional Cancer Centre, Chandigarh, India
| | - Vivek Kumar
- Centre for Medical Physics, Panjab University, Chandigarh, India
| | - Hitesh Sharma
- Govt. Cancer Hospital, NSCB Medical College, Jabalpur, Madhya Pradesh, India
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1925
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Predicting the required thickness of custom shielding materials in kilovoltage radiotherapy beams. Phys Med 2021; 81:94-101. [DOI: 10.1016/j.ejmp.2020.12.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Revised: 12/07/2020] [Accepted: 12/08/2020] [Indexed: 12/15/2022] Open
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1926
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Ahsan MM, Ahad MT, Soma FA, Paul S, Chowdhury A, Luna SA, Yazdan MMS, Rahman A, Siddique Z, Huebner P. Detecting SARS-CoV-2 From Chest X-Ray Using Artificial Intelligence. IEEE ACCESS : PRACTICAL INNOVATIONS, OPEN SOLUTIONS 2021; 9:35501-35513. [PMID: 34976572 PMCID: PMC8675556 DOI: 10.1109/access.2021.3061621] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2021] [Accepted: 02/16/2021] [Indexed: 05/19/2023]
Abstract
Chest radiographs (X-rays) combined with Deep Convolutional Neural Network (CNN) methods have been demonstrated to detect and diagnose the onset of COVID-19, the disease caused by the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). However, questions remain regarding the accuracy of those methods as they are often challenged by limited datasets, performance legitimacy on imbalanced data, and have their results typically reported without proper confidence intervals. Considering the opportunity to address these issues, in this study, we propose and test six modified deep learning models, including VGG16, InceptionResNetV2, ResNet50, MobileNetV2, ResNet101, and VGG19 to detect SARS-CoV-2 infection from chest X-ray images. Results are evaluated in terms of accuracy, precision, recall, and f- score using a small and balanced dataset (Study One), and a larger and imbalanced dataset (Study Two). With 95% confidence interval, VGG16 and MobileNetV2 show that, on both datasets, the model could identify patients with COVID-19 symptoms with an accuracy of up to 100%. We also present a pilot test of VGG16 models on a multi-class dataset, showing promising results by achieving 91% accuracy in detecting COVID-19, normal, and Pneumonia patients. Furthermore, we demonstrated that poorly performing models in Study One (ResNet50 and ResNet101) had their accuracy rise from 70% to 93% once trained with the comparatively larger dataset of Study Two. Still, models like InceptionResNetV2 and VGG19's demonstrated an accuracy of 97% on both datasets, which posits the effectiveness of our proposed methods, ultimately presenting a reasonable and accessible alternative to identify patients with COVID-19.
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Affiliation(s)
- Md Manjurul Ahsan
- School of Industrial and Systems EngineeringThe University of Oklahoma Norman OK 73019 USA
| | - Md Tanvir Ahad
- School of Aerospace and Mechanical EngineeringThe University of Oklahoma Norman OK 73019 USA
| | - Farzana Akter Soma
- Holy Family Red Crescent Medical College & Hospital Dhaka 1000 Bangladesh
| | - Shuva Paul
- School of Electrical and Computer EngineeringGeorgia Institute of Technology Atlanta GA 30332 USA
| | - Ananna Chowdhury
- Z. H. Sikder Women's Medical College & Hospital Dhaka 1212 Bangladesh
| | | | | | - Akhlaqur Rahman
- School of Industrial Automation and Electrical EngineeringEngineering Institute of Technology Melbourne VIC 3000 Australia
| | - Zahed Siddique
- School of Aerospace and Mechanical EngineeringThe University of Oklahoma Norman OK 73019 USA
| | - Pedro Huebner
- School of Industrial and Systems EngineeringThe University of Oklahoma Norman OK 73019 USA
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1927
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Catala ODT, Igual IS, Perez-Benito FJ, Escriva DM, Castello VO, Llobet R, Perez-Cortes JC. Bias Analysis on Public X-Ray Image Datasets of Pneumonia and COVID-19 Patients. IEEE ACCESS : PRACTICAL INNOVATIONS, OPEN SOLUTIONS 2021; 9:42370-42383. [PMID: 34812384 PMCID: PMC8545228 DOI: 10.1109/access.2021.3065456] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Accepted: 03/07/2021] [Indexed: 05/03/2023]
Abstract
Chest X-ray images are useful for early COVID-19 diagnosis with the advantage that X-ray devices are already available in health centers and images are obtained immediately. Some datasets containing X-ray images with cases (pneumonia or COVID-19) and controls have been made available to develop machine-learning-based methods to aid in diagnosing the disease. However, these datasets are mainly composed of different sources coming from pre-COVID-19 datasets and COVID-19 datasets. Particularly, we have detected a significant bias in some of the released datasets used to train and test diagnostic systems, which might imply that the results published are optimistic and may overestimate the actual predictive capacity of the techniques proposed. In this article, we analyze the existing bias in some commonly used datasets and propose a series of preliminary steps to carry out before the classic machine learning pipeline in order to detect possible biases, to avoid them if possible and to report results that are more representative of the actual predictive power of the methods under analysis.
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Affiliation(s)
- Omar Del Tejo Catala
- Instituto Tecnológico de Informática (ITI), Universitat Politècnica de València 46022 Valencia Spain
| | - Ismael Salvador Igual
- Instituto Tecnológico de Informática (ITI), Universitat Politècnica de València 46022 Valencia Spain
| | | | - David Millan Escriva
- Instituto Tecnológico de Informática (ITI), Universitat Politècnica de València 46022 Valencia Spain
| | - Vicent Ortiz Castello
- Instituto Tecnológico de Informática (ITI), Universitat Politècnica de València 46022 Valencia Spain
| | - Rafael Llobet
- Instituto Tecnológico de Informática (ITI), Universitat Politècnica de València 46022 Valencia Spain
- Department of Computer Systems and Computation (DSIC)Universitat Politècnica de València 46022 Valencia Spain
| | - Juan-Carlos Perez-Cortes
- Instituto Tecnológico de Informática (ITI), Universitat Politècnica de València 46022 Valencia Spain
- Department of Computing Engineering (DISCA)Universitat Politècnica de València 46022 Valencia Spain
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1928
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Tayarani N MH. Applications of artificial intelligence in battling against covid-19: A literature review. CHAOS, SOLITONS, AND FRACTALS 2021; 142:110338. [PMID: 33041533 PMCID: PMC7532790 DOI: 10.1016/j.chaos.2020.110338] [Citation(s) in RCA: 59] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 10/01/2020] [Indexed: 05/14/2023]
Abstract
Colloquially known as coronavirus, the Severe Acute Respiratory Syndrome CoronaVirus 2 (SARS-CoV-2), that causes CoronaVirus Disease 2019 (COVID-19), has become a matter of grave concern for every country around the world. The rapid growth of the pandemic has wreaked havoc and prompted the need for immediate reactions to curb the effects. To manage the problems, many research in a variety of area of science have started studying the issue. Artificial Intelligence is among the area of science that has found great applications in tackling the problem in many aspects. Here, we perform an overview on the applications of AI in a variety of fields including diagnosis of the disease via different types of tests and symptoms, monitoring patients, identifying severity of a patient, processing covid-19 related imaging tests, epidemiology, pharmaceutical studies, etc. The aim of this paper is to perform a comprehensive survey on the applications of AI in battling against the difficulties the outbreak has caused. Thus we cover every way that AI approaches have been employed and to cover all the research until the writing of this paper. We try organize the works in a way that overall picture is comprehensible. Such a picture, although full of details, is very helpful in understand where AI sits in current pandemonium. We also tried to conclude the paper with ideas on how the problems can be tackled in a better way and provide some suggestions for future works.
