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Marques HM. The inorganic chemistry of the cobalt corrinoids - an update. J Inorg Biochem 2023; 242:112154. [PMID: 36871417 DOI: 10.1016/j.jinorgbio.2023.112154] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2023] [Revised: 01/23/2023] [Accepted: 01/26/2023] [Indexed: 02/05/2023]
Abstract
The inorganic chemistry of the cobalt corrinoids, derivatives of vitamin B12, is reviewed, with particular emphasis on equilibrium constants for, and kinetics of, their axial ligand substitution reactions. The role the corrin ligand plays in controlling and modifying the properties of the metal ion is emphasised. Other aspects of the chemistry of these compounds, including their structure, corrinoid complexes with metals other than cobalt, the redox chemistry of the cobalt corrinoids and their chemical redox reactions, and their photochemistry are discussed. Their role as catalysts in non-biological reactions and aspects of their organometallic chemistry are briefly mentioned. Particular mention is made of the role that computational methods - and especially DFT calculations - have played in developing our understanding of the inorganic chemistry of these compounds. A brief overview of the biological chemistry of the B12-dependent enzymes is also given for the reader's convenience.
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Affiliation(s)
- Helder M Marques
- Molecular Sciences Institute, School of Chemistry, University of the Witwatersrand, Johannesburg 2050, South Africa.
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2
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Michalski R, Smulik-Izydorczyk R, Pięta J, Rola M, Artelska A, Pierzchała K, Zielonka J, Kalyanaraman B, Sikora AB. The Chemistry of HNO: Mechanisms and Reaction Kinetics. Front Chem 2022; 10:930657. [PMID: 35864868 PMCID: PMC9294461 DOI: 10.3389/fchem.2022.930657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Accepted: 06/06/2022] [Indexed: 11/23/2022] Open
Abstract
Azanone (HNO, also known as nitroxyl) is the protonated form of the product of one-electron reduction of nitric oxide (•NO), and an elusive electrophilic reactive nitrogen species of increasing pharmacological significance. Over the past 20 years, the interest in the biological chemistry of HNO has increased significantly due to the numerous beneficial pharmacological effects of its donors. Increased availability of various HNO donors was accompanied by great progress in the understanding of HNO chemistry and chemical biology. This review is focused on the chemistry of HNO, with emphasis on reaction kinetics and mechanisms in aqueous solutions.
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Affiliation(s)
- Radosław Michalski
- Institute of Applied Radiation Chemistry, Lodz University of Technology, Lodz, Poland
| | | | - Jakub Pięta
- Institute of Applied Radiation Chemistry, Lodz University of Technology, Lodz, Poland
| | - Monika Rola
- Institute of Applied Radiation Chemistry, Lodz University of Technology, Lodz, Poland
| | - Angelika Artelska
- Institute of Applied Radiation Chemistry, Lodz University of Technology, Lodz, Poland
| | - Karolina Pierzchała
- Institute of Applied Radiation Chemistry, Lodz University of Technology, Lodz, Poland
| | - Jacek Zielonka
- Department of Biophysics, Medical College of Wisconsin, Milwaukee, WI, United States
| | | | - Adam Bartłomiej Sikora
- Institute of Applied Radiation Chemistry, Lodz University of Technology, Lodz, Poland
- *Correspondence: Adam Bartłomiej Sikora,
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3
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Polaczek J, Subedi H, Orzeł Ł, Lisboa LS, Cink RB, Stochel G, Brasch NE, van Eldik R. Mechanistic Studies on the Reaction between Aquacobalamin and the HNO Donor Piloty's Acid over a Wide pH Range in Aqueous Solution. Inorg Chem 2021; 60:2964-2975. [PMID: 33513014 DOI: 10.1021/acs.inorgchem.0c02968] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Detailed kinetic and mechanistic studies have been carried out on the reaction between aquacobalamin/hydroxocobalamin (CblOH2+/CblOH) and nitroxyl (HNO) generated by Piloty's acid (PA, N-hydroxybenzenesulfonamide) over a wide pH range (3.5-13). The resulting data showed that in a basic solution HNO can react with hydroxocobalamin to form nitrosylcobalamin despite the inert nature of CblOH. It was shown that at low PA concentrations the rate-determining step is the decomposition of PhSO2NHO- to release HNO, whereas the reaction between CblOH and HNO becomes the rate-determining step at high PA concentrations. Data from kinetic studies on the reaction of CblOH with an excess of HNO enabled us to experimentally determine the pKa(HNO) value from initial rate data as a function of pH, giving pKa(HNO) = 11.47 ± 0.04. An especially interesting observation was made in the neutral pH range, where PA is stable and does not produce HNO. Under such conditions, rapid formation of CblNO was observed in the studied system. The obtained data suggest that CblOH2+ reacts directly with PA to form a Piloty's acid-bound cobalamin intermediate, which deprotonates rapidly at neutral pH followed by rate-determining S-N bond cleavage to give CblNO and release PhSO2-.
