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Nakatsu K, Okamoto A, Hayashi G, Murakami H. Repetitive Thiazolidine Deprotection Using a Thioester‐Compatible Aldehyde Scavenger for One‐Pot Multiple Peptide Ligation**. Angew Chem Int Ed Engl 2022; 61:e202206240. [DOI: 10.1002/anie.202206240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Indexed: 11/10/2022]
Affiliation(s)
- Koki Nakatsu
- Department of Biomolecular Engineering Graduate School of Engineering Nagoya University Furo-cho Chikusa-ku Nagoya 464-8603 Japan
| | - Akimitsu Okamoto
- Department of Chemistry and Biotechnology Graduate School of Engineering The University of Tokyo 7-3-1 Hongo Bunkyo-ku Tokyo 113-8656 Japan
- Research Center for Advanced Science and Technology The University of Tokyo 4-6-1 Komaba Meguro-ku Tokyo 153-8904 Japan
| | - Gosuke Hayashi
- Department of Biomolecular Engineering Graduate School of Engineering Nagoya University Furo-cho Chikusa-ku Nagoya 464-8603 Japan
| | - Hiroshi Murakami
- Department of Biomolecular Engineering Graduate School of Engineering Nagoya University Furo-cho Chikusa-ku Nagoya 464-8603 Japan
- Institute of Nano-Life-Systems Institutes of Innovation for Future Society Nagoya University Furo-cho Chikusa-ku Nagoya 464-8603 Japan
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2
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Hayashi G, Nakatsu K, Okamoto A, Murakami H. Repetitive Thiazolidine Deprotection Using a Thioester‐Compatible Aldehyde Scavenger for One‐Pot Multiple Peptide Ligation. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202206240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Gosuke Hayashi
- Nagoya University Graduate School of Engineering School of Engineering: Nagoya Daigaku Kogakubu Daigakuin Kogaku Kenkyuka Biomolecular Engineering Furo-choChikusa-ku 464-8603 Nagoya JAPAN
| | - Koki Nakatsu
- Nagoya University Graduate School of Engineering School of Engineering: Nagoya Daigaku Kogakubu Daigakuin Kogaku Kenkyuka Biomolecular Engineering JAPAN
| | - Akimitsu Okamoto
- The University of Tokyo Graduate School of Engineering Faculty of Engineering: Tokyo Daigaku Daigakuin Kogakukei Kenkyuka Kogakubu Chemistry and Biotechnology JAPAN
| | - Hiroshi Murakami
- Nagoya University Graduate School of Engineering School of Engineering: Nagoya Daigaku Kogakubu Daigakuin Kogaku Kenkyuka Biomolecular Engineering JAPAN
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3
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Kar A, Mannuthodikayil J, Singh S, Biswas A, Dubey P, Das A, Mandal K. Efficient Chemical Protein Synthesis using Fmoc-Masked N-Terminal Cysteine in Peptide Thioester Segments. Angew Chem Int Ed Engl 2020; 59:14796-14801. [PMID: 32333711 PMCID: PMC7891605 DOI: 10.1002/anie.202000491] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Revised: 03/27/2020] [Indexed: 01/23/2023]
Abstract
We report an operationally simple method to facilitate chemical protein synthesis by fully convergent and one-pot native chemical ligations utilizing the fluorenylmethyloxycarbonyl (Fmoc) moiety as an N-masking group of the N-terminal cysteine of the middle peptide thioester segment(s). The Fmoc group is stable to the harsh oxidative conditions frequently used to generate peptide thioesters from peptide hydrazide or o-aminoanilide. The ready availability of Fmoc-Cys(Trt)-OH, which is routinely used in Fmoc solid-phase peptide synthesis, where the Fmoc group is pre-installed on cysteine residue, minimizes additional steps required for the temporary protection of the N-terminal cysteinyl peptides. The Fmoc group is readily removed after ligation by short exposure (<7 min) to 20 % piperidine at pH 11 in aqueous conditions at room temperature. Subsequent native chemical ligation reactions can be performed in presence of piperidine in the same solution at pH 7.
