1
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Bardon AG, Ballesteros JJ, Brincat SL, Roy JE, Mahnke MK, Ishizawa Y, Brown EN, Miller EK. Convergent effects of different anesthetics are due to changes in phase alignment of cortical oscillations. bioRxiv 2024:2024.03.20.585943. [PMID: 38562734 PMCID: PMC10983946 DOI: 10.1101/2024.03.20.585943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
Many different anesthetics cause loss of responsiveness despite having diverse underlying molecular and circuit actions. To explore the convergent effects of these drugs, we examined how ketamine, an N-methyl-D-aspartate (NMDA) receptor antagonist, and dexmedetomidine, an α2 adrenergic receptor agonist, affected neural oscillations in the prefrontal cortex of nonhuman primates. Previous work has shown that anesthesia increases phase locking of low-frequency local field potential activity across cortex. We observed similar increases with anesthetic doses of ketamine and dexmedetomidine in the ventrolateral and dorsolateral prefrontal cortex, within and across hemispheres. However, the nature of the phase locking varied between regions. We found that oscillatory activity in different prefrontal subregions within each hemisphere became more anti-phase with both drugs. Local analyses within a region suggested that this finding could be explained by broad cortical distance-based effects, such as a large traveling wave. By contrast, homologous areas across hemispheres increased their phase alignment. Our results suggest that the drugs induce strong patterns of cortical phase alignment that are markedly different from those in the awake state, and that these patterns may be a common feature driving loss of responsiveness from different anesthetic drugs.
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2
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Tauber JM, Brincat SL, Stephen EP, Donoghue JA, Kozachkov L, Brown EN, Miller EK. Propofol-mediated Unconsciousness Disrupts Progression of Sensory Signals through the Cortical Hierarchy. J Cogn Neurosci 2024; 36:394-413. [PMID: 37902596 DOI: 10.1162/jocn_a_02081] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2023]
Abstract
A critical component of anesthesia is the loss of sensory perception. Propofol is the most widely used drug for general anesthesia, but the neural mechanisms of how and when it disrupts sensory processing are not fully understood. We analyzed local field potential and spiking recorded from Utah arrays in auditory cortex, associative cortex, and cognitive cortex of nonhuman primates before and during propofol-mediated unconsciousness. Sensory stimuli elicited robust and decodable stimulus responses and triggered periods of stimulus-related synchronization between brain areas in the local field potential of Awake animals. By contrast, propofol-mediated unconsciousness eliminated stimulus-related synchrony and drastically weakened stimulus responses and information in all brain areas except for auditory cortex, where responses and information persisted. However, we found stimuli occurring during spiking Up states triggered weaker spiking responses than in Awake animals in auditory cortex, and little or no spiking responses in higher order areas. These results suggest that propofol's effect on sensory processing is not just because of asynchronous Down states. Rather, both Down states and Up states reflect disrupted dynamics.
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Affiliation(s)
- John M Tauber
- Massachusetts Institute of Technology, Cambridge, MA
| | | | | | | | - Leo Kozachkov
- Massachusetts Institute of Technology, Cambridge, MA
| | - Emery N Brown
- Massachusetts Institute of Technology, Cambridge, MA
- Massachusetts General Hospital, Boston
- Harvard University, Cambridge, MA
| | - Earl K Miller
- Massachusetts Institute of Technology, Cambridge, MA
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3
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Tauber JM, Brincat SL, Stephen EP, Donaghue JA, Kozachkov L, Brown EN, Miller EK. Propofol Mediated Unconsciousness Disrupts Progression of Sensory Signals through the Cortical Hierarchy. bioRxiv 2023:2023.06.25.546463. [PMID: 37425684 PMCID: PMC10327085 DOI: 10.1101/2023.06.25.546463] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/11/2023]
Abstract
A critical component of anesthesia is the loss sensory perception. Propofol is the most widely used drug for general anesthesia, but the neural mechanisms of how and when it disrupts sensory processing are not fully understood. We analyzed local field potential (LFP) and spiking recorded from Utah arrays in auditory cortex, associative cortex, and cognitive cortex of non-human primates before and during propofol mediated unconsciousness. Sensory stimuli elicited robust and decodable stimulus responses and triggered periods of stimulus-induced coherence between brain areas in the LFP of awake animals. By contrast, propofol mediated unconsciousness eliminated stimulus-induced coherence and drastically weakened stimulus responses and information in all brain areas except for auditory cortex, where responses and information persisted. However, we found stimuli occurring during spiking Up states triggered weaker spiking responses than in awake animals in auditory cortex, and little or no spiking responses in higher order areas. These results suggest that propofol's effect on sensory processing is not just due to asynchronous down states. Rather, both Down states and Up states reflect disrupted dynamics.
