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Zhang X, Cheng J, Lin Y, Fu Y, Xie J, Li B, Bian X, Feng Y, Liang W, Tang Q, Zhang H, Liu X, Zhang Y, Liu C, Jiang D. Editing homologous copies of an essential gene affords crop resistance against two cosmopolitan necrotrophic pathogens. PLANT BIOTECHNOLOGY JOURNAL 2021; 19:2349-2361. [PMID: 34265153 PMCID: PMC8541787 DOI: 10.1111/pbi.13667] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 06/17/2021] [Accepted: 07/07/2021] [Indexed: 05/03/2023]
Abstract
Sclerotinia sclerotiorum and Botrytis cinerea are typical necrotrophic pathogens that can attack more than 700 and 3000 plant species, respectively, and cause huge economic losses across numerous crops. In particular, the absence of resistant cultivars makes the stem rot because of S. sclerotiorum the major threat of rapeseed (Brassica napus) worldwide along with Botrytis. Previously, we identified an effector-like protein (SsSSVP1) from S. sclerotiorum and a homologue of SsSSVP1 on B. cinerea genome and found that SsSSVP1 could interact with BnQCR8 of rapeseed, a subunit of the cytochrome b-c1 complex. In this study, we found that BnQCR8 has eight homologous copies in rapeseed cultivar Westar and reduced the copy number of BnQCR8 using CRISPR/Cas9 to improve rapeseed resistance against S. sclerotiorum. Mutants with one or more copies of BnQCR8 edited showed strong resistance against S. sclerotiorum and B. cinerea. BnQCR8-edited mutants did not show significant difference from Westar in terms of respiration and agronomic traits tested, including the plant shape, flowering time, silique size, seed number, thousand seed weight and seed oil content. These traits make it possible to use these mutants directly for commercial production. Our study highlights a common gene for breeding of rapeseed to unravel the key hindrance of rapeseed production caused by S. sclerotiorum and B. cinerea. In contrast to previously established methodologies, our findings provide a novel strategy to develop crops with high resistance against multiple pathogens by editing only a single gene that encodes the common target of pathogen effectors.
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Affiliation(s)
- Xuekun Zhang
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Jiasen Cheng
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Yang Lin
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Yanping Fu
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Jiatao Xie
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Bo Li
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Xuefeng Bian
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Yanbo Feng
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Weibo Liang
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Qian Tang
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Hongxiang Zhang
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Xiaofan Liu
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Yu Zhang
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Changxing Liu
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
| | - Daohong Jiang
- State Key Laboratory of Agricultural MicrobiologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Key Laboratory of Plant PathologyHuazhong Agricultural UniversityWuhanHubei ProvinceChina
- Hubei Hongshan LaboratoryWuhanChina
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202
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Thole V, Vain P, Martin C. Effect of Elevated Temperature on Tomato Post-Harvest Properties. PLANTS 2021; 10:plants10112359. [PMID: 34834722 PMCID: PMC8623658 DOI: 10.3390/plants10112359] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Revised: 10/22/2021] [Accepted: 10/27/2021] [Indexed: 11/16/2022]
Abstract
The fleshy fruit of tomato (Solanum lycopersicum) is a commodity used worldwide as a fresh or processed product. Like many crops, tomato plants and harvested fruits are susceptible to the onset of climate change. Temperature plays a key role in tomato fruit production and ripening, including softening, development of fruit colour, flavour and aroma. The combination of climate change and the drive to reduce carbon emission and energy consumption is likely to affect tomato post-harvest storage conditions. In this study, we investigated the effect of an elevated storage temperature on tomato shelf life and fungal susceptibility. A collection of 41 genotypes with low and high field performance at elevated temperature, including different growth, fruit and market types, was used to assess post-harvest performances. A temperature increase from 18–20 °C to 26 °C reduced average shelf life of fruit by 4 days ± 1 day and increased fungal susceptibility by 11% ± 5% across all genotypes. We identified tomato varieties that exhibit both favourable post-harvest fruit quality and high field performance at elevated temperature. This work contributes to efforts to enhance crop resilience by selecting for thermotolerance combined with traits suitable to maintain and improve fruit quality, shelf life and pathogen susceptibility under changing climate conditions.
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Abstract
The demand for ecofriendly green catalysts for biofuel synthesis is greatly increasing with the effects of fossil fuel depletion. Fungal lipases are abundantly used as biocatalysts for the synthesis of biofuel. The use of Botrytis cinerea lipase is an excellent approach for the conversion of agroindustrial residues into biofuel. In this study, phylogenetic analyses were carried out and the physicochemical properties of B. cinerea lipase were assessed. Furthermore, the protein structure of B. cinerea lipase was predicted and refined. Putative energy-rich phytolipid compounds were explored as a substrate for the synthesis of biofuel, owing to B. cinerea lipase catalysis. Approximately 161 plant-based fatty acids were docked with B. cinerea lipase in order to evaluate their binding affinities and interactions. Among the docked fatty acids, the top ten triglycerides having the lowest number of binding affinities with B. cinerea lipase were selected, and their interactions were assessed. The top three triglycerides having the greatest number of hydrogen bonds and hydrophobic interactions were selected for simulations of 20 ns. The docking and simulations revealed that docosahexaenoic acid, dicranin, and hexadeca-7,10,13-trienoic acid had stable bonding with the B. cinerea lipase. Therefore, B. cinerea lipase has the potential to be used for the transesterification of fatty acids into biofuels, whereas docosahexaenoic acid, dicranin, and hexadeca-7,10,13-trienoic acid can be used as substrates of B. cinerea lipase for biofuel synthesis.
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204
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Cytokinin Inhibits Fungal Development and Virulence by Targeting the Cytoskeleton and Cellular Trafficking. mBio 2021; 12:e0306820. [PMID: 34663100 PMCID: PMC8524340 DOI: 10.1128/mbio.03068-20] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Cytokinin (CK) is an important plant developmental regulator, having activities in many aspects of plant life and response to the environment. CKs are involved in diverse processes in the plant, including stem cell maintenance, vascular differentiation, growth and branching of roots and shoots, leaf senescence, nutrient balance, and stress tolerance. In some cases, phytopathogens secrete CKs. It has been suggested that to achieve pathogenesis in the host, CK-secreting biotrophs manipulate CK signaling to regulate the host cell cycle and nutrient allocation. CK is known to induce host plant resistance to several classes of phytopathogens from a few works, with induced host immunity via salicylic acid signaling suggested to be the prevalent mechanism for this host resistance. Here, we show that CK directly inhibits the growth, development, and virulence of fungal phytopathogens. Focusing on Botrytis cinerea (Bc), we demonstrate that various aspects of fungal development can be reversibly inhibited by CK. We also found that CK affects both budding and fission yeast in a similar manner. Investigating the mechanism by which CK influences fungal development, we conducted RNA next-generation sequencing (RNA-NGS) on mock- and CK-treated B. cinerea samples, finding that CK alters the cell cycle, cytoskeleton, and endocytosis. Cell biology experiments demonstrated that CK affects cytoskeleton components and cellular trafficking in Bc, lowering endocytic rates and endomembrane compartment sizes, likely leading to reduced growth rates and arrested developmental programs. Mutant analyses in yeast confirmed that the endocytic pathway is altered by CK. Our work uncovers a remarkably conserved role for a plant growth hormone in fungal biology, suggesting that pathogen-host interactions resulted in fascinating molecular adaptations on fundamental processes in eukaryotic biology.
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Melo R, Armstrong V, Navarro F, Castro P, Mendoza L, Cotoras M. Characterization of the Fungitoxic Activity on Botrytis cinerea of N-phenyl-driman-9-carboxamides. J Fungi (Basel) 2021; 7:jof7110902. [PMID: 34829191 PMCID: PMC8623464 DOI: 10.3390/jof7110902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 10/22/2021] [Accepted: 10/22/2021] [Indexed: 11/16/2022] Open
Abstract
A total of 12 compounds were synthesized from the natural sesquiterpene (-) drimenol (compounds 4 to 15). The synthesized compounds corresponded to N-phenyl-driman-9-carboxamide derivatives, similar to some fungicides that inhibit the electron-transport chain. Their structures were characterized and confirmed by 1H NMR, 13C NMR spectroscopy, and mass spectrometry. Compounds 5 to 15 corresponded to novel compounds. The effect of the compounds on the mycelial growth of Botrytis cinerea was evaluated. Methoxylated and chlorinated compounds in the aromatic ring (compounds 6, 7, 12, and 13) exhibited the highest antifungal activity with IC50 values between 0.20 and 0.26 mM. On the other hand, the effect on conidial germination of B. cinerea of one methoxylated compound (6) and one chlorinated compound (7) was analyzed, and no inhibition was observed. Additionally, compound 7 decreased 36% the rate of oxygen consumption by germinating conidia.
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Affiliation(s)
- Ricardo Melo
- Núcleo de Química y Bioquímica, Facultad de Estudios Interdisciplinarios, Universidad Mayor, Santiago 8580745, Chile;
| | - Verónica Armstrong
- Departamento de Química Orgánica, Facultad de Química, Pontificia Universidad Católica de Chile, Santiago 7820436, Chile;
| | - Freddy Navarro
- Laboratorio de Micología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago 7820436, Chile; (F.N.); (P.C.)
| | - Paulo Castro
- Laboratorio de Micología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago 7820436, Chile; (F.N.); (P.C.)
| | - Leonora Mendoza
- Laboratorio de Micología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago 7820436, Chile; (F.N.); (P.C.)
- Correspondence: (L.M.); (M.C.)
| | - Milena Cotoras
- Laboratorio de Micología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago 7820436, Chile; (F.N.); (P.C.)
- Correspondence: (L.M.); (M.C.)
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206
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Development of Molecular Markers Associated with Resistance to Gray Mold Disease in Onion (Allium cepa L.) through RAPD-PCR and Transcriptome Analysis. HORTICULTURAE 2021. [DOI: 10.3390/horticulturae7110436] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Onions (Allium cepa L.) are one of the most consumed vegetable crops worldwide and are damaged by several fungal diseases in the field or during storage. Gray mold disease caused by the necrotrophic pathogens Botrytis cinerea and Botrytis squamosa is a disease that reduces the productivity and storage life in onions. However, it is difficult to control gray mold disease in onions by using physical and chemical methods. Breeding resistant onions against gray mold disease can reduce the damage caused by pathogens, reduce the labor required for control, and reduce environmental pollution caused by fungicides. However, onions have a large genome size (16Gb), making them difficult to analyze, and have a biennial cycle, resulting in a very long breeding period. Therefore, in this study, markers were developed to shorten the onion breeding period. First, random amplified polymorphic DNA (RAPD) was performed to confirm the genetic relationship between the gray mold disease-resistant and -susceptible lines through a dendrogram. In addition, the sequence characterized amplified region (SCAR)-OPAN1 marker to select resistant lines was developed using a polymorphic RAPD fragment. Second, the RNA-seq of the gray mold-resistant and -susceptible onion lines were analyzed using NGS technology. Using the RNA-seq results and DEG and GO analyses were performed, and the variants, such as SNPs and indels, were analyzed to develop a selectable marker for the resistant line. This study developed the SNP-3 HRM marker for selecting gray mold disease-resistant lines by using the SNPs present in the aldo-keto reductase (AKR) gene with high expression levels in these lines. The SCAR-OPAN1 and SNP-3 HRM markers developed in this study could be used to select gray mold disease-resistant onions in breeding programs to reduce the damage caused by gray mold disease.
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207
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De-Montijo-Prieto S, Razola-Díaz MDC, Gómez-Caravaca AM, Guerra-Hernandez EJ, Jiménez-Valera M, Garcia-Villanova B, Ruiz-Bravo A, Verardo V. Essential Oils from Fruit and Vegetables, Aromatic Herbs, and Spices: Composition, Antioxidant, and Antimicrobial Activities. BIOLOGY 2021; 10:1091. [PMID: 34827085 PMCID: PMC8615279 DOI: 10.3390/biology10111091] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Revised: 10/19/2021] [Accepted: 10/20/2021] [Indexed: 12/03/2022]
Abstract
In the field of food preservation, encapsulated Essential Oils (EOs) could be the best non-toxic and eco-friendly tool for food preservative applications substituting the chemicals ones that have several disadvantages for the environment and health. Thirteen commercial EOs from plants, fruits, and vegetables were characterized by GC-MS. The antioxidant activity was measured by DPPH and ABTS techniques. Antimicrobial activity was assessed by agar well-diffusion method and the Minimum Inhibitory Concentration (MIC) by agar dilution method against six bacteria, Candida albicans, and Botrytis cinerea. All the EOs tested have demonstrated antioxidant activity in the range of IC50 0.01-105.32 mg/mL. Between them, cinnamon EOs were the best, followed by oregano and thyme EOs. Fennel EO showed the lowest radical scavenging. MIC values ranged from 0.14 to 9 mg/mL. C. cassia, thyme, and oregano EOs were the most effective against the bacterial species tested, and the yeast C. albicans. On the contrary, citric fruit EOs showed low or no inhibition against most bacterial strains. The percentages of inhibition of mycelia growth of B. cinerea ranged from 3.4 to 98.5%. Thyme, oregano, mint, and fennel EOs showed the highest inhibition.
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Affiliation(s)
- Soumi De-Montijo-Prieto
- Department of Microbiology, Campus of Cartuja, University of Granada, 18071 Granada, Spain; (S.D.-M.-P.); (M.J.-V.); (A.R.-B.)
| | - María del Carmen Razola-Díaz
- Department of Nutrition and Food Science, Campus of Cartuja, University of Granada, 18071 Granada, Spain; (M.d.C.R.-D.); (E.J.G.-H.); (B.G.-V.); (V.V.)