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Affiliation(s)
- Abhisek Kar
- TIFR Centre for Interdisciplinary SciencesTata Institute of Fundamental Research Hyderabad36/p GopanpallyHyderabad500046TelanganaIndia
| | - Jamsad Mannuthodikayil
- TIFR Centre for Interdisciplinary SciencesTata Institute of Fundamental Research Hyderabad36/p GopanpallyHyderabad500046TelanganaIndia
| | - Sameer Singh
- TIFR Centre for Interdisciplinary SciencesTata Institute of Fundamental Research Hyderabad36/p GopanpallyHyderabad500046TelanganaIndia
| | - Anamika Biswas
- TIFR Centre for Interdisciplinary SciencesTata Institute of Fundamental Research Hyderabad36/p GopanpallyHyderabad500046TelanganaIndia
| | - Puneet Dubey
- TIFR Centre for Interdisciplinary SciencesTata Institute of Fundamental Research Hyderabad36/p GopanpallyHyderabad500046TelanganaIndia
| | - Amit Das
- Protein Crystallography Section, Radiation Biology and Health Sciences DivisionBhabha Atomic Research CentreTrombayMumbai400085India
- Homi Bhabha National InstituteAnushaktinagarMumbai400094India
| | - Kalyaneswar Mandal
- TIFR Centre for Interdisciplinary SciencesTata Institute of Fundamental Research Hyderabad36/p GopanpallyHyderabad500046TelanganaIndia
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4
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Wang Y, Yang SH, Brimble MA, Harris PWR. Recent Progress in the Synthesis of Homogeneous Erythropoietin (EPO) Glycoforms. Chembiochem 2020; 21:3301-3312. [DOI: 10.1002/cbic.202000347] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 06/29/2020] [Indexed: 11/10/2022]
Affiliation(s)
- Yuxin Wang
- School of Chemical Sciences The University of Auckland 23 Symonds Street Auckland 1010 New Zealand
| | - Sung H. Yang
- School of Chemical Sciences The University of Auckland 23 Symonds Street Auckland 1010 New Zealand
- School of Biological Sciences The University of Auckland 3 A Symonds St Auckland 1010 New Zealand
| | - Margaret A. Brimble
- School of Chemical Sciences The University of Auckland 23 Symonds Street Auckland 1010 New Zealand
- School of Biological Sciences The University of Auckland 3 A Symonds St Auckland 1010 New Zealand
- Maurice Wilkins Centre for Molecular Biodiscovery School of Biological Sciences The University of Auckland Auckland 1010 New Zealand
| | - Paul W. R. Harris
- School of Chemical Sciences The University of Auckland 23 Symonds Street Auckland 1010 New Zealand
- School of Biological Sciences The University of Auckland 3 A Symonds St Auckland 1010 New Zealand
- Maurice Wilkins Centre for Molecular Biodiscovery School of Biological Sciences The University of Auckland Auckland 1010 New Zealand
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5
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Kar A, Mannuthodikayil J, Singh S, Biswas A, Dubey P, Das A, Mandal K. Efficient Chemical Protein Synthesis using Fmoc‐Masked N‐Terminal Cysteine in Peptide Thioester Segments. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202000491] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Abhisek Kar
- TIFR Centre for Interdisciplinary Sciences Tata Institute of Fundamental Research Hyderabad 36/p Gopanpally Hyderabad Telangana −500046 India
| | - Jamsad Mannuthodikayil
- TIFR Centre for Interdisciplinary Sciences Tata Institute of Fundamental Research Hyderabad 36/p Gopanpally Hyderabad Telangana −500046 India
| | - Sameer Singh
- TIFR Centre for Interdisciplinary Sciences Tata Institute of Fundamental Research Hyderabad 36/p Gopanpally Hyderabad Telangana −500046 India
| | - Anamika Biswas
- TIFR Centre for Interdisciplinary Sciences Tata Institute of Fundamental Research Hyderabad 36/p Gopanpally Hyderabad Telangana −500046 India
| | - Puneet Dubey
- TIFR Centre for Interdisciplinary Sciences Tata Institute of Fundamental Research Hyderabad 36/p Gopanpally Hyderabad Telangana −500046 India
| | - Amit Das
- Protein Crystallography Section, Radiation Biology and Health Sciences Division Bhabha Atomic Research Centre Trombay Mumbai 400085 India
- Homi Bhabha National Institute Anushaktinagar Mumbai 400094 India
| | - Kalyaneswar Mandal
- TIFR Centre for Interdisciplinary Sciences Tata Institute of Fundamental Research Hyderabad 36/p Gopanpally Hyderabad Telangana −500046 India
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6
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Zhao Z, Metanis N. Copper‐Mediated Selenazolidine Deprotection Enables One‐Pot Chemical Synthesis of Challenging Proteins. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201909484] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Zhenguang Zhao
- Institute of Chemistry The Hebrew University of Jerusalem Edmond J. Safra, Givat Ram Jerusalem 91904 Israel
| | - Norman Metanis
- Institute of Chemistry The Hebrew University of Jerusalem Edmond J. Safra, Givat Ram Jerusalem 91904 Israel
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7
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Zhao Z, Metanis N. Copper-Mediated Selenazolidine Deprotection Enables One-Pot Chemical Synthesis of Challenging Proteins. Angew Chem Int Ed Engl 2019; 58:14610-14614. [PMID: 31408267 DOI: 10.1002/anie.201909484] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2019] [Indexed: 12/25/2022]
Abstract
While chemical protein synthesis has granted access to challenging proteins, the synthesis of longer proteins is often limited by low abundance or non-strategic placement of cysteine residues, which are essential for native chemical ligations, as well as multiple purification and isolation steps. We describe the one-pot total synthesis of human thiosulfate:glutathione sulfurtransferase (TSTD1). WT-TSTD1 was synthesized in a C-to-N synthetic approach involving multiple NCL reactions, CuII -mediated deprotection of selenazolidine (Sez), and chemoselective deselenization. The seleno-analog Se-TSTD1, in which the active site Cys is replaced with selenocysteine, was also synthesized with a kinetically controlled ligation with an N-to-C synthetic approach. The catalytic activity of the two proteins indicated that Se-TSTD1 possessed only four-fold lower activity than WT-TSTD1, thus suggesting that selenoproteins can have physiologically comparable sulfutransferase activity to their cysteine counterparts.