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Affiliation(s)
- Mohammad-H Tayarani N
- Biocomputation Group, School of Computer Science, University of Hertfordshire, Hatfield, AL10 9AB, United Kingdom
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1929
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Podder S, Bhattacharjee S, Roy A. An efficient method of detection of COVID-19 using Mask R-CNN on chest X-Ray images. AIMS BIOPHYSICS 2021. [DOI: 10.3934/biophy.2021022] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
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1930
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Wu BX, Yang CG, Zhong JP. Research on Transfer Learning of Vision-based Gesture Recognition. INTERNATIONAL JOURNAL OF AUTOMATION AND COMPUTING 2021; 18:422-431. [PMCID: PMC7937516 DOI: 10.1007/s11633-020-1273-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Accepted: 12/23/2020] [Indexed: 06/19/2023]
Abstract
Gesture recognition has been widely used for human-robot interaction. At present, a problem in gesture recognition is that the researchers did not use the learned knowledge in existing domains to discover and recognize gestures in new domains. For each new domain, it is required to collect and annotate a large amount of data, and the training of the algorithm does not benefit from prior knowledge, leading to redundant calculation workload and excessive time investment. To address this problem, the paper proposes a method that could transfer gesture data in different domains. We use a red-green-blue (RGB) Camera to collect images of the gestures, and use Leap Motion to collect the coordinates of 21 joint points of the human hand. Then, we extract a set of novel feature descriptors from two different distributions of data for the study of transfer learning. This paper compares the effects of three classification algorithms, i.e., support vector machine (SVM), broad learning system (BLS) and deep learning (DL). We also compare learning performances with and without using the joint distribution adaptation (JDA) algorithm. The experimental results show that the proposed method could effectively solve the transfer problem between RGB Camera and Leap Motion. In addition, we found that when using DL to classify the data, excessive training on the source domain may reduce the accuracy of recognition in the target domain.
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Affiliation(s)
- Bi-Xiao Wu
- College of Automation Science and Engineering, South China University of Technology, Guangzhou, 510640 China
| | - Chen-Guang Yang
- College of Automation Science and Engineering, South China University of Technology, Guangzhou, 510640 China
- Foshan Newthinking Intelligent Technology Company Ltd., Foshan, 528231 China
| | - Jun-Pei Zhong
- Shien-Ming Wu School of Intelligent Engineering, South China University of Technology, Guangzhou, 511442 China
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1931
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Calderon-Ramirez S, Yang S, Moemeni A, Colreavy-Donnelly S, Elizondo DA, Oala L, Rodriguez-Capitan J, Jimenez-Navarro M, Lopez-Rubio E, Molina-Cabello MA. Improving Uncertainty Estimation With Semi-Supervised Deep Learning for COVID-19 Detection Using Chest X-Ray Images. IEEE ACCESS : PRACTICAL INNOVATIONS, OPEN SOLUTIONS 2021; 9:85442-85454. [PMID: 34812397 PMCID: PMC8545186 DOI: 10.1109/access.2021.3085418] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Accepted: 05/24/2021] [Indexed: 05/02/2023]
Abstract
In this work we implement a COVID-19 infection detection system based on chest X-ray images with uncertainty estimation. Uncertainty estimation is vital for safe usage of computer aided diagnosis tools in medical applications. Model estimations with high uncertainty should be carefully analyzed by a trained radiologist. We aim to improve uncertainty estimations using unlabelled data through the MixMatch semi-supervised framework. We test popular uncertainty estimation approaches, comprising Softmax scores, Monte-Carlo dropout and deterministic uncertainty quantification. To compare the reliability of the uncertainty estimates, we propose the usage of the Jensen-Shannon distance between the uncertainty distributions of correct and incorrect estimations. This metric is statistically relevant, unlike most previously used metrics, which often ignore the distribution of the uncertainty estimations. Our test results show a significant improvement in uncertainty estimates when using unlabelled data. The best results are obtained with the use of the Monte Carlo dropout method.
