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Choudaker KR, Singh VK, Kashyap AS, Patel AV, Sameriya KK, Yadav D, Manzar N, Kamil D, Prasad L, Saharan MS. Evaluating the efficacy of microbial antagonists in inducing resistance, promoting growth, and providing biological control against powdery mildew in wheat. Front Microbiol 2024; 15:1419547. [PMID: 39113835 PMCID: PMC11304452 DOI: 10.3389/fmicb.2024.1419547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2024] [Accepted: 07/01/2024] [Indexed: 08/10/2024] Open
Abstract
This study evaluates the biocontrol efficacy of three bacterial strains (Pseudomonas fluorescens DTPF-3, Bacillus amyloliquefaciens DTBA-11, and Bacillus subtilis DTBS-5) and two fungal strains (Trichoderma harzianum Pusa-5SD and Aspergillus niger An-27) antagonists, along with their combinations at varying doses (5.0, 7.5, and 10.0 g/kg of seeds), against wheat powdery mildew. The most effective dose (10 g/kg seeds) was further analyzed for its impact on induced resistance and plant growth promotion under greenhouse conditions. The study measured defense enzyme activities, biochemical changes, and post-infection plant growth metrics. All tested microbial antagonists at 10 g/kg significantly reduced PM severity, with B. subtilis strain DTBS-5 outperforming others in reducing PM severity and achieving the highest biocontrol efficacy. It was followed by B. amyloliquefaciens strain DTBA-11 and P. fluorescens strain DTPF-3, with the fungal antagonists showing no significant effect. Wheat crops treated with B. subtilis strain DTBS-5 exhibited substantial increases in defense-related enzyme activities and biochemicals, suggesting an induced resistance mechanism. The study found a 45% increase in peroxidase (POD) activity, a 50% increase in catalase (CAT) activity, a 30% increase in phenolic content, and a 25% increase in soluble protein content in the wheat plants treated with microbial antagonists. The study highlights the effectiveness of microbial antagonists, particularly B. subtilis strain DTBS-5, in managing wheat PM through biocontrol, induced resistance, and enhanced plant growth, offering a sustainable alternative to chemical treatments.
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Affiliation(s)
- Kariyappa R. Choudaker
- Wheat Pathology Laboratory, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Vaibhav Kumar Singh
- Wheat Pathology Laboratory, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Abhijeet Shankar Kashyap
- Molecular Biology Lab, ICAR-National Bureau of Agriculturally Important Microorganisms, Mau, Uttar Pradesh, India
| | - Aakash V. Patel
- Wheat Pathology Laboratory, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Koshal K. Sameriya
- Wheat Pathology Laboratory, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Dhananjay Yadav
- Wheat Pathology Laboratory, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Nazia Manzar
- Molecular Biology Lab, ICAR-National Bureau of Agriculturally Important Microorganisms, Mau, Uttar Pradesh, India
| | - Deeba Kamil
- Wheat Pathology Laboratory, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Lakshman Prasad
- Wheat Pathology Laboratory, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - M. S. Saharan
- Wheat Pathology Laboratory, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
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Jiang Y, Wang J. The Registration Situation and Use of Mycopesticides in the World. J Fungi (Basel) 2023; 9:940. [PMID: 37755048 PMCID: PMC10532538 DOI: 10.3390/jof9090940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 09/13/2023] [Accepted: 09/14/2023] [Indexed: 09/28/2023] Open
Abstract
Mycopesticides are living preparations that use fungal cells, such as spores and hyphae, as active ingredients. They mainly include mycoinsecticides, mycofungicides, mycoherbicides and nematophagous fungi. The utilization of fungi for controlling agricultural pests can be traced back to approximately 1880, when entomopathogenic fungi were initially employed for this purpose. However, it was not until 1965 that the world's first mycopesticide, Beauveria bassiana, was registered as Boverin® in the former Soviet Union. In past decades, numerous novel mycopesticides have been developed for their lower R&D costs, as well as the environmentally friendly and safe nature. In this review, we investigated the mycopesticides situation of registration in USA, EU, China, Canada and Australia. Superisingly, it was found that the registered mycopesticides are extremely raised in recent years. Currently, the insecticides, fungicides (nematocides) and herbicides were respectively registered 27, 53 and 8 fungal strains. This paper also analyzes the main problems currently faced by mycopesticides and offers suggestions for their future development.
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Affiliation(s)
- Yali Jiang
- College of Plant Protection, South China Agricultural University, Guangzhou 510642, China;
| | - Jingjing Wang
- College of Plant Protection, South China Agricultural University, Guangzhou 510642, China;
- College of Horticulture, South China Agricultural University, Guangzhou 510642, China
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Uniting the Role of Endophytic Fungi against Plant Pathogens and Their Interaction. J Fungi (Basel) 2023; 9:jof9010072. [PMID: 36675893 PMCID: PMC9860820 DOI: 10.3390/jof9010072] [Citation(s) in RCA: 23] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Revised: 12/21/2022] [Accepted: 12/25/2022] [Indexed: 01/06/2023] Open
Abstract
Endophytic fungi are used as the most common microbial biological control agents (MBCAs) against phytopathogens and are ubiquitous in all plant parts. Most of the fungal species have roles against a variety of plant pathogens. Fungal endophytes provide different services to be used as pathogen control agents, using an important aspect in the form of enhanced plant growth and induced systemic resistance, produce a variety of antifungal secondary metabolites (lipopeptides, antibiotics and enzymes) through colonization, and compete with other pathogenic microorganisms for growth factors (space and nutrients). The purpose of this review is to highlight the biological control potential of fungal species with antifungal properties against different fungal plant pathogens. We focused on the introduction, biology, isolation, identification of endophytic fungi, and their antifungal activity against fungal plant pathogens. The endosymbionts have developed specific genes that exhibited endophytic behavior and demonstrated defensive responses against pathogens such as antibiosis, parasitism, lytic enzyme and competition, siderophore production, and indirect responses by induced systemic resistance (ISR) in the host plant. Finally, different microscopic detection techniques to study microbial interactions (endophytic and pathogenic fungal interactions) in host plants are briefly discussed.
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Zhu M, Duan X, Cai P, Zhang W, Liu Y, Cui J, Li Z, Qiu Z. Biocontrol action of Trichothecium roseum against the wheat powdery mildew fungus Blumeria graminis f. sp. tritici. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2022. [DOI: 10.3389/fsufs.2022.998830] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Trichothecium roseum is known to be a mycoparasite and inhibit phytopathogenic fungi. However, so far, only scarce information is available on the impacts of T. roseum on powdery mildews. Based on the morphological and molecular analysis, we identified T. roseum as a mycoparasite on colonies of the wheat powdery mildew fungus (Blumeria graminis f. sp. tritici, Bgt, recently clarified as B. graminis s. str.) and then showed that T. roseum was capable of efficiently impairing colony formation and conidial distribution of Bgt. After inoculation of T. roseum conidia on Bgt colonies, the biomasses of Bgt significantly decreased 1.46, 1.64, 7.55, and 10.49 times at 2, 4, 6, and 8 dpi, respectively. Thus, T. roseum, acting as a potential biological agent, impeded the developments of Bgt, making it a viable alternative for wheat powdery mildew control. Utilizing the Agrobacterium tumefaciens-mediated transformation (ATMT) system, a T. roseum strain that constitutively expressed green fluorescent protein was produced to improve the visualization of the T. roseum-Bgt interaction and showed direct hyphae interaction of T. roseum with Bgt structures during parasitic processes. These findings indicate that ATMT is a potent and efficient method for transforming T. roseum. Nevertheless, our results suggest that T. roseum is an antagonistic parasite of the wheat powdery mildew fungus, and hence, can be considered for phytopathogen management.
