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For: Du J, Zhong X, Bernatavichute YV, Stroud H, Feng S, Caro E, Vashisht AA, Terragni J, Chin HG, Tu A, Hetzel J, Wohlschlegel JA, Pradhan S, Patel DJ, Jacobsen SE. Dual binding of chromomethylase domains to H3K9me2-containing nucleosomes directs DNA methylation in plants. Cell 2012;151:167-80. [PMID: 23021223 DOI: 10.1016/j.cell.2012.07.034] [Citation(s) in RCA: 334] [Impact Index Per Article: 27.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2012] [Revised: 07/06/2012] [Accepted: 07/31/2012] [Indexed: 11/21/2022]
Number Cited by Other Article(s)
301
Kuhlmann M, Finke A, Mascher M, Mette MF. DNA methylation maintenance consolidates RNA-directed DNA methylation and transcriptional gene silencing over generations in Arabidopsis thaliana. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2014;80:269-81. [PMID: 25070184 DOI: 10.1111/tpj.12630] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2014] [Revised: 07/21/2014] [Accepted: 07/24/2014] [Indexed: 05/22/2023]
302
Cui X, Cao X. Epigenetic regulation and functional exaptation of transposable elements in higher plants. CURRENT OPINION IN PLANT BIOLOGY 2014;21:83-88. [PMID: 25061895 DOI: 10.1016/j.pbi.2014.07.001] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2014] [Revised: 06/23/2014] [Accepted: 07/02/2014] [Indexed: 05/06/2023]
303
Epigenetic dysregulation by nickel through repressive chromatin domain disruption. Proc Natl Acad Sci U S A 2014;111:14631-6. [PMID: 25246589 DOI: 10.1073/pnas.1406923111] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
304
Yelagandula R, Stroud H, Holec S, Zhou K, Feng S, Zhong X, Muthurajan UM, Nie X, Kawashima T, Groth M, Luger K, Jacobsen SE, Berger F. The histone variant H2A.W defines heterochromatin and promotes chromatin condensation in Arabidopsis. Cell 2014;158:98-109. [PMID: 24995981 DOI: 10.1016/j.cell.2014.06.006] [Citation(s) in RCA: 197] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2013] [Revised: 03/14/2014] [Accepted: 05/14/2014] [Indexed: 11/18/2022]
305
West PT, Li Q, Ji L, Eichten SR, Song J, Vaughn MW, Schmitz RJ, Springer NM. Genomic distribution of H3K9me2 and DNA methylation in a maize genome. PLoS One 2014;9:e105267. [PMID: 25122127 PMCID: PMC4133378 DOI: 10.1371/journal.pone.0105267] [Citation(s) in RCA: 116] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2014] [Accepted: 07/18/2014] [Indexed: 11/24/2022]  Open
306
Alqarni SSM, Murthy A, Zhang W, Przewloka MR, Silva APG, Watson AA, Lejon S, Pei XY, Smits AH, Kloet SL, Wang H, Shepherd NE, Stokes PH, Blobel GA, Vermeulen M, Glover DM, Mackay JP, Laue ED. Insight into the architecture of the NuRD complex: structure of the RbAp48-MTA1 subcomplex. J Biol Chem 2014;289:21844-55. [PMID: 24920672 PMCID: PMC4139204 DOI: 10.1074/jbc.m114.558940] [Citation(s) in RCA: 68] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2014] [Revised: 05/30/2014] [Indexed: 12/22/2022]  Open
307
Cheng X. Structural and functional coordination of DNA and histone methylation. Cold Spring Harb Perspect Biol 2014;6:6/8/a018747. [PMID: 25085914 DOI: 10.1101/cshperspect.a018747] [Citation(s) in RCA: 73] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
308
Kawashima T, Berger F. Epigenetic reprogramming in plant sexual reproduction. Nat Rev Genet 2014;15:613-24. [DOI: 10.1038/nrg3685] [Citation(s) in RCA: 193] [Impact Index Per Article: 19.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
309
Du J, Johnson LM, Groth M, Feng S, Hale CJ, Li S, Vashisht AA, Wohlschlegel JA, Patel DJ, Jacobsen SE. Mechanism of DNA methylation-directed histone methylation by KRYPTONITE. Mol Cell 2014;55:495-504. [PMID: 25018018 DOI: 10.1016/j.molcel.2014.06.009] [Citation(s) in RCA: 134] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2014] [Revised: 05/12/2014] [Accepted: 06/02/2014] [Indexed: 01/08/2023]