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Affiliation(s)
- Saul Calderon-Ramirez
- School of Computer Science and InformaticsDe Montfort University Leicester LE1 9BH U.K
- Instituto Tecnologico de Costa Rica Cartago 30101 Costa Rica
| | - Shengxiang Yang
- School of Computer Science and InformaticsDe Montfort University Leicester LE1 9BH U.K
| | - Armaghan Moemeni
- School of Computer ScienceUniversity of Nottingham Nottingham NG8 1BB U.K
| | | | - David A Elizondo
- School of Computer Science and InformaticsDe Montfort University Leicester LE1 9BH U.K
| | - Luis Oala
- XAI GroupArtificial Intelligence DepartmentFraunhofer Heinrich Hertz Institute 10587 Berlin Germany
| | - Jorge Rodriguez-Capitan
- CIBERCVHospital Universitario Virgen de la Victoria 29010 Málaga Spain
- Instituto de Investigación Biomédica de Mñlaga (IBIMA) 29010 Málaga Spain
| | - Manuel Jimenez-Navarro
- CIBERCVHospital Universitario Virgen de la Victoria 29010 Málaga Spain
- Instituto de Investigación Biomédica de Mñlaga (IBIMA) 29010 Málaga Spain
| | - Ezequiel Lopez-Rubio
- Department of Computer Languages and Computer ScienceUniversity of Málaga 29071 Málaga Spain
- Instituto de Investigación Biomédica de Mñlaga (IBIMA) 29010 Málaga Spain
| | - Miguel A Molina-Cabello
- Department of Computer Languages and Computer ScienceUniversity of Málaga 29071 Málaga Spain
- Instituto de Investigación Biomédica de Mñlaga (IBIMA) 29010 Málaga Spain
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1932
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Sethy PK, Behera SK, Anitha K, Pandey C, Khan MR. Computer aid screening of COVID-19 using X-ray and CT scan images: An inner comparison. JOURNAL OF X-RAY SCIENCE AND TECHNOLOGY 2021; 29:197-210. [PMID: 33492267 DOI: 10.3233/xst-200784] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The objective of this study is to conduct a critical analysis to investigate and compare a group of computer aid screening methods of COVID-19 using chest X-ray images and computed tomography (CT) images. The computer aid screening method includes deep feature extraction, transfer learning, and machine learning image classification approach. The deep feature extraction and transfer learning method considered 13 pre-trained CNN models. The machine learning approach includes three sets of handcrafted features and three classifiers. The pre-trained CNN models include AlexNet, GoogleNet, VGG16, VGG19, Densenet201, Resnet18, Resnet50, Resnet101, Inceptionv3, Inceptionresnetv2, Xception, MobileNetv2 and ShuffleNet. The handcrafted features are GLCM, LBP & HOG, and machine learning based classifiers are KNN, SVM & Naive Bayes. In addition, the different paradigms of classifiers are also analyzed. Overall, the comparative analysis is carried out in 65 classification models, i.e., 13 in deep feature extraction, 13 in transfer learning, and 39 in the machine learning approaches. Finally, all classification models perform better when applying to the chest X-ray image set as comparing to the use of CT scan image set. Among 65 classification models, the VGG19 with SVM achieved the highest accuracy of 99.81%when applying to the chest X-ray images. In conclusion, the findings of this analysis study are beneficial for the researchers who are working towards designing computer aid tools for screening COVID-19 infection diseases.
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Affiliation(s)
| | | | - Komma Anitha
- Department of Electronics and Communication Engineering, Prasad V Potluri Siddhartha Institute of Technology, Vijayawada, Andrapradesh, India
| | - Chanki Pandey
- Department of Electronics and Telecommunication Engineering, GEC, Jagdalpur, CG, India
| | - M R Khan
- Department of Electronics and Telecommunication Engineering, GEC, Jagdalpur, CG, India
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1933
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Abstract
In this paper, considering year 2020 and Covid-19, we analyze medical imaging tools and their performance scores in accordance with the dataset size and their complexity. For this, we mainly consider AI-driven tools that employ two different types of image data, namely chest Computed Tomography (CT) and X-ray. We elaborate on their strengths and weaknesses by taking the following important factors into account: i) dataset size; ii) model fitting criteria (over-fitting and under-fitting); iii) transfer learning in the deep learning era; and iv) data augmentation. Medical imaging tools do not explicitly analyze model fitting. Also, using transfer learning, with fewer data, one could possibly build Covid-19 deep learning model but they are limited to education and training. We observe that, in both image modalities, neither the dataset size nor does data augmentation work well for Covid-19 screening purposes because a large dataset does not guarantee all possible Covid-19 manifestations and data augmentation does not create new Covid-19 cases.
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1934
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Guefrechi S, Jabra MB, Ammar A, Koubaa A, Hamam H. Deep learning based detection of COVID-19 from chest X-ray images. MULTIMEDIA TOOLS AND APPLICATIONS 2021; 80:31803-31820. [PMID: 34305440 PMCID: PMC8286881 DOI: 10.1007/s11042-021-11192-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Revised: 05/19/2021] [Accepted: 06/24/2021] [Indexed: 05/08/2023]
Abstract
The whole world is facing a health crisis, that is unique in its kind, due to the COVID-19 pandemic. As the coronavirus continues spreading, researchers are concerned by providing or help provide solutions to save lives and to stop the pandemic outbreak. Among others, artificial intelligence (AI) has been adapted to address the challenges caused by pandemic. In this article, we design a deep learning system to extract features and detect COVID-19 from chest X-ray images. Three powerful networks, namely ResNet50, InceptionV3, and VGG16, have been fine-tuned on an enhanced dataset, which was constructed by collecting COVID-19 and normal chest X-ray images from different public databases. We applied data augmentation techniques to artificially generate a large number of chest X-ray images: Random Rotation with an angle between - 10 and 10 degrees, random noise, and horizontal flips. Experimental results are encouraging: the proposed models reached an accuracy of 97.20 % for Resnet50, 98.10 % for InceptionV3, and 98.30 % for VGG16 in classifying chest X-ray images as Normal or COVID-19. The results show that transfer learning is proven to be effective, showing strong performance and easy-to-deploy COVID-19 detection methods. This enables automatizing the process of analyzing X-ray images with high accuracy and it can also be used in cases where the materials and RT-PCR tests are limited.
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Affiliation(s)
- Sarra Guefrechi
- Faculty of Engineering, University of Moncton, Moncton, NB Canada
| | - Marwa Ben Jabra
- Charisma University, British Overseas Territories, Englewood, UK
- Robotics and Internet- of-Things Unit (RIoT) Lab, Riyadh, Saudi Arabia
| | - Adel Ammar
- Prince Sultan University, Riyadh, Saudi Arabia
| | - Anis Koubaa
- Prince Sultan University, Riyadh, Saudi Arabia
- Gaitech Robotics, Shanghai, China
- INESC- TEC, ISEP, Polytechnic Institute of Porto, Porto, Portugal
| | - Habib Hamam
- Faculty of Engineering, University of Moncton, Moncton, NB Canada
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1935
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Vega C. From Hume to Wuhan: An Epistemological Journey on the Problem of Induction in COVID-19 Machine Learning Models and its Impact Upon Medical Research. IEEE ACCESS : PRACTICAL INNOVATIONS, OPEN SOLUTIONS 2021; 9:97243-97250. [PMID: 34812399 PMCID: PMC8545192 DOI: 10.1109/access.2021.3095222] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Accepted: 07/03/2021] [Indexed: 05/08/2023]
Abstract
Advances in computer science have transformed the way artificial intelligence is employed in academia, with Machine Learning (ML) methods easily available to researchers from diverse areas thanks to intuitive frameworks that yield extraordinary results. Notwithstanding, current trends in the mainstream ML community tend to emphasise wins over knowledge, putting the scientific method aside, and focusing on maximising metrics of interest. Methodological flaws lead to poor justification of method choice, which in turn leads to disregard the limitations of the methods employed, ultimately putting at risk the translation of solutions into real-world clinical settings. This work exemplifies the impact of the problem of induction in medical research, studying the methodological issues of recent solutions for computer-aided diagnosis of COVID-19 from chest X-Ray images.