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Affiliation(s)
- John M. Tauber
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Institute for Data, Systems, and Society, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
| | - Scott L. Brincat
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
| | - Emily P. Stephen
- Department of Mathematics and Statistics, Boston University, Boston, MA 02215, USA
| | - Jacob A. Donaghue
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Harvard-MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
| | - Leo Kozachkov
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
| | - Emery N. Brown
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Institute for Data, Systems, and Society, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Harvard-MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Department of Anesthesia, Massachusetts General Hospital, Boston, MA 02114, USA
- Harvard Medical School, Harvard University, Boston, MA 02115, USA
| | - Earl K. Miller
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA
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4
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Kozachkov L, Tauber J, Lundqvist M, Brincat SL, Slotine JJ, Miller EK. Robust and brain-like working memory through short-term synaptic plasticity. PLoS Comput Biol 2022; 18:e1010776. [PMID: 36574424 PMCID: PMC9829165 DOI: 10.1371/journal.pcbi.1010776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2022] [Revised: 01/09/2023] [Accepted: 11/29/2022] [Indexed: 12/29/2022] Open
Abstract
Working memory has long been thought to arise from sustained spiking/attractor dynamics. However, recent work has suggested that short-term synaptic plasticity (STSP) may help maintain attractor states over gaps in time with little or no spiking. To determine if STSP endows additional functional advantages, we trained artificial recurrent neural networks (RNNs) with and without STSP to perform an object working memory task. We found that RNNs with and without STSP were able to maintain memories despite distractors presented in the middle of the memory delay. However, RNNs with STSP showed activity that was similar to that seen in the cortex of a non-human primate (NHP) performing the same task. By contrast, RNNs without STSP showed activity that was less brain-like. Further, RNNs with STSP were more robust to network degradation than RNNs without STSP. These results show that STSP can not only help maintain working memories, it also makes neural networks more robust and brain-like.
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Affiliation(s)
- Leo Kozachkov
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
- Nonlinear Systems Laboratory, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
| | - John Tauber
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
- Institute for Data, Systems, and Society, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
| | - Mikael Lundqvist
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
- Department of Clinical Neuroscience, Karolinska Institute, Stockholm, Sweden
| | - Scott L. Brincat
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
| | - Jean-Jacques Slotine
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
- Nonlinear Systems Laboratory, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
| | - Earl K. Miller
- The Picower Institute for Learning & Memory, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
- Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, United States of America
- * E-mail:
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5
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Lundqvist M, Rose J, Brincat SL, Warden MR, Buschman TJ, Herman P, Miller EK. Reduced variability of bursting activity during working memory. Sci Rep 2022; 12:15050. [PMID: 36064880 PMCID: PMC9445015 DOI: 10.1038/s41598-022-18577-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Accepted: 08/16/2022] [Indexed: 12/03/2022] Open
Abstract
Working memories have long been thought to be maintained by persistent spiking. However, mounting evidence from multiple-electrode recording (and single-trial analyses) shows that the underlying spiking is better characterized by intermittent bursts of activity. A counterargument suggested this intermittent activity is at odds with observations that spike-time variability reduces during task performance. However, this counterargument rests on assumptions, such as randomness in the timing of the bursts, which may not be correct. Thus, we analyzed spiking and LFPs from monkeys’ prefrontal cortex (PFC) to determine if task-related reductions in variability can co-exist with intermittent spiking. We found that it does because both spiking and associated gamma bursts were task-modulated, not random. In fact, the task-related reduction in spike variability could largely be explained by a related reduction in gamma burst variability. Our results provide further support for the intermittent activity models of working memory as well as novel mechanistic insights into how spike variability is reduced during cognitive tasks.