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Fungicolous Fungi on Pseudosclerotial Plates and Apothecia of Hymenoscyphus fraxineus and Their Biocontrol Potential. Microorganisms 2022; 10:microorganisms10112250. [DOI: 10.3390/microorganisms10112250] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 10/28/2022] [Accepted: 11/11/2022] [Indexed: 11/15/2022] Open
Abstract
In the present work, research tasks were carried out in the search for fungi with potential biocontrol possibilities in relation to the ash dieback pathogen, Hymenoscyphus fraxineus. In the years 2012–2021, dead petioles of F. excelsior and F. mandshurica were collected, on which morphological structures of H. fraxineus showed unusual symptoms of dying (apothecia) and signs of colonization by other fungi (pseudosclerotial plates). Based on morphological and molecular phylogenetic data, 18 fungal taxa were identified. Thirteen of them belong to Ascomycota: Clonostachys rosea, Cl. solani, Cordyceps sp., Minimidochium sp., Nemania diffusa, Fusarium sp., Pestalotiopsis sp., Trichoderma atroviride, T. harzianum, T. polysporum, T. rodmanii, T. tomentosum, Trichoderma sp., and five other taxa are represented by Basidiomycota: Corticiales sp., Cyathus olla, Efibula sp., Gymnopus sp. and Polyporales sp. In 108 dual cultures in vitro, three different types of interactions were distinguished: (i) physical colony contact (5.6%), (ii) presence of an inhibition zone between the colonies (0.9%), and (iii) copartner overgrowth of H. fraxineus colonies and partial or complete replacement of the pathogen (93.5%). In the dual cultures, various morphological deformations of H. fraxineus hyphae were observed: the development of apical or intercalary cytoplasmic extrusions, development of internal hyphae of the test fungi in pathogens’ hyphae, the deformation and disruption of significant sections of H. fraxineus hyphae via lysis and mycoparasitism, complete desolation of H. fraxineus cells and breakdown of hyphae into short fragments, and disappearing of pigment in the affected hyphae of H. fraxineus. The inoculation tests performed in vivo or in glass Petrie dishes showed that all the identified taxa were able to lead to pathological changes in H. fraxineus apothecia, and the mycelium of some of them completely covered pseudosclerotial plates of H. fraxineus. It was emphasized in the discussion that such activity of these fungi in forest stands may contribute to the reduction in the H. fraxineus inoculum reservoir.
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El-Saadony MT, Saad AM, Soliman SM, Salem HM, Ahmed AI, Mahmood M, El-Tahan AM, Ebrahim AAM, Abd El-Mageed TA, Negm SH, Selim S, Babalghith AO, Elrys AS, El-Tarabily KA, AbuQamar SF. Plant growth-promoting microorganisms as biocontrol agents of plant diseases: Mechanisms, challenges and future perspectives. FRONTIERS IN PLANT SCIENCE 2022; 13:923880. [PMID: 36275556 PMCID: PMC9583655 DOI: 10.3389/fpls.2022.923880] [Citation(s) in RCA: 43] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Accepted: 08/24/2022] [Indexed: 05/14/2023]
Abstract
Plant diseases and pests are risk factors that threaten global food security. Excessive chemical pesticide applications are commonly used to reduce the effects of plant diseases caused by bacterial and fungal pathogens. A major concern, as we strive toward more sustainable agriculture, is to increase crop yields for the increasing population. Microbial biological control agents (MBCAs) have proved their efficacy to be a green strategy to manage plant diseases, stimulate plant growth and performance, and increase yield. Besides their role in growth enhancement, plant growth-promoting rhizobacteria/fungi (PGPR/PGPF) could suppress plant diseases by producing inhibitory chemicals and inducing immune responses in plants against phytopathogens. As biofertilizers and biopesticides, PGPR and PGPF are considered as feasible, attractive economic approach for sustainable agriculture; thus, resulting in a "win-win" situation. Several PGPR and PGPF strains have been identified as effective BCAs under environmentally controlled conditions. In general, any MBCA must overcome certain challenges before it can be registered or widely utilized to control diseases/pests. Successful MBCAs offer a practical solution to improve greenhouse crop performance with reduced fertilizer inputs and chemical pesticide applications. This current review aims to fill the gap in the current knowledge of plant growth-promoting microorganisms (PGPM), provide attention about the scientific basis for policy development, and recommend further research related to the applications of PGPM used for commercial purposes.
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Affiliation(s)
- Mohamed T. El-Saadony
- Department of Agricultural Microbiology, Faculty of Agriculture, Zagazig University, Zagazig, Egypt
| | - Ahmed M. Saad
- Department of Biochemistry, Faculty of Agriculture, Zagazig University, Zagazig, Egypt
| | - Soliman M. Soliman
- Department of Internal Medicine and Infectious Diseases, Faculty of Veterinary Medicine, Cairo University, Giza, Egypt
| | - Heba M. Salem
- Department of Poultry Diseases, Faculty of Veterinary Medicine, Cairo University, Giza, Egypt
| | - Alshaymaa I. Ahmed
- Department of Agricultural Microbiology, Faculty of Agriculture, Beni-Suef University, Beni-Suef, Egypt
| | - Mohsin Mahmood
- Key Laboratory of Agro-Forestry Environmental Processes and Ecological Regulation of Hainan Province, Hainan University, Haikou, China
| | - Amira M. El-Tahan
- Plant Production Department, Arid Lands Cultivation Research Institute, The City of Scientific Research and Technological Applications, Alexandria, Egypt
| | - Alia A. M. Ebrahim
- Jiangsu Key Laboratory for Microbes and Genomics, School, of Life Sciences, Nanjing Normal University, Nanjing, China
| | - Taia A. Abd El-Mageed
- Department of Soils and Water, Faculty of Agriculture, Fayoum University, Fayoum, Egypt
| | - Shaimaa H. Negm
- Department of Home Economic, Specific Education Faculty, Port Said University, Port Said, Egypt
| | - Samy Selim
- Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, Jouf University, Sakaka, Saudi Arabia
| | - Ahmad O. Babalghith
- Medical Genetics Department, College of Medicine, Umm Al-Qura University, Makkah, Saudi Arabia
| | - Ahmed S. Elrys
- Soil Science Department, Faculty of Agriculture, Zagazig University, Zagazig, Egypt
| | - Khaled A. El-Tarabily
- Department of Biology, College of Science, United Arab Emirates University, Al-Ain, United Arab Emirates
- Khalifa Center for Genetic Engineering and Biotechnology, United Arab Emirates University, Al-Ain, United Arab Emirates
- Harry Butler Institute, Murdoch University, Murdoch, WA, Australia
| | - Synan F. AbuQamar
- Department of Biology, College of Science, United Arab Emirates University, Al-Ain, United Arab Emirates
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Effect of Irrigation Dose on Powdery Mildew Incidence and Root Biomass of Sessile Oaks (Quercus petraea (Matt.) Liebl.). PLANTS 2022; 11:plants11091248. [PMID: 35567249 PMCID: PMC9103743 DOI: 10.3390/plants11091248] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Revised: 04/24/2022] [Accepted: 04/28/2022] [Indexed: 12/02/2022]
Abstract
The sessile oak is one of the most significant forest tree species in Europe. This species is vulnerable to various stresses, among which drought and powdery mildew have been the most serious threats. The aim of this study was to determine the influence of irrigation levels (overhead sprinklers) on the damage caused by powdery mildew to Quercus petraea growing in a nursery setting. Four irrigation rates were used: 100%, 75%, 50% and 25% of the full rate. The area of the leaves was measured and the ratio between the dry mass of the roots and the dry mass of the entire plant was calculated after the growing season in years’ 2015 and 2016. Limiting the total amount of water provided to a level between 53.6 mm × m−2 and 83.6 mm × m−2, particularly in the months when total precipitation was low (VII and VIII 2015), a supplemental irrigation rate between 3 and 9 mm × m−2 resulted in a lower severity of oak powdery mildew on leaves and lead to a favorable allocation of the biomass of the sessile oak seedlings to the root system. The severity of infection on oak leaf blades was lower when irrigation rates were reduced. The greatest mean degree of infestation in 2015 was noted in the 100% irrigation rate (14.6%), 75% (6.25%), 50% (4.35%) and 25% (5.47%). In 2016, there was no significant difference between the mean area of leaves infected by powdery mildew depending on the applied irrigation rate. The shoot-root biomass rate showed greater variation under limited irrigation rates. Controlling the irrigation rate can become an effective component of integrated protection strategies against this pathogen.
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Sulima AS, Zhukov VA. War and Peas: Molecular Bases of Resistance to Powdery Mildew in Pea ( Pisum sativum L.) and Other Legumes. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11030339. [PMID: 35161319 PMCID: PMC8838241 DOI: 10.3390/plants11030339] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Revised: 01/19/2022] [Accepted: 01/25/2022] [Indexed: 05/27/2023]
Abstract
Grain legumes, or pulses, have many beneficial properties that make them potentially attractive to agriculture. However, the large-scale cultivation of legumes faces a number of difficulties, in particular the vulnerability of the currently available cultivars to various diseases that significantly impair yields and seed quality. One of the most dangerous legume pathogens is powdery mildew (a common name for parasitic fungi of the order Erisyphales). This review examines the methods of controlling powdery mildew that are used in modern practice, including fungicides and biological agents. Special attention is paid to the plant genetic mechanisms of resistance, which are the most durable, universal and environmentally friendly. The most studied legume plant in this regard is the garden pea (Pisum sativum L.), which possesses naturally occurring resistance conferred by mutations in the gene MLO1 (Er1), for which we list here all the known resistant alleles, including er1-12 discovered by the authors of this review. Recent achievements in the genetics of resistance to powdery mildew in other legumes and prospects for the introduction of this resistance into other agriculturally important legume species are also discussed.