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Affiliation(s)
- Carlos Vega
- Luxembourg Centre for Systems Biomedicine, Bioinformatics Core GroupUniversité du Luxembourg 4365 Esch-sur-Alzette Luxembourg
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1936
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Chaddad A, Hassan L, Desrosiers C. Deep CNN models for predicting COVID-19 in CT and x-ray images. J Med Imaging (Bellingham) 2021; 8:014502. [PMID: 33912622 PMCID: PMC8071782 DOI: 10.1117/1.jmi.8.s1.014502] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Accepted: 03/26/2021] [Indexed: 01/12/2023] Open
Abstract
Purpose: Coronavirus disease 2019 (COVID-19) is a new infection that has spread worldwide and with no automatic model to reliably detect its presence from images. We aim to investigate the potential of deep transfer learning to predict COVID-19 infection using chest computed tomography (CT) and x-ray images. Approach: Regions of interest (ROI) corresponding to ground-glass opacities (GGO), consolidations, and pleural effusions were labeled in 100 axial lung CT images from 60 COVID-19-infected subjects. These segmented regions were then employed as an additional input to six deep convolutional neural network (CNN) architectures (AlexNet, DenseNet, GoogleNet, NASNet-Mobile, ResNet18, and DarkNet), pretrained on natural images, to differentiate between COVID-19 and normal CT images. We also explored the model's ability to classify x-ray images as COVID-19, non-COVID-19 pneumonia, or normal. Performance on test images was measured with global accuracy and area under the receiver operating characteristic curve (AUC). Results: When using raw CT images as input to the tested models, the highest accuracy of 82% and AUC of 88.16% is achieved. Incorporating the three ROIs as an additional model inputs further boosts performance to an accuracy of 82.30% and an AUC of 90.10% (DarkNet). For x-ray images, we obtained an outstanding AUC of 97% for classifying COVID-19 versus normal versus other. Combing chest CT and x-ray images, DarkNet architecture achieves the highest accuracy of 99.09% and AUC of 99.89% in classifying COVID-19 from non-COVID-19. Our results confirm the ability of deep CNNs with transfer learning to predict COVID-19 in both chest CT and x-ray images. Conclusions: The proposed method could help radiologists increase the accuracy of their diagnosis and increase efficiency in COVID-19 management.
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Affiliation(s)
- Ahmad Chaddad
- Guilin University of Electronic Technology, School of Artificial Intelligence, Guilin, China
| | - Lama Hassan
- Guilin University of Electronic Technology, School of Artificial Intelligence, Guilin, China
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1937
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Polat Ç, Karaman O, Karaman C, Korkmaz G, Balcı MC, Kelek SE. COVID-19 diagnosis from chest X-ray images using transfer learning: Enhanced performance by debiasing dataloader. JOURNAL OF X-RAY SCIENCE AND TECHNOLOGY 2021; 29:19-36. [PMID: 33459685 PMCID: PMC7990426 DOI: 10.3233/xst-200757] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2020] [Revised: 11/11/2020] [Accepted: 11/30/2020] [Indexed: 05/24/2023]
Abstract
BACKGROUND Chest X-ray imaging has been proved as a powerful diagnostic method to detect and diagnose COVID-19 cases due to its easy accessibility, lower cost and rapid imaging time. OBJECTIVE This study aims to improve efficacy of screening COVID-19 infected patients using chest X-ray images with the help of a developed deep convolutional neural network model (CNN) entitled nCoV-NET. METHODS To train and to evaluate the performance of the developed model, three datasets were collected from resources of "ChestX-ray14", "COVID-19 image data collection", and "Chest X-ray collection from Indiana University," respectively. Overall, 299 COVID-19 pneumonia cases and 1,522 non-COVID 19 cases are involved in this study. To overcome the probable bias due to the unbalanced cases in two classes of the datasets, ResNet, DenseNet, and VGG architectures were re-trained in the fine-tuning stage of the process to distinguish COVID-19 classes using a transfer learning method. Lastly, the optimized final nCoV-NET model was applied to the testing dataset to verify the performance of the proposed model. RESULTS Although the performance parameters of all re-trained architectures were determined close to each other, the final nCOV-NET model optimized by using DenseNet-161 architecture in the transfer learning stage exhibits the highest performance for classification of COVID-19 cases with the accuracy of 97.1 %. The Activation Mapping method was used to create activation maps that highlights the crucial areas of the radiograph to improve causality and intelligibility. CONCLUSION This study demonstrated that the proposed CNN model called nCoV-NET can be utilized for reliably detecting COVID-19 cases using chest X-ray images to accelerate the triaging and save critical time for disease control as well as assisting the radiologist to validate their initial diagnosis.