310
Dinh TT, Gao L, Liu X, Li D, Li S, Zhao Y, O'Leary M, Le B, Schmitz RJ, Manavella P, Li S, Weigel D, Pontes O, Ecker JR, Chen X. DNA topoisomerase 1α promotes transcriptional silencing of transposable elements through DNA methylation and histone lysine 9 dimethylation in Arabidopsis. PLoS Genet 2014;10:e1004446. [PMID: 24992598 PMCID: PMC4080997 DOI: 10.1371/journal.pgen.1004446] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2013] [Accepted: 05/05/2014] [Indexed: 11/18/2022]  Open
311
Eichten SR, Schmitz RJ, Springer NM. Epigenetics: Beyond Chromatin Modifications and Complex Genetic Regulation. PLANT PHYSIOLOGY 2014;165:933-947. [PMID: 24872382 PMCID: PMC4081347 DOI: 10.1104/pp.113.234211] [Citation(s) in RCA: 89] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
312
Dnmt1-independent CG methylation contributes to nucleosome positioning in diverse eukaryotes. Cell 2014;156:1286-1297. [PMID: 24630728 DOI: 10.1016/j.cell.2014.01.029] [Citation(s) in RCA: 136] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2013] [Revised: 10/25/2013] [Accepted: 01/10/2014] [Indexed: 11/24/2022]
313
Zhao Y, Chen X. Noncoding RNAs and DNA Methylation in Plants. Natl Sci Rev 2014;1:219-229. [PMID: 25635229 DOI: 10.1093/nsr/nwu003] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
314
Zhong X, Du J, Hale CJ, Gallego-Bartolome J, Feng S, Vashisht AA, Chory J, Wohlschlegel JA, Patel DJ, Jacobsen SE. Molecular mechanism of action of plant DRM de novo DNA methyltransferases. Cell 2014;157:1050-60. [PMID: 24855943 PMCID: PMC4123750 DOI: 10.1016/j.cell.2014.03.056] [Citation(s) in RCA: 197] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2013] [Revised: 02/20/2014] [Accepted: 03/17/2014] [Indexed: 01/01/2023]
315
Transcriptional gene silencing by Arabidopsis microrchidia homologues involves the formation of heteromers. Proc Natl Acad Sci U S A 2014;111:7474-9. [PMID: 24799676 DOI: 10.1073/pnas.1406611111] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
316
Kim MY, Zilberman D. DNA methylation as a system of plant genomic immunity. TRENDS IN PLANT SCIENCE 2014;19:320-6. [PMID: 24618094 DOI: 10.1016/j.tplants.2014.01.014] [Citation(s) in RCA: 73] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2013] [Revised: 01/28/2014] [Accepted: 01/31/2014] [Indexed: 05/06/2023]
317
Du J, Patel DJ. Structural biology-based insights into combinatorial readout and crosstalk among epigenetic marks. BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 2014;1839:719-27. [PMID: 24747177 DOI: 10.1016/j.bbagrm.2014.04.011] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2014] [Revised: 03/20/2014] [Accepted: 04/11/2014] [Indexed: 12/11/2022]
318
Blevins T, Pontvianne F, Cocklin R, Podicheti R, Chandrasekhara C, Yerneni S, Braun C, Lee B, Rusch D, Mockaitis K, Tang H, Pikaard CS. A two-step process for epigenetic inheritance in Arabidopsis. Mol Cell 2014;54:30-42. [PMID: 24657166 DOI: 10.1016/j.molcel.2014.02.019] [Citation(s) in RCA: 64] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2013] [Revised: 12/08/2013] [Accepted: 02/13/2014] [Indexed: 10/25/2022]
319
Guerrero-Bosagna C, Skinner MK. Environmental epigenetics and effects on male fertility. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2014;791:67-81. [PMID: 23955673 DOI: 10.1007/978-1-4614-7783-9_5] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
320
Niederhuth CE, Schmitz RJ. Covering your bases: inheritance of DNA methylation in plant genomes. MOLECULAR PLANT 2014;7:472-80. [PMID: 24270503 PMCID: PMC3941479 DOI: 10.1093/mp/sst165] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2013] [Accepted: 11/11/2013] [Indexed: 05/24/2023]
321
