Elucidation of Mg²⁺ binding activity of adenylate kinase from Mycobacterium tuberculosis H₃₇Rv using fluorescence studies

Metal oxide nanoparticles resonate to ammonium removal through influencing Mg2+ absorption by Pseudomonas putida Y-9

Most metal oxide nanoparticles (NPs) can impact ammonium removal, but the underlying mechanism remains unclear. In this study, high doses of NiO, CuO, ZnO and TiO₂ (>1 mg/L) inhibited the ammonium removal performance of Pseudomonas putida Y-9. Interestingly, low levels of CuO NPs (0.1, 0.5 mg/L) and NiO NPs (0.1 mg/L) enhanced ammonium removal efficiency. Moreover, a decrease in Mg²⁺ levels was significantly positively correlated with ammonium removal efficiency, while negatively correlated with the Ti²⁺, Zn²⁺, and Cu²⁺ release of NPs. Further research on effect of NPs and their corresponding cations on ammonium removal revealed that four NPs affected Mg²⁺ absorption in Y-9 via different routes, thus impacting NH₄⁺ removal efficiency, i.e., the effect of NiO NPs was caused by itself, TiO₂ NPs' impact was solely due to the release Ti⁴⁺, while the influence of CuO NPs and ZnO NPs was based on both the particles and released ions.

Ca(II) and Mg(II) significantly enhanced the nitrogen removal capacity of Arthrobacter arilaitensis relative to Zn(II) and Ni(II)

This study investigated the impacts of alkaline-earth metals [Ca(II), Mg(II)] and heavy metals [Zn(II), Ni(II)] on the nitrogen removal capacity of Arthrobacter arilaitensis Y-10. StrainY-10 was able to tolerate 20 mg/L Ca(II) and its ammonium removal efficiency was 100%. 0.5 mg/L Ca(II) effectively promoted total nitrogen removal from wastewater containing nitrite. Mg(II) supplementation substantially enhanced the bacterial growth and nitrogen reduction. As Mg(II) concentrations increased from 0 to 2 mg/L, the ammonium, nitrate and nitrite removal efficiencies increased by 40.62%, 69.91% and 64.68%, respectively. Although the nitrogen removal ability of strain Y-10 was sharply hindered by Zn(II) and Ni(II), it occurred continuously even when the Zn(II) concentration reached 30 mg/L. However, the ammonium and total nitrogen removal almost stopped at 8 mg/L Ni(II), and the denitrification capacity was lost when the Ni(II) concentration exceeded 1 mg/L. The results demonstrate that Ca(II) and especially Mg(II) could significantly enhance the nitrogen removal capacity of Arthrobacter arilaitensis relative to Zn(II) and Ni(II).

Investigating the effect of copper and magnesium ions on nitrogen removal capacity of pure cultures by modified non-competitive inhibition model

Copper, a common heavy metal, may be beneficial for or poisonous to microbial activity. The objective of this study was to determine the effect of different copper ion concentrations on the nitrogen removal performance of Arthrobacter arilaitensis strain Y-10 and Pseudomonas taiwanensis strain J488. The non-competitive inhibition model was employed to evaluate the 50% inhibition concentrations (IC₅₀ values) of copper ions toward the pure strains. In the absence of magnesium ions, a low concentration of copper (0.1 mg/L) significantly enhanced the ammonium removal ability of strain Y-10 and its removal efficiency increased by 10.88% compared with the control treatment. Copper ranging from 0 to 0.1 mg/L had no significant effect on the ammonium removal capacity of strain J488. After adding 9.90 mg/L of magnesium to the basal medium, the effects of copper on nitrification of ammonium or denitrification of nitrate or nitrite were also assessed. In these conditions, 0.25 mg/L copper ions could strongly inhibit the ammonium, nitrate and nitrite removal activities for strain Y-10. For strain J488, no clear deterioration in ammonium removal efficiency was observed at copper ion concentrations below 0.5 mg/L, but 0.25 mg/L copper ions significantly inhibited nitrate and nitrite removal efficiencies, which were only 45.88% and 6.35%, respectively. The IC₅₀ values of copper ions for nitrate and nitrite removal by strain Y-10 were 0.195 and 0.090 mg/L respectively; for strain J488, the IC₅₀ values were 0.175 and 0.196 mg/L. The magnesium ions could improve the cell growth, nitrogen removal efficiency and copper ion resistance of bacteria.