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Affiliation(s)
- Zhenguang Zhao
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra, Givat Ram, Jerusalem, 91904, Israel
| | - Norman Metanis
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra, Givat Ram, Jerusalem, 91904, Israel
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8
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Jbara M, Maity SK, Brik A. Examining Several Strategies for the Chemical Synthesis of Phosphorylated Histone H3 Reveals the Effectiveness of the Convergent Approach. European J Org Chem 2019. [DOI: 10.1002/ejoc.201900257] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Muhammad Jbara
- Schulich Faculty of Chemistry; Technion-Israel Institute of Technology; 3200008 Haifa Israel
| | - Suman Kumar Maity
- Schulich Faculty of Chemistry; Technion-Israel Institute of Technology; 3200008 Haifa Israel
| | - Ashraf Brik
- Schulich Faculty of Chemistry; Technion-Israel Institute of Technology; 3200008 Haifa Israel
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9
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Yang YH, Di B, Yang DS. The discovery of a freezing-induced peptide ligation during the total chemical synthesis of human interferon-ε. Org Biomol Chem 2019; 16:5097-5101. [PMID: 29972388 DOI: 10.1039/c8ob01365a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A counterintuitive freezing-induced peptide ligation was discovered during the total synthesis of human interferon-ε (hIFN-ε) which blocks HIV infection through unique mechanisms. The successful synthesis of hIFN-ε (187 amino acids) in this research laid the foundation for related anti-AIDS drug development. Moreover, alanine mutation based on sequence alignment to solve the maldistribution of the ligation site and freezing-induced dominant conformation that facilitates peptide ligation are expected to be helpful for the synthesis of macrobiomolecules.
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Affiliation(s)
- Yin-He Yang
- Jiang Su Key Laboratory of Drug Design and Optimization, Key Laboratory on Protein Chemistry and Structural Biology, China Pharmaceutical University, Nanjing 210009, China.
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10
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Asahina Y, Kawakami T, Hojo H. Glycopeptide Synthesis Based on a TFA-Labile Protection Strategy and One-Pot Four-Segment Ligation for the Synthesis of O-Glycosylated Histone H2A. European J Org Chem 2019. [DOI: 10.1002/ejoc.201801885] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Yuya Asahina
- Institute for Protein Research; Osaka University; Yamadaoka 3-2, Suita Osaka 565-0871 Japan
| | - Toru Kawakami
- Institute for Protein Research; Osaka University; Yamadaoka 3-2, Suita Osaka 565-0871 Japan
| | - Hironobu Hojo
- Institute for Protein Research; Osaka University; Yamadaoka 3-2, Suita Osaka 565-0871 Japan
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11
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Palà‐Pujadas J, Albericio F, Blanco‐Canosa JB. Peptide Ligations by Using Aryloxycarbonyl‐
o
‐methylaminoanilides: Chemical Synthesis of Palmitoylated Sonic Hedgehog. Angew Chem Int Ed Engl 2018; 57:16120-16125. [DOI: 10.1002/anie.201810712] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2018] [Indexed: 11/10/2022]
Affiliation(s)
- Judith Palà‐Pujadas
- Institute for Research in Biomedicine (IRB Barcelona)The Barcelona Institute of Science and Technology (BIST) Baldiri Reixac 10 08028 Barcelona Spain
| | - Fernando Albericio
- Institute for Research in Biomedicine (IRB Barcelona)The Barcelona Institute of Science and Technology (BIST) Baldiri Reixac 10 08028 Barcelona Spain
- CIBER-BBNNetworking Centre on Bioengineering, Biomaterials and Nanomedicine Baldiri Reixac 10 08028 Barcelona Spain
- Department of Organic ChemistryUniversity of Barcelona 08028 Barcelona Spain
- School of Chemistry and PhysicsUniversity of KwaZulu-Natal University Road, Westville Durban 4001 South Africa
| | - Juan B. Blanco‐Canosa
- Institute for Research in Biomedicine (IRB Barcelona)The Barcelona Institute of Science and Technology (BIST) Baldiri Reixac 10 08028 Barcelona Spain
- Present address: Spanish National Research Council (CSIC)Institute of Advanced Chemistry of Catalonia (IQAC)Department of Biological Chemistry Jordi Girona 18–26 08034 Barcelona Spain
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12
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Peptide Ligations by Using Aryloxycarbonyl‐
o
‐methylaminoanilides: Chemical Synthesis of Palmitoylated Sonic Hedgehog. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201810712] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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13
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Takei T, Andoh T, Takao T, Hojo H. One-Pot Four-Segment Ligation Using Seleno- and Thioesters: Synthesis of Superoxide Dismutase. Angew Chem Int Ed Engl 2017; 56:15708-15711. [PMID: 29048715 DOI: 10.1002/anie.201709418] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2017] [Revised: 10/12/2017] [Indexed: 12/13/2022]
Abstract
The synthesis of a peptide selenoester was efficiently carried out by the 9-fluorenylmethoxycarbonyl (Fmoc) method using N-alkylcysteine, at the C-terminus of the peptide, as the N-to-S acyl shift device. The selenoester selectively reacted with the terminal amino group of the peptide aryl thioester in the presence of N,N-diisopropylethylamine and dipyridyldisulfide, thus leaving the aryl thioester intact. Combined with silver-ion-promoted and silver-ion-free thioester activation methods, a one-pot four-segment ligation was realized. The method was successfully used to assemble the entire sequence of superoxide dismutase (SOD), which is composed of 153 amino-acid residues, in one pot. After the folding reaction, the fully active SOD was obtained.