Garg R, Kumari R, Tiwari S, Goyal S. Genomic survey, gene expression analysis and structural modeling suggest diverse roles of DNA methyltransferases in legumes. PLoS One 2014;9:e88947. [PMID: 24586452 PMCID: PMC3934875 DOI: 10.1371/journal.pone.0088947] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2013] [Accepted: 01/15/2014] [Indexed: 11/18/2022]  Open
322
Dangwal M, Kapoor S, Kapoor M. The PpCMT chromomethylase affects cell growth and interacts with the homolog of LIKE HETEROCHROMATIN PROTEIN 1 in the moss Physcomitrella patens. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2014;77:589-603. [PMID: 24329971 DOI: 10.1111/tpj.12406] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2013] [Revised: 11/30/2013] [Accepted: 12/03/2013] [Indexed: 05/06/2023]
323
Liu ZW, Shao CR, Zhang CJ, Zhou JX, Zhang SW, Li L, Chen S, Huang HW, Cai T, He XJ. The SET domain proteins SUVH2 and SUVH9 are required for Pol V occupancy at RNA-directed DNA methylation loci. PLoS Genet 2014;10:e1003948. [PMID: 24465213 PMCID: PMC3898904 DOI: 10.1371/journal.pgen.1003948] [Citation(s) in RCA: 132] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2013] [Accepted: 09/25/2013] [Indexed: 12/05/2022]  Open
324
Borges F, Martienssen RA. Establishing epigenetic variation during genome reprogramming. RNA Biol 2014;10:490-4. [PMID: 23774895 DOI: 10.4161/rna.24085] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]  Open
325
Coustham V, Vlad D, Deremetz A, Gy I, Cubillos FA, Kerdaffrec E, Loudet O, Bouché N. SHOOT GROWTH1 maintains Arabidopsis epigenomes by regulating IBM1. PLoS One 2014;9:e84687. [PMID: 24404182 PMCID: PMC3880313 DOI: 10.1371/journal.pone.0084687] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2013] [Accepted: 11/26/2013] [Indexed: 11/17/2022]  Open
326
Hou PQ, Lee YI, Hsu KT, Lin YT, Wu WZ, Lin JY, Nam TN, Fu SF. Functional characterization of Nicotiana benthamiana chromomethylase 3 in developmental programs by virus-induced gene silencing. PHYSIOLOGIA PLANTARUM 2014;150:119-32. [PMID: 23683172 DOI: 10.1111/ppl.12071] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2013] [Revised: 05/02/2013] [Accepted: 05/03/2013] [Indexed: 05/11/2023]
327
Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis. Nat Struct Mol Biol 2013;21:64-72. [PMID: 24336224 PMCID: PMC4103798 DOI: 10.1038/nsmb.2735] [Citation(s) in RCA: 559] [Impact Index Per Article: 50.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2013] [Accepted: 11/14/2013] [Indexed: 11/09/2022]
328
Identification of Arabidopsis SUMO-interacting proteins that regulate chromatin activity and developmental transitions. Proc Natl Acad Sci U S A 2013;110:19956-61. [PMID: 24255109 DOI: 10.1073/pnas.1319985110] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]  Open
329
Patel DJ, Wang Z. Readout of epigenetic modifications. Annu Rev Biochem 2013;82:81-118. [PMID: 23642229 DOI: 10.1146/annurev-biochem-072711-165700] [Citation(s) in RCA: 251] [Impact Index Per Article: 22.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
330
Pecinka A, Abdelsamad A, Vu GTH. Hidden genetic nature of epigenetic natural variation in plants. TRENDS IN PLANT SCIENCE 2013;18:625-32. [PMID: 23953885 DOI: 10.1016/j.tplants.2013.07.005] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Revised: 07/08/2013] [Accepted: 07/11/2013] [Indexed: 05/22/2023]
331
Turck F, Coupland G. Natural variation in epigenetic gene regulation and its effects on plant developmental traits. Evolution 2013;68:620-31. [PMID: 24117443 DOI: 10.1111/evo.12286] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2013] [Accepted: 09/30/2013] [Indexed: 01/02/2023]
332
Schmitz RJ, He Y, Valdés-López O, Khan SM, Joshi T, Urich MA, Nery JR, Diers B, Xu D, Stacey G, Ecker JR. Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population. Genome Res 2013;23:1663-74. [PMID: 23739894 PMCID: PMC3787263 DOI: 10.1101/gr.152538.112] [Citation(s) in RCA: 169] [Impact Index Per Article: 15.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2012] [Accepted: 06/05/2013] [Indexed: 01/22/2023]