- Institute of Nutrition and Food Technology ‘José Mataix’, Biomedical Research Center, University of Granada, Avda del Conocimiento sn., Armilla, 18100 Granada, Spain
| | - Ana María Gómez-Caravaca
- Department of Analytical Chemistry, Faculty of Sciences, University of Granada, Avd. Fuentenueva s/n., 18071 Granada, Spain
| | - Eduardo Jesús Guerra-Hernandez
- Department of Nutrition and Food Science, Campus of Cartuja, University of Granada, 18071 Granada, Spain; (M.d.C.R.-D.); (E.J.G.-H.); (B.G.-V.); (V.V.)
| | - María Jiménez-Valera
- Department of Microbiology, Campus of Cartuja, University of Granada, 18071 Granada, Spain; (S.D.-M.-P.); (M.J.-V.); (A.R.-B.)
| | - Belén Garcia-Villanova
- Department of Nutrition and Food Science, Campus of Cartuja, University of Granada, 18071 Granada, Spain; (M.d.C.R.-D.); (E.J.G.-H.); (B.G.-V.); (V.V.)
| | - Alfonso Ruiz-Bravo
- Department of Microbiology, Campus of Cartuja, University of Granada, 18071 Granada, Spain; (S.D.-M.-P.); (M.J.-V.); (A.R.-B.)
| | - Vito Verardo
- Department of Nutrition and Food Science, Campus of Cartuja, University of Granada, 18071 Granada, Spain; (M.d.C.R.-D.); (E.J.G.-H.); (B.G.-V.); (V.V.)
- Institute of Nutrition and Food Technology ‘José Mataix’, Biomedical Research Center, University of Granada, Avda del Conocimiento sn., Armilla, 18100 Granada, Spain
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208
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Fahim Abbas M, Batool S, Khaliq S, Mubeen S, Azziz-ud-Din, Ullah N, Zafar K, Rafiq M, Al-Sadi AM, Alotaibi SS, El-Shehawi AM, Li Y, Zuan ATK, Ansari MJ. Diversity of fungal pathogens associated with loquat and development of novel virulence scales. PLoS One 2021; 16:e0257951. [PMID: 34648523 PMCID: PMC8516230 DOI: 10.1371/journal.pone.0257951] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Accepted: 09/15/2021] [Indexed: 11/23/2022] Open
Abstract
Loquat [Eriobotrya japonica (Thunb.) Lindl.] is an important fruit crop in Pakistan; however, a constant decline in its production is noted due biotic and abiotic stresses, particularly disease infestation. Fungal pathogens are the major disease-causing agents; therefore, their identification is necessary for devising management options. This study explored Taxila, Wah-Cantt, Tret, Chatar, Murree, Kalar-Kahar, Choa-Saidan-Shah and Khan-Pur districts in the Punjab and Khyber Paktoon Khawa (KPK) provinces of Pakistan to explore the diversity of fungal pathogens associated with loquat. The samples were collected from these districts and their microscopic characterizations were accomplished for reliable identification. Alternaria alternata, Curvularia lunata, Lasiodiplodia theobromae, Aspergilus flavis, Botrytis cinerea, Chaetomium globosum, Pestalotiopsis mangiferae and Phomopsis sp. were the fungal pathogens infesting loquat in the study area. The isolates of A. alternata and C. lunata were isolated from leaf spots and fruit rot, while the isolates of L. theobromae were associated with twig dieback. The remaining pathogens were allied with fruit rot. The nucleotide evidence of internal transcribed spacer (ITS) regions (ITS1, 5.8S, and ITS2) were computed from all the pathogens and submitted in the database of National Center for Biotechnology Information (NCBI). For multigene analysis, beta-tubulin (BT) gene and glyceraldehyde 3-phosphate dehydrogenase (GAPDH) regions were explored for A. alternata and C. lunata isolates, respectively. The virulence scales of leaf spots, fruit rot, and twig dieback diseases of loquat were developed for the first time through this study. It is the first comprehensive study with morpho-molecular identification, and newly developed virulence scales of the fungal pathogens associated with loquat, which improves the understanding of these destructive diseases.
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Affiliation(s)
- Muhammad Fahim Abbas
- Department of Plant Pathology, Faculty of Agriculture, Lasbela University of Water Agriculture and Marine Sciences (LUAWMS) Uthal, Balochistan, Pakistan
| | - Sana Batool
- Department of Plant Pathology, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi, Pakistan
| | - Sobia Khaliq
- Department of Entomology, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi, Pakistan
| | - Sidra Mubeen
- Department of Chemistry, Kutchery Campus, The Women University Multan, Multan, Pakistan
| | - Azziz-ud-Din
- Department of Biotechnology and Genetic Engineering, Hazara University, Mansehra, Pakistan
| | - Naseeb Ullah
- Department of Biotechnology and Genetic Engineering, Hazara University, Mansehra, Pakistan
| | - Khalida Zafar
- Department of Botany, Islamia College, Peshawar, Pakistan
| | - Muhammad Rafiq
- Department of Plant Pathology, Faculty of Agriculture, University of the Punjab, Lahore, Pakistan
| | - Abdullah M. Al-Sadi
- Department of Plant Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, Alkhoud, Oman
| | - Saqer S. Alotaibi
- Department of Biotechnology, College of Science, Taif University, Taif, Saudi Arabia
| | - Ahmed M. El-Shehawi
- Department of Biotechnology, College of Science, Taif University, Taif, Saudi Arabia
| | - Yunzhou Li
- Department of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, Guizhou, China
| | - Ali Tan Kee Zuan
- Department of Land Management, Faculty of Agriculture, Universiti Putra Malaysia, Selangor, Malaysia
| | - Mohammad Javed Ansari
- Department of Botany, Hindu College Moradabad, Mahatma Jyotiba Phule Rohilkhand University Bareilly, Bareilly, India
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209
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Yang Z, Liu Q, Sun Y, Sun X, Chen L, Sun L, Gu W. Synthesis, Antifungal Activity, DFT Study and Molecular Dynamics Simulation of Novel 4-(1,2,4-Oxadiazol-3-yl)-N-(4-phenoxyphenyl)benzamide Derivatives. Chem Biodivers 2021; 18:e2100651. [PMID: 34626068 DOI: 10.1002/cbdv.202100651] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2021] [Accepted: 10/08/2021] [Indexed: 12/14/2022]
Abstract
In order to find novel potential antifungal agrochemicals, a series of new 4-(1,2,4-oxadiazol-3-yl)-N-(4-phenoxyphenyl)benzamide derivatives 3a-j were designed, synthesized and characterized by their 1 H-, 13 C-NMR and HRMS spectra. The preliminary antifungal assay in vitro revealed that compounds 3a-j exhibited moderate to good antifungal activity against five plant pathogenic fungi. Especially, compound 3e presented significant antifungal activity against Alternaria solani, Botrytis cinerea and Sclerotinia sclerotiorum, superior to positive control boscalid. In the in vivo antifungal assay on tomato plants and cucumber leaves, compound 3e presented good inhibition rate against B. cinerea at 200 mg/L. Molecular dynamics simulation revealed that compound 3e could bind with the active site of class II histone deacetylase (HDAC).
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Affiliation(s)
- Zihui Yang
- Jiangsu Provincial Key Lab for the Chemistry and Utilization of Agro-forest Biomass, Jiangsu Key Lab of Biomass-based Green Fuels, Chemicals, Co - Innovation Center for Efficient Processing and Utilization of Forest Products, College of Chemical Engineering, Nanjing Forestry University, Nanjing, 210037, P. R. China
| | - Qingsong Liu
- Jiangsu Provincial Key Lab for the Chemistry and Utilization of Agro-forest Biomass, Jiangsu Key Lab of Biomass-based Green Fuels, Chemicals, Co - Innovation Center for Efficient Processing and Utilization of Forest Products, College of Chemical Engineering, Nanjing Forestry University, Nanjing, 210037, P. R. China
| | - Yue Sun
- Jiangsu Provincial Key Lab for the Chemistry and Utilization of Agro-forest Biomass, Jiangsu Key Lab of Biomass-based Green Fuels, Chemicals, Co - Innovation Center for Efficient Processing and Utilization of Forest Products, College of Chemical Engineering, Nanjing Forestry University, Nanjing, 210037, P. R. China
| | - Xuebao Sun
- Jiangsu Provincial Key Lab for the Chemistry and Utilization of Agro-forest Biomass, Jiangsu Key Lab of Biomass-based Green Fuels, Chemicals, Co - Innovation Center for Efficient Processing and Utilization of Forest Products, College of Chemical Engineering, Nanjing Forestry University, Nanjing, 210037, P. R. China
| | - Linlin Chen
- Jiangsu Provincial Key Lab for the Chemistry and Utilization of Agro-forest Biomass, Jiangsu Key Lab of Biomass-based Green Fuels, Chemicals, Co - Innovation Center for Efficient Processing and Utilization of Forest Products, College of Chemical Engineering, Nanjing Forestry University, Nanjing, 210037, P. R. China
| | - Lu Sun
- Jiangsu Provincial Key Lab for the Chemistry and Utilization of Agro-forest Biomass, Jiangsu Key Lab of Biomass-based Green Fuels, Chemicals, Co - Innovation Center for Efficient Processing and Utilization of Forest Products, College of Chemical Engineering, Nanjing Forestry University, Nanjing, 210037, P. R. China
| | - Wen Gu
- Jiangsu Provincial Key Lab for the Chemistry and Utilization of Agro-forest Biomass, Jiangsu Key Lab of Biomass-based Green Fuels, Chemicals, Co - Innovation Center for Efficient Processing and Utilization of Forest Products, College of Chemical Engineering, Nanjing Forestry University, Nanjing, 210037, P. R. China
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210
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Li T, Chen G, Zhang Q. VvXYLP02 confers gray mold resistance by amplifying jasmonate signaling pathway in Vitis vinifera. PLANT SIGNALING & BEHAVIOR 2021; 16:1940019. [PMID: 34254885 PMCID: PMC8331025 DOI: 10.1080/15592324.2021.1940019] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2021] [Revised: 03/23/2021] [Accepted: 03/24/2021] [Indexed: 05/22/2023]
Abstract
Xylogen-like proteins (XYLPs) are essential for plant growth, development, and stress responses. However, little is known about the XYLP gene family in grape and its protective effects against gray mold a destructive disease caused by Botrytis cinerea. We identified and characterized six common XYLPs in the Vitis vinifera genome (VvXYLPs). VvXYLP expression pattern analyses with B. cinerea infection showed that VvXYLP02 was significantly up-regulated in the resistant genotype but down-regulated or only slightly up-regulated in the susceptible genotype. VvXYLP02 overexpression in Arabidopsis thaliana significantly increased resistance to B. cinerea, indicating that the candidate gene has functional importance. Furthermore, JA treatment significantly up-regulated VvXYLP02 expression in V. vinifera. JA-responsive genes were also up-regulated in VvXYLP02 overexpression lines in A. thaliana under B. cinerea inoculation. These findings suggest that VvXYLP02, which is induced by JA upon the pathogen infection, enhances JA dependent response to enforce plant resistance against gray mold disease.
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Affiliation(s)
- Tinggang Li
- Shandong Academy of Grape, Shandong Academy of Agricultural Sciences, Jinan, China
- CONTACT Li Tinggang Shandong Academy of Grape, Shandong Academy of Agricultural Sciences, No. 1-27, Shanda South Road, Jinan250100, China
| | - Guangxia Chen
- Shandong Academy of Grape, Shandong Academy of Agricultural Sciences, Jinan, China
| | - Qianqian Zhang
- Shandong Academy of Grape, Shandong Academy of Agricultural Sciences, Jinan, China
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Kamaruzzaman M, Islam MS, Hasan MA, Sultana R, Faruque MO, Jiang C. Characterization of a hypovirulent strain of Botrytis cinerea from apple and quantification of the ICs related gene expression. Mycol Prog 2021. [DOI: 10.1007/s11557-021-01737-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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212
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Gallé Á, Czékus Z, Tóth L, Galgóczy L, Poór P. Pest and disease management by red light. PLANT, CELL & ENVIRONMENT 2021; 44:3197-3210. [PMID: 34191305 DOI: 10.1111/pce.14142] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2021] [Revised: 06/22/2021] [Accepted: 06/25/2021] [Indexed: 05/22/2023]
Abstract
Light is essential for plant life. It provides a source of energy through photosynthesis and regulates plant growth and development and other cellular processes, such as by controlling the endogenous circadian clock. Light intensity, quality, duration and timing are all important determinants of plant responses, especially to biotic stress. Red light can positively influence plant defence mechanisms against different pathogens, but the molecular mechanism behind this phenomenon is not fully understood. Therefore, we reviewed the impact of red light on plant biotic stress responses against viruses, bacteria, fungi and nematodes, with a focus on the physiological effects of red light treatment and hormonal crosstalk under biotic stress in plants. We found evidence suggesting that exposing plants to red light increases levels of salicylic acid (SA) and induces SA signalling mediating the production of reactive oxygen species, with substantial differences between species and plant organs. Such changes in SA levels could be vital for plants to survive infections. Therefore, the application of red light provides a multidimensional aspect to developing innovative and environmentally friendly approaches to plant and crop disease management.