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Affiliation(s)
- Mikael Lundqvist
- Department of Psychology, Department of Clinical Neuroscience, Karolinska Institute, Solna, Sweden. .,The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
| | - Jonas Rose
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.,Faculty of Psychology, Neural Basis of Learning, Ruhr University Bochum, 44801, Bochum, Germany
| | - Scott L Brincat
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
| | - Melissa R Warden
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.,Department of Neurobiology and Behavior, Cornell University, Ithaca, NY, 14853, USA
| | - Timothy J Buschman
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.,Princeton Neuroscience Institute, Princeton University, Washington Rd., Princeton, NJ, 08540, USA
| | - Pawel Herman
- Department of Computational Science and Technology, School of Electrical Engineering and Computer Science and Digital Futures, KTH Royal Institute of Technology, 100 44, Stockholm, Sweden
| | - Earl K Miller
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
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6
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Abstract
Oscillatory dynamics in cortex seem to organize into traveling waves that serve a variety of functions. Recent studies show that propofol, a widely used anesthetic, dramatically alters cortical oscillations by increasing slow-delta oscillatory power and coherence. It is not known how this affects traveling waves. We compared traveling waves across the cortex of non-human primates before, during, and after propofol-induced loss of consciousness (LOC). After LOC, traveling waves in the slow-delta (∼1 Hz) range increased, grew more organized, and traveled in different directions relative to the awake state. Higher frequency (8-30 Hz) traveling waves, by contrast, decreased, lost structure, and switched to directions where the slow-delta waves were less frequent. The results suggest that LOC may be due, in part, to increases in the strength and direction of slow-delta traveling waves that, in turn, alter and disrupt traveling waves in the higher frequencies associated with cognition.
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Affiliation(s)
| | | | | | | | - Emery N Brown
- Massachusetts Institute of Technology, Cambridge.,Massachusetts General Hospital/Harvard Medical School, Boston
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7
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Bastos AM, Donoghue JA, Brincat SL, Mahnke M, Yanar J, Correa J, Waite AS, Lundqvist M, Roy J, Brown EN, Miller EK. Neural effects of propofol-induced unconsciousness and its reversal using thalamic stimulation. eLife 2021; 10:60824. [PMID: 33904411 PMCID: PMC8079153 DOI: 10.7554/elife.60824] [Citation(s) in RCA: 51] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Accepted: 03/28/2021] [Indexed: 01/05/2023] Open
Abstract
The specific circuit mechanisms through which anesthetics induce unconsciousness have not been completely characterized. We recorded neural activity from the frontal, parietal, and temporal cortices and thalamus while maintaining unconsciousness in non-human primates (NHPs) with the anesthetic propofol. Unconsciousness was marked by slow frequency (~1 Hz) oscillations in local field potentials, entrainment of local spiking to Up states alternating with Down states of little or no spiking activity, and decreased coherence in frequencies above 4 Hz. Thalamic stimulation ‘awakened’ anesthetized NHPs and reversed the electrophysiologic features of unconsciousness. Unconsciousness is linked to cortical and thalamic slow frequency synchrony coupled with decreased spiking, and loss of higher-frequency dynamics. This may disrupt cortical communication/integration.
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Affiliation(s)
- André M Bastos
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
| | - Jacob A Donoghue
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
| | - Scott L Brincat
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
| | - Meredith Mahnke
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
| | - Jorge Yanar
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
| | - Josefina Correa
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
| | - Ayan S Waite
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
| | - Mikael Lundqvist
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
| | - Jefferson Roy
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
| | - Emery N Brown
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States.,The Department of Anesthesia, Critical Care and Pain Medicine, Massachusetts General Hospital/Harvard Medical School, Boston, United States.,The Institute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, United States
| | - Earl K Miller
- The Picower Institute for Learning and Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, United States
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8
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Cruzado NA, Tiganj Z, Brincat SL, Miller EK, Howard MW. Conjunctive representation of what and when in monkey hippocampus and lateral prefrontal cortex during an associative memory task. Hippocampus 2020; 30:1332-1346. [DOI: 10.1002/hipo.23282] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2019] [Revised: 10/20/2020] [Accepted: 10/26/2020] [Indexed: 12/13/2022]
Affiliation(s)
- Nathanael A. Cruzado
- Department of Psychological and Brain Sciences Boston University Boston Massachusetts USA
| | - Zoran Tiganj
- Department of Psychological and Brain Sciences Boston University Boston Massachusetts USA