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Affiliation(s)
- Çağín Polat
- Notrino Research, ODTÜ Teknokent, Ankara, Turkey
| | - Onur Karaman
- Department of Medical Imaging Techniques, Akdeniz University, Vocational School of Health Services, Antalya, Turkey
| | - Ceren Karaman
- Department of Electricity and Energy, Akdeniz University, Vocational School of Technical Sciences, Antalya, Turkey
| | | | | | - Sevim Ercan Kelek
- Department of Medical Laboratory Techniques, Akdeniz University, Vocational School of Health Services, Antalya, Turkey
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1938
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Hussain E, Hasan M, Rahman MA, Lee I, Tamanna T, Parvez MZ. CoroDet: A deep learning based classification for COVID-19 detection using chest X-ray images. CHAOS, SOLITONS, AND FRACTALS 2021; 142:110495. [PMID: 33250589 PMCID: PMC7682527 DOI: 10.1016/j.chaos.2020.110495] [Citation(s) in RCA: 130] [Impact Index Per Article: 43.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Accepted: 11/18/2020] [Indexed: 05/02/2023]
Abstract
BACKGROUND AND OBJECTIVE The Coronavirus 2019, or shortly COVID-19, is a viral disease that causes serious pneumonia and impacts our different body parts from mild to severe depending on patient's immune system. This infection was first reported in Wuhan city of China in December 2019, and afterward, it became a global pandemic spreading rapidly around the world. As the virus spreads through human to human contact, it has affected our lives in a devastating way, including the vigorous pressure on the public health system, the world economy, education sector, workplaces, and shopping malls. Preventing viral spreading requires early detection of positive cases and to treat infected patients as quickly as possible. The need for COVID-19 testing kits has increased, and many of the developing countries in the world are facing a shortage of testing kits as new cases are increasing day by day. In this situation, the recent research using radiology imaging (such as X-ray and CT scan) techniques can be proven helpful to detect COVID-19 as X-ray and CT scan images provide important information about the disease caused by COVID-19 virus. The latest data mining and machine learning techniques such as Convolutional Neural Network (CNN) can be applied along with X-ray and CT scan images of the lungs for the accurate and rapid detection of the disease, assisting in mitigating the problem of scarcity of testing kits. METHODS Hence a novel CNN model called CoroDet for automatic detection of COVID-19 by using raw chest X-ray and CT scan images have been proposed in this study. CoroDet is developed to serve as an accurate diagnostics for 2 class classification (COVID and Normal), 3 class classification (COVID, Normal, and non-COVID pneumonia), and 4 class classification (COVID, Normal, non-COVID viral pneumonia, and non-COVID bacterial pneumonia). RESULTS The performance of our proposed model was compared with ten existing techniques for COVID detection in terms of accuracy. A classification accuracy of 99.1% for 2 class classification, 94.2% for 3 class classification, and 91.2% for 4 class classification was produced by our proposed model, which is obviously better than the state-of-the-art-methods used for COVID-19 detection to the best of our knowledge. Moreover, the dataset with x-ray images that we prepared for the evaluation of our method is the largest datasets for COVID detection as far as our knowledge goes. CONCLUSION The experimental results of our proposed method CoroDet indicate the superiority of CoroDet over the existing state-of-the-art-methods. CoroDet may assist clinicians in making appropriate decisions for COVID-19 detection and may also mitigate the problem of scarcity of testing kits.
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Affiliation(s)
- Emtiaz Hussain
- Department of Computer Science and Engineering, Brac University, Dhaka, Bangladesh
| | - Mahmudul Hasan
- Department of Computer Science and Engineering, Brac University, Dhaka, Bangladesh
| | - Md Anisur Rahman
- School of Computing & Mathematics, Charles Sturt University, Bathurst, NSW 2795, Australia
| | - Ickjai Lee
- Discipline of Information Technology, College of Science & Engineering, James Cook University, Cairns, QLD 4870, Australia
| | - Tasmi Tamanna
- Department of Immunology, Bangladesh University of Health Sciences, Dhaka, Bangladesh
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1939
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Aslan MF, Unlersen MF, Sabanci K, Durdu A. CNN-based transfer learning-BiLSTM network: A novel approach for COVID-19 infection detection. Appl Soft Comput 2021; 98:106912. [PMID: 33230395 PMCID: PMC7673219 DOI: 10.1016/j.asoc.2020.106912] [Citation(s) in RCA: 129] [Impact Index Per Article: 43.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2020] [Revised: 11/08/2020] [Accepted: 11/11/2020] [Indexed: 02/07/2023]
Abstract
Coronavirus disease 2019 (COVID-2019), which emerged in Wuhan, China in 2019 and has spread rapidly all over the world since the beginning of 2020, has infected millions of people and caused many deaths. For this pandemic, which is still in effect, mobilization has started all over the world, and various restrictions and precautions have been taken to prevent the spread of this disease. In addition, infected people must be identified in order to control the infection. However, due to the inadequate number of Reverse Transcription Polymerase Chain Reaction (RT-PCR) tests, Chest computed tomography (CT) becomes a popular tool to assist the diagnosis of COVID-19. In this study, two deep learning architectures have been proposed that automatically detect positive COVID-19 cases using Chest CT X-ray images. Lung segmentation (preprocessing) in CT images, which are given as input to these proposed architectures, is performed automatically with Artificial Neural Networks (ANN). Since both architectures contain AlexNet architecture, the recommended method is a transfer learning application. However, the second proposed architecture is a hybrid structure as it contains a Bidirectional Long Short-Term Memories (BiLSTM) layer, which also takes into account the temporal properties. While the COVID-19 classification accuracy of the first architecture is 98.14%, this value is 98.70% in the second hybrid architecture. The results prove that the proposed architecture shows outstanding success in infection detection and, therefore this study contributes to previous studies in terms of both deep architectural design and high classification success.
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Affiliation(s)
- Muhammet Fatih Aslan
- Electrical and Electronics Engineering, Karamanoglu Mehmetbey University, Karaman, Turkey
| | | | - Kadir Sabanci
- Electrical and Electronics Engineering, Karamanoglu Mehmetbey University, Karaman, Turkey
| | - Akif Durdu
- Electrical and Electronics Engineering, Konya Technical University, Konya, Turkey
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1940
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Madaan V, Roy A, Gupta C, Agrawal P, Sharma A, Bologa C, Prodan R. XCOVNet: Chest X-ray Image Classification for COVID-19 Early Detection Using Convolutional Neural Networks. NEW GENERATION COMPUTING 2021; 39:583-597. [PMID: 33642663 PMCID: PMC7903219 DOI: 10.1007/s00354-021-00121-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2020] [Accepted: 01/26/2021] [Indexed: 05/06/2023]
Abstract
COVID-19 (also known as SARS-COV-2) pandemic has spread in the entire world. It is a contagious disease that easily spreads from one person in direct contact to another, classified by experts in five categories: asymptomatic, mild, moderate, severe, and critical. Already more than 66 million people got infected worldwide with more than 22 million active patients as of 5 December 2020 and the rate is accelerating. More than 1.5 million patients (approximately 2.5% of total reported cases) across the world lost their life. In many places, the COVID-19 detection takes place through reverse transcription polymerase chain reaction (RT-PCR) tests which may take longer than 48 h. This is one major reason of its severity and rapid spread. We propose in this paper a two-phase X-ray image classification called XCOVNet for early COVID-19 detection using convolutional neural Networks model. XCOVNet detects COVID-19 infections in chest X-ray patient images in two phases. The first phase pre-processes a dataset of 392 chest X-ray images of which half are COVID-19 positive and half are negative. The second phase trains and tunes the neural network model to achieve a 98.44% accuracy in patient classification.