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Affiliation(s)
- Ágnes Gallé
- Department of Plant Biology, University of Szeged, Szeged, Hungary
| | - Zalán Czékus
- Department of Plant Biology, University of Szeged, Szeged, Hungary
| | - Liliána Tóth
- Department of Biotechnology, University of Szeged, Szeged, Hungary
- Institute of Plant Biology, Biological Research Centre, Eötvös Loránd Research Network, Szeged, Hungary
| | - László Galgóczy
- Department of Biotechnology, University of Szeged, Szeged, Hungary
- Institute of Plant Biology, Biological Research Centre, Eötvös Loránd Research Network, Szeged, Hungary
| | - Péter Poór
- Department of Plant Biology, University of Szeged, Szeged, Hungary
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213
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Zhang Y, Song R, Yuan H, Li T, Wang L, Lu K, Guo J, Liu W. Overexpressing the N-terminus of CATALASE2 enhances plant jasmonic acid biosynthesis and resistance to necrotrophic pathogen Botrytis cinerea B05.10. MOLECULAR PLANT PATHOLOGY 2021; 22:1226-1238. [PMID: 34247446 PMCID: PMC8435237 DOI: 10.1111/mpp.13106] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2021] [Revised: 06/16/2021] [Accepted: 06/16/2021] [Indexed: 05/31/2023]
Abstract
Salicylic acid (SA) acts antagonistically to jasmonic acid (JA) in plant immunity. We previously reported that CATALASE2 (CAT2) promotes JA-biosynthetic acyl-CoA oxidase (ACX) activity to enhance plant resistance to necrotrophic Botrytis cinerea, and SA represses JA biosynthesis through inhibiting CAT2 activity, while the underlying mechanism remains to be further elucidated. Here, we report that the truncated CAT2 N-terminus (CAT2-N) interacts with and promotes ACX2/3, and CAT2-N-overexpressing plants have increased JA accumulation and enhanced resistance to B. cinerea B05.10, but compromised antagonism of SA on JA. Catalase inhibitor treatment or mutating CAT2 active amino acids abolished CAT2 H2 O2 -decomposing activity but did not affect its promotion of ACX2/3 activity via interaction. CAT2-N, a truncated protein with no catalase activity, interacted with and promoted ACX2/3. Overexpressing CAT2-N in Arabidopsis plants resulted in increased ACX activity, higher JA accumulation, and stronger resistance to B. cinerea B05.10 infection. Additionally, SA dramatically repressed JA biosynthesis and resistance to B. cinerea in the wild type but not in the CAT2-N-overexpressing plants. Together, our study reveals that CAT2-N can be utilized as an accelerator for JA biosynthesis during plant resistance to B. cinerea B05.10, and this truncated protein partly relieves SA repression of JA biosynthesis in plant defence responses.
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Affiliation(s)
- Yu Zhang
- State Key Laboratory of Crop Stress Adaptation and ImprovementSchool of Life SciencesHenan UniversityKaifengChina
| | - Ru‐Feng Song
- State Key Laboratory of Crop Stress Adaptation and ImprovementSchool of Life SciencesHenan UniversityKaifengChina
| | - Hong‐Mei Yuan
- Hainan Key Laboratory for Sustainable Utilization of Tropical BioresourcesCollege of Tropical CropsHainan UniversityHaikouChina
| | - Ting‐Ting Li
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound ScreeningJiangsu Ocean UniversityLianyungangChina
| | - Lin‐Feng Wang
- State Key Laboratory of Crop Stress Adaptation and ImprovementSchool of Life SciencesHenan UniversityKaifengChina
| | - Kai‐Kai Lu
- State Key Laboratory of Crop Stress Adaptation and ImprovementSchool of Life SciencesHenan UniversityKaifengChina
| | - Jia‐Xing Guo
- State Key Laboratory of Crop Stress Adaptation and ImprovementSchool of Life SciencesHenan UniversityKaifengChina
| | - Wen‐Cheng Liu
- State Key Laboratory of Crop Stress Adaptation and ImprovementSchool of Life SciencesHenan UniversityKaifengChina
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214
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Wang LJ, Gao X, Jia GX. Stomata and ROS changes during Botrytis elliptica infection in diploid and tetraploid Lilium rosthornii Diels. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 167:366-375. [PMID: 34404007 DOI: 10.1016/j.plaphy.2021.08.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2021] [Revised: 08/03/2021] [Accepted: 08/05/2021] [Indexed: 06/13/2023]
Abstract
Polyploid plants often show improved resistance against many diseases, but whether they show increased resistance to grey mould, a devastating disease caused by Botrytis spp. fungi, is seldom reported. Stomata and reactive oxygen species (ROS) play dual roles in defence against grey mould, and it is unclear how their roles change after polyploidization. We addressed these questions in diploid and colchicine-induced Lilium rosthornii after B. elliptica infection. Tetraploids were less susceptible to grey mould, with lower morality rates in naturally infected plants. Before the stomata closed in artificially infected leaves, tetraploids, with larger stomatal apertures, were more easily invaded by the pathogen than diploids. However, the lesion area increased more slowly in tetraploids than in diploids, which may be explained by three causes based on histological and physiological characteristics. First, the pathogen required more time to penetrate the epidermis and closed stomata in tetraploids than in diploids. Second, the pathogen penetrated the reopened stomata more easily than the epidermis, and stomatal density was lower in tetraploids than in diploids. Third, tetraploids showed faster ROS accumulation, a more effective ROS-scavenging system and less malondialdehyde (MDA) accumulation than diploids. Stomatal starch and abnormal guard cell nuclei were present in the infected leaves. This phenomenon may be caused by oxalic acid, a pathogenic factor for many pathogens that promotes stomatal starch degradation and stomatal reopening in Sclerotinia spp., a pathogen closely related to Botrytis spp. This suggestion was primarily confirmed by immersing healthy leaves in oxalic acid solution.
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Affiliation(s)
- Lian-Juan Wang
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding, National Engineering Research Center for Floriculture, Beijing Laboratory of Urban and Rural Ecological Environment, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plant of Ministry of Education, School of Landscape Architecture, Beijing Forestry University, Beijing, 100083, China; Ningbo City College of Vocational Technology, Ningbo, Zhejiang, 315100, China
| | - Xue Gao
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding, National Engineering Research Center for Floriculture, Beijing Laboratory of Urban and Rural Ecological Environment, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plant of Ministry of Education, School of Landscape Architecture, Beijing Forestry University, Beijing, 100083, China
| | - Gui-Xia Jia
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding, National Engineering Research Center for Floriculture, Beijing Laboratory of Urban and Rural Ecological Environment, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plant of Ministry of Education, School of Landscape Architecture, Beijing Forestry University, Beijing, 100083, China.
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215
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Jiang M, Xu X, Song J, Li D, Han L, Sun X, Guo L, Xiang W, Zhao J, Wang X. Streptomyces botrytidirepellens sp. nov., a novel actinomycete with antifungal activity against Botrytis cinerea. Int J Syst Evol Microbiol 2021; 71. [PMID: 34520340 DOI: 10.1099/ijsem.0.005004] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The fungal pathogen Botrytis cinerea is the causal agent of devastating gray mold diseases in many economically important fruits, vegetables, and flowers, leading to serious economic losses worldwide. In this study, a novel actinomycete NEAU-LD23T exhibiting antifungal activity against B. cinerea was isolated, and its taxonomic position was evaluated using a polyphasic approach. Based on the genotypic, phenotypic and chemotaxonomic data, it is concluded that the strain represents a novel species within the genus Streptomyces, for which the name Streptomyces botrytidirepellens sp. nov. is proposed. The type strain is NEAU-LD23T (=CCTCC AA 2019029T=DSM 109824T). In addition, strain NEAU-LD23T showed a strong antagonistic effect against B. cinerea (82.6±2.5%) and varying degrees of inhibition on nine other phytopathogenic fungi. Both cell-free filtrate and methanol extract of mycelia of strain NEAU-LD23T significantly inhibited mycelial growth of B. cinerea. To preliminarily explore the antifungal mechanisms, the genome of strain NEAU-LD23T was sequenced and analyzed. AntiSMASH analysis led to the identification of several gene clusters responsible for the biosynthesis of bioactive secondary metabolites with antifungal activity, including 9-methylstreptimidone, echosides, anisomycin, coelichelin and desferrioxamine B. Overall, this research provided us an excellent strain with considerable potential to use for biological control of tomato gray mold.
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Affiliation(s)
- Mengqi Jiang
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China
| | - Xi Xu
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China
| | - Jia Song
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China
| | - Dongmei Li
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China
| | - Liyuan Han
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China
| | - Xiujun Sun
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China
| | - Lifeng Guo
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China
| | - Wensheng Xiang
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China.,State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, PR China
| | - Junwei Zhao
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China
| | - Xiangjing Wang
- Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, Xiangfang, Harbin 150030, PR China
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216
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Deletion of the Bcnrps1 Gene Increases the Pathogenicity of Botrytis cinerea and Reduces Its Tolerance to the Exogenous Toxic Substances Spermidine and Pyrimethanil. J Fungi (Basel) 2021; 7:jof7090721. [PMID: 34575759 PMCID: PMC8467525 DOI: 10.3390/jof7090721] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Revised: 08/27/2021] [Accepted: 08/31/2021] [Indexed: 11/17/2022] Open
Abstract
During the infection of grapevine (Vitis vinifera) by the fungus Botrytis cinerea, the concentration of polyamines, which are toxic substances for the phytopathogen, increases in the grape. Nine NRPS genes have been identified in the genome of B. cinerea, yet the function of five of them remains unknown. For this reason, we have studied the expression of the 9 NRPS genes by RT-qPCR in a medium supplemented with sublethal concentrations of three polyamines (1,3-diaminopropane (1,3-DAP), spermidine (SPD), and spermine (SPM)). Our results show that the presence of polyamines in the culture medium triggered the overexpression of the Bcnrps1 gene in the pathogen. Deleting Bcnrps1 did not affect mycelial growth or adaptation to osmotic stress, and we show that its expression is not essential for the cycle of infection of the B. cinerea. However, mutating the Bcnrps1 gene resulted in overexpression of the Bcnrps6 gene, which encodes for the excretion of siderophores of the coprogen family. Moreover, gene deletion has reduced the tolerance of B. cinerea B05.10 to toxic substances such as the polyamine SPD and the fungicide pyrimethanil, and its virulence has increased. Our findings provide new insights into the function of the Bcnrps1 gene and its involvement in the tolerance of B. cinerea against exogenous toxic compounds.
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217
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Xia X, Cheng X, Li R, Yao J, Li Z, Cheng Y. Advances in application of genome editing in tomato and recent development of genome editing technology. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2021; 134:2727-2747. [PMID: 34076729 PMCID: PMC8170064 DOI: 10.1007/s00122-021-03874-3] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Accepted: 05/25/2021] [Indexed: 05/07/2023]
Abstract
Genome editing, a revolutionary technology in molecular biology and represented by the CRISPR/Cas9 system, has become widely used in plants for characterizing gene function and crop improvement. Tomato, serving as an excellent model plant for fruit biology research and making a substantial nutritional contribution to the human diet, is one of the most important applied plants for genome editing. Using CRISPR/Cas9-mediated targeted mutagenesis, the re-evaluation of tomato genes essential for fruit ripening highlights that several aspects of fruit ripening should be reconsidered. Genome editing has also been applied in tomato breeding for improving fruit yield and quality, increasing stress resistance, accelerating the domestication of wild tomato, and recently customizing tomato cultivars for urban agriculture. In addition, genome editing is continuously innovating, and several new genome editing systems such as the recent prime editing, a breakthrough in precise genome editing, have recently been applied in plants. In this review, these advances in application of genome editing in tomato and recent development of genome editing technology are summarized, and their leaving important enlightenment to plant research and precision plant breeding is also discussed.
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Affiliation(s)
- Xuehan Xia
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, Chongqing, 401331, China
- Center of Plant Functional Genomics, Institute of Advanced Interdisciplinary Studies, Chongqing University, Chongqing, 401331, China
| | - Xinhua Cheng
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, Chongqing, 401331, China
- Center of Plant Functional Genomics, Institute of Advanced Interdisciplinary Studies, Chongqing University, Chongqing, 401331, China
| | - Rui Li
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, Chongqing, 401331, China
- Center of Plant Functional Genomics, Institute of Advanced Interdisciplinary Studies, Chongqing University, Chongqing, 401331, China
| | - Juanni Yao
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, Chongqing, 401331, China
| | - Zhengguo Li
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, Chongqing, 401331, China
- Center of Plant Functional Genomics, Institute of Advanced Interdisciplinary Studies, Chongqing University, Chongqing, 401331, China
| | - Yulin Cheng
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, Chongqing, 401331, China.
- Center of Plant Functional Genomics, Institute of Advanced Interdisciplinary Studies, Chongqing University, Chongqing, 401331, China.
