1
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Balcı F, Simen P. Neurocomputational Models of Interval Timing: Seeing the Forest for the Trees. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2024; 1455:51-78. [PMID: 38918346 DOI: 10.1007/978-3-031-60183-5_4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/27/2024]
Abstract
Extracting temporal regularities and relations from experience/observation is critical for organisms' adaptiveness (communication, foraging, predation, prediction) in their ecological niches. Therefore, it is not surprising that the internal clock that enables the perception of seconds-to-minutes-long intervals (interval timing) is evolutionarily well-preserved across many species of animals. This comparative claim is primarily supported by the fact that the timing behavior of many vertebrates exhibits common statistical signatures (e.g., on-average accuracy, scalar variability, positive skew). These ubiquitous statistical features of timing behaviors serve as empirical benchmarks for modelers in their efforts to unravel the processing dynamics of the internal clock (namely answering how internal clock "ticks"). In this chapter, we introduce prominent (neuro)computational approaches to modeling interval timing at a level that can be understood by general audience. These models include Treisman's pacemaker accumulator model, the information processing variant of scalar expectancy theory, the striatal beat frequency model, behavioral expectancy theory, the learning to time model, the time-adaptive opponent Poisson drift-diffusion model, time cell models, and neural trajectory models. Crucially, we discuss these models within an overarching conceptual framework that categorizes different models as threshold vs. clock-adaptive models and as dedicated clock/ramping vs. emergent time/population code models.
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Affiliation(s)
- Fuat Balcı
- Department of Biological Sciences, University of Manitoba, Winnipeg, MB, Canada.
| | - Patrick Simen
- Department of Neuroscience, Oberlin College, Oberlin, OH, USA
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2
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Chinoy RB, Tanwar A, Buonomano DV. A Recurrent Neural Network Model Accounts for Both Timing and Working Memory Components of an Interval Discrimination Task. TIMING & TIME PERCEPTION 2022. [DOI: 10.1163/22134468-bja10058] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Abstract
Interval discrimination is of fundamental importance to many forms of sensory processing, including speech and music. Standard interval discrimination tasks require comparing two intervals separated in time, and thus include both working memory (WM) and timing components. Models of interval discrimination invoke separate circuits for the timing and WM components. Here we examine if, in principle, the same recurrent neural network can implement both. Using human psychophysics, we first explored the role of the WM component by varying the interstimulus delay. Consistent with previous studies, discrimination was significantly worse for a 250 ms delay, compared to 750 and 1500 ms delays, suggesting that the first interval is stably stored in WM for longer delays. We next successfully trained a recurrent neural network (RNN) on the task, demonstrating that the same network can implement both the timing and WM components. Many units in the RNN were tuned to specific intervals during the sensory epoch, and others encoded the first interval during the delay period. Overall, the encoding strategy was consistent with the notion of mixed selectivity. Units generally encoded more interval information during the sensory epoch than in the delay period, reflecting categorical encoding of short versus long in WM, rather than encoding of the specific interval. Our results demonstrate that, in contrast to standard models of interval discrimination that invoke a separate memory module, the same network can, in principle, solve the timing, WM, and comparison components of an interval discrimination task.
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Affiliation(s)
- Rehan B. Chinoy
- Departments of Neurobiology and Psychology, Brain Research Institute, and Integrative Center for Learning and Memory, University of California, Los Angeles, CA 90095–1763, USA
| | - Ashita Tanwar
- Departments of Neurobiology and Psychology, Brain Research Institute, and Integrative Center for Learning and Memory, University of California, Los Angeles, CA 90095–1763, USA
| | - Dean V. Buonomano
- Departments of Neurobiology and Psychology, Brain Research Institute, and Integrative Center for Learning and Memory, University of California, Los Angeles, CA 90095–1763, USA
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3
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Yoo HB, Umbach G, Lega B. Episodic boundary cells in human medial temporal lobe during the free recall task. Hippocampus 2022; 32:481-487. [PMID: 35579307 PMCID: PMC10682840 DOI: 10.1002/hipo.23421] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Revised: 03/31/2022] [Accepted: 04/25/2022] [Indexed: 11/11/2022]
Abstract
A necessary condition for forming episodic memories is the construction of specific episodes demarcated from other episodes in space and time. Evidence from studies of episodic memory formation using rodent models suggest that the medial temporal lobe (MTL) supports the representation of boundary information. Building on recent work using human microelectrode recordings as well, we hypothesized of human MTL neurons with firing rates sensitive to episodic boundary information. We identified 27 episodic boundary neurons out of 736 single neurons recorded across 27 subjects. Firing of these neurons increased at the beginning and end of mnemonically relevant episodes in the free recall task. We distinguish episodic boundary neurons from a population of ramping neurons (n = 58), which are time-sensitive neurons whose activity provides complementary information during episodic representation. Episodic boundary neurons exhibited a U-shaped activity pattern demonstrating increased activity after both beginning and end boundaries of encoding and retrieval epochs. We also describe evidence that the firing of boundary neurons within episodic boundaries is organized by hippocampal theta oscillations, using spike-field coherence metrics.
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Affiliation(s)
- Hye Bin Yoo
- Department of Neurological Surgery, University of Texas Southwestern, Dallas, Texas, USA
| | - Gray Umbach
- Department of Neurological Surgery, University of Texas Southwestern, Dallas, Texas, USA
| | - Bradley Lega
- Department of Neurological Surgery, University of Texas Southwestern, Dallas, Texas, USA
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4
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Liu Y, Levy S, Mau W, Geva N, Rubin A, Ziv Y, Hasselmo M, Howard M. Consistent population activity on the scale of minutes in the mouse hippocampus. Hippocampus 2022; 32:359-372. [PMID: 35225408 PMCID: PMC10085730 DOI: 10.1002/hipo.23409] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Revised: 01/05/2022] [Accepted: 01/31/2022] [Indexed: 11/09/2022]
Abstract
Neurons in the hippocampus fire in consistent sequence over the timescale of seconds during the delay period of some memory experiments. For longer timescales, the firing of hippocampal neurons also changes slowly over minutes within experimental sessions. It was thought that these slow dynamics are caused by stochastic drift or a continuous change in the representation of the episode, rather than consistent sequences unfolding over minutes. This paper studies the consistency of contextual drift in three chronic calcium imaging recordings from the hippocampus CA1 region in mice. Computational measures of consistency show reliable sequences within experimental trials at the scale of seconds as one would expect from time cells or place cells during the trial, as well as across experimental trials on the scale of minutes within a recording session. Consistent sequences in the hippocampus are observed over a wide range of time scales, from seconds to minutes. The hippocampal activity could reflect a scale-invariant spatiotemporal context as suggested by theories of memory from cognitive psychology.