Fluorescent probes for the detection of magnesium ions (Mg2+): from design to application

Magnesium ions (Mg2+) play essential roles in various physiological and pathological processes, its abnormal homeostasis in cells is related to many diseases, such as diabetes, neuromuscular disorders, hypertension and other cardiovascular disorders. Investigation on the regulation of magnesium in cellular processes has attracted considerable interest in the past several decades. Among those reported strategies, fluorescent imaging technology has become a powerful and cost-effective tool for the real-time monitoring of magnesium distribution, uptake and trafficking, due to its superior features of high sensitivity and non-invasiveness, as well as excellent spatial and temporal fidelity. Herein, we critically summarize the progresses in the intracellular magnesium detection with fluorescent imaging probes. Our discussion focuses on the recent contributions concerning fluorescent imaging probes for mapping magnesium in biological processes. All the candidates are organized according to their acceptor structures. The sensing mechanisms of fluorescent probes are also highly taken into account. Challenges, trends and prospects of fluorescent imaging technology in magnesium detection are also set forth.

Cloning and characterization of a novel PE_PGRS60 protein (Rv3652) of Mycobacterium tuberculosis H37 Rv exhibit fibronectin-binding property

The binding of pathogenic bacteria to extracellular matrix components enhances adhesion and invasion of host cells. The host receptor proteins such as fibronectin (Fn) targeted to pathogenic ligands that have clinical importance. In the present study, we cloned, expressed, purified, and identified a novel Fn-binding protein from PE_PGRS60 (Rv3652) of Mycobacterium tuberculosis H37 Rv. The protein product of Rv3652 showed optimum binding efficiency to 10 ng Fn at 0.2 µg purified protein of PE_PGRS60 and 20 ng Fn at 0.2 µg concentrations, respectively. PE_PGRS60 protein (primary sequences) of different pathogenic mycobacterium species retrieved from NCBI exhibited complete homology at the 104 residues on multiple sequence alignment. The primary sequence of protein from H37 Rv was further used to predict cleavage signals. The secondary structure prediction method revealed a number of residues responsible for alpha helices formation and percentage of residues participating in the random coils and extended strands. In addition, online prediction tools such as B- and T-cell epitopes showed the surface probability scale and antigenic propensity scale. The current finding opens new opportunity to mycobacterial survival and pathogenesis research of PE-polymorphic GC-rich repetitive sequences (PE-PGRS) family proteins.

Development of Functional Fluorescent Molecular Probes for the Detection of Biological Substances

This review is confined to sensors that use fluorescence to transmit biochemical information. Fluorescence is, by far, the most frequently exploited phenomenon for chemical sensors and biosensors. Parameters that define the application of such sensors include intensity, decay time, anisotropy, quenching efficiency, and luminescence energy transfer. To achieve selective (bio)molecular recognition based on these fluorescence phenomena, various fluorescent elements such as small organic molecules, enzymes, antibodies, and oligonucleotides have been designed and synthesized over the past decades. This review describes the immense variety of fluorescent probes that have been designed for the recognitions of ions, small and large molecules, and their biological applications in terms of intracellular fluorescent imaging techniques.

Expression and characterization of Rv0447c product, potentially the methyltransferase involved in tuberculostearic acid biosynthesis in Mycobacterium tuberculosis

In this study, a previously uncharacterized gene (Rv0447c) of Mycobacterium tuberculosis, designated as an unknown fatty-acid methyltransferase (ufaA1), was cloned, expressed in Escherichia coli, and purified. The biochemical characterization of the purified protein (UfaA1) showed it to be a methyltransferase that catalyzes biosynthesis of the tuberculostearic acid (10-methylstearic-acid, TSA), a significant constituent lipid of the mycobacterial cell wall and a clinical marker of the disease. Here, we show that UfaA1 transfers the methyl group from S-adenosyl-l-methionine (SAM) to the double bond of oleic acid in phosphatidylethanolamine or phosphatidylcholine to produce TSA. Optimal activity was obtained between pH 7.0 and pH 8.0. The methyltransferase activity of UfaA1 was severely inhibited by S-adenosyl-l-homocysteine. The Km values for dioleyl phosphatidylethanolamine, SAM, and nicotinamide adenine dinucleotide phosphate were 14, 13, and 83 µM, respectively, with Vmax of 1.3-1.6 nmol/Min. These results identify the Rv0447c gene product of M. tuberculosis as the methyltransferase that catalyzes the biosynthesis of TSA. This provides new information in mycobacterial cell wall synthesis.