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Fournier P, Pellan L, Barroso-Bergadà D, Bohan DA, Candresse T, Delmotte F, Dufour MC, Lauvergeat V, Le Marrec C, Marais A, Martins G, Masneuf-Pomarède I, Rey P, Sherman D, This P, Frioux C, Labarthe S, Vacher C. The functional microbiome of grapevine throughout plant evolutionary history and lifetime. ADV ECOL RES 2022. [DOI: 10.1016/bs.aecr.2022.09.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Pijnakker J, Moerkens R, Vangansbeke D, Duarte M, Bellinkx S, Benavente A, Merckx J, Stevens I, Wäckers F. Dual protection: A tydeoid mite effectively controls both a problem pest and a key pathogen in tomato. PEST MANAGEMENT SCIENCE 2022; 78:355-361. [PMID: 34532955 DOI: 10.1002/ps.6647] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Accepted: 09/17/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND The tomato russet mite (TRM), Aculops lycopersici, and powdery mildew (PM), Oidium neolycopersici, are two major problems in tomato cultivation for which no effective biocontrol solutions exist to date. In a greenhouse compartment, we investigated the potential of preventatively establishing the iolinid omnivorous mite Pronematus ubiquitus on potted tomato plants to control both pest and pathogen simultaneously. RESULTS Using Typha pollen, P. ubiquitus established well on tomato plants, with numbers reaching up to 250 motiles per tomato leaflet. The built-up population was capable of controlling subsequent infestations with both TRM and PM. This represents the first report of an arthropod protecting a crop against pests as well as disease. CONCLUSION The implementation of P. ubiquitus in tomato crops could be a real game-changer as it eliminates the need for repeated pesticide use or sulphur applications. The finding that arthropods can effectively control diseases opens up new opportunities for biological crop protection. © 2021 Society of Chemical Industry.
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Gohel NM, Raghunandan BL, Patel NB, Parmar HV, Raval DB. Role of Fungal Biocontrol Agents for Sustainable Agriculture. Fungal Biol 2022. [DOI: 10.1007/978-981-16-8877-5_28] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Kolařík M, Wei IC, Hsieh SY, Piepenbring M, Kirschner R. Nucleotide composition bias of rDNA sequences as a source of phylogenetic artifacts in Basidiomycota—a case of a new lineage of a uredinicolous Ramularia-like anamorph with affinities to Ustilaginomycotina. Mycol Prog 2021. [DOI: 10.1007/s11557-021-01749-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Ahmed HFA, Seleiman MF, Al-Saif AM, Alshiekheid MA, Battaglia ML, Taha RS. Biological Control of Celery Powdery Mildew Disease Caused by Erysiphe heraclei DC In Vitro and In Vivo Conditions. PLANTS (BASEL, SWITZERLAND) 2021; 10:2342. [PMID: 34834704 PMCID: PMC8623452 DOI: 10.3390/plants10112342] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 10/23/2021] [Accepted: 10/26/2021] [Indexed: 06/13/2023]
Abstract
The present study aimed to investigate the potentiality of certain biocontrol agents, namely Bacillus subtilis, B. pumilus, B. megaterium, Pseudomonas fluorescens, Serratia marcescens, Trichoderma album, T. harzianum and T. viride, as well as the synthetic fungicide difenoconazole to control celery powdery mildew caused by Erysiphe heraclei DC, in vitro (against conidia germination and germ tube length of E. heraclei) and in vivo (against disease severity and AUDPC). In vitro, it was found that the antifungal activity of the tested biocontrol agents significantly reduced the germination percentage of the conidia and germ tube length of the pathogen. The reduction in conidia germination ranged between 88.2% and 59.6% as a result of the treatment with B. subtilis and T. album, respectively compared with 97.1% by the synthetic fungicide difenoconazole. Moreover, the fungicide achieved the highest reduction in germ tube length (92.5%) followed by B. megaterium (82.0%), while T. album was the least effective (62.8%). Spraying celery plants with the tested biocontrol agents in the greenhouse significantly reduced powdery mildew severity, as well as the area under the disease progress curve (AUDPC), after 7, 14, 21 and 28 days of application. In this regard, B. subtilis was the most efficient followed by B. pumilus, S. marcescens and B. megaterium, with 80.1, 74.4, 73.2 and 70.5% reductions in disease severity, respectively. In AUDPC, reductions of those microorganisms were 285.3, 380.9, 396.7 and 431.8, respectively, compared to 1539.1 in the control treatment. On the other hand, the fungicide difenoconazole achieved maximum efficacy in reducing disease severity (84.7%) and lowest AUDPC (219.3) compared to the other treatments. In the field, all the applied biocontrol agents showed high efficiency in suppressing powdery mildew on celery plants, with a significant improvement in growth and yield characteristics. In addition, they caused an increase in the concentration of leaf pigments, and the activities of defense-related enzymes such as peroxidase (PO) and polyphenol oxidase (PPO) and total phenol content (TPC). In conclusion, the results showed the possibility of using tested biocontrol agents as eco-friendly alternatives to protect celery plants against powdery mildew.
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Affiliation(s)
- Hamada F. A. Ahmed
- Department of Ornamental, Medicinal and Aromatic Plant Diseases, Plant Pathology Research Institute, Agricultural Research Center (ARC), Giza P.O. Box 12619, Egypt;
| | - Mahmoud F. Seleiman
- Department of Plant Production, College of Food and Agriculture Sciences, King Saud University, P.O. Box 2460, Riyadh 11451, Saudi Arabia;
| | - Adel M. Al-Saif
- Department of Plant Production, College of Food and Agriculture Sciences, King Saud University, P.O. Box 2460, Riyadh 11451, Saudi Arabia;
| | - Maha A. Alshiekheid
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia;
| | | | - Ragab S. Taha
- Botany Department, Faculty of Agriculture, Beni-Suef University, Beni Suef 62521, Egypt;
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Błaszczyk L, Salamon S, Mikołajczak K. Fungi Inhabiting the Wheat Endosphere. Pathogens 2021; 10:1288. [PMID: 34684238 PMCID: PMC8539314 DOI: 10.3390/pathogens10101288] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Revised: 10/01/2021] [Accepted: 10/04/2021] [Indexed: 01/22/2023] Open
Abstract
Wheat production is influenced by changing environmental conditions, including climatic conditions, which results in the changing composition of microorganisms interacting with this cereal. The group of these microorganisms includes not only endophytic fungi associated with the wheat endosphere, both pathogenic and symbiotic, but also those with yet unrecognized functions and consequences for wheat. This paper reviews the literature in the context of the general characteristics of endophytic fungi inhabiting the internal tissues of wheat. In addition, the importance of epigenetic regulation in wheat-fungus interactions is recognized and the current state of knowledge is demonstrated. The possibilities of using symbiotic endophytic fungi in modern agronomy and wheat cultivation are also proposed. The fact that the current understanding of fungal endophytes in wheat is based on a rather small set of experimental conditions, including wheat genotypes, plant organs, plant tissues, plant development stage, or environmental conditions, is recognized. In addition, most of the research to date has been based on culture-dependent methods that exclude biotrophic and slow-growing species and favor the detection of fast-growing fungi. Additionally, only a few reports of studies on the entire wheat microbiome using high-throughput sequencing techniques exist. Conducting comprehensive research on the mycobiome of the endosphere of wheat, mainly in the context of the possibility of using this knowledge to improve the methods of wheat management, mainly the productivity and health of this cereal, is needed.
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Affiliation(s)
- Lidia Błaszczyk
- Department of Plant Microbiomics, Institute of Plant Genetics, Polish Academy of Sciences, 34 Strzeszyńska Street, 60-479 Poznań, Poland; (S.S.); (K.M.)