| | - Scott L. Brincat
- Picower Institute of Learning and Memory, MIT Cambridge Massachusetts USA
- Department of Brain and Cognitive Sciences MIT Cambridge Massachusetts USA
| | - Earl K. Miller
- Picower Institute of Learning and Memory, MIT Cambridge Massachusetts USA
- Department of Brain and Cognitive Sciences MIT Cambridge Massachusetts USA
| | - Marc W. Howard
- Department of Psychological and Brain Sciences Boston University Boston Massachusetts USA
- Center for Memory and Brain, Boston University Boston Massachusetts USA
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9
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Ito T, Brincat SL, Siegel M, Mill RD, He BJ, Miller EK, Rotstein HG, Cole MW. Task-evoked activity quenches neural correlations and variability across cortical areas. PLoS Comput Biol 2020; 16:e1007983. [PMID: 32745096 PMCID: PMC7425988 DOI: 10.1371/journal.pcbi.1007983] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2020] [Revised: 08/13/2020] [Accepted: 05/27/2020] [Indexed: 02/06/2023] Open
Abstract
Many large-scale functional connectivity studies have emphasized the importance of communication through increased inter-region correlations during task states. In contrast, local circuit studies have demonstrated that task states primarily reduce correlations among pairs of neurons, likely enhancing their information coding by suppressing shared spontaneous activity. Here we sought to adjudicate between these conflicting perspectives, assessing whether co-active brain regions during task states tend to increase or decrease their correlations. We found that variability and correlations primarily decrease across a variety of cortical regions in two highly distinct data sets: non-human primate spiking data and human functional magnetic resonance imaging data. Moreover, this observed variability and correlation reduction was accompanied by an overall increase in dimensionality (reflecting less information redundancy) during task states, suggesting that decreased correlations increased information coding capacity. We further found in both spiking and neural mass computational models that task-evoked activity increased the stability around a stable attractor, globally quenching neural variability and correlations. Together, our results provide an integrative mechanistic account that encompasses measures of large-scale neural activity, variability, and correlations during resting and task states.
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Affiliation(s)
- Takuya Ito
- Center for Molecular and Behavioral Neuroscience, Rutgers University, Newark, New Jersey, United States of America
- Behavioral and Neural Sciences PhD Program, Rutgers University, Newark, New Jersey, United States of America
| | - Scott L. Brincat
- The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
| | - Markus Siegel
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
- Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany
- MEG Center, University of Tübingen, Tübingen, Germany
| | - Ravi D. Mill
- Center for Molecular and Behavioral Neuroscience, Rutgers University, Newark, New Jersey, United States of America
| | - Biyu J. He
- Neuroscience Institute, New York University, New York, New York, United States of America
- Departments of Neurology, Neuroscience and Physiology, and Radiology, New York University, New York, New York, United States of America
| | - Earl K. Miller
- The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
| | - Horacio G. Rotstein
- Center for Molecular and Behavioral Neuroscience, Rutgers University, Newark, New Jersey, United States of America
- Federated Department of Biological Sciences, Rutgers University, Newark, New Jersey, United States of America
- Institute for Brain and Neuroscience Research, New Jersey Institute of Technology, Newark, New Jersey, United States of America
| | - Michael W. Cole
- Center for Molecular and Behavioral Neuroscience, Rutgers University, Newark, New Jersey, United States of America
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10
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Abstract
Angular measurements are often modeled as circular random variables, where there are natural circular analogues of moments, including correlation. Because a product of circles is a torus, a d-dimensional vector of circular random variables lies on a d-dimensional torus. For such vectors we present here a class of graphical models, which we call torus graphs, based on the full exponential family with pairwise interactions. The topological distinction between a torus and Euclidean space has several important consequences. Our development was motivated by the problem of identifying phase coupling among oscillatory signals recorded from multiple electrodes in the brain: oscillatory phases across electrodes might tend to advance or recede together, indicating coordination across brain areas. The data analyzed here consisted of 24 phase angles measured repeatedly across 840 experimental trials (replications) during a memory task, where the electrodes were in 4 distinct brain regions, all known to be active while memories are being stored or retrieved. In realistic numerical simulations, we found that a standard pairwise assessment, known as phase locking value, is unable to describe multivariate phase interactions, but that torus graphs can accurately identify conditional associations. Torus graphs generalize several more restrictive approaches that have appeared in various scientific literatures, and produced intuitive results in the data we analyzed. Torus graphs thus unify multivariate analysis of circular data and present fertile territory for future research.