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Affiliation(s)
- Toshiki Takei
- Institute for Protein Research, Osaka University, Osaka, 565-0871, Japan
| | - Tomoshige Andoh
- Institute for Protein Research, Osaka University, Osaka, 565-0871, Japan
| | - Toshifumi Takao
- Institute for Protein Research, Osaka University, Osaka, 565-0871, Japan
| | - Hironobu Hojo
- Institute for Protein Research, Osaka University, Osaka, 565-0871, Japan
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14
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One-Pot Four-Segment Ligation Using Seleno- and Thioesters: Synthesis of Superoxide Dismutase. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201709418] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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15
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Orii R, Sakamoto N, Fukami D, Tsuda S, Izumi M, Kajihara Y, Okamoto R. Total Synthesis of O
-GalNAcylated Antifreeze Glycoprotein using the Switchable Reactivity of Peptidyl-N
-pivaloylguanidine. Chemistry 2017; 23:9253-9257. [DOI: 10.1002/chem.201702243] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2017] [Indexed: 01/06/2023]
Affiliation(s)
- Ryo Orii
- Department of Chemistry; Graduate School of Science, Osaka University; 1-1, Toyonaka Osaka 5600043 Japan
| | - Noriko Sakamoto
- Department of Chemistry; Graduate School of Science, Osaka University; 1-1, Toyonaka Osaka 5600043 Japan
| | - Daichi Fukami
- Transdisciplinary Life Science Course; Graduate School of Life Science; Hokkaido University and Bioproduction Research Institute; National Institute of Advanced Industrial Science and Technology (AIST); 2-17-2-1 Tsukisamu-Higashi, Toyohira, Sapporo Hokkaido 0628517 Japan
| | - Sakae Tsuda
- Transdisciplinary Life Science Course; Graduate School of Life Science; Hokkaido University and Bioproduction Research Institute; National Institute of Advanced Industrial Science and Technology (AIST); 2-17-2-1 Tsukisamu-Higashi, Toyohira, Sapporo Hokkaido 0628517 Japan
| | - Masayuki Izumi
- Department of Chemistry; Graduate School of Science, Osaka University; 1-1, Toyonaka Osaka 5600043 Japan
| | - Yasuhiro Kajihara
- Department of Chemistry; Graduate School of Science, Osaka University; 1-1, Toyonaka Osaka 5600043 Japan
| | - Ryo Okamoto
- Department of Chemistry; Graduate School of Science, Osaka University; 1-1, Toyonaka Osaka 5600043 Japan
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16
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Raz R, Burlina F, Ismail M, Downward J, Li J, Smerdon SJ, Quibell M, White PD, Offer J. HF-Free Boc Synthesis of Peptide Thioesters for Ligation and Cyclization. Angew Chem Int Ed Engl 2016; 55:13174-13179. [PMID: 27654901 PMCID: PMC5113665 DOI: 10.1002/anie.201607657] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2016] [Indexed: 01/03/2023]
Abstract
We have developed a convenient method for the direct synthesis of peptide thioesters, versatile intermediates for peptide ligation and cyclic peptide synthesis. The technology uses a modified Boc SPPS strategy that avoids the use of anhydrous HF. Boc in situ neutralization protocols are used in combination with Merrifield hydroxymethyl resin and TFA/TMSBr cleavage. Avoiding HF extends the scope of Boc SPPS to post-translational modifications that are compatible with the milder cleavage conditions, demonstrated here with the synthesis of the phosphorylated protein CHK2. Peptide thioesters give easy, direct, access to cyclic peptides, illustrated by the synthesis of cyclorasin, a KRAS inhibitor.
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Affiliation(s)
- Richard Raz
- The Francis Crick Institute, 1 Midland road, London, NW1 1AT, UK
| | - Fabienne Burlina
- Sorbonne Universités, UPMC Univ Paris 06, ENS, CNRS, Laboratoire des Biomolécules (LBM), Paris, France
- Département de Chimie, ENS, PSL Research University, UPMC, Univ Paris 06, CNRS, LBM, Paris, France
| | - Mohamed Ismail
- The Francis Crick Institute, 1 Midland road, London, NW1 1AT, UK
| | - Julian Downward
- The Francis Crick Institute, 1 Midland road, London, NW1 1AT, UK
| | - Jiejin Li
- The Francis Crick Institute, 1 Midland road, London, NW1 1AT, UK
| | | | - Martin Quibell
- The Francis Crick Institute, 1 Midland road, London, NW1 1AT, UK
| | - Peter D White
- Merck Chemicals, Padge Road, Beeston, Notts, NG9 2JR, UK
| | - John Offer
- The Francis Crick Institute, 1 Midland road, London, NW1 1AT, UK.
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Raz R, Burlina F, Ismail M, Downward J, Li J, Smerdon SJ, Quibell M, White PD, Offer J. HF-Free Boc Synthesis of Peptide Thioesters for Ligation and Cyclization. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201607657] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Richard Raz
- The Francis Crick Institute; 1 Midland road London NW1 1AT UK
| | - Fabienne Burlina
- Sorbonne Universités, UPMC Univ Paris 06, ENS, CNRS; Laboratoire des Biomolécules (LBM); Paris France
- Département de Chimie, ENS; PSL Research University, UPMC, Univ Paris 06, CNRS, LBM; Paris France
| | - Mohamed Ismail
- The Francis Crick Institute; 1 Midland road London NW1 1AT UK
| | - Julian Downward
- The Francis Crick Institute; 1 Midland road London NW1 1AT UK
| | - Jiejin Li
- The Francis Crick Institute; 1 Midland road London NW1 1AT UK
| | | | - Martin Quibell
- The Francis Crick Institute; 1 Midland road London NW1 1AT UK
| | | | - John Offer
- The Francis Crick Institute; 1 Midland road London NW1 1AT UK
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18
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Pardo A, Hogenauer TJ, Cai Z, Vellucci JA, Castillo EM, Dirk CW, Franz AH, Michael K. Efficient Photochemical Synthesis of Peptide-α-Phenylthioesters. Chembiochem 2015; 16:1884-1889. [DOI: 10.1002/cbic.201500266] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2015] [Indexed: 01/16/2023]
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Tsuji K, Tanegashima K, Sato K, Sakamoto K, Shigenaga A, Inokuma T, Hara T, Otaka A. Efficient one-pot synthesis of CXCL14 and its derivative using an N-sulfanylethylanilide peptide as a peptide thioester equivalent and their biological evaluation. Bioorg Med Chem 2015; 23:5909-14. [PMID: 26187016 DOI: 10.1016/j.bmc.2015.06.064] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2015] [Revised: 06/23/2015] [Accepted: 06/24/2015] [Indexed: 02/07/2023]
Abstract
CXCL14 is a CXC-type chemokine that exhibits chemotactic activity for immature dendritic cells, activated macrophages, and activated natural killer cells. However, its specific receptor and signaling pathway remain obscure. Recently, it was reported that CXCL14 binds to CXCR4 with high affinity and inhibits CXCL12-mediated chemotaxis. Furthermore, the CXCL14 C-terminal α-helical region is important for binding to its receptor. In this context, we chemically synthesized CXCL14 and its derivative with a one-pot method using N-sulfanylethylanilide peptide as a thioester equivalent. The synthetic CXCL14 proteins possessed inhibitory activities to CXCL12-mediated chemotaxis comparable with that of recombinant CXCL14. Moreover, we proved that chemically biotinylated CXCL14 binds to CXCR4 on cells by flow cytometry analysis.