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Olivieri L, Saville RJ, Gange AC, Xu X. Apple endophyte community in relation to location, scion and rootstock genotypes and susceptibility to European canker. FEMS Microbiol Ecol 2021; 97:fiab131. [PMID: 34601593 PMCID: PMC8497447 DOI: 10.1093/femsec/fiab131] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Accepted: 09/24/2021] [Indexed: 12/30/2022] Open
Abstract
European apple canker, caused by Neonectria ditissima, is a severe disease of apple. Achieving effective control is difficult with the currently available pesticides. Specific apple endophytes associated with cultivars may partially contribute to the cultivar response to the pathogen and thus could be used for disease management. We sought to determine whether the overall endophyte community differed among cultivars differing in their susceptibility to N. ditissima and to identify specific microbial groups associated with the susceptibility. Using Illumina MiSeq meta-barcoding, we profiled apple tree endophytes in 16 scion-rootstock combinations at two locations and quantified the relative contribution of scion, rootstock and location to the observed variability in the endophyte communities. Endophyte diversity was primarily affected by the orchard location (accounting for 29.4% and 85.9% of the total variation in the PC1 for bacteria and fungi, respectively), followed by the scion genotype (24.3% and 19.5% of PC2), whereas rootstock effects were small (<3% of PC1 and PC2). There were significant differences in the endophyte community between canker-resistant and -susceptible cultivars. Several bacterial and fungal endophyte groups had different relative abundance between susceptible and resistant cultivars. These endophyte groups included putative pathogen antagonists as well as plant pathogens. Their possible ecological roles in the N. ditissima pathosystem are discussed.
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Affiliation(s)
- Leone Olivieri
- NIAB EMR, New Road, East Malling, Kent ME19 6BJ, UK
- Department of Biological Sciences, Royal Holloway, University of London, Egham, Surrey TW20 0EX, UK
| | - Robert J Saville
- NIAB EMR, New Road, East Malling, Kent ME19 6BJ, UK
- Agriculture & Horticulture Development Board, Stoneleigh Park, Kenilworth, Warwickshire CV8 2TL, UK
| | - Alan C Gange
- Department of Biological Sciences, Royal Holloway, University of London, Egham, Surrey TW20 0EX, UK
| | - Xiangming Xu
- NIAB EMR, New Road, East Malling, Kent ME19 6BJ, UK
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Microbial biocontrol agents against chilli plant pathogens over synthetic pesticides: a review. PROCEEDINGS OF THE INDIAN NATIONAL SCIENCE ACADEMY 2021. [DOI: 10.1007/s43538-021-00053-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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17
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Németh MZ, Mizuno Y, Kobayashi H, Seress D, Shishido N, Kimura Y, Takamatsu S, Suzuki T, Takikawa Y, Kakutani K, Matsuda Y, Kiss L, Nonomura T. Ampelomyces strains isolated from diverse powdery mildew hosts in Japan: Their phylogeny and mycoparasitic activity, including timing and quantifying mycoparasitism of Pseudoidium neolycopersici on tomato. PLoS One 2021; 16:e0251444. [PMID: 33974648 PMCID: PMC8112701 DOI: 10.1371/journal.pone.0251444] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Accepted: 04/27/2021] [Indexed: 12/18/2022] Open
Abstract
A total of 26 Ampelomyces strains were isolated from mycelia of six different powdery mildew species that naturally infected their host plants in Japan. These were characterized based on morphological characteristics and sequences of ribosomal DNA internal transcribed spacer (rDNA-ITS) regions and actin gene (ACT) fragments. Collected strains represented six different genotypes and were accommodated in three different clades of the genus Ampelomyces. Morphology of the strains agreed with that of other Ampelomyces strains, but none of the examined characters were associated with any groups identified in the genetic analysis. Five powdery mildew species were inoculated with eight selected Ampelomyces strains to study their mycoparasitic activity. In the inoculation experiments, all Ampelomyces strains successfully infected all tested powdery mildew species, and showed no significant differences in their mycoparasitic activity as determined by the number of Ampelomyces pycnidia developed in powdery mildew colonies. The mycoparasitic interaction between the eight selected Ampelomyces strains and the tomato powdery mildew fungus (Pseudoidium neolycopersici strain KTP-03) was studied experimentally in the laboratory using digital microscopic technologies. It was documented that the spores of the mycoparasites germinated on tomato leaves and their hyphae penetrated the hyphae of Ps. neolycopersici. Ampelomyces hyphae continued their growth internally, which initiated the atrophy of the powdery mildew conidiophores 5 days post inoculation (dpi); caused atrophy 6 dpi; and complete collapse of the parasitized conidiphores 7 dpi. Ampelomyces strains produced new intracellular pycnidia in Ps. neolycopersici conidiophores ca. 8-10 dpi, when Ps. neolycopersici hyphae were successfully destroyed by the mycoparasitic strain. Mature pycnidia released spores ca. 10-14 dpi, which became the sources of subsequent infections of the intact powdery mildew hyphae. Mature pycnidia contained each ca. 200 to 1,500 spores depending on the mycohost species and Ampelomyces strain. This is the first detailed analysis of Ampelomyces strains isolated in Japan, and the first timing and quantification of mycoparasitism of Ps. neolycopersici on tomato by phylogenetically diverse Ampelomyces strains using digital microscopic technologies. The developed model system is useful for future biocontrol and ecological studies on Ampelomyces mycoparasites.
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Affiliation(s)
- Márk Z. Németh
- Centre for Agricultural Research, Plant Protection Institute, Eötvös Loránd Research Network, Budapest, Hungary
| | - Yuusaku Mizuno
- Laboratory of Phytoprotection, Science and Technology, Faculty of Agriculture, Kindai University, Nara, Japan
| | - Hiroki Kobayashi
- Laboratory of Phytoprotection, Science and Technology, Faculty of Agriculture, Kindai University, Nara, Japan
| | - Diána Seress
- Centre for Agricultural Research, Plant Protection Institute, Eötvös Loránd Research Network, Budapest, Hungary
| | - Naruki Shishido
- Laboratory of Phytoprotection, Science and Technology, Faculty of Agriculture, Kindai University, Nara, Japan
| | - Yutaka Kimura
- Laboratory of Phytoprotection, Science and Technology, Faculty of Agriculture, Kindai University, Nara, Japan
| | | | - Tomoko Suzuki
- Department of Chemical Biological Sciences, Faculty of Science, Japan Women’s University, Tokyo, Japan
| | - Yoshihiro Takikawa
- Plant Center, Institute of Advanced Technology, Kindai University, Wakayama, Japan
| | - Koji Kakutani
- Pharmaceutical Research and Technology Institute, Kindai University, Osaka, Japan
| | - Yoshinori Matsuda
- Laboratory of Phytoprotection, Science and Technology, Faculty of Agriculture, Kindai University, Nara, Japan
| | - Levente Kiss
- Centre for Agricultural Research, Plant Protection Institute, Eötvös Loránd Research Network, Budapest, Hungary
- Centre for Crop Health, University of Southern Queensland, Toowoomba, Australia
- * E-mail: (TN); (LK)
| | - Teruo Nonomura
- Laboratory of Phytoprotection, Science and Technology, Faculty of Agriculture, Kindai University, Nara, Japan
- Agricultural Technology and Innovation Research Institute, Kindai University, Nara, Japan
- * E-mail: (TN); (LK)
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18
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De Simone N, Capozzi V, Amodio ML, Colelli G, Spano G, Russo P. Microbial-based Biocontrol Solutions for Fruits and Vegetables: Recent Insight, Patents, and Innovative Trends. Recent Pat Food Nutr Agric 2021; 12:3-18. [PMID: 33550980 DOI: 10.2174/2212798412666210125141117] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Revised: 11/25/2020] [Accepted: 12/29/2020] [Indexed: 05/01/2023]
Abstract
BACKGROUND Fruits and vegetables are susceptible to colonisation by undesired microflora, which, in pre- and post-harvest conditions, negatively impact the quality of these products, leading to a reduction of yield, shelf-life, and marketability. In the few last years, the use of microbial Biological Control Agents (BCAs) has assumed international relevance in order to control harmful microorganisms, as a promising alternative to chemical interventions. OBJECTIVE The purpose of this review is to discuss the microbial-based solutions applicable for the biocontrol of the main microbial spoilers, phytopathogens, and human food-borne pathogens affecting fruits and vegetables during their production and storage. RESULTS A comprehensive overview of the scientific literature investigating the effectiveness of BCA-based products available on the market is provided, as well as of the most recent patents protecting biotechnological applications in this field. Innovative trends are discussed, with a particular focus on the integration of BCAs to minimise spoilage phenomena and microbiological risks adopting combined approaches. CONCLUSION This study underlines the growing interest about biocontrol strategies to counteract the growth of spoilage and/or pathogenic microorganisms indicating that in the next years a considerable increase of commercial products and patents will be developed worldwide to exploit innovative biotechnological solutions in the sector.