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Affiliation(s)
- Natalie Klein
- Department of Statistics and Data Science, Carnegie Mellon University
| | - Josue Orellana
- Department of Statistics and Data Science, Carnegie Mellon University
| | - Scott L. Brincat
- The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology
| | - Earl K. Miller
- The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology
| | - Robert E. Kass
- Department of Statistics and Data Science, Carnegie Mellon University
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11
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Liu Y, Brincat SL, Miller EK, Hasselmo ME. A Geometric Characterization of Population Coding in the Prefrontal Cortex and Hippocampus during a Paired-Associate Learning Task. J Cogn Neurosci 2020; 32:1455-1465. [PMID: 32379002 DOI: 10.1162/jocn_a_01569] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Large-scale neuronal recording techniques have enabled discoveries of population-level mechanisms for neural computation. However, it is not clear how these mechanisms form by trial-and-error learning. In this article, we present an initial effort to characterize the population activity in monkey prefrontal cortex (PFC) and hippocampus (HPC) during the learning phase of a paired-associate task. To analyze the population data, we introduce the normalized distance, a dimensionless metric that describes the encoding of cognitive variables from the geometrical relationship among neural trajectories in state space. It is found that PFC exhibits a more sustained encoding of the visual stimuli, whereas HPC only transiently encodes the identity of the associate stimuli. Surprisingly, after learning, the neural activity is not reorganized to reflect the task structure, raising the possibility that learning is accompanied by some "silent" mechanism that does not explicitly change the neural representations. We did find partial evidence on the learning-dependent changes for some of the task variables. This study shows the feasibility of using normalized distance as a metric to characterize and compare population-level encoding of task variables and suggests further directions to explore learning-dependent changes in the neural circuits.
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12
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Jia N, Brincat SL, Salazar-Gómez AF, Panko M, Guenther FH, Miller EK. Decoding of intended saccade direction in an oculomotor brain-computer interface. J Neural Eng 2018; 14:046007. [PMID: 28098561 DOI: 10.1088/1741-2552/aa5a3e] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
OBJECTIVE To date, invasive brain-computer interface (BCI) research has largely focused on replacing lost limb functions using signals from the hand/arm areas of motor cortex. However, the oculomotor system may be better suited to BCI applications involving rapid serial selection from spatial targets, such as choosing from a set of possible words displayed on a computer screen in an augmentative and alternative communication (AAC) application. Here we aimed to demonstrate the feasibility of a BCI utilizing the oculomotor system. APPROACH We developed a chronic intracortical BCI in monkeys to decode intended saccadic eye movement direction using activity from multiple frontal cortical areas. MAIN RESULTS Intended saccade direction could be decoded in real time with high accuracy, particularly at contralateral locations. Accurate decoding was evident even at the beginning of the BCI session; no extensive BCI experience was necessary. High-frequency (80-500 Hz) local field potential magnitude provided the best performance, even over spiking activity, thus simplifying future BCI applications. Most of the information came from the frontal and supplementary eye fields, with relatively little contribution from dorsolateral prefrontal cortex. SIGNIFICANCE Our results support the feasibility of high-accuracy intracortical oculomotor BCIs that require little or no practice to operate and may be ideally suited for 'point and click' computer operation as used in most current AAC systems.
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Affiliation(s)
- Nan Jia
- Center for Computational Neuroscience and Neural Technology, Boston University, 677 Beacon Street, Boston, MA 02215, United States of America. Graduate Program in Cognitive and Neural Systems, Boston University, 677 Beacon Street, Boston, MA 02215, United States of America
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13
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Abstract
The problem of identifying functional connectivity from multiple time series data recorded in each of two or more brain areas arises in many neuroscientific investigations. For a single stationary time series in each of two brain areas statistical tools such as cross-correlation and Granger causality may be applied. On the other hand, to examine multivariate interactions at a single time point, canonical correlation, which finds the linear combinations of signals that maximize the correlation, may be used. We report here a new method that produces interpretations much like these standard techniques and, in addition, 1) extends the idea of canonical correlation to 3-way arrays (with dimensionality number of signals by number of time points by number of trials), 2) allows for nonstationarity, 3) also allows for nonlinearity, 4) scales well as the number of signals increases, and 5) captures predictive relationships, as is done with Granger causality. We demonstrate the effectiveness of the method through simulation studies and illustrate by analyzing local field potentials recorded from a behaving primate. NEW & NOTEWORTHY Multiple signals recorded from each of multiple brain regions may contain information about cross-region interactions. This article provides a method for visualizing the complicated interdependencies contained in these signals and assessing them statistically. The method combines signals optimally but allows the resulting measure of dependence to change, both within and between regions, as the responses evolve dynamically across time. We demonstrate the effectiveness of the method through numerical simulations and by uncovering a novel connectivity pattern between hippocampus and prefrontal cortex during a declarative memory task.