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Affiliation(s)
- Yue Liu
- Department of Physics, Boston University, Boston, Massachusetts, USA.,Center for Systems Neuroscience, Boston University, Boston, Massachusetts, USA.,Center for Memory and Brain, Boston University, Boston, Massachusetts, USA
| | - Samuel Levy
- Center for Systems Neuroscience, Boston University, Boston, Massachusetts, USA.,Center for Memory and Brain, Boston University, Boston, Massachusetts, USA.,Department of Psychological and Brain Sciences, Boston University, Boston, Massachusetts, USA
| | - William Mau
- Center for Systems Neuroscience, Boston University, Boston, Massachusetts, USA.,Center for Memory and Brain, Boston University, Boston, Massachusetts, USA.,Department of Psychological and Brain Sciences, Boston University, Boston, Massachusetts, USA
| | - Nitzan Geva
- Department of Neurobiology, Weizmann Institute of Science, Rehovot, Israel
| | - Alon Rubin
- Department of Neurobiology, Weizmann Institute of Science, Rehovot, Israel
| | - Yaniv Ziv
- Department of Neurobiology, Weizmann Institute of Science, Rehovot, Israel
| | - Michael Hasselmo
- Center for Systems Neuroscience, Boston University, Boston, Massachusetts, USA.,Center for Memory and Brain, Boston University, Boston, Massachusetts, USA.,Department of Psychological and Brain Sciences, Boston University, Boston, Massachusetts, USA
| | - Marc Howard
- Department of Physics, Boston University, Boston, Massachusetts, USA.,Center for Systems Neuroscience, Boston University, Boston, Massachusetts, USA.,Center for Memory and Brain, Boston University, Boston, Massachusetts, USA.,Department of Psychological and Brain Sciences, Boston University, Boston, Massachusetts, USA
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5
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Hasselmo ME. Introduction to part two of the special issue on computational models of hippocampus and related structures. Hippocampus 2020; 30:1328-1331. [PMID: 33185288 DOI: 10.1002/hipo.23279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Extensive computational modeling has focused on the hippocampal formation and related cortical structures. This introduction describes the topics addressed by individual articles in part two of this special issue of the journal Hippocampus on the topic of computational models of the hippocampus and related structures.
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Affiliation(s)
- Michael E Hasselmo
- Center for Systems Neuroscience, Boston University, Boston, Massachusetts, USA
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6
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Cruzado NA, Tiganj Z, Brincat SL, Miller EK, Howard MW. Conjunctive representation of what and when in monkey hippocampus and lateral prefrontal cortex during an associative memory task. Hippocampus 2020; 30:1332-1346. [DOI: 10.1002/hipo.23282] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2019] [Revised: 10/20/2020] [Accepted: 10/26/2020] [Indexed: 12/13/2022]
Affiliation(s)
- Nathanael A. Cruzado
- Department of Psychological and Brain Sciences Boston University Boston Massachusetts USA
| | - Zoran Tiganj
- Department of Psychological and Brain Sciences Boston University Boston Massachusetts USA
| | - Scott L. Brincat
- Picower Institute of Learning and Memory, MIT Cambridge Massachusetts USA
- Department of Brain and Cognitive Sciences MIT Cambridge Massachusetts USA
| | - Earl K. Miller
- Picower Institute of Learning and Memory, MIT Cambridge Massachusetts USA
- Department of Brain and Cognitive Sciences MIT Cambridge Massachusetts USA
| | - Marc W. Howard
- Department of Psychological and Brain Sciences Boston University Boston Massachusetts USA
- Center for Memory and Brain, Boston University Boston Massachusetts USA
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7
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Potential and efficiency of statistical learning closely intertwined with individuals' executive functions: a mathematical modeling study. Sci Rep 2020; 10:18843. [PMID: 33139784 PMCID: PMC7606401 DOI: 10.1038/s41598-020-75157-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2020] [Accepted: 10/12/2020] [Indexed: 11/08/2022] Open
Abstract
Statistical learning (SL) is essential in enabling humans to extract probabilistic regularities from the world. The ability to accomplish ultimate learning performance with training (i.e., the potential of learning) has been known to be dissociated with performance improvement per amount of learning time (i.e., the efficiency of learning). Here, we quantified the potential and efficiency of SL separately through mathematical modeling and scrutinized how they were affected by various executive functions. Our results showed that a high potential of SL was associated with poor inhibition and good visuo-spatial working memory, whereas high efficiency of SL was closely related to good inhibition and good set-shifting. We unveiled the distinct characteristics of SL in relation to potential and efficiency and their interaction with executive functions.
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8
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Bright IM, Meister MLR, Cruzado NA, Tiganj Z, Buffalo EA, Howard MW. A temporal record of the past with a spectrum of time constants in the monkey entorhinal cortex. Proc Natl Acad Sci U S A 2020; 117:20274-20283. [PMID: 32747574 PMCID: PMC7443936 DOI: 10.1073/pnas.1917197117] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
Episodic memory is believed to be intimately related to our experience of the passage of time. Indeed, neurons in the hippocampus and other brain regions critical to episodic memory code for the passage of time at a range of timescales. The origin of this temporal signal, however, remains unclear. Here, we examined temporal responses in the entorhinal cortex of macaque monkeys as they viewed complex images. Many neurons in the entorhinal cortex were responsive to image onset, showing large deviations from baseline firing shortly after image onset but relaxing back to baseline at different rates. This range of relaxation rates allowed for the time since image onset to be decoded on the scale of seconds. Further, these neurons carried information about image content, suggesting that neurons in the entorhinal cortex carry information about not only when an event took place but also, the identity of that event. Taken together, these findings suggest that the primate entorhinal cortex uses a spectrum of time constants to construct a temporal record of the past in support of episodic memory.