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Affiliation(s)
- Justyna Polaczek
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Krakow, Poland
| | - Harishchandra Subedi
- Division of Health and Life Sciences, Piedmont Virginia Community College, 501 College Drive, Charlottesville, Virginia 22902-7589, United States
| | - Łukasz Orzeł
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Krakow, Poland
| | - Lynn S Lisboa
- School of Science, Auckland University of Technology, Auckland 1142, New Zealand
| | - Ruth B Cink
- School of Science, Auckland University of Technology, Auckland 1142, New Zealand.,The Dodd-Walls Centre for Quantum and Photonic Technologies, Dunedin 9054, New Zealand
| | - Grażyna Stochel
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Krakow, Poland
| | - Nicola E Brasch
- School of Science, Auckland University of Technology, Auckland 1142, New Zealand.,The Dodd-Walls Centre for Quantum and Photonic Technologies, Dunedin 9054, New Zealand.,The Maurice Wilkins Centre for Molecular Biodiscovery, Auckland 1142, New Zealand
| | - Rudi van Eldik
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Krakow, Poland.,Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Egerlandstrasse 1, 91058 Erlangen, Germany.,Faculty of Chemistry, Nicolaus Copernicus University in Torun, 87-100 Torun, Poland
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4
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Hubbard CD, Chatterjee D, Oszajca M, Polaczek J, Impert O, Chrzanowska M, Katafias A, Puchta R, van Eldik R. Inorganic reaction mechanisms. A personal journey. Dalton Trans 2020; 49:4599-4659. [PMID: 32162632 DOI: 10.1039/c9dt04620h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
This review covers highlights of the work performed in the van Eldik group on inorganic reaction mechanisms over the past two decades in the form of a personal journey. Topics that are covered include, from NO to HNO chemistry, peroxide activation in model porphyrin and enzymatic systems, the wonder-world of RuIII(edta) chemistry, redox chemistry of Ru(iii) complexes, Ru(ii) polypyridyl complexes and their application, relevant physicochemical properties and reaction mechanisms in ionic liquids, and mechanistic insight from computational chemistry. In each of these sections, typical examples of mechanistic studies are presented in reference to related work reported in the literature.
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Affiliation(s)
- Colin D Hubbard
- Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Egerlandstr. 1, 91058 Erlangen, Germany.
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5
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Dereven'kov IA, Hannibal L, Makarov SV, Molodtsov PA. Catalytic effect of riboflavin on electron transfer from NADH to aquacobalamin. J Biol Inorg Chem 2019; 25:125-133. [PMID: 31773269 DOI: 10.1007/s00775-019-01745-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2019] [Accepted: 11/21/2019] [Indexed: 11/26/2022]
Abstract
Reduction of cobalamin by non-dedicated cellular reductases has been reported in earlier work, however, the sources of reducing power and the mechanisms are unknown. This study reports results of kinetic and mechanistic investigation of the reaction between aquacobalamin, H2OCbl, and reduced β-nicotinamide adenine dinucleotide, NADH. This interaction leads to the formation of one-electron reduced cobalamin, cob(II)alamin, and proceeds via water substitution on aquacobalamin by NADH and further decomposition of NADH-Co(III) complex to cob(II)alamin and NADH·+. Riboflavin catalyzes the reduction of aquacobalamin by NADH both in free form and with aquacobalamin bound to the cobalamin processing enzyme CblC. The rate-determining step of this catalytic reaction is the interaction between riboflavin and NADH to produce a charge transfer complex that reacts with aquacobalamin. Aquacobalamin quenches the fluorescence of NADH and riboflavin predominantly via a static mechanism.
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Affiliation(s)
- Ilia A Dereven'kov
- Department of Food Chemistry, Ivanovo State University of Chemistry and Technology, Sheremetevskiy Str. 7, 153000, Ivanovo, Russian Federation.
| | - Luciana Hannibal
- Laboratory of Clinical Biochemistry and Metabolism, Department of General Pediatrics, Adolescent Medicine and Neonatology, Faculty of Medicine, Medical Center, University of Freiburg, 79106, Freiburg, Germany
| | - Sergei V Makarov
- Department of Food Chemistry, Ivanovo State University of Chemistry and Technology, Sheremetevskiy Str. 7, 153000, Ivanovo, Russian Federation
| | - Pavel A Molodtsov
- Department of Food Chemistry, Ivanovo State University of Chemistry and Technology, Sheremetevskiy Str. 7, 153000, Ivanovo, Russian Federation
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6
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Ren M, Deng B, Zhou K, Wang JY, Kong X, Lin W. A targetable fluorescent probe for imaging exogenous and intracellularly formed nitroxyl in mitochondria in living cells. J Mater Chem B 2017; 5:1954-1961. [DOI: 10.1039/c6tb03388a] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We have developed a new mitochondrial-targeted turn-on fluorescent HNO probe (Mito-HNO). Fluorescence imaging shows that Mito-HNO is suitable for ratiometric visualization of HNO within mitochondria in living cells.