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Affiliation(s)
- Kohei Tsuji
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences, Tokushima University, Shomachi, Tokushima 770-8505, Japan
| | - Kosuke Tanegashima
- Stem Cell Project, Tokyo Metropolitan Institute of Medical Science, Kamikitazawa, Setagaya-ku, Tokyo 156-8506, Japan
| | - Kohei Sato
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences, Tokushima University, Shomachi, Tokushima 770-8505, Japan
| | - Ken Sakamoto
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences, Tokushima University, Shomachi, Tokushima 770-8505, Japan
| | - Akira Shigenaga
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences, Tokushima University, Shomachi, Tokushima 770-8505, Japan
| | - Tsubasa Inokuma
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences, Tokushima University, Shomachi, Tokushima 770-8505, Japan
| | - Takahiko Hara
- Stem Cell Project, Tokyo Metropolitan Institute of Medical Science, Kamikitazawa, Setagaya-ku, Tokyo 156-8506, Japan.
| | - Akira Otaka
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences, Tokushima University, Shomachi, Tokushima 770-8505, Japan.
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Seenaiah M, Jbara M, Mali SM, Brik A. Convergent Versus Sequential Protein Synthesis: The Case of Ubiquitinated and Glycosylated H2B. Angew Chem Int Ed Engl 2015; 54:12374-8. [DOI: 10.1002/anie.201503309] [Citation(s) in RCA: 79] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2015] [Revised: 05/13/2015] [Indexed: 11/11/2022]
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21
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Seenaiah M, Jbara M, Mali SM, Brik A. Convergent Versus Sequential Protein Synthesis: The Case of Ubiquitinated and Glycosylated H2B. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201503309] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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22
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Tang S, Si YY, Wang ZP, Mei KR, Chen X, Cheng JY, Zheng JS, Liu L. An Efficient One-Pot Four-Segment Condensation Method for Protein Chemical Synthesis. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201500051] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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23
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Tang S, Si YY, Wang ZP, Mei KR, Chen X, Cheng JY, Zheng JS, Liu L. An efficient one-pot four-segment condensation method for protein chemical synthesis. Angew Chem Int Ed Engl 2015; 54:5713-7. [PMID: 25772600 DOI: 10.1002/anie.201500051] [Citation(s) in RCA: 115] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2015] [Revised: 02/10/2015] [Indexed: 12/18/2022]
Abstract
Successive peptide ligation using a one-pot method can improve the efficiency of protein chemical synthesis. Although one-pot three-segment ligation has enjoyed widespread application, a robust method for one-pot four-segment ligation had to date remained undeveloped. Herein we report a new one-pot multisegment peptide ligation method that can be used to condense up to four segments with operational simplicity and high efficiency. Its practicality is demonstrated by the one-pot four-segment synthesis of a plant protein, crambin, and a human chemokine, hCCL21.
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Affiliation(s)
- Shan Tang
- Tsinghua-Peking Center for Life Sciences, Department of Chemistry, Tsinghua University, Beijing 100084 (China)
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24
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Kuhlmann M, Reimann O, Hackenberger CPR, Groll J. Cysteine-Functional Polymers via Thiol-ene Conjugation. Macromol Rapid Commun 2015; 36:472-6. [DOI: 10.1002/marc.201400703] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2014] [Revised: 12/25/2014] [Indexed: 01/18/2023]
Affiliation(s)
- Matthias Kuhlmann
- Department for Functional Materials in Medicine and Dentistry; University of Würzburg; Pleicherwall 2 97070 Würzburg Germany
| | - Oliver Reimann
- Department Chemical Biology II; Leibniz-Institut für Molekulare Pharmakologie (FMP); Robert-Rössle-Strasse 10 13125 Berlin Germany
| | - Christian P. R. Hackenberger
- Department Chemical Biology II; Leibniz-Institut für Molekulare Pharmakologie (FMP); Robert-Rössle-Strasse 10 13125 Berlin Germany
- Department Chemie; Humboldt Universität zu Berlin; Brook-Taylor-Strasse 2 12489 Berlin Germany
| | - Jürgen Groll
- Department for Functional Materials in Medicine and Dentistry; University of Würzburg; Pleicherwall 2 97070 Würzburg Germany
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25
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Reif A, Siebenhaar S, Tröster A, Schmälzlein M, Lechner C, Velisetty P, Gottwald K, Pöhner C, Boos I, Schubert V, Rose-John S, Unverzagt C. Semisynthesis of biologically active glycoforms of the human cytokine interleukin 6. Angew Chem Int Ed Engl 2014; 53:12125-31. [PMID: 25243720 DOI: 10.1002/anie.201407160] [Citation(s) in RCA: 61] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2014] [Indexed: 12/16/2022]
Abstract
Human interleukin 6 (IL-6) is a potent cytokine with immunomodulatory properties. As the influence of N-glycosylation on the in vivo activities of IL-6 could not be elucidated so far, a semisynthesis of homogeneous glycoforms of IL-6 was established by sequential native chemical ligation. The four cysteines of IL-6 are convenient for ligations and require only the short synthetic glycopeptide 43-48. The Cys-peptide 49-183 could be obtained recombinantly by cleavage of a SUMO tag. The fragment 1-42 was accessible by the simultaneous cleavage of two inteins, leading to the 1-42 thioester with the native N-terminus. Ligation and refolding studies showed that the inherently labile Asp-Pro bond 139-140 was detrimental for the sequential C- to N-terminal ligation. A reversed ligation sequence using glycopeptide hydrazides gave full-length IL-6 glycoproteins, which showed full bioactivity after efficient refolding and purification.