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218
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Main diseases in postharvest blueberries, conventional and eco-friendly control methods: A review. Lebensm Wiss Technol 2021. [DOI: 10.1016/j.lwt.2021.112046] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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219
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Shu P, Zhang S, Li Y, Wang X, Yao L, Sheng J, Shen L. Over-expression of SlWRKY46 in tomato plants increases susceptibility to Botrytis cinerea by modulating ROS homeostasis and SA and JA signaling pathways. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 166:1-9. [PMID: 34087740 DOI: 10.1016/j.plaphy.2021.05.021] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2021] [Accepted: 05/16/2021] [Indexed: 06/12/2023]
Abstract
WRKY, as one of the largest families of transcription factors (TFs), binds to cis-acting elements of downstream genes to regulate biotic and abiotic stress. However, the role of SlWRKY46 in fungal disease response induced by Botrytis cinerea (B.cinerea) and potential mechanism remains obscure. To ascertain the role of SlWRKY46 in response to B.cinerea, we constructed SlWRKY46-overexpression plants, which were then inoculated with B.cinerea. SlWRKY46-overexpression plants were more susceptible to B.cinerea and accompanied by the inhibited activities of phenylalanine ammonialyase (PAL), polyphenol oxidase (PPO), chitinase (CHI), and β-1,3-glucanase (GLU). Additionally, SlWRKY46-overexpression plants showed the decreased activities of ascorbate peroxidase (APX), superoxide dismutase (SOD) and the content of H2O2, and the increased content of O2•-. Moreover, over-expression of SlWRKY46 suppressed the salicylic acid (SA) and jasmonic acid (JA) marker genes, pathogenesis related protein (PR1), and proteinase inhibitors (PI Ⅰ and PI Ⅱ) and consequently aggravated the disease symptoms. Therefore, we speculated that SlWRKY46 played negative regulatory roles in B. cinerea infection probably by inhibiting the activities of antioxidants and disease resistance enzymes, regulating SA and JA signaling pathways and modulating reactive oxygen (ROS) homeostasis.
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Affiliation(s)
- Pan Shu
- College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China
| | - Shujuan Zhang
- College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China
| | - Yujing Li
- College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China
| | - Xinyu Wang
- College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China
| | - Lan Yao
- College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China
| | - Jiping Sheng
- School of Agricultural Economics and Rural Development, Renmin University of China, Beijing, 100872, China
| | - Lin Shen
- College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China.
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220
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Lin X, Li Y, Zhong W, Hong T, Li L, Song S, He D. Synthesis, Bioactivity, and QSAR Study of 3,4-Dichlorophenyl Isoxazole-Substituted Stilbene Derivatives against the Phytopathogenic Fungus Botrytis cinerea. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:9520-9528. [PMID: 34382783 DOI: 10.1021/acs.jafc.1c01816] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Gray mold, caused by Botrytis cinerea, is one of the most destructive fungal diseases in crops, responsible for significant economic losses. In search of natural product-based fungicides, we designed and synthesized a series of novel 3,4-dichlorophenyl isoxazole-substituted stilbene derivatives, and their in vivo antifungal activities against B. cinerea were evaluated. The results indicated that some of the target molecules demonstrated remarkable efficiency for the control of tomato gray mold. In particular, compound 5r displayed the highest fungicidal potency with an inhibition rate of 56.11% comparable to that of positive control boscalid (66.96%). Moreover, a hologram quantitative structure-activity relationship (HQSAR) model with good predictive capability was developed to provide in-depth insight into the activity profiles of these compounds. Preliminary mechanism studies suggested that compound 5r might exert its antifungal effect by changing hyphal morphology and increasing the membrane permeability. The present study contributes to the development of natural stilbene derivatives as alternative bioactive agents against B. cinerea.
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Affiliation(s)
- Xingdong Lin
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, Guangdong 510640, People's Republic of China
| | - Yan Li
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, Guangdong 510640, People's Republic of China
| | - Weiqiang Zhong
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, Guangdong 510640, People's Republic of China
| | - Tian Hong
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, Guangdong 510640, People's Republic of China
| | - Lihuang Li
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, Guangdong 510640, People's Republic of China
| | - Shaoyun Song
- State Key Laboratory of Biocontrol, Sun Yat-sen University, Guangzhou, Guangdong 510006, People's Republic of China
| | - Daohang He
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, Guangdong 510640, People's Republic of China
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221
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Qiao Y, Xia R, Zhai J, Hou Y, Feng L, Zhai Y, Ma W. Small RNAs in Plant Immunity and Virulence of Filamentous Pathogens. ANNUAL REVIEW OF PHYTOPATHOLOGY 2021; 59:265-288. [PMID: 34077241 DOI: 10.1146/annurev-phyto-121520-023514] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Gene silencing guided by small RNAs governs a broad range of cellular processes in eukaryotes. Small RNAs are important components of plant immunity because they contribute to pathogen-triggered transcription reprogramming and directly target pathogen RNAs. Recent research suggests that silencing of pathogen genes by plant small RNAs occurs not only during viral infection but also in nonviral pathogens through a process termed host-induced gene silencing, which involves trans-species small RNA trafficking. Similarly, small RNAs are also produced by eukaryotic pathogens and regulate virulence. This review summarizes the small RNA pathways in both plants and filamentous pathogens, including fungi and oomycetes, and discusses their role in host-pathogen interactions. We highlight secondarysmall interfering RNAs of plants as regulators of immune receptor gene expression and executors of host-induced gene silencing in invading pathogens. The current status and prospects of trans-species gene silencing at the host-pathogen interface are discussed.
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Affiliation(s)
- Yongli Qiao
- Shanghai Key Laboratory of Plant Molecular Sciences, College of Life Sciences, Shanghai Normal University, Shanghai 200234, China;
| | - Rui Xia
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Horticulture, South China Agricultural University, Guangzhou 510640, China
| | - Jixian Zhai
- School of Life Sciences, Institute of Plant and Food Science, Southern University of Science and Technology, Shenzhen 518055, China
| | - Yingnan Hou
- Department of Microbiology and Plant Pathology, University of California, Riverside, California 92521, USA
| | - Li Feng
- School of Life Sciences, Institute of Plant and Food Science, Southern University of Science and Technology, Shenzhen 518055, China
| | - Yi Zhai
- Department of Microbiology and Plant Pathology, University of California, Riverside, California 92521, USA
| | - Wenbo Ma
- Department of Microbiology and Plant Pathology, University of California, Riverside, California 92521, USA
- The Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK;
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222
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Antifungal compound, methyl hippurate from Bacillus velezensis CE 100 and its inhibitory effect on growth of Botrytis cinerea. World J Microbiol Biotechnol 2021; 37:159. [PMID: 34420104 DOI: 10.1007/s11274-021-03046-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2020] [Accepted: 03/30/2021] [Indexed: 10/20/2022]
Abstract
Botrytis cinerea, the causal agent of gray mold is one of the major devastating fungal pathogens that occurs in strawberry cultivation and leads to massive losses. Due to the rapid emergence of resistant strains in recent years, an ecofriendly disease management strategy needs to be developed to control this aggressive pathogen. Bacillus velezensis CE 100 exhibited strong antagonistic activity with 53.05% against B. cinerea by dual culture method. In the present study, 50% of culture filtrate supplemented into PDA medium absolutely inhibited mycelial growth of B. cinerea whereas the highest concentration (960 mg/L) of different crude extracts including ethyl acetate, chloroform, and n-butanol crude extracts of B. velezensis CE 100, strongly inhibited mycelial growth of B. cinerea with the highest inhibition of 79.26%, 70.21% and 69.59% respectively, resulting in severe damage to hyphal structures with bulging and swellings. Hence, the antifungal compound responsible was progressively separated from ethyl acetate crude extract using medium pressure liquid chromatography. The purified compound was identified as methyl hippurate by nuclear magnetic resonance and mass spectrometry. The inhibitory effect of methyl hippurate on both spore germination and mycelial growth of B. cinerea was revealed by its dose-dependent pattern. The spore germination rate was completely restricted at a concentration of 3 mg/mL of methyl hippurate whereas no mycelial growth was observed in agar medium supplemented with 4 mg/mL and 6 mg/mL of methyl hippurate by poisoned food method. Microscopic imaging revealed that the morphologies of spores were severely altered by long-time exposure to methyl hippurate at concentrations of 1 mg/mL, 2 mg/mL and 3 mg/mL and hyphae of B. cinerea were severely deformed by exposure to methyl hippurate at concentrations of 2 mg/mL, 4 mg/mL and 6 mg/mL. No significant inhibition on tomato seed germination was observed in treatments with methyl hippurate (2 mg/mL) for both 6 h and 12 h soaking period as compared to the controls. Based on these results, B. velezensis CE 100 could be considered a potential agent for development of environmentally friendly disease control strategies as a consequence of the synergetic interactions of diverse crude metabolites and methyl hippurate.
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223
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Li Y, Li S, Du R, Wang J, Li H, Xie D, Yan J. Isoleucine Enhances Plant Resistance Against Botrytis cinerea via Jasmonate Signaling Pathway. FRONTIERS IN PLANT SCIENCE 2021; 12:628328. [PMID: 34489985 PMCID: PMC8416682 DOI: 10.3389/fpls.2021.628328] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2020] [Accepted: 07/23/2021] [Indexed: 05/27/2023]
Abstract
Amino acids are the building blocks of biomacromolecules in organisms, among which isoleucine (Ile) is the precursor of JA-Ile, an active molecule of phytohormone jasmonate (JA). JA is essential for diverse plant defense responses against biotic and abiotic stresses. Botrytis cinerea is a necrotrophic nutritional fungal pathogen that causes the second most severe plant fungal disease worldwide and infects more than 200 kinds of monocot and dicot plant species. In this study, we demonstrated that Ile application enhances plant resistance against B. cinerea in Arabidopsis, which is dependent on the JA receptor COI1 and the jasmonic acid-amido synthetase JAR1. The mutant lib with higher Ile content in leaves exhibits enhanced resistance to B. cinerea infection. Furthermore, we found that the exogenous Ile application moderately enhanced plant resistance to B. cinerea in various horticultural plant species, including lettuce, rose, and strawberry, suggesting a practical and effective strategy to control B. cinerea disease in agriculture. These results together showed that the increase of Ile could positively regulate the resistance of various plants to B. cinerea by enhancing JA signaling, which would offer potential applications for crop protection.
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Affiliation(s)
- Yuwen Li
- Tsinghua-Peking Center for Life Science, and MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing, China
| | - Suhua Li
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
- Shenzhen Key Laboratory of Agricultural Synthetic Biology, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
| | - Ran Du
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
- Shenzhen Key Laboratory of Agricultural Synthetic Biology, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
| | - Jiaojiao Wang
- Tsinghua-Peking Center for Life Science, and MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing, China
| | - Haiou Li
- Tsinghua-Peking Center for Life Science, and MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing, China
- Hunan Provincial Key Laboratory of Phytohormones and Growth Development, College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, China
| | - Daoxin Xie
- Tsinghua-Peking Center for Life Science, and MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing, China
| | - Jianbin Yan
- Tsinghua-Peking Center for Life Science, and MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing, China
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
- Shenzhen Key Laboratory of Agricultural Synthetic Biology, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
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Li H, James A, Shen X, Wang Y. Roles of microbiota in the formation of botrytized grapes and wines. CYTA - JOURNAL OF FOOD 2021. [DOI: 10.1080/19476337.2021.1958925] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Hua Li
- Beijing Advanced Innovation Center For Food Nutrition And Human Health, Beijing Technology & Business University (BTBU), Beijing, P.R. China
| | - Armachius James
- Beijing Advanced Innovation Center For Food Nutrition And Human Health, Beijing Technology & Business University (BTBU), Beijing, P.R. China
| | - Xuemei Shen
- Beijing Advanced Innovation Center For Food Nutrition And Human Health, Beijing Technology & Business University (BTBU), Beijing, P.R. China
| | - Yousheng Wang
- Beijing Advanced Innovation Center For Food Nutrition And Human Health, Beijing Technology & Business University (BTBU), Beijing, P.R. China
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225
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Zhang Z, He C, Chen Y, Li B, Tian S. DNA Methyltransferases Regulate Pathogenicity of Botrytis cinerea to Horticultural Crops. J Fungi (Basel) 2021; 7:jof7080659. [PMID: 34436198 PMCID: PMC8399656 DOI: 10.3390/jof7080659] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Revised: 08/05/2021] [Accepted: 08/09/2021] [Indexed: 11/18/2022] Open
Abstract
Botrytis cinerea is one of the most destructive fungal pathogens that cause gray mold rot in horticultural products, including fresh fruits, vegetables, and flowers, leading to serious economic losses. B. cinerea is difficult to control because it has strong stress resistance and complex infection modes. The pathogenic mechanisms of B. cinerea have been revealed at multiple levels, but little is known at the epigenetic level. In this study, we first revealed the important role of DNA methyltransferases in regulating the development and pathogenicity of B. cinerea. We showed that two DNA methyltransferases, BcDIM2 and BcRID2, showed a strong synergistic effect in regulating the pathogenicity of B. cinerea. The double knockout mutant ΔBcdim2rid2 showed slower mycelial growth, lower spore germination, attenuated oxidative tolerance, and complete pathogenicity loss on various hosts, which is related to the reduced expression of virulence-related genes in ΔBcdim2rid2 and the induced resistance of the host. Although B. cinerea has multiple DNA methyltransferases, the global methylation level is very low, and few 5mC sites can be detected by BS-seq. These results first revealed the important role and the action mode of DNA methyltransferases in B. cinerea.
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Affiliation(s)
- Zhanquan Zhang
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; (Z.Z.); (C.H.); (Y.C.); (B.L.)
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Chang He
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; (Z.Z.); (C.H.); (Y.C.); (B.L.)
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yong Chen
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; (Z.Z.); (C.H.); (Y.C.); (B.L.)
| | - Boqiang Li
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; (Z.Z.); (C.H.); (Y.C.); (B.L.)
| | - Shiping Tian
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; (Z.Z.); (C.H.); (Y.C.); (B.L.)