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Affiliation(s)
- Jordan Rodu
- Department of Statistics, University of Virginia , Charlottesville, Virginia
| | - Natalie Klein
- Department of Statistics, Carnegie Mellon University , Pittsburgh, Pennsylvania.,Machine Learning Department, Carnegie Mellon University , Pittsburgh, Pennsylvania
| | - Scott L Brincat
- The Picower Institute for Learning and Memory, Massachusetts Institute of Technology , Cambridge, Massachusetts.,Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology , Cambridge, Massachusetts
| | - Earl K Miller
- The Picower Institute for Learning and Memory, Massachusetts Institute of Technology , Cambridge, Massachusetts.,Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology , Cambridge, Massachusetts
| | - Robert E Kass
- Department of Statistics, Carnegie Mellon University , Pittsburgh, Pennsylvania.,Machine Learning Department, Carnegie Mellon University , Pittsburgh, Pennsylvania.,Center for the Neural Basis of Cognition, Carnegie Mellon University/University of Pittsburgh , Pittsburgh, Pennsylvania
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14
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Loonis RF, Brincat SL, Antzoulatos EG, Miller EK. A Meta-Analysis Suggests Different Neural Correlates for Implicit and Explicit Learning. Neuron 2017; 96:521-534.e7. [PMID: 29024670 DOI: 10.1016/j.neuron.2017.09.032] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2017] [Revised: 08/07/2017] [Accepted: 09/20/2017] [Indexed: 10/18/2022]
Abstract
A meta-analysis of non-human primates performing three different tasks (Object-Match, Category-Match, and Category-Saccade associations) revealed signatures of explicit and implicit learning. Performance improved equally following correct and error trials in the Match (explicit) tasks, but it improved more after correct trials in the Saccade (implicit) task, a signature of explicit versus implicit learning. Likewise, error-related negativity, a marker for error processing, was greater in the Match (explicit) tasks. All tasks showed an increase in alpha/beta (10-30 Hz) synchrony after correct choices. However, only the implicit task showed an increase in theta (3-7 Hz) synchrony after correct choices that decreased with learning. In contrast, in the explicit tasks, alpha/beta synchrony increased with learning and decreased thereafter. Our results suggest that explicit versus implicit learning engages different neural mechanisms that rely on different patterns of oscillatory synchrony.
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Affiliation(s)
- Roman F Loonis
- The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Department of Anatomy and Neurobiology, Boston University, Boston MA, 02118, USA
| | - Scott L Brincat
- The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Evan G Antzoulatos
- The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Center for Neuroscience, Department of Neurobiology, Physiology and Behavior, University of California Davis, Davis, CA 95616, USA
| | - Earl K Miller
- The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
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Lundqvist M, Rose J, Herman P, Brincat SL, Buschman TJ, Miller EK. Gamma and Beta Bursts Underlie Working Memory. Neuron 2016; 90:152-164. [PMID: 26996084 DOI: 10.1016/j.neuron.2016.02.028] [Citation(s) in RCA: 433] [Impact Index Per Article: 54.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2015] [Revised: 12/22/2015] [Accepted: 02/10/2016] [Indexed: 11/16/2022]
Abstract
Working memory is thought to result from sustained neuron spiking. However, computational models suggest complex dynamics with discrete oscillatory bursts. We analyzed local field potential (LFP) and spiking from the prefrontal cortex (PFC) of monkeys performing a working memory task. There were brief bursts of narrow-band gamma oscillations (45-100 Hz), varied in time and frequency, accompanying encoding and re-activation of sensory information. They appeared at a minority of recording sites associated with spiking reflecting the to-be-remembered items. Beta oscillations (20-35 Hz) also occurred in brief, variable bursts but reflected a default state interrupted by encoding and decoding. Only activity of neurons reflecting encoding/decoding correlated with changes in gamma burst rate. Thus, gamma bursts could gate access to, and prevent sensory interference with, working memory. This supports the hypothesis that working memory is manifested by discrete oscillatory dynamics and spiking, not sustained activity.