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Affiliation(s)
- Nicola De Simone
- Department of Agriculture, Food, Natural Resources and Engineering, University of Foggia, Via Napoli 25, Foggia 71122, Italy
| | - Vittorio Capozzi
- Institute of Sciences of Food Production, National Research Council of Italy (CNR), C/O CS-DAT, Via Michele Protano, Foggia 71121, Italy
| | - Maria Luisa Amodio
- Department of Agriculture, Food, Natural Resources and Engineering, University of Foggia, Via Napoli 25, Foggia 71122, Italy
| | - Giancarlo Colelli
- Department of Agriculture, Food, Natural Resources and Engineering, University of Foggia, Via Napoli 25, Foggia 71122, Italy
| | - Giuseppe Spano
- Department of Agriculture, Food, Natural Resources and Engineering, University of Foggia, Via Napoli 25, Foggia 71122, Italy
| | - Pasquale Russo
- Department of Agriculture, Food, Natural Resources and Engineering, University of Foggia, Via Napoli 25, Foggia 71122, Italy
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19
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Dwivedi SA, Tomer A. Application of Mycobiocontrol Agent in Biodergradation and Pest Management. Fungal Biol 2021. [DOI: 10.1007/978-3-030-54422-5_11] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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20
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Mahmoud GAE. Biotic Stress to Legumes: Fungal Diseases as Major Biotic Stress Factor. SUSTAINABLE AGRICULTURE REVIEWS 2021:181-212. [DOI: 10.1007/978-3-030-68828-8_7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
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21
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Bandamaravuri KB, Nayak AK, Bandamaravuri AS, Samad A. Simultaneous detection of downy mildew and powdery mildew pathogens on Cucumis sativus and other cucurbits using duplex-qPCR and HRM analysis. AMB Express 2020; 10:135. [PMID: 32748045 PMCID: PMC7399728 DOI: 10.1186/s13568-020-01071-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2020] [Accepted: 07/22/2020] [Indexed: 11/30/2022] Open
Abstract
Powdery mildew and downy mildew are two devastating diseases on cucumber and other cucurbit crops caused by Podosphaera xanthii and Pseudoperonospora cubensis, respectively. Identification and detection of these pathogens from field and plant material could be significant for the selection of resistant varieties and formulation of disease management strategies. In the present study, a duplex qPCR assay developed for simultaneous detection and quantification of both pathogens from different samples. Two sets of species-specific primers developed for the detection of P. xanthii and P. cubensis pathogens by targeting the internal transcribed spacer (ITS) region of the rDNA gene cluster. The specificity of designed primers was also evaluated against the different microbial, plant, soil, and environmental samples. Initially, the individual assays for P. cubensis and P. xanthii were validated using their corresponding species-specific primers, which amplified the prominent and distinctive products of ~ 705 bp and ~ 290 bp size, respectively. SYBR green-based duplex real-time PCR assay was developed to detect and quantify both mildew pathogens from different field samples. The species-specific oligonucleotide primer sets showed high specificity with melt curve peaks at 85.83 °C and 88.05 °C, for P. xanthii and P. cubensis, respectively. The relative quantification and lowest detection limit of qPCR assays using tenfold diluted plasmid (Csp1 and Csd1) DNA were estimated (0.1 pg/µl) through a standard curve. In this study, the species-specific PCR and qPCR assays in both simplex and duplex formats have been validated successfully. These assays could be useful for efficient detection and quantification of mildew pathogens from the cucumber and other cucurbit crops.
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22
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Morsy M, Cleckler B, Armuelles-Millican H. Fungal Endophytes Promote Tomato Growth and Enhance Drought and Salt Tolerance. PLANTS (BASEL, SWITZERLAND) 2020; 9:E877. [PMID: 32664321 PMCID: PMC7411952 DOI: 10.3390/plants9070877] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Revised: 07/03/2020] [Accepted: 07/08/2020] [Indexed: 11/23/2022]
Abstract
In a search for efficient fungal endophytes that can promote crop production and/or increase crop tolerance to abiotic stress, we isolated and tested various species harbored by wild plants. Sixty-seven endophytic fungal isolates were obtained from drought stressed, poor soil habitats, and inland high salt areas. We extensively tested the roles of Ampelomyces sp. and Penicillium sp. isolates in improving tomato growth and yield. Under greenhouse and field trails, Ampelomyces sp. and Penicillium sp. endophytes proved effective in conferring positive benefits to tomatoes placed under stress as well as under normal growing conditions. Ampelomyces sp. conferred tolerance to tomatoes placed under drought stress in addition to enhancing overall plant growth and fruit yield in comparison to non-symbiotic plants under drought stress. Penicillium sp. conferred tolerance to tomatoes placed under 300 mM salinity stress in addition to enhancing root biomass in comparison to non-symbiotic plants. Both endophytes proved efficient in enhancing plant growth, stress tolerance, recovery, and fruit yield under optimal experimental conditions in comparison to non-symbiotic plants. Field testing of tomato yield showed increased yield of symbiotic tomatoes compared to non-symbiotic ones. This data suggests that both Ampelomyces sp. and Penicillium sp. share a promising potential for improving future agricultural production, particularly with the projected changes in climate in the future.
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Affiliation(s)
- Mustafa Morsy
- Department of Biological and Environmental Sciences, University of West Alabama, Livingston, AL 35470, USA; (B.C.); (H.A.-M.)
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23
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Yadav V, Lekkala MMVSN, Surekha C, Neelapu NRR. Global Scenario of Advance Fungal Research in Crop Protection. Fungal Biol 2020. [DOI: 10.1007/978-3-030-48474-3_11] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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24
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Richter C, Yurkov AM, Boekhout T, Stadler M. Diversity of Tilletiopsis-Like Fungi in Exobasidiomycetes (Ustilaginomycotina) and Description of Six Novel Species. Front Microbiol 2019; 10:2544. [PMID: 31824440 PMCID: PMC6883903 DOI: 10.3389/fmicb.2019.02544] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Accepted: 10/21/2019] [Indexed: 11/13/2022] Open
Abstract
In 2006 several yeast-like fungi were isolated from apples that showed a postharvest disorder named “white haze.” These strains were morphologically and molecularly assigned to the genus Tilletiopsis. Following the recent reclassification of yeasts in Ustilaginomycotina and the genus Tilletiopsis in particular, species that caused “white haze” disorder were re-identified based on the phylogenetic analysis of five DNA-loci (ITS, LSU, SSU, RPB2, and TEF1) and analysis of D1/D2 domains of the 26S/28S rRNA (LSU). Six novel species belonging to three orders in the Exobasidiomycetes, namely Entyloma belangeri (holotype: CBS 111600; ex-type: DSM 29114) MB 823155, Entyloma davenportii (holotype: CBS 111604; ex-type: DSM 100135) MB 823154, Entyloma elstari (holotype: CBS 111593; ex-type: DSM 29113) MB 823153, Entyloma randwijkense (holotype: CBS 111606; ex-type: DSM 100136) MB 823156, Jamesdicksonia mali (holotype: CBS 111625; ex-type: DSM 29121) MB 823151 and Golubevia heteromorpha (holotype: CBS 111610; ex-type: DSM 100176) MB 823152 are proposed to accommodate these strains. In addition, sequences representing phylogenetically related but yet undescribed fungi were obtained from GenBank in order to show the diversity of Tilletiopsis-like yeast states in Exobasidiomycetes.
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Affiliation(s)
- Christian Richter
- Department of Microbial Drugs, Helmholtz Centre for Infection Research, Braunschweig, Germany
| | - Andrey M Yurkov
- German Collection of Microorganisms and Cell Cultures, Leibniz Institute DSMZ, Braunschweig, Germany
| | - Teun Boekhout
- Yeast Division, Westerdijk Fungal Biodiversity Institute, Utrecht, Netherlands.,Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, Netherlands
| | - Marc Stadler
- Department of Microbial Drugs, Helmholtz Centre for Infection Research, Braunschweig, Germany
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25
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Bajpai S, Shukla PS, Asiedu S, Pruski K, Prithiviraj B. A Biostimulant Preparation of Brown Seaweed Ascophyllum nodosum Suppresses Powdery Mildew of Strawberry. THE PLANT PATHOLOGY JOURNAL 2019; 35:406-416. [PMID: 31632216 PMCID: PMC6788409 DOI: 10.5423/ppj.oa.03.2019.0066] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Revised: 05/17/2019] [Accepted: 05/21/2019] [Indexed: 05/24/2023]
Abstract
Strawberry, an important fruit crop, is susceptible to a large number of pathogens that reduce fruit quality and productivity. In this study, the effect of a biostimulant prepared from Ascophyllum nodosum extract (ANE) (0.1%, 0.2%, and 0.3%) was evaluated on powdery mildew progression under greenhouse and field conditions. In the greenhouse, application of 0.2% ANE showed maximum reduction in powdery mildew progression as compared to the control. Forty-eight hour post-inoculation, foliar spray of 0.2% ANE reduced spore germination by 75%. Strawberry leaves sprayed with ANE showed higher total phenolic and flavonoid content in response to powdery mildew infection. Furthermore, application of ANE elicited defense response in strawberry plants by induction of defense-related enzymes, such as phenylalanine ammonia lyase, polyphenol oxidase, and peroxidase activity. In field conditions, foliar spray of 0.2% ANE showed a reduction of 37.2% of natural incidence of powdery mildew infection as compared to the control. ANE sprayed plant also reduces the severity of powdery mildew infection under natural conditions. These results indicate that application of ANE induces the strawberry plant's active defense against powdery mildew infection by induction of secondary metabolism and regulating the activities of defense-related enzymes.