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Affiliation(s)
- Ian M Bright
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215
| | - Miriam L R Meister
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195
- Washington National Primate Research Center, Seattle, WA 98195
- Department of Physiology and Biophysics, University of Washington School of Medicine, Seattle, WA 98195
| | - Nathanael A Cruzado
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215
| | - Zoran Tiganj
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215
- Department of Computer Science, Indiana University, Bloomington, IN 47405
| | - Elizabeth A Buffalo
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195
- Washington National Primate Research Center, Seattle, WA 98195
- Department of Physiology and Biophysics, University of Washington School of Medicine, Seattle, WA 98195
| | - Marc W Howard
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215;
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9
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Issa JB, Tocker G, Hasselmo ME, Heys JG, Dombeck DA. Navigating Through Time: A Spatial Navigation Perspective on How the Brain May Encode Time. Annu Rev Neurosci 2020; 43:73-93. [PMID: 31961765 PMCID: PMC7351603 DOI: 10.1146/annurev-neuro-101419-011117] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Interval timing, which operates on timescales of seconds to minutes, is distributed across multiple brain regions and may use distinct circuit mechanisms as compared to millisecond timing and circadian rhythms. However, its study has proven difficult, as timing on this scale is deeply entangled with other behaviors. Several circuit and cellular mechanisms could generate sequential or ramping activity patterns that carry timing information. Here we propose that a productive approach is to draw parallels between interval timing and spatial navigation, where direct analogies can be made between the variables of interest and the mathematical operations necessitated. Along with designing experiments that isolate or disambiguate timing behavior from other variables, new techniques will facilitate studies that directly address the neural mechanisms that are responsible for interval timing.
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Affiliation(s)
- John B Issa
- Department of Neurobiology, Northwestern University, Evanston, Illinois 60208, USA;
| | - Gilad Tocker
- Department of Neurobiology, Northwestern University, Evanston, Illinois 60208, USA;
| | - Michael E Hasselmo
- Center for Systems Neuroscience, Boston University, Boston, Massachusetts 02215, USA
| | - James G Heys
- Department of Neurobiology and Anatomy, University of Utah, Salt Lake City, Utah 84112, USA
| | - Daniel A Dombeck
- Department of Neurobiology, Northwestern University, Evanston, Illinois 60208, USA;
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10
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Liu Y, Howard MW. Generation of Scale-Invariant Sequential Activity in Linear Recurrent Networks. Neural Comput 2020; 32:1379-1407. [PMID: 32433902 DOI: 10.1162/neco_a_01288] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Sequential neural activity has been observed in many parts of the brain and has been proposed as a neural mechanism for memory. The natural world expresses temporal relationships at a wide range of scales. Because we cannot know the relevant scales a priori, it is desirable that memory, and thus the generated sequences, is scale invariant. Although recurrent neural network models have been proposed as a mechanism for generating sequences, the requirements for scale-invariant sequences are not known. This letter reports the constraints that enable a linear recurrent neural network model to generate scale-invariant sequential activity. A straightforward eigendecomposition analysis results in two independent conditions that are required for scale invariance for connectivity matrices with real, distinct eigenvalues. First, the eigenvalues of the network must be geometrically spaced. Second, the eigenvectors must be related to one another via translation. These constraints are easily generalizable for matrices that have complex and distinct eigenvalues. Analogous albeit less compact constraints hold for matrices with degenerate eigenvalues. These constraints, along with considerations on initial conditions, provide a general recipe to build linear recurrent neural networks that support scale-invariant sequential activity.
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Affiliation(s)
- Yue Liu
- Department of Physics and Center for Systems Neuroscience, Boston University, Boston, MA 02215, U.S.A.
| | - Marc W Howard
- Department of Physics, Center for Systems Neuroscience, and Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215, U.S.A.
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11
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Hasselmo ME, Alexander AS, Dannenberg H, Newman EL. Overview of computational models of hippocampus and related structures: Introduction to the special issue. Hippocampus 2020; 30:295-301. [PMID: 32119171 DOI: 10.1002/hipo.23201] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Extensive computational modeling has focused on the hippocampal formation and associated cortical structures. This overview describes some of the factors that have motivated the strong focus on these structures, including major experimental findings and their impact on computational models. This overview provides a framework for describing the topics addressed by individual articles in this special issue of the journal Hippocampus.
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Affiliation(s)
- Michael E Hasselmo
- Center for Systems Neuroscience, Boston University, Boston, Massachusetts
| | - Andrew S Alexander
- Center for Systems Neuroscience, Boston University, Boston, Massachusetts
| | - Holger Dannenberg
- Center for Systems Neuroscience, Boston University, Boston, Massachusetts
| | - Ehren L Newman
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, Indiana
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12
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Dannenberg H, Alexander AS, Robinson JC, Hasselmo ME. The Role of Hierarchical Dynamical Functions in Coding for Episodic Memory and Cognition. J Cogn Neurosci 2019; 31:1271-1289. [PMID: 31251890 DOI: 10.1162/jocn_a_01439] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
Behavioral research in human verbal memory function led to the initial definition of episodic memory and semantic memory. A complete model of the neural mechanisms of episodic memory must include the capacity to encode and mentally reconstruct everything that humans can recall from their experience. This article proposes new model features necessary to address the complexity of episodic memory encoding and recall in the context of broader cognition and the functional properties of neurons that could contribute to this broader scope of memory. Many episodic memory models represent individual snapshots of the world with a sequence of vectors, but a full model must represent complex functions encoding and retrieving the relations between multiple stimulus features across space and time on multiple hierarchical scales. Episodic memory involves not only the space and time of an agent experiencing events within an episode but also features shown in neurophysiological data such as coding of speed, direction, boundaries, and objects. Episodic memory includes not only a spatio-temporal trajectory of a single agent but also segments of spatio-temporal trajectories for other agents and objects encountered in the environment consistent with data on encoding the position and angle of sensory features of objects and boundaries. We will discuss potential interactions of episodic memory circuits in the hippocampus and entorhinal cortex with distributed neocortical circuits that must represent all features of human cognition.