333
RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1. Proc Natl Acad Sci U S A 2013;110:15467-72. [PMID: 24003136 DOI: 10.1073/pnas.1315399110] [Citation(s) in RCA: 74] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]  Open
334
Zhang H, Wang B, Duan CG, Zhu JK. Chemical probes in plant epigenetics studies. PLANT SIGNALING & BEHAVIOR 2013;8:25364. [PMID: 23838953 PMCID: PMC4002629 DOI: 10.4161/psb.25364] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2013] [Accepted: 06/11/2013] [Indexed: 06/01/2023]
335
Gehring M. Genomic imprinting: insights from plants. Annu Rev Genet 2013;47:187-208. [PMID: 24016190 DOI: 10.1146/annurev-genet-110711-155527] [Citation(s) in RCA: 135] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
336
Xu C, Tian J, Mo B. siRNA-mediated DNA methylation and H3K9 dimethylation in plants. Protein Cell 2013;4:656-63. [PMID: 23943321 DOI: 10.1007/s13238-013-3052-7] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2013] [Accepted: 07/04/2013] [Indexed: 12/25/2022]  Open
337
Saze H, Kitayama J, Takashima K, Miura S, Harukawa Y, Ito T, Kakutani T. Mechanism for full-length RNA processing of Arabidopsis genes containing intragenic heterochromatin. Nat Commun 2013;4:2301. [DOI: 10.1038/ncomms3301] [Citation(s) in RCA: 68] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2013] [Accepted: 07/12/2013] [Indexed: 01/20/2023]  Open
338
Zhou HR, Zhang FF, Ma ZY, Huang HW, Jiang L, Cai T, Zhu JK, Zhang C, He XJ. Folate polyglutamylation is involved in chromatin silencing by maintaining global DNA methylation and histone H3K9 dimethylation in Arabidopsis. THE PLANT CELL 2013;25:2545-59. [PMID: 23881414 PMCID: PMC3753382 DOI: 10.1105/tpc.113.114678] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2013] [Revised: 06/09/2013] [Accepted: 07/10/2013] [Indexed: 05/17/2023]
339
González RM, Ricardi MM, Iusem ND. Epigenetic marks in an adaptive water stress-responsive gene in tomato roots under normal and drought conditions. Epigenetics 2013;8:864-72. [PMID: 23807313 PMCID: PMC3883789 DOI: 10.4161/epi.25524] [Citation(s) in RCA: 60] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
340
The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin. Cell 2013;153:193-205. [PMID: 23540698 DOI: 10.1016/j.cell.2013.02.033] [Citation(s) in RCA: 728] [Impact Index Per Article: 66.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2012] [Revised: 12/01/2012] [Accepted: 02/11/2013] [Indexed: 11/20/2022]
341
Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature 2013;498:385-9. [PMID: 23636332 DOI: 10.1038/nature12178] [Citation(s) in RCA: 250] [Impact Index Per Article: 22.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2012] [Accepted: 04/12/2013] [Indexed: 12/31/2022]
342
DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV. Proc Natl Acad Sci U S A 2013;110:8290-5. [PMID: 23637343 DOI: 10.1073/pnas.1300585110] [Citation(s) in RCA: 128] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
343
Borges F, Calarco JP, Martienssen RA. Reprogramming the epigenome in Arabidopsis pollen. COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 2013;77:1-5. [PMID: 23619015 DOI: 10.1101/sqb.2013.77.014969] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
344
Li P, Demirci F, Mahalingam G, Demirci C, Nakano M, Meyers BC. An integrated workflow for DNA methylation analysis. J Genet Genomics 2013;40:249-60. [PMID: 23706300 DOI: 10.1016/j.jgg.2013.03.010] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2013] [Revised: 03/25/2013] [Accepted: 03/25/2013] [Indexed: 10/27/2022]
345
Nikolov M, Fischle W. Systematic analysis of histone modification readout. ACTA ACUST UNITED AC 2013;9:182-94. [DOI: 10.1039/c2mb25328c] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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