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Affiliation(s)
- Mikael Lundqvist
- The Picower Institute for Learning & Memory and Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology, 43 Vassar Street, Cambridge, MA 02139, USA
| | - Jonas Rose
- The Picower Institute for Learning & Memory and Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology, 43 Vassar Street, Cambridge, MA 02139, USA.,Animal Physiology, Institute for Neurobiology, Eberhard Karls University, Tübingen, Germany
| | - Pawel Herman
- Computational Brain Science Lab, Dept. Comp. Sci. & Tech, KTH Royal Institute of Technology, Stockholm, Sweden
| | - Scott L Brincat
- The Picower Institute for Learning & Memory and Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology, 43 Vassar Street, Cambridge, MA 02139, USA
| | - Timothy J Buschman
- The Picower Institute for Learning & Memory and Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology, 43 Vassar Street, Cambridge, MA 02139, USA.,Princeton Neuroscience Institute and Department of Psychology, Princeton University, Princeton, 08544, USA
| | - Earl K Miller
- The Picower Institute for Learning & Memory and Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology, 43 Vassar Street, Cambridge, MA 02139, USA
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Brincat SL, Miller EK. Frequency-specific hippocampal-prefrontal interactions during associative learning. Nat Neurosci 2015; 18:576-81. [PMID: 25706471 DOI: 10.1038/nn.3954] [Citation(s) in RCA: 121] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2014] [Accepted: 01/22/2015] [Indexed: 11/09/2022]
Abstract
Much of our knowledge of the world depends on learning associations (for example, face-name), for which the hippocampus (HPC) and prefrontal cortex (PFC) are critical. HPC-PFC interactions have rarely been studied in monkeys, whose cognitive and mnemonic abilities are akin to those of humans. We found functional differences and frequency-specific interactions between HPC and PFC of monkeys learning object pair associations, an animal model of human explicit memory. PFC spiking activity reflected learning in parallel with behavioral performance, whereas HPC neurons reflected feedback about whether trial-and-error guesses were correct or incorrect. Theta-band HPC-PFC synchrony was stronger after errors, was driven primarily by PFC to HPC directional influences and decreased with learning. In contrast, alpha/beta-band synchrony was stronger after correct trials, was driven more by HPC and increased with learning. Rapid object associative learning may occur in PFC, whereas HPC may guide neocortical plasticity by signaling success or failure via oscillatory synchrony in different frequency bands.
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Affiliation(s)
- Scott L Brincat
- 1] The Picower Institute for Learning and Memory, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA. [2] Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Earl K Miller
- 1] The Picower Institute for Learning and Memory, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA. [2] Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
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Abstract
We have previously analyzed shape processing dynamics in macaque monkey posterior inferotemporal cortex (PIT). We described how early PIT responses to individual contour fragments evolve into tuning for multifragment shape configurations. Here, we analyzed curvature processing dynamics in area V4, which provides feedforward inputs to PIT. We contrasted 2 hypotheses: 1) that V4 curvature tuning evolves from tuning for simpler elements, analogous to PIT shape synthesis and 2) that V4 curvature tuning emerges immediately, based on purely feedforward mechanisms. Our results clearly supported the first hypothesis. Early V4 responses carried information about individual contour orientations. Tuning for multiorientation (curved) contours developed gradually over ∼50 ms. Together, the current and previous results suggest a partial sequence for shape synthesis in ventral pathway cortex. We propose that early orientation signals are synthesized into curved contour fragment representations in V4 and that these signals are transmitted to PIT, where they are then synthesized into multifragment shape representations. The observed dynamics might additionally or alternatively reflect influences from earlier (V1, V2) and later (central and anterior IT) processing stages in the ventral pathway. In either case, the dynamics of contour information in V4 and PIT appear to reflect a sequential hierarchical process of shape synthesis.