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Affiliation(s)
- Andreas Reif
- Bioorganic Chemistry, Gebaeude NWI, University of Bayreuth, 95440 Bayreuth (Germany)
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26
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Reif A, Siebenhaar S, Tröster A, Schmälzlein M, Lechner C, Velisetty P, Gottwald K, Pöhner C, Boos I, Schubert V, Rose-John S, Unverzagt C. Semisynthesis of Biologically Active Glycoforms of the Human Cytokine Interleukin 6. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201407160] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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27
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Chen Z, Grzybowski AT, Ruthenburg AJ. Traceless semisynthesis of a set of histone 3 species bearing specific lysine methylation marks. Chembiochem 2014; 15:2071-5. [PMID: 25155436 DOI: 10.1002/cbic.201402313] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2014] [Indexed: 12/25/2022]
Abstract
Considerable mechanistic insight into the function of histone post-translational modifications and the enzymes that install and remove them derives from in vitro experiments with modified histones, often embedded in nucleosomes. We report the first semisyntheses of native-like histone 3 (H3) bearing tri- and dimethyllysines at position 79 and trimethyllysine at position 36, as well as more facile and traceless semisyntheses of K9 and K27 trimethylated species. These semisyntheses are practical on a multi-milligram scale and can also generate H3 with combinations of marks. Each of these modifications has distinct functional consequences, although the pathways by which H3K36me3 and H3K79me2/3 act have not been entirely mapped. To this end, we demonstrated that our semisynthetic histones, when reconstituted into nucleosomes, are valuable affinity reagents for unbiased binding partner discovery and compare them to their methyllysine analogue (MLA) counterparts at the nucleosome level.
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Affiliation(s)
- Zhonglei Chen
- Department of Molecular Genetics and Cell Biology, University of Chicago, 920 E. 58th St, Chicago, IL 60637 (USA)
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28
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Seki Y, Tanabe K, Sasaki D, Sohma Y, Oisaki K, Kanai M. Serine-selective aerobic cleavage of peptides and a protein using a water-soluble copper-organoradical conjugate. Angew Chem Int Ed Engl 2014; 53:6501-5. [PMID: 24826926 DOI: 10.1002/anie.201402618] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2014] [Indexed: 01/02/2023]
Abstract
The site-specific cleavage of peptide bonds is an important chemical modification of biologically relevant macromolecules. The reaction is not only used for routine structural determination of peptides, but is also a potential artificial modulator of protein function. Realizing the substrate scope beyond the conventional chemical or enzymatic cleavage of peptide bonds is, however, a formidable challenge. Here we report a serine-selective peptide-cleavage protocol that proceeds at room temperature and near neutral pH value, through mild aerobic oxidation promoted by a water-soluble copper-organoradical conjugate. The method is applicable to the site-selective cleavage of polypeptides that possess various functional groups. Peptides comprising D-amino acids or sensitive disulfide pairs are competent substrates. The system is extendable to the site-selective cleavage of a native protein, ubiquitin, which comprises more than 70 amino acid residues.