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13
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Tiganj Z, Gershman SJ, Sederberg PB, Howard MW. Estimating Scale-Invariant Future in Continuous Time. Neural Comput 2019; 31:681-709. [PMID: 30764739 PMCID: PMC6959535 DOI: 10.1162/neco_a_01171] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Natural learners must compute an estimate of future outcomes that follow from a stimulus in continuous time. Widely used reinforcement learning algorithms discretize continuous time and estimate either transition functions from one step to the next (model-based algorithms) or a scalar value of exponentially discounted future reward using the Bellman equation (model-free algorithms). An important drawback of model-based algorithms is that computational cost grows linearly with the amount of time to be simulated. An important drawback of model-free algorithms is the need to select a timescale required for exponential discounting. We present a computational mechanism, developed based on work in psychology and neuroscience, for computing a scale-invariant timeline of future outcomes. This mechanism efficiently computes an estimate of inputs as a function of future time on a logarithmically compressed scale and can be used to generate a scale-invariant power-law-discounted estimate of expected future reward. The representation of future time retains information about what will happen when. The entire timeline can be constructed in a single parallel operation that generates concrete behavioral and neural predictions. This computational mechanism could be incorporated into future reinforcement learning algorithms.
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Affiliation(s)
- Zoran Tiganj
- Center for Memory and Brain, Department of Psychological and Brain Sciences, Boston, MA 02215, U.S.A.
| | - Samuel J Gershman
- Department of Psychology and Center for Brain Science, Harvard University, Cambridge, MA 02138, U.S.A.
| | - Per B Sederberg
- Department of Psychology, University of Virginia, Charlottesville, VA, 22904, U.S.A.
| | - Marc W Howard
- Center for Memory and Brain, Department of Psychological and Brain Sciences, Boston, MA 02215, U.S.A.
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14
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Liu Y, Tiganj Z, Hasselmo ME, Howard MW. A neural microcircuit model for a scalable scale-invariant representation of time. Hippocampus 2019; 29:260-274. [PMID: 30421473 PMCID: PMC7001882 DOI: 10.1002/hipo.22994] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2017] [Revised: 05/21/2018] [Accepted: 05/31/2018] [Indexed: 11/10/2022]
Abstract
Scale-invariant timing has been observed in a wide range of behavioral experiments. The firing properties of recently described time cells provide a possible neural substrate for scale-invariant behavior. Earlier neural circuit models do not produce scale-invariant neural sequences. In this article, we present a biologically detailed network model based on an earlier mathematical algorithm. The simulations incorporate exponentially decaying persistent firing maintained by the calcium-activated nonspecific (CAN) cationic current and a network structure given by the inverse Laplace transform to generate time cells with scale-invariant firing rates. This model provides the first biologically detailed neural circuit for generating scale-invariant time cells. The circuit that implements the inverse Laplace transform merely consists of off-center/on-surround receptive fields. Critically, rescaling temporal sequences can be accomplished simply via cortical gain control (changing the slope of the f-I curve).
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Affiliation(s)
- Yue Liu
- Department of Physics, Boston University, Boston, MA 02215
- Center for Memory and Brain, Boston University, Boston, MA 02215
- Center for Systems Neuroscience, Boston University, Boston, MA 02215
| | - Zoran Tiganj
- Center for Memory and Brain, Boston University, Boston, MA 02215
- Center for Systems Neuroscience, Boston University, Boston, MA 02215
| | - Michael E. Hasselmo
- Center for Memory and Brain, Boston University, Boston, MA 02215
- Center for Systems Neuroscience, Boston University, Boston, MA 02215
| | - Marc W. Howard
- Department of Physics, Boston University, Boston, MA 02215
- Center for Memory and Brain, Boston University, Boston, MA 02215
- Center for Systems Neuroscience, Boston University, Boston, MA 02215
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15
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Howard MW, Luzardo A, Tiganj Z. Evidence accumulation in a Laplace domain decision space. COMPUTATIONAL BRAIN & BEHAVIOR 2018; 1:237-251. [PMID: 31131363 PMCID: PMC6530931 DOI: 10.1007/s42113-018-0016-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
Evidence accumulation models of simple decision-making have long assumed that the brain estimates a scalar decision variable corresponding to the log-likelihood ratio of the two alternatives. Typical neural implementations of this algorithmic cognitive model assume that large numbers of neurons are each noisy exemplars of the scalar decision variable. Here we propose a neural implementation of the diffusion model in which many neurons construct and maintain the Laplace transform of the distance to each of the decision bounds. As in classic findings from brain regions including LIP, the firing rate of neurons coding for the Laplace transform of net accumulated evidence grows to a bound during random dot motion tasks. However, rather than noisy exemplars of a single mean value, this approach makes the novel prediction that firing rates grow to the bound exponentially; across neurons there should be a distribution of different rates. A second set of neurons records an approximate inversion of the Laplace transform; these neurons directly estimate net accumulated evidence. In analogy to time cells and place cells observed in the hippocampus and other brain regions, the neurons in this second set have receptive fields along a "decision axis." This finding is consistent with recent findings from rodent recordings. This theoretical approach places simple evidence accumulation models in the same mathematical language as recent proposals for representing time and space in cognitive models for memory.
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Affiliation(s)
- Marc W Howard
- Department of Psychological and Brain Sciences, Department of Physics, Boston University
| | - Andre Luzardo
- Department of Psychological and Brain Sciences, Department of Physics, Boston University
| | - Zoran Tiganj
- Department of Psychological and Brain Sciences, Department of Physics, Boston University
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16
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Singh I, Tiganj Z, Howard MW. Is working memory stored along a logarithmic timeline? Converging evidence from neuroscience, behavior and models. Neurobiol Learn Mem 2018; 153:104-110. [PMID: 29698768 PMCID: PMC6064661 DOI: 10.1016/j.nlm.2018.04.008] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2017] [Revised: 03/31/2018] [Accepted: 04/06/2018] [Indexed: 10/17/2022]
Abstract
A growing body of evidence suggests that short-term memory does not only store the identity of recently experienced stimuli, but also information about when they were presented. This representation of 'what' happened 'when' constitutes a neural timeline of recent past. Behavioral results suggest that people can sequentially access memories for the recent past, as if they were stored along a timeline to which attention is sequentially directed. In the short-term judgment of recency (JOR) task, the time to choose between two probe items depends on the recency of the more recent probe but not on the recency of the more remote probe. This pattern of results suggests a backward self-terminating search model. We review recent neural evidence from the macaque lateral prefrontal cortex (lPFC) (Tiganj, Cromer, Roy, Miller, & Howard, in press) and behavioral evidence from human JOR task (Singh & Howard, 2017) bearing on this question. Notably, both lines of evidence suggest that the timeline is logarithmically compressed as predicted by Weber-Fechner scaling. Taken together, these findings provide an integrative perspective on temporal organization and neural underpinnings of short-term memory.