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Affiliation(s)
- Jeffrey M Yau
- Zanvyl Krieger Mind/Brain Institute and Solomon H. Snyder Department of Neuroscience, Johns Hopkins University, Baltimore, MD 21218, USA.
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18
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Abstract
Object perception seems effortless to us, but it depends on intensive neural processing across multiple stages in ventral pathway visual cortex. Shape information at the retinal level is hopelessly complex, variable and implicit. The ventral pathway must somehow transform retinal signals into much more compact, stable and explicit representations of object shape. Recent findings highlight key aspects of this transformation: higher-order contour derivatives, structural representation in object-based coordinates, composite shape tuning dimensions, and long-term storage of object knowledge. These coding principles could help to explain our remarkable ability to perceive, distinguish, remember and understand a virtual infinity of objects.
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Affiliation(s)
- Charles E Connor
- Krieger Mind/Brain Institute, Department of Neuroscience, Johns Hopkins University, Baltimore, MD, USA.
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Abstract
How does the brain synthesize low-level neural signals for simple shape parts into coherent representations of complete objects? Here, we present evidence for a dynamic process of object part integration in macaque posterior inferotemporal cortex (IT). Immediately after stimulus onset, neural responses carried information about individual object parts (simple contour fragments) only. Subsequently, information about specific multipart configurations emerged, building gradually over the course of approximately 60 ms, producing a sparser and more explicit representation of object shape. We show that this gradual transformation can be explained by a recurrent network process that effectively compares parts signals across neurons to generate inferences about multipart shape configurations.
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Affiliation(s)
- Scott L Brincat
- Zanvyl Krieger Mind/Brain Institute, Department of Neuroscience, Johns Hopkins University, Baltimore, Maryland 21218, USA
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Brincat SL, Connor CE. Underlying principles of visual shape selectivity in posterior inferotemporal cortex. Nat Neurosci 2004; 7:880-6. [PMID: 15235606 DOI: 10.1038/nn1278] [Citation(s) in RCA: 289] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2004] [Accepted: 05/25/2004] [Indexed: 11/09/2022]
Abstract
Object perception depends on shape processing in the ventral visual pathway, which in monkeys culminates in inferotemporal cortex (IT). Here we provide a description of fundamental quantitative principles governing neural selectivity for complex shape in IT. By measuring responses to large, parametric sets of two-dimensional (2D) silhouette shapes, we found that neurons in posterior IT (Brodmann's areas TEO and posterior TE) integrate information about multiple contour elements (straight and curved edge fragments of the type represented in lower-level areas) using both linear and nonlinear mechanisms. This results in complex, distributed response patterns that cannot be characterized solely in terms of example stimuli. We explained these response patterns with tuning functions in multidimensional shape space and accurately predicted neural responses to the widely varying shapes in our stimulus set. Integration of contour element information in earlier stages of IT represents an important step in the transformation from low-level shape signals to complex object representation.
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Affiliation(s)
- Scott L Brincat
- Zanvyl Krieger Mind/Brain Institute and Department of Neuroscience, Johns Hopkins University, Baltimore, Maryland 21218, USA
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Abstract
Human observers can discriminate the orientation of a stimulus configuration composed of a pair of collinear visual patterns much better than that of a single component pattern alone. Previous investigations of this type of orientation signal integration and of other similar visual integrative functions have shown that, for closely spaced elements, there is integration only for stimuli with the same contrast polarity (i.e., both lighter or both darker than the background) but, at greater separations, integration is independent of contrast polarity. Is this effect specific to differences in contrast polarity, which is known to be an important parameter in the organization of the visual system, or might there be a cluster of other stimulus dimensions that show similar effects, indicating a more widespread distinction between the processes limiting integration at local and long-range spatial scales? Here, we report a similar distance dependence for orientation signal integration across stimulus differences in binocular disparity, direction of motion, and direction of figure-ground assignment. We also demonstrate that the selectivity found at short separations cannot be explained only by "end-cuts," the small borders created at the junction of abutting contrasting patterns. These findings imply the existence of two distinct spatial domains for the integration of foveal orientation information: a local zone in which integration is highly selective for a number of salient stimulus parameters and a long-range domain in which integration is relatively unselective and only requires that patterns be roughly collinear.
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Affiliation(s)
- S L Brincat
- Division of Neurobiology, University of California, Berkeley, California 94720, USA
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