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Affiliation(s)
- Yohei Seki
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo-ku, Tokyo 113-0033 (Japan)
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29
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Seki Y, Tanabe K, Sasaki D, Sohma Y, Oisaki K, Kanai M. Serine‐Selective Aerobic Cleavage of Peptides and a Protein Using a Water‐Soluble Copper–Organoradical Conjugate. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201402618] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Yohei Seki
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
| | - Kana Tanabe
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
- Japan Science and Technology Agency (JST), ERATO, Kanai Life Science Catalysis Project, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
| | - Daisuke Sasaki
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
- Japan Science and Technology Agency (JST), ERATO, Kanai Life Science Catalysis Project, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
| | - Youhei Sohma
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
- Japan Science and Technology Agency (JST), ERATO, Kanai Life Science Catalysis Project, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
| | - Kounosuke Oisaki
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
| | - Motomu Kanai
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
- Japan Science and Technology Agency (JST), ERATO, Kanai Life Science Catalysis Project, Bunkyo‐ku, Tokyo 113‐0033 (Japan)
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30
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Deng FK, Zhang L, Wang YT, Schneewind O, Kent SBH. Total Chemical Synthesis of the Enzyme Sortase AΔN59with Full Catalytic Activity. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201310900] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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31
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Total Chemical Synthesis of the Enzyme Sortase AΔN59with Full Catalytic Activity. Angew Chem Int Ed Engl 2014; 53:4662-6. [DOI: 10.1002/anie.201310900] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2013] [Indexed: 11/07/2022]
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32
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Mong SK, Vinogradov AA, Simon MD, Pentelute BL. Rapid total synthesis of DARPin pE59 and barnase. Chembiochem 2014; 15:721-33. [PMID: 24616257 DOI: 10.1002/cbic.201300797] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2013] [Indexed: 11/11/2022]
Abstract
We report the convergent total synthesis of two proteins: DARPin pE59 and Bacillus amyloliquefaciens RNase (Barnase). Leveraging our recently developed fast-flow peptide-synthesis platform, we rapidly explored numerous conditions for the assembly of long polypeptides, and were able to mitigate common side reactions, including deletion and aspartimide products. We report general strategies for improving the synthetic quality of difficult peptide sequences with our system. High-quality protein fragments produced under optimal synthetic conditions were subjected to convergent native chemical ligation, which afforded native full-length proteins after a final desulfurization step. Both DARPin and Barnase were folded and found to be as active as their recombinant analogues.
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Affiliation(s)
- Surin K Mong
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139 (USA)
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33
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Verzele D, Madder A. Patchwork protein chemistry: a practitioner's treatise on the advances in synthetic peptide stitchery. Chembiochem 2014; 14:1032-48. [PMID: 23775826 DOI: 10.1002/cbic.201200775] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2012] [Indexed: 12/22/2022]
Abstract
With the study of peptides and proteins at the heart of many scientific endeavors, the omics era heralded a multitude of opportunities for chemists and biologists alike. Across the interface with life sciences, peptide chemistry plays an indispensable role, and progress made over the past decades now allows proteins to be treated as molecular patchworks stitched together through synthetic tailoring. The continuous elaboration of sophisticated strategies notwithstanding, Merrifield's solid-phase methodology remains a cornerstone of chemical protein design. Although the non-practitioner might misjudge peptide synthesis as trivial, routine, or dull given its long history, we comment here on its many advances, obstacles, and prospects from a practitioner's point of view. While sharing our perspectives through thematic highlights across the literature, this treatise provides an interpretive overview as a guide to novices, and a recap for specialists.
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Affiliation(s)
- Dieter Verzele
- Organic and Biomimetic Chemistry Research Group, Department of Organic Chemistry, Faculty of Sciences, Ghent University, Krijgslaan 281 (S4), 9000 Ghent, Belgium.
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34
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Popovic S, Bieräugel H, Detz RJ, Kluwer AM, Koole JAA, Streefkerk DE, Hiemstra H, van Maarseveen JH. Epimerization-Free C-Terminal Peptide Activation. Chemistry 2013; 19:16934-7. [DOI: 10.1002/chem.201303347] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2013] [Indexed: 11/05/2022]
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35
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Kent SBH. Die Wissenschaft von Proteinen im Reich der organischen Chemie begründen: Totalsynthese von SEP (synthetisches Erythropoeseprotein). Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201304116] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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36
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Kent SBH. Bringing the science of proteins into the realm of organic chemistry: total chemical synthesis of SEP (synthetic erythropoiesis protein). Angew Chem Int Ed Engl 2013; 52:11988-96. [PMID: 24127351 DOI: 10.1002/anie.201304116] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2013] [Indexed: 12/21/2022]
Abstract
Erythropoietin, commonly known as EPO, is a glycoprotein hormone that stimulates the production of red blood cells. Recombinant EPO has been described as "arguably the most successful drug spawned by the revolution in recombinant DNA technology". Recently, the EPO glycoprotein molecule has re-emerged as a major target of synthetic organic chemistry. In this article I will give an account of an important body of earlier work on the chemical synthesis of a designed EPO analogue that had full biological activity and improved pharmacokinetic properties. The design and synthesis of this "synthetic erythropoiesis protein" was ahead of its time, but has gained new relevance in recent months. Here I will document the story of one of the major accomplishments of synthetic chemistry in a more complete way than is possible in the primary literature, and put the work in its contemporaneous context.
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Affiliation(s)
- Stephen B H Kent
- Department of Chemistry, University of Chicago, Chicago, IL 60637 (USA) http://chemistry.uchicago.edu/faculty/faculty/person/member/stephen-bh-kent.html.
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37
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Wilson RM, Dong S, Wang P, Danishefsky SJ. The winding pathway to erythropoietin along the chemistry-biology frontier: a success at last. Angew Chem Int Ed Engl 2013; 52:7646-65. [PMID: 23775885 PMCID: PMC4729195 DOI: 10.1002/anie.201301666] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2013] [Indexed: 11/09/2022]
Abstract
The total synthesis of a homogeneous erythropoietin (EPO), possessing the native amino acid sequence and chitobiose glycans at each of the three wild-type sites of N glycosylation, has been accomplished in our laboratory. We provide herein an account of our decade-long research effort en route to this formidable target compound. The optimization of the synergy of the two bedrock sciences we now call biology and chemistry was central to the success of the synthesis of EPO.