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Affiliation(s)
- Mingguang Ren
- Institute of Fluorescent Probes for Biological Imaging
- School of Materials Science and Engineering
- School of Chemistry and Chemical Engineering
- University of Jinan
- Jinan
| | - Beibei Deng
- Institute of Fluorescent Probes for Biological Imaging
- School of Materials Science and Engineering
- School of Chemistry and Chemical Engineering
- University of Jinan
- Jinan
| | - Kai Zhou
- Institute of Fluorescent Probes for Biological Imaging
- School of Materials Science and Engineering
- School of Chemistry and Chemical Engineering
- University of Jinan
- Jinan
| | - Jian-Yong Wang
- Institute of Fluorescent Probes for Biological Imaging
- School of Materials Science and Engineering
- School of Chemistry and Chemical Engineering
- University of Jinan
- Jinan
| | - Xiuqi Kong
- Institute of Fluorescent Probes for Biological Imaging
- School of Materials Science and Engineering
- School of Chemistry and Chemical Engineering
- University of Jinan
- Jinan
| | - Weiying Lin
- Institute of Fluorescent Probes for Biological Imaging
- School of Materials Science and Engineering
- School of Chemistry and Chemical Engineering
- University of Jinan
- Jinan
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7
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Zhou Y, Cink RB, Dassanayake RS, Seed AJ, Brasch NE, Sampson P. Rapid Photoactivated Generation of Nitroxyl (HNO) under Neutral pH Conditions. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201605160] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Yang Zhou
- Department of Chemistry and Biochemistry; Kent State University (KSU); Kent OH 44240 USA
| | - Ruth B. Cink
- School of Applied Sciences; Auckland University of Technology (AUT); Private Bag 92006 Auckland 1142 New Zealand
| | - Rohan S. Dassanayake
- Department of Chemistry and Biochemistry; Kent State University (KSU); Kent OH 44240 USA
| | - Alexander J. Seed
- Department of Chemistry and Biochemistry; Kent State University (KSU); Kent OH 44240 USA
| | - Nicola E. Brasch
- School of Applied Sciences; Auckland University of Technology (AUT); Private Bag 92006 Auckland 1142 New Zealand
| | - Paul Sampson
- Department of Chemistry and Biochemistry; Kent State University (KSU); Kent OH 44240 USA
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8
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Zhou Y, Cink RB, Dassanayake RS, Seed AJ, Brasch NE, Sampson P. Rapid Photoactivated Generation of Nitroxyl (HNO) under Neutral pH Conditions. Angew Chem Int Ed Engl 2016; 55:13229-13232. [DOI: 10.1002/anie.201605160] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2016] [Revised: 08/03/2016] [Indexed: 01/17/2023]
Affiliation(s)
- Yang Zhou
- Department of Chemistry and Biochemistry; Kent State University (KSU); Kent OH 44240 USA
| | - Ruth B. Cink
- School of Applied Sciences; Auckland University of Technology (AUT); Private Bag 92006 Auckland 1142 New Zealand
| | - Rohan S. Dassanayake
- Department of Chemistry and Biochemistry; Kent State University (KSU); Kent OH 44240 USA
| | - Alexander J. Seed
- Department of Chemistry and Biochemistry; Kent State University (KSU); Kent OH 44240 USA
| | - Nicola E. Brasch
- School of Applied Sciences; Auckland University of Technology (AUT); Private Bag 92006 Auckland 1142 New Zealand
| | - Paul Sampson
- Department of Chemistry and Biochemistry; Kent State University (KSU); Kent OH 44240 USA
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9
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Walter MR, Dzul SP, Rodrigues AV, Stemmler TL, Telser J, Conradie J, Ghosh A, Harrop TC. Synthesis of CoII–NO– Complexes and Their Reactivity as a Source of Nitroxyl. J Am Chem Soc 2016; 138:12459-71. [DOI: 10.1021/jacs.6b05896] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Melody R. Walter
- Department
of Chemistry and Center for Metalloenzyme Studies, The University of Georgia, 140 Cedar Street, Athens, Georgia 30602, United States
| | - Stephen P. Dzul
- Departments
of Pharmaceutical Sciences, Biochemistry, and Molecular Biology, Wayne State University, Detroit, Michigan 48201, United States
| | - Andria V. Rodrigues
- Departments
of Pharmaceutical Sciences, Biochemistry, and Molecular Biology, Wayne State University, Detroit, Michigan 48201, United States
| | - Timothy L. Stemmler
- Departments
of Pharmaceutical Sciences, Biochemistry, and Molecular Biology, Wayne State University, Detroit, Michigan 48201, United States
| | - Joshua Telser
- Department