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Affiliation(s)
- Inder Singh
- Department of Psychology, Northeastern University, United States
| | - Zoran Tiganj
- Department of Psychological and Brain Sciences, Boston University, United States
| | - Marc W Howard
- Department of Psychological and Brain Sciences, Boston University, United States.
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17
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Oprisan SA, Buhusi M, Buhusi CV. A Population-Based Model of the Temporal Memory in the Hippocampus. Front Neurosci 2018; 12:521. [PMID: 30131668 PMCID: PMC6090536 DOI: 10.3389/fnins.2018.00521] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2018] [Accepted: 07/11/2018] [Indexed: 11/13/2022] Open
Abstract
Spatial and temporal dimensions are fundamental for orientation, adaptation, and survival of organisms. Hippocampus has been identified as the main neuroanatomical structure involved both in space and time perception and their internal representation. Dorsal hippocampus lesions showed a leftward shift (toward shorter durations) in peak-interval procedures, whereas ventral lesions shifted the peak time toward longer durations. We previously explained hippocampus lesion experimental findings by assuming a topological map model of the hippocampus with shorter durations memorized ventrally and longer durations more dorsal. Here we suggested a possible connection between the abstract topological maps model of the hippocampus that stored reinforcement times in a spatially ordered memory register and the "time cells" of the hippocampus. In this new model, the time cells provide a uniformly distributed time basis that covers the entire to-be-learned temporal duration. We hypothesized that the topological map of the hippocampus stores the weights that reflect the contribution of each time cell to the average temporal field that determines the behavioral response. The temporal distance between the to-be-learned criterion time and the time of the peak activity of each time cell provides the error signal that determines the corresponding weight correction. Long-term potentiation/depression could enhance/weaken the weights associated to the time cells that peak closer/farther to the criterion time. A coincidence detector mechanism, possibly under the control of the dopaminergic system, could be involved in our suggested error minimization and learning algorithm.
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Affiliation(s)
- Sorinel A Oprisan
- Department of Physics and Astronomy, College of Charleston, Charleston, SC, United States
| | - Mona Buhusi
- Interdisciplinary Program in Neuroscience, Department of Psychology, Utah State University, Logan, UT, United States
| | - Catalin V Buhusi
- Interdisciplinary Program in Neuroscience, Department of Psychology, Utah State University, Logan, UT, United States
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Tiganj Z, Jung MW, Kim J, Howard MW. Sequential Firing Codes for Time in Rodent Medial Prefrontal Cortex. Cereb Cortex 2018; 27:5663-5671. [PMID: 29145670 DOI: 10.1093/cercor/bhw336] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2016] [Accepted: 10/10/2016] [Indexed: 11/14/2022] Open
Abstract
A subset of hippocampal neurons, known as "time cells" fire sequentially for circumscribed periods of time within a delay interval. We investigated whether medial prefrontal cortex (mPFC) also contains time cells and whether their qualitative properties differ from those in the hippocampus and striatum. We studied the firing correlates of neurons in the rodent mPFC during a temporal discrimination task. On each trial, the animals waited for a few seconds in the stem of a T-maze. A subpopulation of units fired in a sequence consistently across trials for a circumscribed period during the delay interval. These sequentially activated time cells showed temporal accuracy that decreased as time passed as measured by both the width of their firing fields and the number of cells that fired at a particular part of the interval. The firing dynamics of the time cells was significantly better explained with the elapse of time than with the animals' position and velocity. The findings observed here in the mPFC are consistent with those previously reported in the hippocampus and striatum, suggesting that the sequentially activated time cells are not specific to these areas, but are part of a common representational motif across regions.
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Affiliation(s)
- Zoran Tiganj
- Department of Psychological and Brain Sciences, Center for Memory and Brain, Boston University, Boston, MA USA
| | - Min Whan Jung
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science, Daejeon, Korea.,Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, Korea
| | - Jieun Kim
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science, Daejeon, Korea
| | - Marc W Howard
- Department of Psychological and Brain Sciences, Center for Memory and Brain, Boston University, Boston, MA USA
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19
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Tiganj Z, Cromer JA, Roy JE, Miller EK, Howard MW. Compressed Timeline of Recent Experience in Monkey Lateral Prefrontal Cortex. J Cogn Neurosci 2018; 30:935-950. [PMID: 29698121 PMCID: PMC7004225 DOI: 10.1162/jocn_a_01273] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Cognitive theories suggest that working memory maintains not only the identity of recently presented stimuli but also a sense of the elapsed time since the stimuli were presented. Previous studies of the neural underpinnings of working memory have focused on sustained firing, which can account for maintenance of the stimulus identity, but not for representation of the elapsed time. We analyzed single-unit recordings from the lateral prefrontal cortex of macaque monkeys during performance of a delayed match-to-category task. Each sample stimulus triggered a consistent sequence of neurons, with each neuron in the sequence firing during a circumscribed period. These sequences of neurons encoded both stimulus identity and elapsed time. The encoding of elapsed time became less precise as the sample stimulus receded into the past. These findings suggest that working memory includes a compressed timeline of what happened when, consistent with long-standing cognitive theories of human memory.