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Affiliation(s)
- Sruti Bajpai
- Marine Bio-products Research Laboratory, Department of Plant, Food and Environmental Sciences, Dalhousie University, Truro, NS B2N 5E3,
Canada
| | - Pushp Sheel Shukla
- Marine Bio-products Research Laboratory, Department of Plant, Food and Environmental Sciences, Dalhousie University, Truro, NS B2N 5E3,
Canada
| | - Samuel Asiedu
- Department of Plant, Food and Environmental Sciences, Dalhousie University, Truro, NS B2N 5E3,
Canada
| | - Kris Pruski
- Department of Plant, Food and Environmental Sciences, Dalhousie University, Truro, NS B2N 5E3,
Canada
| | - Balakrishnan Prithiviraj
- Marine Bio-products Research Laboratory, Department of Plant, Food and Environmental Sciences, Dalhousie University, Truro, NS B2N 5E3,
Canada
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26
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Panstruga R, Kuhn H. Mutual interplay between phytopathogenic powdery mildew fungi and other microorganisms. MOLECULAR PLANT PATHOLOGY 2019; 20:463-470. [PMID: 30467940 PMCID: PMC6637862 DOI: 10.1111/mpp.12771] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Powdery mildew is a common and widespread plant disease of considerable agronomic relevance. It is caused by obligate biotrophic fungal pathogens which, in most cases, epiphytically colonize aboveground plant tissues. The disease has been typically studied as a binary interaction of the fungal pathogen with its plant hosts, neglecting, for the most part, the mutual interplay with the wealth of other microorganisms residing in the phyllo- and/or rhizosphere and roots. However, the establishment of powdery mildew disease can be impacted by the presence/absence of host-associated microbiota (epi- and endophytes) and, conversely, plant colonization by powdery mildew fungi might disturb indigenous microbial community structures. In addition, other (foliar) phytopathogens could interact with powdery mildews, and mycoparasites may affect the outcome of plant-powdery mildew interactions. In this review, we discuss the current knowledge regarding the intricate and multifaceted interplay of powdery mildew fungi, host plants and other microorganisms, and outline current gaps in our knowledge, thereby setting the basis for potential future research directions.
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Affiliation(s)
- Ralph Panstruga
- Unit of Plant Molecular Cell Biology, Institute for Biology IRWTH Aachen UniversityWorringerweg 1Aachen52056Germany
| | - Hannah Kuhn
- Unit of Plant Molecular Cell Biology, Institute for Biology IRWTH Aachen UniversityWorringerweg 1Aachen52056Germany
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28
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Zhu M, Riederer M, Hildebrandt U. UV-C irradiation compromises conidial germination, formation of appressoria, and induces transcription of three putative photolyase genes in the barley powdery mildew fungus, Blumeria graminis f. sp. hordei. Fungal Biol 2018; 123:218-230. [PMID: 30798877 DOI: 10.1016/j.funbio.2018.12.002] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Revised: 11/22/2018] [Accepted: 12/11/2018] [Indexed: 11/29/2022]
Abstract
UV-C irradiation is known to compromise germination of Blumeria graminis conidia and to reduce powdery mildew infestation. However, only scarce information is available on the effects of UV-C irradiation on B. graminis appressorium formation. Applying a Formvar® resin-based in vitro system allowed for analyzing B. graminis germination and appressorium formation in absence of plant defense. UV-C irradiation more strongly affected the differentiation of appressoria than conidial germination. In vivo and in vitro, a single dose of 100 J m-2 UV-C was sufficient to reduce germination to less than 20 % and decrease appressorium formation to values below 5 %. UV-C irradiation negatively affected pustule size and conidiation. White light-mediated photoreactivation was most effective immediately after UV-C irradiation, indicating that a prolonged phase of darkness after UV-C treatment increases the efficacy of B. graminis control. UV-C irradiation increased transcript levels of three putative B. graminis photolyase genes, while mere white light or blue light irradiation did not contribute to the transcriptional up-regulation. Thus, UV-C irradiation effectively controls B. graminis infestation and proliferation by restricting prepenetration processes. Nevertheless, photoreactivation plays an important role in UV-C-based powdery mildew control in crops and hence has to be considered for planning specific irradiation schedules.
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Affiliation(s)
- Mo Zhu
- University of Würzburg, Julius-von-Sachs-Institute for Biosciences, Chair of Botany II, Julius-von-Sachs-Platz 3, 97082 Würzburg, Germany.
| | - Markus Riederer
- University of Würzburg, Julius-von-Sachs-Institute for Biosciences, Chair of Botany II, Julius-von-Sachs-Platz 3, 97082 Würzburg, Germany.
| | - Ulrich Hildebrandt
- University of Würzburg, Julius-von-Sachs-Institute for Biosciences, Chair of Botany II, Julius-von-Sachs-Platz 3, 97082 Würzburg, Germany.
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29
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Pramudito TE, Agustina D, Nguyen TKN, Suwanto A. A Novel Variant of Narrow-Spectrum Antifungal Bacterial Lipopeptides That Strongly Inhibit Ganoderma boninense. Probiotics Antimicrob Proteins 2018; 10:110-117. [PMID: 29101528 DOI: 10.1007/s12602-017-9334-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Bacterial antifungal cyclic lipopeptides (ACLs) have become a promising alternative to synthetic fungicide to control pathogenic fungi. Bacillus sp. is known to produce three families of ACL, namely iturin, surfactin, and fengycin. In this paper, we characterized the ACLs produced by B. methylotrophicus HC51 (referred as HC51) mainly regarding its composition and effectivity against fungal plant pathogen. HC51 culture was tested against various pathogenic fungi and the ACLs were extracted and analyzed using liquid chromatography-electrospray ionization mass spectrometry. HC51 showed strong antifungal activity against the plant pathogens Ganoderma sp. and Fusarium sp. Cell-free methanol extract of HC51 contains iturin A and various variants of fengycin. C16 fengycin A was present in four fractions which indicates it as a major component of ACL from HC51. Five variants of fengycin were detected, four of which had been previously reported. We found a novel C17 fengycin F that is characterized by a substitution of L-ornithine into lysine. Considering that L-ornithine is an important building block of fengycin, this substitution suggests the possibility of an alternative pathway for fengycin biosynthesis.
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Affiliation(s)
- Theodorus Eko Pramudito
- Biotechnology Research and Development, PT Wilmar Benih Indonesia, Bekasi, Jawa Barat, 17530, Indonesia
| | - Delia Agustina
- Biotechnology Research and Development, PT Wilmar Benih Indonesia, Bekasi, Jawa Barat, 17530, Indonesia
| | | | - Antonius Suwanto
- Biotechnology Research and Development, PT Wilmar Benih Indonesia, Bekasi, Jawa Barat, 17530, Indonesia.
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Liyanage KK, Khan S, Brooks S, Mortimer PE, Karunarathna SC, Xu J, Hyde KD. Morpho-Molecular Characterization of Two Ampelomyces spp. (Pleosporales) Strains Mycoparasites of Powdery Mildew of Hevea brasiliensis. Front Microbiol 2018; 9:12. [PMID: 29403464 PMCID: PMC5780702 DOI: 10.3389/fmicb.2018.00012] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2017] [Accepted: 01/05/2018] [Indexed: 01/12/2023] Open
Abstract
Powdery mildew disease of rubber affects immature green leaves, buds, inflorescences, and other immature tissues of rubber trees, resulting in up to 45% losses in rubber latex yield worldwide. The disease is often controlled by dusting the diseased plants with powdered sulfur, which can have long-term negative effects on the environment. Therefore, it is necessary to search for alternative and environmentally friendly control methods for this disease. This study aimed to identify mycoparasites associated with rubber powdery mildew species, and characterize them on the basis of morpho-molecular characteristics and phylogenetic analyses of ITS rDNA regions. We observed that the Ampelomyces fungus parasitizes rubber powdery mildew, and eventually destroys it. Furthermore, on the basis of phylogenetic analyses and morphological characteristics we confirmed that the Ampelomyces mycoparasite isolated from rubber powdery mildew is closely related to other mycohost taxa in the Erysiphe genus. A total of 73 (71 retrieved from GenBank and two obtained from fresh collections of rubber powdery mildew fungi) Ampelomyces spp. were analyzed using ITS rDNA sequences and 153 polymorphic sites were identified through haplotypic analyses. A total of 28 haplotypes (H1-H28) were identified to have a complex network of mutation events. The results from phylogenetic tree constructed on the basis of maximum likelihood analyses, and the haplotype network tree revealed similar relationships of clustering pattern. This work presents the first report on morpho-molecular characterization of Ampelomyces species that are mycoparasites of powdery mildew of Hevea brasiliensis.