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Affiliation(s)
- Vishu Madaan
- Lovely Professional University, Phagwara, Punjab India
| | - Aditya Roy
- Lovely Professional University, Phagwara, Punjab India
| | - Charu Gupta
- Bhagwan Parshuram Institute of Technology, New Delhi, India
| | - Prateek Agrawal
- Lovely Professional University, Phagwara, Punjab India
- University of Klagenfurt, Klagenfurt, Austria
| | - Anand Sharma
- Mody University of Science and Technology, Laxmangarh, Rajasthan India
| | | | - Radu Prodan
- University of Klagenfurt, Klagenfurt, Austria
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1941
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Shelke A, Inamdar M, Shah V, Tiwari A, Hussain A, Chafekar T, Mehendale N. Chest X-ray Classification Using Deep Learning for Automated COVID-19 Screening. SN COMPUTER SCIENCE 2021; 2:300. [PMID: 34075355 DOI: 10.1101/2020.06.21.20136598] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 05/10/2021] [Indexed: 05/18/2023]
Abstract
UNLABELLED In today's world, we find ourselves struggling to fight one of the worst pandemics in the history of humanity known as COVID-2019 caused by a coronavirus. When the virus reaches the lungs, we observe ground-glass opacity in the chest X-ray due to fibrosis in the lungs. Due to the significant differences between X-ray images of an infected and non-infected person, artificial intelligence techniques can be used to identify the presence and severity of the infection. We propose a classification model that can analyze the chest X-rays and help in the accurate diagnosis of COVID-19. Our methodology classifies the chest X-rays into four classes viz. normal, pneumonia, tuberculosis (TB), and COVID-19. Further, the X-rays indicating COVID-19 are classified on a severity-basis into mild, medium, and severe. The deep learning model used for the classification of pneumonia, TB, and normal is VGG-16 with a test accuracy of 95.9 %. For the segregation of normal pneumonia and COVID-19, the DenseNet-161 was used with a test accuracy of 98.9 %, whereas the ResNet-18 worked best for severity classification achieving a test accuracy up to 76 %. Our approach allows mass screening of the people using X-rays as a primary validation for COVID-19. SUPPLEMENTARY INFORMATION The online version contains supplementary material available at 10.1007/s42979-021-00695-5.
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Affiliation(s)
- Ankita Shelke
- K. J. Somaiya College of Engineering, Vidyavihar, Mumbai, India Maharshtra 400077
| | - Madhura Inamdar
- K. J. Somaiya College of Engineering, Vidyavihar, Mumbai, India Maharshtra 400077
| | - Vruddhi Shah
- K. J. Somaiya College of Engineering, Vidyavihar, Mumbai, India Maharshtra 400077
| | - Amanshu Tiwari
- K. J. Somaiya College of Engineering, Vidyavihar, Mumbai, India Maharshtra 400077
| | - Aafiya Hussain
- K. J. Somaiya College of Engineering, Vidyavihar, Mumbai, India Maharshtra 400077
| | - Talha Chafekar
- K. J. Somaiya College of Engineering, Vidyavihar, Mumbai, India Maharshtra 400077
| | - Ninad Mehendale
- K. J. Somaiya College of Engineering, Vidyavihar, Mumbai, India Maharshtra 400077
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1942
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Taresh MM, Zhu N, Ali TAA, Hameed AS, Mutar ML. Transfer Learning to Detect COVID-19 Automatically from X-Ray Images Using Convolutional Neural Networks. Int J Biomed Imaging 2021. [PMID: 34194484 DOI: 10.1101/2020.08.25.20182170] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/09/2023] Open
Abstract
The novel coronavirus disease 2019 (COVID-19) is a contagious disease that has caused thousands of deaths and infected millions worldwide. Thus, various technologies that allow for the fast detection of COVID-19 infections with high accuracy can offer healthcare professionals much-needed help. This study is aimed at evaluating the effectiveness of the state-of-the-art pretrained Convolutional Neural Networks (CNNs) on the automatic diagnosis of COVID-19 from chest X-rays (CXRs). The dataset used in the experiments consists of 1200 CXR images from individuals with COVID-19, 1345 CXR images from individuals with viral pneumonia, and 1341 CXR images from healthy individuals. In this paper, the effectiveness of artificial intelligence (AI) in the rapid and precise identification of COVID-19 from CXR images has been explored based on different pretrained deep learning algorithms and fine-tuned to maximise detection accuracy to identify the best algorithms. The results showed that deep learning with X-ray imaging is useful in collecting critical biological markers associated with COVID-19 infections. VGG16 and MobileNet obtained the highest accuracy of 98.28%. However, VGG16 outperformed all other models in COVID-19 detection with an accuracy, F1 score, precision, specificity, and sensitivity of 98.72%, 97.59%, 96.43%, 98.70%, and 98.78%, respectively. The outstanding performance of these pretrained models can significantly improve the speed and accuracy of COVID-19 diagnosis. However, a larger dataset of COVID-19 X-ray images is required for a more accurate and reliable identification of COVID-19 infections when using deep transfer learning. This would be extremely beneficial in this pandemic when the disease burden and the need for preventive measures are in conflict with the currently available resources.
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Affiliation(s)
| | - Ningbo Zhu
- College of Information Science and Engineering, Hunan University, Changsha 400013, China
| | - Talal Ahmed Ali Ali
- College of Information Science and Engineering, Hunan University, Changsha 400013, China
| | - Asaad Shakir Hameed
- Department of Mathematics, General Directorate of Thi-Qar Education, Ministry of Education, Thi-Qar, Iraq
| | - Modhi Lafta Mutar
- Faculty of Information and Communication Technology, Universiti Teknikal Malaysia Melaka, Hang Tuah Jaya, Durian Tunggal, Melaka, Malaysia
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1943
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Manokaran J, Zabihollahy F, Hamilton-Wright A, Ukwatta E. Detection of COVID-19 from chest x-ray images using transfer learning. J Med Imaging (Bellingham) 2021; 8:017503. [PMID: 34435075 PMCID: PMC8382139 DOI: 10.1117/1.jmi.8.s1.017503] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2021] [Accepted: 08/06/2021] [Indexed: 12/18/2022] Open
Abstract
Purpose: The objective of this study is to develop and evaluate a fully automated, deep learning-based method for detection of COVID-19 infection from chest x-ray images. Approach: The proposed model was developed by replacing the final classifier layer in DenseNet201 with a new network consisting of global averaging layer, batch normalization layer, a dense layer with ReLU activation, and a final classification layer. Then, we performed an end-to-end training using the initial pretrained weights on all the layers. Our model was trained using a total of 8644 images with 4000 images each in normal and pneumonia cases and 644 in COVID-19 cases representing a large real dataset. The proposed method was evaluated based on accuracy, sensitivity, specificity, ROC curve, and F 1 -score using a test dataset comprising 1729 images (129 COVID-19, 800 normal, and 800 pneumonia). As a benchmark, we also compared the results of our method with those of seven state-of-the-art pretrained models and with a lightweight CNN architecture designed from scratch. Results: The proposed model based on DenseNet201 was able to achieve an accuracy of 94% in detecting COVID-19 and an overall accuracy of 92.19%. The model was able to achieve an AUC of 0.99 for COVID-19, 0.97 for normal, and 0.97 for pneumonia. The model was able to outperform alternative models in terms of overall accuracy, sensitivity, and specificity. Conclusions: Our proposed automated diagnostic model yielded an accuracy of 94% in the initial screening of COVID-19 patients and an overall accuracy of 92.19% using chest x-ray images.