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Affiliation(s)
- Zoran Tiganj
- Center for Memory and Brain, Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215
| | - Jason A. Cromer
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139
| | - Jefferson E. Roy
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139
| | - Earl K. Miller
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139
| | - Marc W. Howard
- Center for Memory and Brain, Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215
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20
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Mau W, Sullivan DW, Kinsky NR, Hasselmo ME, Howard MW, Eichenbaum H. The Same Hippocampal CA1 Population Simultaneously Codes Temporal Information over Multiple Timescales. Curr Biol 2018; 28:1499-1508.e4. [PMID: 29706516 DOI: 10.1016/j.cub.2018.03.051] [Citation(s) in RCA: 104] [Impact Index Per Article: 17.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2018] [Revised: 03/16/2018] [Accepted: 03/22/2018] [Indexed: 11/18/2022]
Abstract
It has long been hypothesized that a primary function of the hippocampus is to discover and exploit temporal relationships between events. Previously, it has been reported that sequences of "time cells" in the hippocampus extend for tens of seconds. Other studies have shown that neuronal firing in the hippocampus fluctuates over hours and days. Both of these mechanisms could enable temporal encoding of events over very different timescales. However, thus far, these two classes of phenomena have never been observed simultaneously, which is necessary to ascribe broad-range temporal coding to the hippocampus. Using in vivo calcium imaging in unrestrained mice, we observed sequences of hippocampal neurons that bridged a 10 s delay. Similar sequences were observed over multiple days, but the set of neurons participating in those sequences changed gradually. Thus, the same population of neurons that encodes temporal information over seconds can also be used to distinguish periods of time over much longer timescales. These results unify two previously separate paradigms of temporal processing in the hippocampus that support episodic memory.
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Affiliation(s)
- William Mau
- Center for Memory and Brain, Boston University, Commonwealth Avenue, Boston, MA 02215, USA; Graduate Program for Neuroscience, Boston University, Commonwealth Avenue, Boston, MA 02215, USA.
| | - David W Sullivan
- Center for Memory and Brain, Boston University, Commonwealth Avenue, Boston, MA 02215, USA
| | - Nathaniel R Kinsky
- Center for Memory and Brain, Boston University, Commonwealth Avenue, Boston, MA 02215, USA; Graduate Program for Neuroscience, Boston University, Commonwealth Avenue, Boston, MA 02215, USA
| | - Michael E Hasselmo
- Center for Memory and Brain, Boston University, Commonwealth Avenue, Boston, MA 02215, USA
| | - Marc W Howard
- Center for Memory and Brain, Boston University, Commonwealth Avenue, Boston, MA 02215, USA
| | - Howard Eichenbaum
- Center for Memory and Brain, Boston University, Commonwealth Avenue, Boston, MA 02215, USA
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21
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Voelker AR, Eliasmith C. Improving Spiking Dynamical Networks: Accurate Delays, Higher-Order Synapses, and Time Cells. Neural Comput 2018; 30:569-609. [DOI: 10.1162/neco_a_01046] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Researchers building spiking neural networks face the challenge of improving the biological plausibility of their model networks while maintaining the ability to quantitatively characterize network behavior. In this work, we extend the theory behind the neural engineering framework (NEF), a method of building spiking dynamical networks, to permit the use of a broad class of synapse models while maintaining prescribed dynamics up to a given order. This theory improves our understanding of how low-level synaptic properties alter the accuracy of high-level computations in spiking dynamical networks. For completeness, we provide characterizations for both continuous-time (i.e., analog) and discrete-time (i.e., digital) simulations. We demonstrate the utility of these extensions by mapping an optimal delay line onto various spiking dynamical networks using higher-order models of the synapse. We show that these networks nonlinearly encode rolling windows of input history, using a scale invariant representation, with accuracy depending on the frequency content of the input signal. Finally, we reveal that these methods provide a novel explanation of time cell responses during a delay task, which have been observed throughout hippocampus, striatum, and cortex.
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Affiliation(s)
- Aaron R. Voelker
- Centre for Theoretical Neuroscience and David R. Cheriton School of Computer Science, University of Waterloo, Waterloo, ON N2L 3G1, Canada
| | - Chris Eliasmith
- Centre for Theoretical Neuroscience, University of Waterloo, Waterloo, ON N2L 3G1, Canada
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Howard MW. Memory as Perception of the Past: Compressed Time inMind and Brain. Trends Cogn Sci 2018; 22:124-136. [PMID: 29389352 PMCID: PMC5881576 DOI: 10.1016/j.tics.2017.11.004] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2017] [Revised: 11/07/2017] [Accepted: 11/16/2017] [Indexed: 01/27/2023]
Abstract
In the visual system retinal space is compressed such that acuity decreases further from the fovea. Different forms of memory may rely on a compressed representation of time, manifested as decreased accuracy for events that happened further in the past. Neurophysiologically, "time cells" show receptive fields in time. Analogous to the compression of visual space, time cells show less acuity for events further in the past. Behavioral evidence suggests memory can be accessed by scanning a compressed temporal representation, analogous to visual search. This suggests a common computational language for visual attention and memory retrieval. In this view, time functions like a scaffolding that organizes memories in much the same way that retinal space functions like a scaffolding for visual perception.
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Affiliation(s)
- Marc W Howard
- Center for Memory and Brain, Department of Psychologicaland Brain Sciences, Department of Physics, Boston University, Boston, MA, USA.
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23
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Abstract
Autonomous neural systems must efficiently process information in a wide range of novel environments which may have very different statistical properties. We consider the problem of how to optimally distribute receptors along a 1-dimensional continuum consistent with the following design principles. First, neural representations of the world should obey a neural uncertainty principle-making as few assumptions as possible about the statistical structure of the world. Second, neural representations should convey, as much as possible, equivalent information about environments with different statistics. The results of these arguments resemble the structure of the visual system and provide a natural explanation of the behavioral Weber-Fechner law, a foundational result in psychology. Because the derivation is extremely general, this suggests that similar scaling relationships should be observed not only in sensory continua, but also in neural representations of "cognitive" 1-dimensional quantities such as time or numerosity. (PsycINFO Database Record
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Affiliation(s)
- Marc W Howard
- Department of Psychological and Brain Sciences, Boston University
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24
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Eichenbaum H. On the Integration of Space, Time, and Memory. Neuron 2017; 95:1007-1018. [PMID: 28858612 PMCID: PMC5662113 DOI: 10.1016/j.neuron.2017.06.036] [Citation(s) in RCA: 268] [Impact Index Per Article: 38.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2017] [Revised: 06/20/2017] [Accepted: 06/22/2017] [Indexed: 01/11/2023]
Abstract
The hippocampus is famous for mapping locations in spatially organized environments, and several recent studies have shown that hippocampal networks also map moments in temporally organized experiences. Here I consider how space and time are integrated in the representation of memories. The brain pathways for spatial and temporal cognition involve overlapping and interacting systems that converge on the hippocampal region. There is evidence that spatial and temporal aspects of memory are processed somewhat differently in the circuitry of hippocampal subregions but become fully integrated within CA1 neuronal networks as independent, multiplexed representations of space and time. Hippocampal networks also map memories across a broad range of abstract relations among events, suggesting that the findings on spatial and temporal organization reflect a generalized mechanism for organizing memories.