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Affiliation(s)
- Kapila K. Liyanage
- Center of Excellence in Fungal Research, and School of Science, Mae Fah Luang University, Chiang Rai, Thailand
- Center for Mountain Ecosystem Studies, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- World Agroforestry Centre, East and Central Asia, Kunming, China
- Rubber Research Institute of Sri Lanka, Agalawatta, Sri Lanka
| | - Sehroon Khan
- Center for Mountain Ecosystem Studies, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- World Agroforestry Centre, East and Central Asia, Kunming, China
| | - Siraprapa Brooks
- Center of Excellence in Fungal Research, and School of Science, Mae Fah Luang University, Chiang Rai, Thailand
| | - Peter E. Mortimer
- Center for Mountain Ecosystem Studies, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- World Agroforestry Centre, East and Central Asia, Kunming, China
| | - Samantha C. Karunarathna
- Center for Mountain Ecosystem Studies, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- World Agroforestry Centre, East and Central Asia, Kunming, China
| | - Jianchu Xu
- Center for Mountain Ecosystem Studies, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- World Agroforestry Centre, East and Central Asia, Kunming, China
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, and School of Science, Mae Fah Luang University, Chiang Rai, Thailand
- Center for Mountain Ecosystem Studies, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
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Kim YT, Park BK, Kim SE, Lee WJ, Moon JS, Cho MS, Park HY, Hwang I, Kim SU. Organization and characterization of genetic regions in Bacillus subtilis subsp. krictiensis ATCC55079 associated with the biosynthesis of iturin and surfactin compounds. PLoS One 2017; 12:e0188179. [PMID: 29267290 PMCID: PMC5739386 DOI: 10.1371/journal.pone.0188179] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2017] [Accepted: 11/02/2017] [Indexed: 11/19/2022] Open
Abstract
Bacillus subtilis subsp. krictiensis ATCC55079 produces the cyclic lipopeptide antibiotics iturin A-F as well as several surfactins. Here, we analyzed and characterized the biosynthetic genes associated with iturin and surfactin production in this strain. We aligned the sequences of each iturin and surfactin synthetase ORF obtained from a genomic library screen and next generation sequencing. The resulting 37,249-bp and 37,645-bp sequences associated with iturin and surfactin production, respectively, contained several ORFs that are predicted to encode proteins involved in iturin and surfactin biosynthesis. These ORFs showed higher sequence homologies with the respective iturin and surfactin synthetase genes of B. methylotrophicus CAU B946 than with those of B. subtilis RB14 and B. subtilis ATCC6633. Moreover, comparative analysis of the secondary metabolites produced by the wild-type and surfactin-less mutant (with a spectinomycin resistance cassette inserted into the srfAB gene within the putative surfactin gene region) strains demonstrated that the mutant strain showed significantly higher antifungal activity against Fusarium oxysporum than the wild-type strain. In addition, the wild-type strain-specific surfactin high performance liquid chromatography (HPLC) peaks were not observed in the surfactin-less mutant strain. In contrast, the iturin A peak detected by HPLC and liquid chromatography-mass spectrometry (LC/MS) in the surfactin-less mutant strain was 30% greater than that in the wild-type strain. These results suggested that the gene cluster we identified is involved in surfactin biosynthesis, and the biosynthetic pathways for iturin and surfactin in Bacillus strains producing both iturin and surfactin may utilize a common pathway.
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Affiliation(s)
- Young Tae Kim
- Division of Systems Biology and Bioengineering, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Byung Keun Park
- Division of Systems Biology and Bioengineering, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Sung Eun Kim
- Division of Systems Biology and Bioengineering, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Won Jung Lee
- Division of Systems Biology and Bioengineering, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Jae Sun Moon
- Division of Systems Biology and Bioengineering, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | | | - Ho-Yong Park
- Division of Systems Biology and Bioengineering, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Ingyu Hwang
- Department of Agricultural Biotechnology, Seoul National University, Seoul, Republic of Korea
| | - Sung Uk Kim
- Division of Systems Biology and Bioengineering, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
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Zahn G, Amend AS. Foliar microbiome transplants confer disease resistance in a critically-endangered plant. PeerJ 2017; 5:e4020. [PMID: 29134155 PMCID: PMC5683046 DOI: 10.7717/peerj.4020] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2017] [Accepted: 10/20/2017] [Indexed: 02/06/2023] Open
Abstract
There has been very little effort to incorporate foliar microbiomes into plant conservation efforts even though foliar endophytes are critically important to the fitness and function of hosts. Many critically endangered plants that have been extirpated from the wild are dependent on regular fungicidal applications in greenhouses that cannot be maintained for remote out-planted populations, which quickly perish. These fungicides negatively impact potentially beneficial fungal symbionts, which may reduce plant defenses to pathogens once fungicide treatments are stopped. Using the host/parasite system of Phyllostegia kaalaensis and Neoerysiphe galeopsidis, we conducted experiments to test total foliar microbiome transplants from healthy wild relatives onto fungicide-dependent endangered plants in an attempt to mitigate disease and reduce dependency on fungicides. Plants were treated with total microbiome transplants or cultured subsets of this community and monitored for disease severity. High-throughput DNA screening of fungal ITS1 rDNA was used to track the leaf-associated fungal communities and evaluate the effectiveness of transplantation methods. Individuals receiving traditionally isolated fungal treatments showed no improvement, but those receiving applications of a simple leaf slurry containing an uncultured fungal community showed significant disease reduction, to which we partially attribute an increase in the mycoparasitic Pseudozyma aphidis. These results were replicated in two independent experimental rounds. Treated plants have since been moved to a native habitat and, as of this writing, remain disease-free. Our results demonstrate the effectiveness of a simple low-tech method for transferring beneficial microbes from healthy wild plants to greenhouse-raised plants with reduced symbiotic microbiota. This technique was effective at reducing disease, and in conferring increased survival to an out-planted population of critically endangered plants. It was not effective in a closely related plant. Plant conservation efforts should strive to include foliar microbes as part of comprehensive management plans.
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Affiliation(s)
- Geoffrey Zahn
- Biology Department, Utah Valley University, Orem, UT, United States of America
| | - Anthony S. Amend
- Botany Department, University of Hawaii at Manoa, Honolulu, HI, United States of America
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Prior R, Mittelbach M, Begerow D. Impact of three different fungicides on fungal epi- and endophytic communities of common bean (Phaseolus vulgaris) and broad bean (Vicia faba). JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART. B, PESTICIDES, FOOD CONTAMINANTS, AND AGRICULTURAL WASTES 2017; 52:376-386. [PMID: 28277075 DOI: 10.1080/03601234.2017.1292093] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
In this study, the impacts of three different fungicides to fungal phyllosphere communities on broad bean (Vicia faba, Fabaceae) and common bean (Phaseolus vulgaris, Fabaceae) were analyzed. The fungicides included copper, sulfur, and azoxystrobin. The plants were sowed, grown, and treated under conditions occurring in conventional and organic farming. A culture-based approach was used to identify changes in the phyllosphere fungal community after the treatment. Different effects on species richness and growth index of the epiphytic and endophytic communities for common bean and broad bean could be shown. Treatments with sulfur showed the weakest effect, followed by those based on copper and the systemic azoxystrobin, which showed the strongest effect especially on endophytic communities. The epiphytic fungal community took five weeks to recover after treatment with azoxystrobin. However, the effect of azoxystrobin on the endophytic community lasted more than five weeks. Finally, the data suggest that the surface structure of the host leaves have a huge impact on the mode of action that the fungicides exert.