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Affiliation(s)
- Jenita Manokaran
- University of Guelph, School of Engineering, Biomedical Engineering, Guelph, Ontario, Canada
| | - Fatemeh Zabihollahy
- The Johns Hopkins University, School of Medicine, Department of Radiation Oncology and Molecular Radiation Sciences, Baltimore, Maryland, United States
| | | | - Eranga Ukwatta
- University of Guelph, School of Engineering, Biomedical Engineering, Guelph, Ontario, Canada
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1944
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Bhargava A, Bansal A. Novel coronavirus (COVID-19) diagnosis using computer vision and artificial intelligence techniques: a review. MULTIMEDIA TOOLS AND APPLICATIONS 2021; 80:19931-19946. [PMID: 33686333 PMCID: PMC7928188 DOI: 10.1007/s11042-021-10714-5] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2020] [Revised: 10/23/2020] [Accepted: 02/10/2021] [Indexed: 05/07/2023]
Abstract
The universal transmission of pandemic COVID-19 (Coronavirus) causes an immediate need to commit in the fight across the whole human population. The emergencies for human health care are limited for this abrupt outbreak and abandoned environment. In this situation, inventive automation like computer vision (machine learning, deep learning, artificial intelligence), medical imaging (computed tomography, X-Ray) has developed an encouraging solution against COVID-19. In recent months, different techniques using image processing are done by various researchers. In this paper, a major review on image acquisition, segmentation, diagnosis, avoidance, and management are presented. An analytical comparison of the various proposed algorithm by researchers for coronavirus has been carried out. Also, challenges and motivation for research in the future to deal with coronavirus are indicated. The clinical impact and use of computer vision and deep learning were discussed and we hope that dermatologists may have better understanding of these areas from the study.
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1945
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Abstract
This 21st century is notable for experiencing so many disturbances at economic, social, cultural, and political levels in the entire world. The outbreak of novel corona virus 2019 (COVID-19) has been treated as a Public Health crisis of global Concern by the World Health Organization (WHO). Various outbreak models for COVID-19 are being utilized by researchers throughout the world to get well-versed decisions and impose significant control measures. Amid the standard methods for COVID-19 worldwide epidemic prediction, easy statistical, as well as epidemiological methods have got more consideration by researchers and authorities. One main difficulty in controlling the spreading of COVID-19 is the inadequacy and lack of medical tests for detecting as well as identifying a solution. To solve this problem, a few statistical-based advances are being enhanced and turn into a partial resolution up-to some level. To deal with the challenges of the medical field, a broad range of intelligent based methods, frameworks, and equipment have been recommended by Machine Learning (ML) and Deep Learning. As ML and DL have the ability of identifying and predicting patterns in complex large datasets, they are recognized as a suitable procedure for producing effective solutions for the diagnosis of COVID-19. In this paper, a perspective research has been conducted in the applicability of intelligent systems such as ML, DL and others in solving COVID-19 related outbreak issues. The main intention behind this study is (i) to understand the importance of intelligent approaches such as ML and DL for COVID-19 pandemic, (ii) discussing the efficiency and impact of these methods in the prognosis of COVID-19, (iii) the growth in the development of type of ML and advanced ML methods for COVID-19 prognosis,(iv) analyzing the impact of data types and the nature of data along with challenges in processing the data for COVID-19,(v) to focus on some future challenges in COVID-19 prognosis to inspire the researchers for innovating and enhancing their knowledge and research on other impacted sectors due to COVID-19.
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1946
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Corbacho Abelaira MD, Corbacho Abelaira F, Ruano-Ravina A, Fernández-Villar A. Use of Conventional Chest Imaging and Artificial Intelligence in COVID-19 Infection. A Review of the Literature. OPEN RESPIRATORY ARCHIVES 2021; 3:100078. [PMID: 38620646 PMCID: PMC7834680 DOI: 10.1016/j.opresp.2020.100078] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2020] [Accepted: 12/02/2020] [Indexed: 12/23/2022] Open
Abstract
The coronavirus disease caused by SARS-Cov-2 is a pandemic with millions of confirmed cases around the world and a high death toll. Currently, the real-time polymerase chain reaction (RT-PCR) is the standard diagnostic method for determining COVID-19 infection. Various failures in the detection of the disease by means of laboratory samples have raised certain doubts about the characterisation of the infection and the spread of contacts. In clinical practice, chest radiography (RT) and chest computed tomography (CT) are extremely helpful and have been widely used in the detection and diagnosis of COVID-19. RT is the most common and widely available diagnostic imaging technique, however, its reading by less qualified personnel, in many cases with work overload, causes a high number of errors to be committed. Chest CT can be used for triage, diagnosis, assessment of severity, progression, and response to treatment. Currently, artificial intelligence (AI) algorithms have shown promise in image classification, showing that they can reduce diagnostic errors by at least matching the diagnostic performance of radiologists. This review shows how AI applied to thoracic radiology speeds up and improves diagnosis, allowing to optimise the workflow of radiologists. It can provide an objective evaluation and achieve a reduction in subjectivity and variability. AI can also help to optimise the resources and increase the efficiency in the management of COVID-19 infection.