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Fronto-parietal Cortical Circuits Encode Accumulated Evidence with a Diversity of Timescales. Neuron 2017; 95:385-398.e5. [PMID: 28669543 DOI: 10.1016/j.neuron.2017.06.013] [Citation(s) in RCA: 85] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2016] [Revised: 04/04/2017] [Accepted: 06/06/2017] [Indexed: 01/04/2023]
Abstract
Decision-making in dynamic environments often involves accumulation of evidence, in which new information is used to update beliefs and select future actions. Using in vivo cellular resolution imaging in voluntarily head-restrained rats, we examined the responses of neurons in frontal and parietal cortices during a pulse-based accumulation of evidence task. Neurons exhibited activity that predicted the animal's upcoming choice, previous choice, and graded responses that reflected the strength of the accumulated evidence. The pulsatile nature of the stimuli enabled characterization of the responses of neurons to a single quantum (pulse) of evidence. Across the population, individual neurons displayed extensive heterogeneity in the dynamics of responses to pulses. The diversity of responses was sufficiently rich to form a temporal basis for accumulated evidence estimated from a latent variable model. These results suggest that heterogeneous, often transient sensory responses distributed across the fronto-parietal cortex may support working memory on behavioral timescales. VIDEO ABSTRACT.
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26
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Hasselmo ME, Hinman JR, Dannenberg H, Stern CE. Models of spatial and temporal dimensions of memory. Curr Opin Behav Sci 2017; 17:27-33. [PMID: 29130060 DOI: 10.1016/j.cobeha.2017.05.024] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Episodic memory involves coding of the spatial location and time of individual events. Coding of space and time is also relevant to working memory, spatial navigation, and the disambiguation of overlapping memory representations. Neurophysiological data demonstrate that neuronal activity codes the current, past and future location of an animal as well as temporal intervals within a task. Models have addressed how neural coding of space and time for memory function could arise, with both dimensions coded by the same neurons. Neural coding could depend upon network oscillatory and attractor dynamics as well as modulation of neuronal intrinsic properties. These models are relevant to the coding of space and time involving structures including the hippocampus, entorhinal cortex, retrosplenial cortex, striatum and parahippocampal gyrus, which have been implicated in both animal and human studies.
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Affiliation(s)
- Michael E Hasselmo
- Center for Systems Neuroscience, Boston University, 610 Commonwealth Ave., Boston, MA 02215
| | - James R Hinman
- Center for Systems Neuroscience, Boston University, 610 Commonwealth Ave., Boston, MA 02215
| | - Holger Dannenberg
- Center for Systems Neuroscience, Boston University, 610 Commonwealth Ave., Boston, MA 02215
| | - Chantal E Stern
- Center for Systems Neuroscience, Boston University, 610 Commonwealth Ave., Boston, MA 02215
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27
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A Linear Analysis of Coupled Wilson-Cowan Neuronal Populations. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2016; 2016:8939218. [PMID: 27725829 PMCID: PMC5048090 DOI: 10.1155/2016/8939218] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/23/2016] [Accepted: 08/04/2016] [Indexed: 11/18/2022]
Abstract
Let a neuronal population be composed of an excitatory group interconnected to an inhibitory group. In the Wilson-Cowan model, the activity of each group of neurons is described by a first-order nonlinear differential equation. The source of the nonlinearity is the interaction between these two groups, which is represented by a sigmoidal function. Such a nonlinearity makes difficult theoretical works. Here, we analytically investigate the dynamics of a pair of coupled populations described by the Wilson-Cowan model by using a linear approximation. The analytical results are compared to numerical simulations, which show that the trajectories of this fourth-order dynamical system can converge to an equilibrium point, a limit cycle, a two-dimensional torus, or a chaotic attractor. The relevance of this study is discussed from a biological perspective.
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28
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Shankar KH, Singh I, Howard MW. Neural Mechanism to Simulate a Scale-Invariant Future. Neural Comput 2016; 28:2594-2627. [PMID: 27626961 DOI: 10.1162/neco_a_00891] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Predicting the timing and order of future events is an essential feature of cognition in higher life forms. We propose a neural mechanism to nondestructively translate the current state of spatiotemporal memory into the future, so as to construct an ordered set of future predictions almost instantaneously. We hypothesize that within each cycle of hippocampal theta oscillations, the memory state is swept through a range of translations to yield an ordered set of future predictions through modulations in synaptic connections. Theoretically, we operationalize critical neurobiological findings from hippocampal physiology in terms of neural network equations representing spatiotemporal memory. Combined with constraints based on physical principles requiring scale invariance and coherence in translation across memory nodes, the proposition results in Weber-Fechner spacing for the representation of both past (memory) and future (prediction) timelines. We show that the phenomenon of phase precession of neurons in the hippocampus and ventral striatum correspond to the cognitive act of future prediction.
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Affiliation(s)
- Karthik H Shankar
- Center for Memory and Brain, Initiative for the Physics and Mathematics of Neural Systems, Boston University, Boston, MA 02215, U.S.A.
| | - Inder Singh
- Center for Memory and Brain, Initiative for the Physics and Mathematics of Neural Systems, Boston University, Boston, MA 02215, U.S.A.
| | - Marc W Howard
- Center for Memory and Brain, Initiative for the Physics and Mathematics of Neural Systems, Boston University, Boston, MA 02215, U.S.A.