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
- Correspondence:
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226
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Wang Y, Qiao Y, Zhang M, Ma Z, Xue Y, Mi Q, Wang A, Feng J. Potential value of small-molecule organic acids for the control of postharvest gray mold caused by Botrytis cinerea. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2021; 177:104884. [PMID: 34301352 DOI: 10.1016/j.pestbp.2021.104884] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Revised: 05/18/2021] [Accepted: 05/22/2021] [Indexed: 06/13/2023]
Abstract
In the present study, a total of 21 natural or synthetic small-molecule organic acids were selected and determined for their activity against postharvest gray mold caused by B. cinerea. Overall, cuminic acid, which was extracted from the seed of Cuminum cyminum L, showed the most promising antifungal activity against B. cinerea both in vitro and in vivo. The study on action mechanism showed that cuminic acid could inhibit the development of sclerotia and the secretion of oxalic acid, destroy the cell membrane integrity, and down regulate the expression of several key genes involved in sclerotia development and pathogenicity of B. cinerea. Furthermore, cuminic acid could potentially reduce the degradation of TSS and TA content, while it had no significant effect on the weight loss, firmness, and VC content of apple and tomato. Importantly, cuminic acid could enhance the antioxidant enzyme activities of the fruits. All these results demonstrate the antifungal activity and highlight the great potential of cuminic acid as an alternative environmental-friendly agent for the control of postharvest gray mold both on fruits and vegetables.
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Affiliation(s)
- Yong Wang
- College of plant protection, Northwest A&F University, Yangling 712100, Shaanxi, China; Shaanxi Research Center of Biopesticide Engineering & Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Yonghui Qiao
- College of plant protection, Northwest A&F University, Yangling 712100, Shaanxi, China; Shaanxi Research Center of Biopesticide Engineering & Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Mengwei Zhang
- College of plant protection, Northwest A&F University, Yangling 712100, Shaanxi, China; Shaanxi Research Center of Biopesticide Engineering & Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Zhiqing Ma
- College of plant protection, Northwest A&F University, Yangling 712100, Shaanxi, China; Shaanxi Research Center of Biopesticide Engineering & Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Yuanji Xue
- College of plant protection, Northwest A&F University, Yangling 712100, Shaanxi, China; Shaanxi Research Center of Biopesticide Engineering & Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Qianqian Mi
- College of plant protection, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Aling Wang
- College of plant protection, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Juntao Feng
- College of plant protection, Northwest A&F University, Yangling 712100, Shaanxi, China; Shaanxi Research Center of Biopesticide Engineering & Technology, Northwest A&F University, Yangling 712100, Shaanxi, China.
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227
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Prasannath K, Galea VJ, Akinsanmi OA. Influence of climatic factors on dry flower, grey and green mould diseases of macadamia flowers in Australia. J Appl Microbiol 2021; 132:1291-1306. [PMID: 34319639 DOI: 10.1111/jam.15241] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2021] [Revised: 06/23/2021] [Accepted: 07/26/2021] [Indexed: 11/29/2022]
Abstract
AIMS Flower blights (grey mould, green mould and dry flower) are important diseases of macadamia. Lack of information on pathogen biology and disease epidemiology in macadamia has hampered control options. Effects of climatic variables including temperature, relative humidity (RH) and vapour pressure deficit (VPD) on the abundance, germination and growth of conidia of four fungal pathogens that cause various flower blights in macadamia were studied. METHODS AND RESULTS Mycelial growth, sporulation, conidial germination and germ tube growth for five isolates each of Botrytis cinerea, Cladosporium cladosporioides, Pestalotiopsis macadamiae and Neopestalotiopsis macadamiae, at eight temperatures, seven RH and the corresponding VPD regimes were determined in vitro. The optimal climatic range of each of the four pathogens was validated during macadamia flowering periods in the 2019 and 2020 seasons by conidia detected and quantified using quantitative PCR. Several growth models were fitted to the data with high significance; predicted optima from these models ranged from 0.9 to 1.1 kPa VPD for P. macadamiae and N. macadamiae and <0.6 kPa VPD for B. cinerea and C. cladosporioides. CONCLUSIONS This study showed that VPD, as a determinant of the fecundity and growth of the four fungal pathogens, was predictive of flower blight incidence in macadamia. The importance of temperature, RH and, thus, VPD for defining the conditions for infection and flower blight epidemics was established. SIGNIFICANCE AND IMPACT OF THE STUDY This information provides a firm basis for the development of prediction tools for flower blights in macadamia.
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Affiliation(s)
- Kandeeparoopan Prasannath
- Centre for Horticultural Science, Queensland Alliance for Agriculture & Food Innovation, The University of Queensland, Dutton Park, Queensland, Australia
| | - Victor J Galea
- School of Agriculture & Food Sciences, The University of Queensland, Gatton, Queensland, Australia
| | - Olufemi A Akinsanmi
- Centre for Horticultural Science, Queensland Alliance for Agriculture & Food Innovation, The University of Queensland, Dutton Park, Queensland, Australia
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228
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Fragola M, Perrone MR, Alifano P, Talà A, Romano S. Seasonal Variability of the Airborne Eukaryotic Community Structure at a Coastal Site of the Central Mediterranean. Toxins (Basel) 2021; 13:518. [PMID: 34437389 PMCID: PMC8402549 DOI: 10.3390/toxins13080518] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Revised: 07/19/2021] [Accepted: 07/20/2021] [Indexed: 12/23/2022] Open
Abstract
The atmosphere represents an underexplored temporary habitat for airborne microbial communities such as eukaryotes, whose taxonomic structure changes across different locations and/or regions as a function of both survival conditions and sources. A preliminary dataset on the seasonal dependence of the airborne eukaryotic community biodiversity, detected in PM10 samples collected from July 2018 to June 2019 at a coastal site representative of the Central Mediterranean, is provided in this study. Viridiplantae and Fungi were the most abundant eukaryotic kingdoms. Streptophyta was the prevailing Viridiplantae phylum, whilst Ascomycota and Basidiomycota were the prevailing Fungi phyla. Brassica and Panicum were the most abundant Streptophyta genera in winter and summer, respectively, whereas Olea was the most abundant genus in spring and autumn. With regards to Fungi, Botrytis and Colletotrichum were the most abundant Ascomycota genera, reaching the highest abundance in spring and summer, respectively, while Cryptococcus and Ustilago were the most abundant Basidiomycota genera, and reached the highest abundance in winter and spring, respectively. The genus community structure in the PM10 samples varied day-by-day, and mainly along with the seasons. The impact of long-range transported air masses on the same structure was also proven. Nevertheless, rather few genera were significantly correlated with meteorological parameters and PM10 mass concentrations. The PCoA plots and non-parametric Spearman's rank-order correlation coefficients showed that the strongest correlations generally occurred between parameters reaching high abundances/values in the same season or PM10 sample. Moreover, the screening of potential pathogenic fungi allowed us to detect seven potential pathogenic genera in our PM10 samples. We also found that, with the exception of Panicum and Physcomitrella, all of the most abundant and pervasive identified Streptophyta genera could serve as potential sources of aeroallergens in the studied area.
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Affiliation(s)
- Mattia Fragola
- Department of Mathematics and Physics, University of Salento, Via per Arnesano, 73100 Lecce, Italy; (M.F.); (M.R.P.)
| | - Maria Rita Perrone
- Department of Mathematics and Physics, University of Salento, Via per Arnesano, 73100 Lecce, Italy; (M.F.); (M.R.P.)
| | - Pietro Alifano
- Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Monteroni, 73100 Lecce, Italy; (P.A.); (A.T.)
| | - Adelfia Talà
- Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Monteroni, 73100 Lecce, Italy; (P.A.); (A.T.)
| | - Salvatore Romano
- Department of Mathematics and Physics, University of Salento, Via per Arnesano, 73100 Lecce, Italy; (M.F.); (M.R.P.)
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229
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Mewa Ngongang M, Du Plessis H, Boredi C, Hutchinson U, Ntwampe K, Okudoh V, Jolly N. Physiological and Antagonistic Properties of Pichia kluyveri for Curative and Preventive Treatments Against Post-Harvest Fruit Fungi. POL J FOOD NUTR SCI 2021. [DOI: 10.31883/pjfns/139278] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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230
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Derbyshire MC, Harper LA, Lopez-Ruiz FJ. Positive Selection of Transcription Factors Is a Prominent Feature of the Evolution of a Plant Pathogenic Genus Originating in the Miocene. Genome Biol Evol 2021; 13:6325025. [PMID: 34289036 PMCID: PMC8379374 DOI: 10.1093/gbe/evab167] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/12/2021] [Indexed: 01/18/2023] Open
Abstract
Tests based on the dN/dS statistic are used to identify positive selection of nonsynonymous polymorphisms. Using these tests on alignments of all orthologs from related species can provide insights into which gene categories have been most frequently positively selected. However, longer alignments have more power to detect positive selection, creating a detection bias that could create misleading results from functional enrichment tests. Most studies of positive selection in plant pathogens focus on genes with specific virulence functions, with little emphasis on broader molecular processes. Furthermore, no studies in plant pathogens have accounted for detection bias due to alignment length when performing functional enrichment tests. To address these research gaps, we analyze 12 genomes of the phytopathogenic fungal genus Botrytis, including two sequenced in this study. To establish a temporal context, we estimated fossil-calibrated divergence times for the genus. We find that Botrytis likely originated 16–18 Ma in the Miocene and underwent continuous radiation ending in the Pliocene. An untargeted scan of Botrytis single-copy orthologs for positive selection with three different statistical tests uncovered evidence for positive selection among proteases, signaling proteins, CAZymes, and secreted proteins. There was also a strong overrepresentation of transcription factors among positively selected genes. This overrepresentation was still apparent after two complementary controls for detection bias due to sequence length. Positively selected sites were depleted within DNA-binding domains, suggesting changes in transcriptional responses to internal and external cues or protein–protein interactions have undergone positive selection more frequently than changes in promoter fidelity.
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Affiliation(s)
- Mark C Derbyshire
- Centre for Crop and Disease Management, Curtin University, Perth, Western Australia, Australia
| | - Lincoln A Harper
- Centre for Crop and Disease Management, Curtin University, Perth, Western Australia, Australia
| | - Francisco J Lopez-Ruiz
- Centre for Crop and Disease Management, Curtin University, Perth, Western Australia, Australia
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231
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Wang CY, Lou XY, Cai Z, Zhang MZ, Jia C, Qin JC, Yang YW. Supramolecular Nanoplatform Based on Mesoporous Silica Nanocarriers and Pillararene Nanogates for Fungus Control. ACS APPLIED MATERIALS & INTERFACES 2021; 13:32295-32306. [PMID: 34196538 DOI: 10.1021/acsami.1c08582] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Synthetic fungicides have been widely used to protect crops from fungal diseases. However, excessive use of synthetic fungicides leads to the generation of fungicide resistance in fungal pathogens. Recently, smart cargo delivery systems have been introduced for the construction of a pesticide delivery nanoplatform, benefiting from their controlled release performance. Herein, a fungal pathogen microenvironment-responsive supramolecular fungicide nanoplatform has been designed and constructed, using quaternary ammonium salt (Q)-modified mesoporous silica nanoparticles (MSN-Q NPs) as nanocarriers loaded with berberine hydrochloride (BH) and carboxylatopillar[5]arene (CP[5]A) as nanogates to form BH-loaded CP[5]A@MSN-Q NPs for effective inhibition of Botrytis cinerea. CP[5]A as nanogates can endow the fungicide nanoplatform with pH stimuli-responsive release features for the control of fungicide release. The loaded BH, as a natural plant fungicide, provides an ecofriendly alternative to synthetic fungicides for controlling B. cinerea. Interestingly, we use oxalic acid (OA) secreted by B. cinerea as a trigger so that BH can be released from the fungicide nanoplatform on demand under pathogen microenvironments for controlling B. cinerea. The experimental results indicate that the fabricated fungicide nanoplatform could effectively inhibit the mycelial growth and spore germination, providing a new way for the management of B. cinerea in actual application.
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Affiliation(s)
- Chao-Yi Wang
- College of Chemistry and College of Plant Science, Jilin University, Changchun 130012, P. R. China
| | - Xin-Yue Lou
- College of Chemistry, Jilin University, 2699 Qianjin Street, Changchun 130012, P. R. China
| | - Zhi Cai
- College of Chemistry, Jilin University, 2699 Qianjin Street, Changchun 130012, P. R. China
| | - Ming-Zhe Zhang
- College of Plant Science, Jilin University, Changchun 130012, P. R. China
| | - Chengguo Jia
- College of Plant Science, Jilin University, Changchun 130012, P. R. China
| | - Jian-Chun Qin
- College of Plant Science, Jilin University, Changchun 130012, P. R. China
| | - Ying-Wei Yang
- College of Chemistry, Jilin University, 2699 Qianjin Street, Changchun 130012, P. R. China
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232
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Application of plant natural products for the management of postharvest diseases in fruits. FOLIA HORTICULTURAE 2021. [DOI: 10.2478/fhort-2021-0016] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Abstract
Prevention of postharvest losses has been a very important concern in the scientific world for many centuries, since adoption of an effective means to curtail such losses is believed to help in reaching sustainability in horticultural production and prevention of hunger around the world. The main means of deterioration in fruits, which may occur after harvest, include physiological changes/losses, physical losses, biochemical changes, changes in enzymatic activities and pathological deterioration. Among these, diseases cover the most important part; the losses due to diseases range from 5% to 20%, and this figure may extend up to >50% in the cases of certain susceptible cultivars. Fungicides have been the most important tool for the management of postharvest diseases for many years, together with hygiene, cold storage and packaging. However, due to the scientifically confirmed hazards of agro-chemicals on environment and human health, the acceptability of agro-chemicals decreased and scientists turned their attention towards natural alternatives. Most tropical and subtropical fruits contain a superficial cuticle, which helps them to regulate respiration and transpiration and protects against microbial decay. However, the waxy cuticle is generally being removed or damaged during washing or other handling practices. Therefore, the application of protective coatings (including wax) has been used in the fruit industry since the twelfth century, against microbial decay and for maintaining an acceptable standard of postharvest quality. This review aims to summarise and discuss the main natural products used for this purpose, to provide a broad-in-scope guide to farmers and the fruit storage sector.