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Affiliation(s)
| | | | - Alberto Ruano-Ravina
- Medicine School, University of Santiago, Area of Preventive Medicine and Public Health, CIBER of Epidemiology and Public Health, CIBERESP, Instituto de Salud Carlos II, Spain
| | - Alberto Fernández-Villar
- Pulmonary Department, Hospital Álvaro Cunqueiro, EOXI Vigo, PneumoVigoI+I Research Group, Health Research Institute Galicia Sur (IIS Galicia Sur), Vigo, Spain
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1947
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Elpeltagy M, Sallam H. Automatic prediction of COVID- 19 from chest images using modified ResNet50. MULTIMEDIA TOOLS AND APPLICATIONS 2021; 80:26451-26463. [PMID: 33967592 PMCID: PMC8095476 DOI: 10.1007/s11042-021-10783-6] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Revised: 11/24/2020] [Accepted: 03/04/2021] [Indexed: 05/08/2023]
Abstract
Recently coronavirus 2019 (COVID-2019), discovered in Wuhan city of China in December 2019 announced as world pandemic by the World Health Organization (WHO). It has catastrophic impacts on daily lives, public health, and the global economy. The detection of coronavirus (COVID- 19) is now a critical task for medical specialists. Laboratory methods for detecting the virus such as Polymerase Chain Reaction, antigens, and antibodies have pros and cons represented in time required to obtain results, accuracy, cost and suitability of the test to phase of infection. The need for accurate, fast, and cheap auxiliary diagnostic tools has become a necessity as there are no accurate automated toolkits available. Other medical investigations such as chest X-ray and Computerized Tomography scans are imaging techniques that play an important role in the diagnosis of COVID- 19 virus. Application of advanced artificial intelligence techniques for processing radiological imaging can be helpful for the accurate detection of this virus. However, Due to the small dataset available for COVID- 19, transfer learning from pre-trained convolution neural networks, CNNs can be used as a promising solution for diagnosis of coronavirus. Transfer learning becomes an effective mechanism by transferring knowledge from generic object recognition tasks to domain-specific tasks. Hence, the main contribution of this paper is to exploit the pre-trained deep learning CNN architectures as a cornerstone to enhance and build up an automated tool for detection and diagnosis of COVID- 19 in chest X-Ray and Computerized Tomography images. The main idea is to make use of their convolutional neural network structure and its learned weights on large datasets such as ImageNet. Moreover, a modification to ResNet50 is proposed to classify the patients as COVID infected or not. This modification includes adding three new layers, named, 'Conv', 'Batch_Normaliz' and 'Activation_Relu' layers. These layers are injected in the ResNet50 architecture for accurate discrimination and robust feature extraction. Extensive experiments are carried out to assess the performance of the proposed model on COVID- 19 chest X-Ray and Computerized Tomography scan images. Experimental results approve that the proposed modification, injected layers, increases the diagnosis accuracy to 97.7% for Computerized Tomography dataset and 97.1% for X-Ray dataset which is superior compared to other approaches.
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Affiliation(s)
- Marwa Elpeltagy
- Systems and Computers Department, Al-Azhar University, Nasr City, Cairo Egypt
| | - Hany Sallam
- Egyptian Nuclear and Radiological Regulatory Authority, Nasr City, Cairo Egypt
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1948
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Treatment of the hypertensive patient in 2030. J Hum Hypertens 2021; 35:818-820. [PMID: 33127958 PMCID: PMC7597427 DOI: 10.1038/s41371-020-00437-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Revised: 08/10/2020] [Accepted: 10/20/2020] [Indexed: 01/31/2023]
Abstract
Sarah Bingham, a 45 year old carer for her grandmother who suffered a stroke 4 months ago, feels a buzz on her wrist. It's time for them both to take their medications. Sarah makes dinner and leaves for her evening run. Her smartwatch detects her exit and turns off her TV as advertisements for incentivised private health insurance commence.
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1949
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Mitrofanova A, Mikhaylov D, Shaznaev I, Chumanskaia V, Saveliev V. Acoustery System for Differential Diagnosing of Coronavirus COVID-19 Disease. IEEE OPEN JOURNAL OF ENGINEERING IN MEDICINE AND BIOLOGY 2021; 2:299-303. [PMID: 35402972 PMCID: PMC8940188 DOI: 10.1109/ojemb.2021.3127078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Revised: 10/12/2021] [Accepted: 11/05/2021] [Indexed: 11/08/2022] Open
Abstract
Goal: Because of the outbreak of coronavirus infection, healthcare systems are faced with the lack of medical professionals. We present a system for the differential diagnosis of coronavirus disease, based on deep learning techniques, which can be implemented in clinics. Methods: A recurrent network with a convolutional neural network as an encoder and an attention mechanism is used. A database of about 3000 records of coughing was collected. The data was collected through the Acoustery mobile application in hospitals in Russia, Belarus, and Kazakhstan from April 2020 to October 2020. Results: The model classification accuracy reaches 85%. Values of precision and recall metrics are 78.5% and 73%. Conclusions: We reached satisfactory results in solving the problem. The proposed model is already being tested by doctors to understand the ways of improvement. Other architectures should be considered that use a larger training sample and all available patient information.
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Affiliation(s)
| | - Dmitry Mikhaylov
- Lebedev Physical InstituteRussian Academy of Sciences Moscow 119991 Russia
| | | | - Vera Chumanskaia
- Immanuel Kant Baltic Federal University Kaliningrad 236041 Russia
| | - Valeri Saveliev
- Huazhong University of Science and Technology Wuhan 430074 Hubei China
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1950
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Sharma N, Anand A, Singh AK. Bio-signal data sharing security through watermarking: a technical survey. COMPUTING 2021; 103:1883-1917. [PMCID: PMC7786322 DOI: 10.1007/s00607-020-00881-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2020] [Accepted: 11/23/2020] [Indexed: 06/13/2023]
Abstract
Due to smart healthcare systems highly connected information and communications technologies, sensitive medical information and records are easily transmitted over the networks. However, stealing of healthcare data is increasing crime every day to greatly impact on financial loss. In order to this, researchers are developing various cost-effective bio-signal based data hiding techniques for smart healthcare applications. In this paper, we first introduce various aspects of data hiding along with major properties, generic embedding and extraction process, and recent applications. This survey provides a comprehensive survey on data hiding techniques, and their new trends for solving new challenges in real-world applications. Then, we survey the various notable bio-signal based data hiding techniques. The summary of some notable techniques in terms of their objective, type of data hiding, methodology and database used, performance metrics, important features, and limitations are also presented in tabular form. At the end, we discuss the major issues and research directions to explore the promising areas for future research.
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Affiliation(s)
- N. Sharma
- Department of CSE, NIT Patna, Patna, Bihar India
| | - A. Anand
- Department of CSE, NIT Patna, Patna, Bihar India
| | - A. K. Singh
- Department of CSE, NIT Patna, Patna, Bihar India
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