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29
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Neymotin SA, McDougal RA, Bulanova AS, Zeki M, Lakatos P, Terman D, Hines ML, Lytton WW. Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex. Neuroscience 2016; 316:344-66. [PMID: 26746357 PMCID: PMC4724569 DOI: 10.1016/j.neuroscience.2015.12.043] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2015] [Revised: 12/16/2015] [Accepted: 12/21/2015] [Indexed: 01/08/2023]
Abstract
Neuronal persistent activity has been primarily assessed in terms of electrical mechanisms, without attention to the complex array of molecular events that also control cell excitability. We developed a multiscale neocortical model proceeding from the molecular to the network level to assess the contributions of calcium (Ca(2+)) regulation of hyperpolarization-activated cyclic nucleotide-gated (HCN) channels in providing additional and complementary support of continuing activation in the network. The network contained 776 compartmental neurons arranged in the cortical layers, connected using synapses containing AMPA/NMDA/GABAA/GABAB receptors. Metabotropic glutamate receptors (mGluR) produced inositol triphosphate (IP3) which caused the release of Ca(2+) from endoplasmic reticulum (ER) stores, with reuptake by sarco/ER Ca(2+)-ATP-ase pumps (SERCA), and influence on HCN channels. Stimulus-induced depolarization led to Ca(2+) influx via NMDA and voltage-gated Ca(2+) channels (VGCCs). After a delay, mGluR activation led to ER Ca(2+) release via IP3 receptors. These factors increased HCN channel conductance and produced firing lasting for ∼1min. The model displayed inter-scale synergies among synaptic weights, excitation/inhibition balance, firing rates, membrane depolarization, Ca(2+) levels, regulation of HCN channels, and induction of persistent activity. The interaction between inhibition and Ca(2+) at the HCN channel nexus determined a limited range of inhibition strengths for which intracellular Ca(2+) could prepare population-specific persistent activity. Interactions between metabotropic and ionotropic inputs to the neuron demonstrated how multiple pathways could contribute in a complementary manner to persistent activity. Such redundancy and complementarity via multiple pathways is a critical feature of biological systems. Mediation of activation at different time scales, and through different pathways, would be expected to protect against disruption, in this case providing stability for persistent activity.
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Affiliation(s)
- S A Neymotin
- Department of Physiology & Pharmacology, SUNY Downstate, 450 Clarkson Avenue, Brooklyn, NY 11203, USA; Department of Neuroscience, Yale University School of Medicine, 333 Cedar Street, New Haven, CT 06510, USA.
| | - R A McDougal
- Department of Neuroscience, Yale University School of Medicine, 333 Cedar Street, New Haven, CT 06510, USA.
| | - A S Bulanova
- Department of Physiology & Pharmacology, SUNY Downstate, 450 Clarkson Avenue, Brooklyn, NY 11203, USA; Department of Neuroscience, Yale University School of Medicine, 333 Cedar Street, New Haven, CT 06510, USA.
| | - M Zeki
- Department of Mathematics, Zirve University, 27260 Gaziantep, Turkey.
| | - P Lakatos
- Nathan Kline Institute for Psychiatric Research, 140 Old Orangeburg Road, Orangeburg, NY 10962, USA.
| | - D Terman
- Department of Mathematics, The Ohio State University, 231 W 18th Avenue, Columbus, OH 43210, USA.
| | - M L Hines
- Department of Neuroscience, Yale University School of Medicine, 333 Cedar Street, New Haven, CT 06510, USA.
| | - W W Lytton
- Department of Physiology & Pharmacology, SUNY Downstate, 450 Clarkson Avenue, Brooklyn, NY 11203, USA; Department of Neurology, SUNY Downstate, 450 Clarkson Avenue, Brooklyn, NY 11203, USA; Department Neurology, Kings County Hospital Center, 451 Clarkson Avenue, Brooklyn, NY 11203, USA.
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Hasselmo ME. If I had a million neurons: Potential tests of cortico-hippocampal theories. PROGRESS IN BRAIN RESEARCH 2015; 219:1-19. [PMID: 26072231 DOI: 10.1016/bs.pbr.2015.03.009] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Considerable excitement surrounds new initiatives to develop techniques for simultaneous recording of large populations of neurons in cortical structures. This chapter focuses on the potential value of large-scale simultaneous recording for advancing research on current issues in the function of cortical circuits, including the interaction of the hippocampus with cortical and subcortical structures. The review describes specific research questions that could be answered using large-scale population recording, including questions about the circuit dynamics underlying coding of dimensions of space and time for episodic memory, the role of GABAergic and cholinergic innervation from the medial septum, the functional role of spatial representations coded by grid cells, boundary cells, head direction cells, and place cells, and the fact that many models require cells coding movement direction.
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Affiliation(s)
- Michael E Hasselmo
- Department of Psychological and Brain Sciences, Center for Memory and Brain, Center for Systems Neuroscience, Graduate Program for Neuroscience, Boston University, Boston, MA, USA.
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31
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Hasselmo ME, Stern CE. Current questions on space and time encoding. Hippocampus 2015; 25:744-52. [PMID: 25786389 DOI: 10.1002/hipo.22454] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/17/2015] [Indexed: 01/18/2023]
Abstract
The Nobel Prize in Physiology or Medicine 2014 celebrated the groundbreaking findings on place cells and grid cells by John O'Keefe and May-Britt Moser and Edvard Moser. These findings provided an essential foothold for understanding the cognitive encoding of space and time in episodic memory function. This foothold provides a closer view of a broad new world of important research questions raised by the phenomena of place cells and grid cells. These questions concern the mechanisms of generation of place and grid cell firing, including sensory influences, circuit dynamics and intrinsic properties. Similar questions concern the generation of time cells. In addition, questions concern the functional role of place cells, grid cells and time cells in mediating goal-directed behavior and episodic memory function.
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Affiliation(s)
- Michael E Hasselmo
- Center for Systems Neuroscience, Center for Memory and Brain, Department of Psychological and Brain Sciences and Graduate Program for Neuroscience, Boston University, Boston, Massachusetts
| | - Chantal E Stern
- Center for Systems Neuroscience, Center for Memory and Brain, Department of Psychological and Brain Sciences and Graduate Program for Neuroscience, Boston University, Boston, Massachusetts
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