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233
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Khalifa ME, MacDiarmid RM. A Mechanically Transmitted DNA Mycovirus Is Targeted by the Defence Machinery of Its Host, Botrytis cinerea. Viruses 2021; 13:v13071315. [PMID: 34372522 PMCID: PMC8309985 DOI: 10.3390/v13071315] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Revised: 07/03/2021] [Accepted: 07/05/2021] [Indexed: 12/11/2022] Open
Abstract
Eukaryotic circular single-stranded DNA (ssDNA) viruses were known only to infect plants and vertebrates until the discovery of the isolated DNA mycovirus from the fungus Sclerotinia sclerotiorum. Similar viral sequences were reported from several other sources and classified in ten genera within the Genomoviridae family. The current study reports two circular ssDNA mycoviruses isolated from the phytopathogen Botrytis cinerea, and their assignment to a newly created genus tentatively named Gemydayirivirus. The mycoviruses, tentatively named botrytis gemydayirivirus 1 (BGDaV1) and BGDaV2, are 1701 and 1693 nt long and encode three and two open reading frames (ORFs), respectively. Of the predicted ORFs, only ORF I, which codes for a replication initiation protein (Rep), shared identity with other proteins in GenBank. BGDaV1 is infective as cell-free purified particles and confers hypovirulence on its natural host. Investigation revealed that BGDaV1 is a target for RNA silencing and genomic DNA methylation, keeping the virus at very low titre. The discovery of BGDaV1 expands our knowledge of the diversity of genomoviruses and their interaction with fungal hosts.
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Affiliation(s)
- Mahmoud E. Khalifa
- The New Zealand Institute for Plant and Food Research Limited, Auckland 1025, New Zealand;
- Botany and Microbiology Department, Faculty of Science, Damietta University, Damietta 34517, Egypt
- Correspondence:
| | - Robin M. MacDiarmid
- The New Zealand Institute for Plant and Food Research Limited, Auckland 1025, New Zealand;
- School of Biological Sciences, The University of Auckland, Auckland 1010, New Zealand
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234
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Using RNA-Sequencing Data to Examine Tissue-Specific Garlic Microbiomes. Int J Mol Sci 2021; 22:ijms22136791. [PMID: 34202675 PMCID: PMC8268838 DOI: 10.3390/ijms22136791] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2021] [Revised: 06/16/2021] [Accepted: 06/21/2021] [Indexed: 12/30/2022] Open
Abstract
Garlic (Allium sativum) is a perennial bulbous plant. Due to its clonal propagation, various diseases threaten the yield and quality of garlic. In this study, we conducted in silico analysis to identify microorganisms, bacteria, fungi, and viruses in six different tissues using garlic RNA-sequencing data. The number of identified microbial species was the highest in inflorescences, followed by flowers and bulb cloves. With the Kraken2 tool, 57% of identified microbial reads were assigned to bacteria and 41% were assigned to viruses. Fungi only made up 1% of microbial reads. At the species level, Streptomyces lividans was the most dominant bacteria while Fusarium pseudograminearum was the most abundant fungi. Several allexiviruses were identified. Of them, the most abundant virus was garlic virus C followed by shallot virus X. We obtained a total of 14 viral genome sequences for four allexiviruses. As we expected, the microbial community varied depending on the tissue types, although there was a dominant microorganism in each tissue. In addition, we found that Kraken2 was a very powerful and efficient tool for the bacteria using RNA-sequencing data with some limitations for virome study.
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235
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Ha STT, Kim YT, Jeon YH, Choi HW, In BC. Regulation of Botrytis cinerea Infection and Gene Expression in Cut Roses by Using Nano Silver and Salicylic Acid. PLANTS (BASEL, SWITZERLAND) 2021; 10:1241. [PMID: 34207351 PMCID: PMC8235549 DOI: 10.3390/plants10061241] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Revised: 06/05/2021] [Accepted: 06/16/2021] [Indexed: 10/30/2022]
Abstract
Botrytis cinerea (B. cinerea) is one of the necrotrophic pathogens resulting in the heaviest commercial losses in cut rose flowers, and the severity of gray mold disease partly depends on the presence of ethylene during the storage and transport. The effectiveness of nano silver (NS) and salicylic acid (SA) was assessed as a novel control agent in protecting the cut rose flowers against B. cinerea infection and ethylene damages. The efficacy of NS and SA was compared with an inoculated control (CON). A non-treated control (NT) was also used to evaluate the natural infection process. The results indicated that pretreatment with 20 mg L-1 NS significantly reduced B. cinerea growth in rose petals during vase periods. NS effectively suppressed the mRNA levels of ethylene biosynthesis genes (RhACS2, RhACS4, and RhACO1) and the reduction in expression levels of ethylene receptor genes (RhETR1, RhETR2, and RhETR5) and the downstream regulator RhCTR2 in rose petals after B. cinerea inoculation. NS application also decreased the expression of the B. cinerea snod-prot-like 1 (Bcspl1) gene which acts as the virulence factor in cut roses. In NS flowers, the maximum quantum yield of PSII (Fv/Fm) value was higher and the leaf temperature was lower on day 1, suggesting that these factors can be used for detecting B. cinerea infection and water stress in cut rose flowers. Furthermore, NS improved water relations and extended the vase life of cut rose flowers by 3.3 d, compared with that of NT flowers. In contrast, SA had no inhibitive effects on both B. cinerea growth and ethylene response in cut roses. The findings from the present study highlight NS as a promising new candidate for preventing B. cinerea infection and ethylene damages and for improving the postharvest quality of cut roses exported overseas.
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Affiliation(s)
- Suong Tuyet Thi Ha
- Division of Horticulture and Medicinal Plant, Andong National University, Andong 36729, Korea; (S.T.T.H.); (Y.-T.K.)
| | - Yong-Tae Kim
- Division of Horticulture and Medicinal Plant, Andong National University, Andong 36729, Korea; (S.T.T.H.); (Y.-T.K.)
| | - Yong Ho Jeon
- Department of Plant Medicine, Andong National University, Andong 36729, Korea; (Y.H.J.); (H.W.C.)
| | - Hyong Woo Choi
- Department of Plant Medicine, Andong National University, Andong 36729, Korea; (Y.H.J.); (H.W.C.)
| | - Byung-Chun In
- Division of Horticulture and Medicinal Plant, Andong National University, Andong 36729, Korea; (S.T.T.H.); (Y.-T.K.)
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236
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Son GH, Moon J, Shelake RM, Vuong UT, Ingle RA, Gassmann W, Kim JY, Kim SH. Conserved Opposite Functions in Plant Resistance to Biotrophic and Necrotrophic Pathogens of the Immune Regulator SRFR1. Int J Mol Sci 2021; 22:6427. [PMID: 34204013 PMCID: PMC8233967 DOI: 10.3390/ijms22126427] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2021] [Revised: 06/13/2021] [Accepted: 06/14/2021] [Indexed: 11/17/2022] Open
Abstract
Plant immunity is mediated in large part by specific interactions between a host resistance protein and a pathogen effector protein, named effector-triggered immunity (ETI). ETI needs to be tightly controlled both positively and negatively to enable normal plant growth because constitutively activated defense responses are detrimental to the host. In previous work, we reported that mutations in SUPPRESSOR OF rps4-RLD1 (SRFR1), identified in a suppressor screen, reactivated EDS1-dependent ETI to Pseudomonas syringae pv. tomato (Pto) DC3000. Besides, mutations in SRFR1 boosted defense responses to the generalist chewing insect Spodoptera exigua and the sugar beet cyst nematode Heterodera schachtii. Here, we show that mutations in SRFR1 enhance susceptibility to the fungal necrotrophs Fusarium oxysporum f. sp. lycopersici (FOL) and Botrytis cinerea in Arabidopsis. To translate knowledge obtained in AtSRFR1 research to crops, we generated SlSRFR1 alleles in tomato using a CRISPR/Cas9 system. Interestingly, slsrfr1 mutants increased expression of SA-pathway defense genes and enhanced resistance to Pto DC3000. In contrast, slsrfr1 mutants elevated susceptibility to FOL. Together, these data suggest that SRFR1 is functionally conserved in both Arabidopsis and tomato and functions antagonistically as a negative regulator to (hemi-) biotrophic pathogens and a positive regulator to necrotrophic pathogens.
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Affiliation(s)
- Geon Hui Son
- Division of Applied Life Science (BK21 Four Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 52828, Korea; (G.H.S.); (J.M.); (R.M.S.); (U.T.V.); (J.-Y.K.)
| | - Jiyun Moon
- Division of Applied Life Science (BK21 Four Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 52828, Korea; (G.H.S.); (J.M.); (R.M.S.); (U.T.V.); (J.-Y.K.)
| | - Rahul Mahadev Shelake
- Division of Applied Life Science (BK21 Four Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 52828, Korea; (G.H.S.); (J.M.); (R.M.S.); (U.T.V.); (J.-Y.K.)
| | - Uyen Thi Vuong
- Division of Applied Life Science (BK21 Four Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 52828, Korea; (G.H.S.); (J.M.); (R.M.S.); (U.T.V.); (J.-Y.K.)
| | - Robert A. Ingle
- Department of Molecular and Cell Biology, University of Cape Town, Cape Town 7700, South Africa;
| | - Walter Gassmann
- Division of Plant Sciences, Christopher S. Bond Life Sciences Center and Interdisciplinary Plant Group, University of Missouri, Columbia, MO 65211, USA;
| | - Jae-Yean Kim
- Division of Applied Life Science (BK21 Four Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 52828, Korea; (G.H.S.); (J.M.); (R.M.S.); (U.T.V.); (J.-Y.K.)
- Division of Life Science, Gyeongsang National University, Jinju 52828, Korea
| | - Sang Hee Kim
- Division of Applied Life Science (BK21 Four Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 52828, Korea; (G.H.S.); (J.M.); (R.M.S.); (U.T.V.); (J.-Y.K.)
- Division of Life Science, Gyeongsang National University, Jinju 52828, Korea
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237
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Kazerooni EA, Maharachchikumbura SSN, Al-Sadi AM, Kang SM, Yun BW, Lee IJ. Biocontrol Potential of Bacillus amyloliquefaciens against Botrytis pelargonii and Alternaria alternata on Capsicum annuum. J Fungi (Basel) 2021; 7:jof7060472. [PMID: 34200967 PMCID: PMC8230671 DOI: 10.3390/jof7060472] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Revised: 06/08/2021] [Accepted: 06/08/2021] [Indexed: 12/13/2022] Open
Abstract
The aim of this study was to assess the ability of Bacillus amyloliquefaciens, to augment plant growth and suppress gray mold and leaf spot in pepper plants. Morphological modifications in fungal pathogen hyphae that expanded toward the PGPR colonies were detected via scanning electron microscope. Furthermore, preliminary screening showed that PGPR could produce various hydrolytic enzymes in its media. Treatments with B. amyloliquefaciens suppressed Botrytis gray mold and Alternaria leaf spot diseases on pepper caused by Botrytis pelargonii and Alternaria alternata, respectively. The PGPR strain modulated plant physio-biochemical processes. The inoculation of pepper with PGPR decreased protein, amino acid, antioxidant, hydrogen peroxide, lipid peroxidation, and abscisic acid levels but increased salicylic acid and sugar levels compared to those of uninoculated plants, indicating a mitigation of the adverse effects of biotic stress. Moreover, gene expression studies confirmed physio-biochemical findings. PGPR inoculation led to increased expression of the CaXTH genes and decreased expression of CaAMP1, CaPR1, CaDEF1, CaWRKY2, CaBI-1, CaASRF1, CaSBP11, and CaBiP genes. Considering its beneficial effects, the inoculation of B. amyloliquefaciens can be proposed as an eco-friendly alternative to synthetic chemical fungicides.
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Affiliation(s)
- Elham Ahmed Kazerooni
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.-M.K.); (B.-W.Y.)
- Correspondence: (E.A.K.); (I.-J.L.)
| | | | - Abdullah Mohammed Al-Sadi
- Department of Plant Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, Al-Khod 123, Oman;
| | - Sang-Mo Kang
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.-M.K.); (B.-W.Y.)
| | - Byung-Wook Yun
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.-M.K.); (B.-W.Y.)
| | - In-Jung Lee
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.-M.K.); (B.-W.Y.)
- Correspondence: (E.A.K.); (I.-J.L.)