of Biological, Chemical, and Physical Sciences, Roosevelt University, 430 South Michigan Avenue, Chicago, Illinois 60605, United States
| | - Jeanet Conradie
- Department
of Chemistry, University of the Free State, 9300 Bloemfontein, Republic of South Africa
| | - Abhik Ghosh
- Department
of Chemistry and Center for Theoretical and
Computational Chemistry, University of Tromsø, N-9037 Tromsø, Norway
| | - Todd C. Harrop
- Department
of Chemistry and Center for Metalloenzyme Studies, The University of Georgia, 140 Cedar Street, Athens, Georgia 30602, United States
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10
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Miao Z, King SB. Recent advances in the chemical biology of nitroxyl (HNO) detection and generation. Nitric Oxide 2016; 57:1-14. [PMID: 27108951 PMCID: PMC4910183 DOI: 10.1016/j.niox.2016.04.006] [Citation(s) in RCA: 58] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2016] [Accepted: 04/18/2016] [Indexed: 01/01/2023]
Abstract
Nitroxyl or azanone (HNO) represents the redox-related (one electron reduced and protonated) relative of the well-known biological signaling molecule nitric oxide (NO). Despite the close structural similarity to NO, defined biological roles and endogenous formation of HNO remain unclear due to the high reactivity of HNO with itself, soft nucleophiles and transition metals. While significant work has been accomplished in terms of the physiology, biology and chemistry of HNO, important and clarifying work regarding HNO detection and formation has occurred within the last 10 years. This review summarizes advances in the areas of HNO detection and donation and their application to normal and pathological biology. Such chemical biological tools allow a deeper understanding of biological HNO formation and the role that HNO plays in a variety of physiological systems.
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Affiliation(s)
- Zhengrui Miao
- Department of Chemistry, Wake Forest University, Winston-Salem, NC 27109, USA
| | - S Bruce King
- Department of Chemistry, Wake Forest University, Winston-Salem, NC 27109, USA.
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11
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12
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Subedi H, Brasch NE. Mechanistic studies of the reactions of the reduced vitamin B12 derivatives with the HNO donor Piloty's acid: further evidence for oxidation of cob(I)alamin by (H)NO. Dalton Trans 2016; 45:352-60. [PMID: 26618754 DOI: 10.1039/c5dt03459k] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
There is accumulating evidence for the existence of HNO in biological systems. Compared with NO (˙NO), much less is known about the chemical and biochemical reactivity of HNO. Kinetic and mechanistic studies have been carried out on the reaction between the vitamin B12-derived radical complex cob(II)alamin (Cbl(II)˙, Cbl(II)) with the widely used HNO donor Piloty's acid (PA). A stoichiometry of 1 : 2 Cbl(II) : PA was obtained and PA decomposition to HNO and benzenesulfinate (C6H5SO2(-)) is the rate-determining step. No evidence was found for nitrite (Griess assay), ammonia (Nessler's test) or NH2OH (indooxine test) in the product solution, and it is likely that HNO is instead reduced to N2. A mechanism is proposed in which reduction of Cbl(II) by (H)NO results in formation of cob(I)alamin (Cbl(I)(-)) and ˙NO. The Cbl(I)(-) intermediate is subsequently oxidized back to Cbl(II) by a second (H)NO molecule, and Cbl(II) reacts rapidly with ˙NO to form nitroxylcobalamin (NOCbl). Separate studies on the reaction between Cbl(I)(-) and PA shows that this system involves an additional step in which Cbl(I)(-) is first oxidized by (H)NO to Cbl(II), which reacts further with (H)NO to form NOCbl, with an overall stoichiometry of 1 : 3 Cbl(I)(-) : PA. Experiments in the presence of nitrite for both systems support the involvement of a Cbl(I)(-) intermediate in the Cbl(II)/PA reaction. These systems provide the second example of oxidation of cob(I)alamin by (H)NO.
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Affiliation(s)
- Harishchandra Subedi
- Department of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, USA and Division of Science, Mathematics, and Physical Education, Western Nebraska Community College, Scottsbluff, Nebraska 69361, USA
| | - Nicola E Brasch
- School of Applied Sciences, Auckland University of Technology, Private Bag 92006, Auckland 1142, New Zealand.
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