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Affiliation(s)
- Rebecca M. Wilson
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065
| | - Suwei Dong
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065
| | - Ping Wang
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065
| | - Samuel J. Danishefsky
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065
- Department of Chemistry, Columbia University, Havemeyer Hall, 3000 Broadway, New York, NY 10027
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38
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Asahina Y, Kamitori S, Takao T, Nishi N, Hojo H. Chemoenzymatic Synthesis of the Immunoglobulin Domain of Tim-3 Carrying a Complex-Type N-Glycan by Using a One-pot Ligation. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201303073] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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39
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Asahina Y, Kamitori S, Takao T, Nishi N, Hojo H. Chemoenzymatic Synthesis of the Immunoglobulin Domain of Tim-3 Carrying a Complex-Type N-Glycan by Using a One-pot Ligation. Angew Chem Int Ed Engl 2013; 52:9733-7. [DOI: 10.1002/anie.201303073] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2013] [Revised: 05/29/2013] [Indexed: 01/05/2023]
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40
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Siman P, Karthikeyan SV, Nikolov M, Fischle W, Brik A. Convergent Chemical Synthesis of Histone H2B Protein for the Site-Specific Ubiquitination at Lys34. Angew Chem Int Ed Engl 2013; 52:8059-63. [DOI: 10.1002/anie.201303844] [Citation(s) in RCA: 113] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2013] [Indexed: 12/11/2022]
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41
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Siman P, Karthikeyan SV, Nikolov M, Fischle W, Brik A. Convergent Chemical Synthesis of Histone H2B Protein for the Site-Specific Ubiquitination at Lys34. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201303844] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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42
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Wilson RM, Dong S, Wang P, Danishefsky SJ. Der gewundene Pfad zum Erythropoietin entlang der Grenze von Chemie und Biologie. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201301666] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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43
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Sato K, Shigenaga A, Kitakaze K, Sakamoto K, Tsuji D, Itoh K, Otaka A. Chemical Synthesis of Biologically Active Monoglycosylated GM2-Activator Protein Analogue UsingN-Sulfanylethylanilide Peptide. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201303390] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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44
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Sato K, Shigenaga A, Kitakaze K, Sakamoto K, Tsuji D, Itoh K, Otaka A. Chemical synthesis of biologically active monoglycosylated GM2-activator protein analogue using N-sulfanylethylanilide peptide. Angew Chem Int Ed Engl 2013; 52:7855-9. [PMID: 23765733 DOI: 10.1002/anie.201303390] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2013] [Revised: 05/15/2013] [Indexed: 12/26/2022]
Abstract
Going to SEA(lide): Total chemical synthesis of a 162-residue glycoprotein analogue of the monoglycosylated human GM2-activator protein (GM2AP) was achieved. Key steps were the use of N-sulfanylethylanilide (SEAlide) peptides in the kinetic chemical ligation synthesis of a large peptide fragment, and a convergent native chemical ligation for final fragment assembly.
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Affiliation(s)
- Kohei Sato
- Institute of Health Bioscience and Graduate School of Pharmaceutical Sciences, The University of Tokushima, Shomachi, Tokushima 770-8505, Japan
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45
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Malins LR, Cergol KM, Payne RJ. Peptide Ligation-Desulfurization Chemistry at Arginine. Chembiochem 2013; 14:559-63. [DOI: 10.1002/cbic.201300049] [Citation(s) in RCA: 79] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2012] [Indexed: 11/10/2022]
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46
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Wintermann F, Engelbrecht S. Rekonstitution des katalytischen (αβ)3γ-Kernkomplexes der F-ATPase ausEscherichia colimithilfe der chemisch synthetisierten Untereinheit γ. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201206744] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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47
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Wintermann F, Engelbrecht S. Reconstitution of the catalytic core of F-ATPase (αβ)3γ from Escherichia coli using chemically synthesized subunit γ. Angew Chem Int Ed Engl 2012; 52:1309-13. [PMID: 23212931 DOI: 10.1002/anie.201206744] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2012] [Indexed: 11/08/2022]
Affiliation(s)
- Frank Wintermann
- Universität Osnabrück, Fachbereich Biologie/Chemie, Abt. Biochemie, Barbarastrasse 13, 49076 Osnabrück, Germany.
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48
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Wang P, Dong S, Brailsford JA, Iyer K, Townsend SD, Zhang Q, Hendrickson RC, Shieh J, Moore MAS, Danishefsky SJ. At last: erythropoietin as a single glycoform. Angew Chem Int Ed Engl 2012; 51:11576-84. [PMID: 23012228 PMCID: PMC3500780 DOI: 10.1002/anie.201206090] [Citation(s) in RCA: 69] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2012] [Indexed: 01/21/2023]
Affiliation(s)
- Ping Wang
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA)
| | - Suwei Dong
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA)
| | - John A. Brailsford
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA)
| | - Karthik Iyer
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA)
| | - Steven D. Townsend
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA)
| | - Qiang Zhang
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA)
| | - Ronald C. Hendrickson
- Department of Pharmacology and Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA)
| | - JaeHung Shieh
- Cell Biology Program, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA)
| | - Malcolm A. S. Moore
- Cell Biology Program, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA)
| | - Samuel J. Danishefsky
- Laboratory for Bioorganic Chemistry, Sloan-Kettering Institute for Cancer Research, 1275 York Avenue, New York, NY 10065 (USA). Department of Chemistry, Columbia University, 3000 Broadway, New York, NY 10027
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49
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Wang P, Dong S, Brailsford JA, Iyer K, Townsend SD, Zhang Q, Hendrickson RC, Shieh J, Moore MAS, Danishefsky SJ. At Last: Erythropoietin as a Single Glycoform. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201206090] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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50
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Fang GM, Wang JX, Liu L. Convergent Chemical Synthesis of Proteins by Ligation of Peptide Hydrazides. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201203843] [Citation(s) in RCA: 56] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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