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Diffusible Compounds Produced by Hanseniaspora osmophila and Gluconobacter cerinus Help to Control the Causal Agents of Gray Rot and Summer Bunch Rot of Table Grapes. Antibiotics (Basel) 2021; 10:antibiotics10060664. [PMID: 34199335 PMCID: PMC8230015 DOI: 10.3390/antibiotics10060664] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Revised: 05/23/2021] [Accepted: 05/24/2021] [Indexed: 11/16/2022] Open
Abstract
Gray and summer bunch rot are important diseases of table grapes due to the high economic and environmental cost of their control with synthetic fungicides. The ability to produce antifungal compounds against the causal agents Botrytis, Aspergillus, Penicillium, and Rhizopus of two microorganisms isolated from table grapes and identified as Hanseniaspora osmophila and Gluconobacter cerinus was evaluated. In dual cultures, both biocontrol agents (together and separately) inhibited in vitro mycelial growth of these pathogens. To identify the compounds responsible for the inhibitory effect, extractions were carried out with organic solvents from biocontrol agents separately. Through dual cultures with pathogens and pure extracts, only the hexane extract from H. osmophila showed an inhibitory effect against Botrytis cinerea. To further identify these compounds, the direct bioautography technique was used. This technique made it possible to determine the band displaying antifungal activity at Rf = 0.05–0.2. The compounds present in this band were identified by GC-MS and compared to the NIST library. The most abundant compounds, not previously reported, corresponded to alkanes, ketones, alcohols, and terpenoids. H. osmophila and G. cerinus have the potential to control the causal agents of gray and summer bunch rot of table grapes.
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239
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Discovery of novel photosensitized nanoparticles as a preservative for the storage of strawberries and their activity against Botrytis cinerea. Lebensm Wiss Technol 2021. [DOI: 10.1016/j.lwt.2021.111359] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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240
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Liu Q, Liu P, Xu Y, Wang B, Liu P, Hao J, Liu X. Encapsulation of fluazinam to extend efficacy duration in controlling Botrytis cinerea on cucumber. PEST MANAGEMENT SCIENCE 2021; 77:2836-2842. [PMID: 33538400 DOI: 10.1002/ps.6318] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2020] [Revised: 02/01/2021] [Accepted: 02/04/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND Fluazinam is an effective fungicide in controlling gray mold, but has short duration of efficacy. Increasing application dosage may cause phytotoxicity. To overcome this shortage, a controlled-release technology was studied by encapsulating fluazinam. Ethyl cellulose polymer microcapsules were loaded with fluazinam to formulate a fluazinam capsule suspension (FCS). The efficacy for inhibition of B. cinerea and persistency of the FCS were examined by comparing with fluazinam technical concentrate (FTC) and aqueous fluazinam suspension concentrate (FSC) using microscopic observation and high-performance liquid chromatography analysis. RESULTS FCS formed capsules, with median size of 3.17 μm in diameter, had 82.3% encapsulation efficiency. It had a stronger inhibitory activity against B. cinerea than FTC and FSC measured 7 days after the treatments. The half-life of FCS on cucumber leaves was 3.4 days, longer than the 2.3 days of FSC. CONCLUSION FCS formulation significantly improved the inhibition of B. cinerea and resulted in prolonged and sustained release. Moreover, microencapsulation increased the duration of the efficacy of fluazinam on target crops. This formulation could help to sustain pesticides and protect the environment. © 2021 Society of Chemical Industry.
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Affiliation(s)
- Qizheng Liu
- College of Plant Protection, China Agricultural University, Beijing, China
| | - Panqing Liu
- College of Plant Protection, China Agricultural University, Beijing, China
| | - Yanjun Xu
- College of Science, China Agricultural University, Beijing, China
| | - Bin Wang
- State Key Laboratory of the Discovery and Development of Novel Pesticide, Shenyang Sinochem Agrochemicals R&D Co., Ltd, Shenyang, China
| | - Pengfei Liu
- College of Plant Protection, China Agricultural University, Beijing, China
| | - Jianjun Hao
- School of Food and Agriculture, University of Maine, Orono, ME, USA
| | - Xili Liu
- College of Plant Protection, China Agricultural University, Beijing, China
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241
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Dawadi S, Baysal-Gurel F, Addesso KM, Liyanapathiranage P, Simmons T. Fire Ant Venom Alkaloids: Possible Control Measure for Soilborne and Foliar Plant Pathogens. Pathogens 2021; 10:pathogens10060659. [PMID: 34071926 PMCID: PMC8229724 DOI: 10.3390/pathogens10060659] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2021] [Revised: 05/20/2021] [Accepted: 05/25/2021] [Indexed: 11/16/2022] Open
Abstract
The purpose of this study was to evaluate fire ant venom alkaloids and an alarm pheromone analog against several plant pathogens, including Botrytis cinerea, Fusarium oxysporum, Phytophthora nicotianae, P. cryptogea, Pseudomonas syringae, Phytopythium citrinum, Rhizoctonia solani, Sclerotonia rolfsii, Xanthomonas axonopodis, and X. campestris. All pathogens were tested against red imported fire ant venom alkaloid extract and alarm pheromone compound for growth inhibition in in vitro assay. The venom alkaloid extract inhibited fungal and oomycete pathogens. Neither of the treatments were effective against bacterial pathogens. Three soilborne pathogens, P. nicotianae, R. solani, F. oxysporum, and one foliar pathogen, B. cinerea were selected for further in-vivo assays on impatiens (Impatiens walleriana ‘Super Elfin XP violet’). Total plant and root weight were higher in venom alkaloid treated plants compared to an inoculated control. The venom alkaloid treatment reduced damping-off, root rot severity, and pathogen recovery in soilborne pathogen inoculated plants. Similarly, venom alkaloid reduced Botrytis blight. However, higher venom rates caused foliar phytotoxicity on plants. Therefore, additional work is needed to evaluate rates of venom alkaloids or formulations to eliminate negative impacts on plants. Overall, these results suggest that red imported fire ant venom alkaloids may provide a basis for new products to control soilborne and foliar plant pathogens.
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Affiliation(s)
- Sujan Dawadi
- Entomology Department, Purdue University, 901 W State Street, West Lafayette, IN 47907, USA;
| | - Fulya Baysal-Gurel
- Otis L. Floyd Nursery Research Center, Department of Agricultural and Environmental Sciences, Tennessee State University, McMinnville, TN 37110, USA; (K.M.A.); (T.S.)
- Correspondence: ; Tel.: +1-931-815-5143; Fax: +1-931-668-3134
| | - Karla M. Addesso
- Otis L. Floyd Nursery Research Center, Department of Agricultural and Environmental Sciences, Tennessee State University, McMinnville, TN 37110, USA; (K.M.A.); (T.S.)
| | - Prabha Liyanapathiranage
- Department of Entomology and Plant Pathology, Auburn University, 301 Funchess Hall, Auburn, AL 36849, USA;
| | - Terri Simmons
- Otis L. Floyd Nursery Research Center, Department of Agricultural and Environmental Sciences, Tennessee State University, McMinnville, TN 37110, USA; (K.M.A.); (T.S.)
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Hesami G, Darvishi S, Zarei M, Hadidi M. Fabrication of chitosan nanoparticles incorporated with
Pistacia
atlantica
subsp. kurdica hulls’ essential oil as a potential antifungal preservative against strawberry grey mould. Int J Food Sci Technol 2021. [DOI: 10.1111/ijfs.15110] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Golnaz Hesami
- Department of Food Science and Technology Sanandaj Branch, Islamic Azad University Pasdaran St, PO Box 618 Sanandaj Iran
| | - Sholeh Darvishi
- Department of Food Science and Technology Sanandaj Branch, Islamic Azad University Pasdaran St, PO Box 618 Sanandaj Iran
| | - Mohammad Zarei
- Department of Food Science and Technology Sanandaj Branch, Islamic Azad University Pasdaran St, PO Box 618 Sanandaj Iran
- Department of Food Science and Technology, School of industrial technology, Faculty of applied Sciences Universiti Teknologi MARA shah Alam Selangor 40450 Malaysia
| | - Milad Hadidi
- Department of Food Technology University of Lleida Av. Alcalde Rovira Roure, 191, 25198 Lleida Spain
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Spada M, Pugliesi C, Fambrini M, Pecchia S. Silencing of the Slt2-Type MAP Kinase Bmp3 in Botrytis cinerea by Application of Exogenous dsRNA Affects Fungal Growth and Virulence on Lactuca sativa. Int J Mol Sci 2021; 22:5362. [PMID: 34069750 PMCID: PMC8161090 DOI: 10.3390/ijms22105362] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Revised: 05/07/2021] [Accepted: 05/17/2021] [Indexed: 11/16/2022] Open
Abstract
Botrytis cinerea can attack over 500 genera of vascular plants and is considered the second phytopathogen in the 'top ten' for its economic importance. Traditional fungicides can be ineffective and with increasing fungicide resistance, new sustainable technologies are required. Lately, RNA interference-based fungicides are emerging for their potential uses in crop protection. Therefore, we assessed the potential of this innovative approach targeting the MAP kinase Bmp3 in B. cinerea, a gene involved in saprophytic growth, response to low osmolarity, conidiation, surface sensing, host penetration and lesion formation. After performing a prediction analysis of small interfering RNAs, a 427 nucleotides long dsRNA was selected as construct. We tested the effect of topical applications of dsRNA construct both in vitro by a fungal growth assay in microtiter plates and in vivo on detached lettuce leaves artificially inoculated. In both cases, topical applications of dsRNA led to gene knockdown with a delay in conidial germination, an evident growth retardation and a strong reduction of necrotic lesions on leaves. These results correlated with a strongly reduced expression of Bmp3 gene. In accordance to these findings, the Bmp3 gene could be a promising target for the development of an RNAi-based fungicide against B. cinerea.
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Affiliation(s)
- Maria Spada
- Department of Agriculture Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy; (C.P.); (M.F.)
| | - Claudio Pugliesi
- Department of Agriculture Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy; (C.P.); (M.F.)
| | - Marco Fambrini
- Department of Agriculture Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy; (C.P.); (M.F.)
| | - Susanna Pecchia
- Department of Agriculture Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy; (C.P.); (M.F.)
- Interdepartmental Research Center Nutrafood “Nutraceuticals and Food for Health”, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
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Gao P, Zhang H, Yan H, Wang Q, Yan B, Jian H, Tang K, Qiu X. RcTGA1 and glucosinolate biosynthesis pathway involvement in the defence of rose against the necrotrophic fungus Botrytis cinerea. BMC PLANT BIOLOGY 2021; 21:223. [PMID: 34001006 PMCID: PMC8130329 DOI: 10.1186/s12870-021-02973-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Accepted: 04/03/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND Rose is an important economic crop in horticulture. However, its field growth and postharvest quality are negatively affected by grey mould disease caused by Botrytis c. However, it is unclear how rose plants defend themselves against this fungal pathogen. Here, we used transcriptomic, metabolomic and VIGS analyses to explore the mechanism of resistance to Botrytis c. RESULT In this study, a protein activity analysis revealed a significant increase in defence enzyme activities in infected plants. RNA-Seq of plants infected for 0 h, 36 h, 60 h and 72 h produced a total of 54 GB of clean reads. Among these reads, 3990, 5995 and 8683 differentially expressed genes (DEGs) were found in CK vs. T36, CK vs. T60 and CK vs. T72, respectively. Gene annotation and cluster analysis of the DEGs revealed a variety of defence responses to Botrytis c. infection, including resistance (R) proteins, MAPK cascade reactions, plant hormone signal transduction pathways, plant-pathogen interaction pathways, Ca2+ and disease resistance-related genes. qPCR verification showed the reliability of the transcriptome data. The PTRV2-RcTGA1-infected plant material showed improved susceptibility of rose to Botrytis c. A total of 635 metabolites were detected in all samples, which could be divided into 29 groups. Metabonomic data showed that a total of 59, 78 and 74 DEMs were obtained for T36, T60 and T72 (T36: Botrytis c. inoculated rose flowers at 36 h; T60: Botrytis c. inoculated rose flowers at 60 h; T72: Botrytis c. inoculated rose flowers at 72 h) compared to CK, respectively. A variety of secondary metabolites are related to biological disease resistance, including tannins, amino acids and derivatives, and alkaloids, among others; they were significantly increased and enriched in phenylpropanoid biosynthesis, glucosinolates and other disease resistance pathways. This study provides a theoretical basis for breeding new cultivars that are resistant to Botrytis c. CONCLUSION Fifty-four GB of clean reads were generated through RNA-Seq. R proteins, ROS signalling, Ca2+ signalling, MAPK signalling, and SA signalling were activated in the Old Blush response to Botrytis c. RcTGA1 positively regulates rose resistance to Botrytis c. A total of 635 metabolites were detected in all samples. DEMs were enriched in phenylpropanoid biosynthesis, glucosinolates and other disease resistance pathways.
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Affiliation(s)
- Penghua Gao
- Flower Research Institute, Yunnan Academy of Agricultural Sciences/National Engineering Research Center for Ornamental Horticulture, Kunming, 650205, China
- Southwest Forestry University, Kunming, 650024, China
| | - Hao Zhang
- Flower Research Institute, Yunnan Academy of Agricultural Sciences/National Engineering Research Center for Ornamental Horticulture, Kunming, 650205, China
| | - Huijun Yan
- Flower Research Institute, Yunnan Academy of Agricultural Sciences/National Engineering Research Center for Ornamental Horticulture, Kunming, 650205, China
| | - Qigang Wang
- Flower Research Institute, Yunnan Academy of Agricultural Sciences/National Engineering Research Center for Ornamental Horticulture, Kunming, 650205, China
| | - Bo Yan
- Southwest Forestry University, Kunming, 650024, China
| | - Hongying Jian
- Flower Research Institute, Yunnan Academy of Agricultural Sciences/National Engineering Research Center for Ornamental Horticulture, Kunming, 650205, China
| | - Kaixue Tang
- Flower Research Institute, Yunnan Academy of Agricultural Sciences/National Engineering Research Center for Ornamental Horticulture, Kunming, 650205, China.
| | - Xianqin Qiu
- Flower Research Institute, Yunnan Academy of Agricultural Sciences/National Engineering Research Center for Ornamental Horticulture, Kunming, 650205, China.
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Machado TO, Beckers SJ, Fischer J, Sayer C, de Araújo PHH, Landfester K, Wurm FR. Cellulose nanocarriers via miniemulsion allow Pathogen-Specific agrochemical delivery. J Colloid Interface Sci 2021; 601:678-688. [PMID: 34091315 DOI: 10.1016/j.jcis.2021.05.030] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 04/20/2021] [Accepted: 05/06/2021] [Indexed: 11/16/2022]
Abstract
The current spraying of agrochemicals is unselective and ineffective, consuming a high amount of fungicides, which endangers the environment and human health. Cellulose-based nanocarriers (NCs) are a promising tool in sustainable agriculture and suitable vehicles for stimuli-responsive release of agrochemicals to target cellulase-segregating fungi, which cause severe plant diseases such as Apple Canker. Herein, cellulose was modified with undec-10-enoic acid to a hydrophobic and cross-linkable derivative, from which NCs were prepared via thiol-ene addition in miniemulsion. During the crosslinking reaction, the NCs were loaded in situ with hydrophobic fungicides, Captan and Pyraclostrobin. NCs with average sizes ranging from 200 to 300 nm and an agrochemical-load of 20 wt% were obtained. Cellulose-degrading fungi, e.g. Neonectria. ditissima which is responsible for Apple Canker, lead to the release of fungicides from the aqueous NC dispersions suppressing fungal growth. In contrast, the non-cellulase segregating fungi, e.g. Cylindrocladium buxicola, do not degrade the agrochemical-loaded NCs. This selective action against Apple Canker fungi, N. ditissima, proves the efficacy of NC-mediated drug delivery triggered by degradation in the exclusive presence of cellulolytic fungi. Cellulose NCs represent a sustainable alternative to the current unselective spraying of agrochemicals that treats many crop diseases ineffectively.
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Affiliation(s)
- Thiago O Machado
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany; Department of Chemical Engineering and Food Engineering, Federal University of Santa Catarina, PO Box 476, Florianópolis, SC 88040 900, Brazil
| | - Sebastian J Beckers
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany
| | - Jochen Fischer
- Institute for Biotechnology and Drug Research, Erwin-Schrödinger-Str. 56, 67663 Kaiserslautern, Germany
| | - Claudia Sayer
- Department of Chemical Engineering and Food Engineering, Federal University of Santa Catarina, PO Box 476, Florianópolis, SC 88040 900, Brazil
| | - Pedro H H de Araújo
- Department of Chemical Engineering and Food Engineering, Federal University of Santa Catarina, PO Box 476, Florianópolis, SC 88040 900, Brazil
| | - Katharina Landfester
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany
| | - Frederik R Wurm
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany; Sustainable Polymer Chemistry Group, Department of Molecules and Materials, MESA+ Institute for Nanotechnology, Faculty of Science and Technology, Universiteit Twente, PO Box 217, 7500 AE Enschede, the Netherlands.
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Abstract
Botrytis cinerea is one of the most important plant-pathogenic fungus. Products based on microorganisms can be used in biocontrol strategies alternative to chemical control, and mycoviruses have been explored as putative biological agents in such approaches. Here, we have explored the mycovirome of B. cinerea isolates from grapevine of Italy and Spain to increase the knowledge about mycoviral diversity and evolution, and to search for new widely distributed mycoviruses that could be active ingredients in biological products to control this hazardous fungus. A total of 248 B. cinerea field isolates were used for our metatranscriptomic study. Ninety-two mycoviruses were identified: 62 new mycoviral species constituting putative novel viral genera and families. Of these mycoviruses, 57 had a positive-sense single-stranded RNA (ssRNA) genome, 19 contained a double-stranded RNA (dsRNA) genome, 15 had a negative-sense ssRNA genome, and 1 contained a single-stranded DNA (ssDNA) genome. In general, ssRNA mycoviruses were widely distributed in all sampled regions, the ssDNA mycovirus was more frequently found in Spain, and dsRNA mycoviruses were scattered in some pools of both countries. Some of the identified mycoviruses belong to clades that have never been found associated with Botrytis species: Botrytis-infecting narnaviruses; alpha-like, umbra-like, and tymo-like ssRNA+ mycoviruses; trisegmented ssRNA- mycovirus; bisegmented and tetrasegmented dsRNA mycoviruses; and finally, an ssDNA mycovirus. Among the results obtained in this massive mycovirus screening, the discovery of novel bisegmented viruses, phylogenetically related to narnaviruses, is remarkable.IMPORTANCE The results obtained here have expanded our knowledge of mycoviral diversity, horizontal transfers, and putative cross-kingdom events. To date, this study presents the most extensive and wide diversity collection of mycoviruses infecting the necrotrophic fungus B. cinerea The collection included all types of mycoviruses, with dsRNA, ssRNA+, ssRNA-, and ssDNA genomes, most of which were discovered here, and some of which were previously reported as infecting B. cinerea or other plant-pathogenic fungi. Some of these mycoviruses are reported for the first time here associated with B. cinerea, as a trisegmented ssRNA- mycovirus and as an ssDNA mycovirus, but even more remarkablly, we also describe here four novel bisegmented viruses (binarnaviruses) not previously described in nature. The present findings significantly contribute to general knowledge in virology and more particularly in the field of mycovirology.
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247
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Bika R, Baysal-Gurel F, Jennings C. Botrytis cinereamanagement in ornamental production: a continuous battle. CANADIAN JOURNAL OF PLANT PATHOLOGY 2021; 43:345-365. [PMID: 0 DOI: 10.1080/07060661.2020.1807409] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 08/04/2020] [Indexed: 05/26/2023]
Affiliation(s)
- Ravi Bika
- Department of Agricultural and Environmental Sciences, College of Agriculture, Tennessee State University, Otis L. Floyd Nursery Research Center, 472 Cadillac Lane, McMinnville, TN 37110, USA
| | - Fulya Baysal-Gurel
- Department of Agricultural and Environmental Sciences, College of Agriculture, Tennessee State University, Otis L. Floyd Nursery Research Center, 472 Cadillac Lane, McMinnville, TN 37110, USA
| | - Christina Jennings
- Department of Agricultural and Environmental Sciences, College of Agriculture, Tennessee State University, Otis L. Floyd Nursery Research Center, 472 Cadillac Lane, McMinnville, TN 37110, USA
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248
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Wang C, Yang J, Qin J, Yang Y. Eco-Friendly Nanoplatforms for Crop Quality Control, Protection, and Nutrition. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2021; 8:2004525. [PMID: 33977068 PMCID: PMC8097385 DOI: 10.1002/advs.202004525] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 12/31/2020] [Indexed: 05/27/2023]
Abstract
Agricultural chemicals have been widely utilized to manage pests, weeds, and plant pathogens for maximizing crop yields. However, the excessive use of these organic substances to compensate their instability in the environment has caused severe environmental consequences, threatened human health, and consumed enormous economic costs. In order to improve the utilization efficiency of these agricultural chemicals, one strategy that attracted researchers is to design novel eco-friendly nanoplatforms. To date, numerous advanced nanoplatforms with functional components have been applied in the agricultural field, such as silica-based materials for pesticides delivery, metal/metal oxide nanoparticles for pesticides/mycotoxins detection, and carbon nanoparticles for fertilizers delivery. In this review, the synthesis, applications, and mechanisms of recent eco-friendly nanoplatforms in the agricultural field, including pesticides and mycotoxins on-site detection, phytopathogen inactivation, pest control, and crops growth regulation for guaranteeing food security, enhancing the utilization efficiency of agricultural chemicals and increasing crop yields are highlighted. The review also stimulates new thinking for improving the existing agricultural technologies, protecting crops from biotic and abiotic stress, alleviating the global food crisis, and ensuring food security. In addition, the challenges to overcome the constrained applications of functional nanoplatforms in the agricultural field are also discussed.
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Affiliation(s)
- Chao‐Yi Wang
- College of Chemistry and College of Plant ScienceJilin UniversityChangchun130012P. R. China
| | - Jie Yang
- College of Chemistry and College of Plant ScienceJilin UniversityChangchun130012P. R. China
| | - Jian‐Chun Qin
- College of Chemistry and College of Plant ScienceJilin UniversityChangchun130012P. R. China
| | - Ying‐Wei Yang
- College of Chemistry and College of Plant ScienceJilin UniversityChangchun130012P. R. China
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249
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Schwendel BH, Anekal PV, Zarate E, Bang KW, Guo G, Grey AC, Pinu FR. Mass Spectrometry-Based Metabolomics to Investigate the Effect of Mechanical Shaking on Sauvignon Blanc Berry Metabolism. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:4918-4933. [PMID: 33856217 DOI: 10.1021/acs.jafc.1c00413] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Previous commercial studies carried out in New Zealand showed that mechanical shaking significantly reduced the incidence of Botrytis cinerea infection in wine grapes. However, the reasons behind this reduction are not well understood. Here, we employed a metabolomics approach to gain insights into the biochemical changes that occur in grape berries due to mechanical shaking. Berry samples were analyzed using three different analytical approaches including gas chromatography and mass spectrometry (MS), liquid chromatography and MS, and imaging mass spectrometry (IMS). Combined data provided a comprehensive overview of metabolic changes in grape berry, indicating the initiation of different stress mitigation strategies to overcome the effect of mechanical shaking. Berry primary metabolism was distinctly altered in the green berries in response to mechanical shaking, while secondary metabolism significantly changed in berries collected after veraison. Pathway analysis showed upregulation of metabolites related to nitrogen and lipid metabolism in the berries from shaken vines when compared with controls. From IMS data, we observed an accumulation of different groups of metabolites including phenolic compounds and amino and fatty acids in the areas near to the skin of berries from shaken vines. This observation suggests that mechanical shaking caused an accumulation of these metabolites, which may be associated with the formation of a protective barrier, leading to the reduction in B. cinerea infection in berries from mechanically shaken vines.
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Affiliation(s)
- Brigitte Heike Schwendel
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North 4474, New Zealand
| | - Praju Vikas Anekal
- School of Medical Sciences, Faculty of Medical and Health Sciences, University of Auckland, Auckland 1023, New Zealand
- Biomedical Imaging Research Unit, Faculty of Medical and Health Sciences, University of Auckland, Auckland 1023, New Zealand
| | - Erica Zarate
- School of Biological Sciences, University of Auckland, Auckland 1010, New Zealand
| | - Kyung Whan Bang
- School of Biological Sciences, University of Auckland, Auckland 1010, New Zealand
| | - George Guo
- School of Medical Sciences, Faculty of Medical and Health Sciences, University of Auckland, Auckland 1023, New Zealand
| | - Angus C Grey
- School of Medical Sciences, Faculty of Medical and Health Sciences, University of Auckland, Auckland 1023, New Zealand
- Biomedical Imaging Research Unit, Faculty of Medical and Health Sciences, University of Auckland, Auckland 1023, New Zealand
| | - Farhana R Pinu
- The New Zealand Institute for Plant and Food Research Limited, Auckland 1025, New Zealand
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250
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Naegele RP, DeLong J, Alzohairy SA, Saito S, Abdelsamad N, Miles TD. Population Genetic Analyses of Botrytis cinerea Isolates From Michigan Vineyards Using a High-Throughput Marker System Approach. Front Microbiol 2021; 12:660874. [PMID: 33959117 PMCID: PMC8093758 DOI: 10.3389/fmicb.2021.660874] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 03/09/2021] [Indexed: 11/29/2022] Open
Abstract
As sequencing costs continue to decrease, new tools are being developed for assessing pathogen diversity and population structure. Traditional marker types, such as microsatellites, are often more cost effective than single-nucleotide polymorphism (SNP) panels when working with small numbers of individuals, but may not allow for fine scale evaluation of low or moderate structure in populations. Botrytis cinerea is a necrotrophic plant pathogen with high genetic variability that can infect more than 200 plant species worldwide. A panel of 52 amplicons were sequenced for 82 isolates collected from four Michigan vineyards representing 2 years of collection and varying fungicide resistance. A panel of nine microsatellite markers previously described was also tested across 74 isolates from the same population. A microsatellite and SNP marker analysis of B. cinerea populations was performed to assess the genetic diversity and population structure of Michigan vineyards, and the results from both marker types were compared. Both methods were able to detect population structure associated with resistance to the individual fungicides thiabendazole and boscalid, and multiple fungicide resistance (MFR). Microsatellites were also able to differentiate population structure associated with another fungicide, fluopyram, while SNPs were able to additionally differentiate structure based on year. For both methods, AMOVA results were similar, with microsatellite results explaining a smaller portion of the variation compared with the SNP results. The SNP-based markers presented here were able to successfully differentiate population structure similar to microsatellite results. These SNP markers represent new tools to discriminate B. cinerea isolates within closely related populations using multiple targeted sequences.
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Affiliation(s)
- Rachel P Naegele
- Crop Diseases, Pests and Genetics Unit, United States Department of Agriculture, Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, CA, United States
| | - Jeff DeLong
- Crop Diseases, Pests and Genetics Unit, United States Department of Agriculture, Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, CA, United States
| | - Safa A Alzohairy
- Small Fruit and Hop Pathology Laboratory, Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, United States
| | - Seiya Saito
- Commodity Protection and Quality Unit, United States Department of Agriculture, Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, CA, United States
| | - Noor Abdelsamad
- Crop Diseases, Pests and Genetics Unit, United States Department of Agriculture, Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, CA, United States
| | - Timothy D Miles
- Small Fruit and Hop Pathology Laboratory, Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, United States
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