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Affiliation(s)
- René Prior
- a Ruhr-Universität Bochum , Bochum , Germany
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Torres DE, Rojas-Martínez RI, Zavaleta-Mejía E, Guevara-Fefer P, Márquez-Guzmán GJ, Pérez-Martínez C. Cladosporium cladosporioides and Cladosporium pseudocladosporioides as potential new fungal antagonists of Puccinia horiana Henn., the causal agent of chrysanthemum white rust. PLoS One 2017; 12:e0170782. [PMID: 28141830 PMCID: PMC5283677 DOI: 10.1371/journal.pone.0170782] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2015] [Accepted: 01/11/2017] [Indexed: 11/19/2022] Open
Abstract
Puccinia horiana Hennings, the causal agent of chrysanthemum white rust, is a worldwide quarantine organism and one of the most important fungal pathogens of Chrysanthemum × morifolium cultivars, which are used for cut flowers and as potted plants in commercial production regions of the world. It was previously reported to be controlled by Lecanicillium lecanii, Cladosporium sphaerospermum, C. uredinicola and Aphanocladium album, due to their antagonistic and hyperparasitic effects. We report novel antagonist species on Puccinia horiana. Fungi isolated from rust pustules in a commercial greenhouse from Villa Guerrero, México, were identified as Cladosporium cladosporioides and Cladosporium pseudocladosporioides based upon molecular analysis and morphological characters. The antagonism of C. cladosporioides and C. pseudocladosporioides on chrysanthemum white rust was studied using light and electron microscopy in vitro at the host/parasite interface. Cladosporium cladosporioides and C. pseudocladosporioides grew towards the white rust teliospores and colonized the sporogenous cells, but no direct penetration of teliospores was observed; however, the structure and cytoplasm of teliospores were altered. The two Cladosporium spp. were able to grow on media containing laminarin, but not when chitin was used as the sole carbon source; these results suggest that they are able to produce glucanases. Results from the study indicate that both Cladosporium species had potential as biological control agents of chrysanthemum white rust.
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Affiliation(s)
| | | | - Emma Zavaleta-Mejía
- Instituto de Fitosanidad, Colegio de Postgraduados, Montecillo, Texcoco, México
| | - Patricia Guevara-Fefer
- Departamento de Ecología y Recursos Naturales, Facultad de Ciencias, Universidad Nacional Autónoma de México, Ciudad de México, Distrito Federal, México
| | - G. Judith Márquez-Guzmán
- Departamento de Biología Comparada, Facultad de Ciencias, Universidad Nacional Autónoma de México, Ciudad de México, Distrito Federal, México
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Lee G, Lee SH, Kim KM, Ryu CM. Foliar application of the leaf-colonizing yeast Pseudozyma churashimaensis elicits systemic defense of pepper against bacterial and viral pathogens. Sci Rep 2017; 7:39432. [PMID: 28071648 PMCID: PMC5223187 DOI: 10.1038/srep39432] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2016] [Accepted: 11/22/2016] [Indexed: 12/21/2022] Open
Abstract
Yeast associates with many plant parts including the phyllosphere, where it is subject to harsh environmental conditions. Few studies have reported on biological control of foliar pathogens by yeast. Here, we newly isolated leaf-colonizing yeasts from leaves of field-grown pepper plants in a major pepper production area of South Korea. The yeast was isolated using semi-selective medium supplemented with rifampicin to inhibit bacterial growth and its disease control capacity against Xanthomonas axonopodis infection of pepper plants in the greenhouse was evaluated. Of 838 isolated yeasts, foliar spray of Pseudozyma churashimaensis strain RGJ1 at 108 cfu/mL conferred significant protection against X. axonopodis and unexpectedly against Cucumber mosaic virus, Pepper mottle virus, Pepper mild mottle virus, and Broad bean wilt virus under field conditions. Direct antagonism between strain RGJ1 and X. axonopodis was not detected from co-culture assays, suggesting that disease is suppressed via induced resistance. Additional molecular analysis of the induced resistance marker genes Capsicum annuum Pathogenesis-Related (CaPR) 4 and CaPR5 indicated that strain RGJ1 elicited plant defense priming. To our knowledge, this study is the first report of plant protection against bacterial and viral pathogens mediated by a leaf-colonizing yeast and has potential for effective disease management in the field.
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Affiliation(s)
- Gahyung Lee
- Molecular Phytobacteriology Laboratory, Superbacteria Research Center, KRIBB, Daejeon 305-806, South Korea
| | - Sang-Heon Lee
- Microbial Resource Center, KRIBB, Jeongeup 56212, South Korea
- Department of Bioinformatics, University of Science and Technology (UST), Daejeon 34141, South Korea
| | - Kyung Mo Kim
- Microbial Resource Center, KRIBB, Jeongeup 56212, South Korea
- Department of Bioinformatics, University of Science and Technology (UST), Daejeon 34141, South Korea
| | - Choong-Min Ryu
- Molecular Phytobacteriology Laboratory, Superbacteria Research Center, KRIBB, Daejeon 305-806, South Korea
- Biosystems and Bioengineering Program, School of Science, University of Science and Technology (UST), Daejeon 34113, South Korea
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Jakuschkin B, Fievet V, Schwaller L, Fort T, Robin C, Vacher C. Deciphering the Pathobiome: Intra- and Interkingdom Interactions Involving the Pathogen Erysiphe alphitoides. MICROBIAL ECOLOGY 2016; 72:870-880. [PMID: 27147439 DOI: 10.1007/s00248-016-0777-x] [Citation(s) in RCA: 54] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2015] [Accepted: 04/21/2016] [Indexed: 05/13/2023]
Abstract
Plant-inhabiting microorganisms interact directly with each other, forming complex microbial interaction networks. These interactions can either prevent or facilitate the establishment of new microbial species, such as a pathogen infecting the plant. Here, our aim was to identify the most likely interactions between Erysiphe alphitoides, the causal agent of oak powdery mildew, and other foliar microorganisms of pedunculate oak (Quercus robur L.). We combined metabarcoding techniques and a Bayesian method of network inference to decipher these interactions. Our results indicate that infection with E. alphitoides is accompanied by significant changes in the composition of the foliar fungal and bacterial communities. They also highlight 13 fungal operational taxonomic units (OTUs) and 13 bacterial OTUs likely to interact directly with E. alphitoides. Half of these OTUs, including the fungal endophytes Mycosphaerella punctiformis and Monochaetia kansensis, could be antagonists of E. alphitoides according to the inferred microbial network. Further studies will be required to validate these potential interactions experimentally. Overall, we showed that a combination of metabarcoding and network inference, by highlighting potential antagonists of pathogen species, could potentially improve the biological control of plant diseases.
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Affiliation(s)
- Boris Jakuschkin
- BIOGECO, INRA, University of Bordeaux, F-33615, Bordeaux, Pessac, France
| | - Virgil Fievet
- BIOGECO, INRA, University of Bordeaux, F-33615, Bordeaux, Pessac, France
| | - Loïc Schwaller
- AgroParisTech, UMR 518 MIA, F-75005, Paris, France
- INRA, UMR 518 MIA, F-75005, Paris, France
| | - Thomas Fort
- BIOGECO, INRA, University of Bordeaux, F-33615, Bordeaux, Pessac, France
| | - Cécile Robin
- BIOGECO, INRA, University of Bordeaux, F-33615, Bordeaux, Pessac, France
| | - Corinne Vacher
- BIOGECO, INRA, University of Bordeaux, F-33615, Bordeaux, Pessac, France.
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Suthaparan A, Solhaug KA, Bjugstad N, Gislerød HR, Gadoury DM, Stensvand A. Suppression of Powdery Mildews by UV-B: Application Frequency and Timing, Dose, Reflectance, and Automation. PLANT DISEASE 2016; 100:1643-1650. [PMID: 30686239 DOI: 10.1094/pdis-12-15-1440-re] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Disease-suppressive effects of nighttime applications of ultraviolet-B (UV-B) were investigated at two irradiance levels (1.6 or 0.8 W/m2) in strawberry and rosemary plants inoculated with Podosphaera aphanis or Golovinomyces biocellatus, respectively. Plants were exposed to each irradiance level every third night for either 9 or 18 min, every night for either 3 or 6 min, or three times every night for either 1 or 2 min. Thus, over time, all plants received the same cumulative dose of UV-B, and severity of powdery mildew was reduced by 90 to 99% compared with untreated controls in both crops. Use of polished aluminum lamp reflectors and UV-B reflective surfaces on greenhouse benches significantly increased treatment efficacy. An automated apparatus consisting of an adjustable boom with directed airflow was used to move UV-B lamps over greenhouse benches at 25 or 50 cm/min. Directed airflow moved leaves on the subtending plants to better expose upper and lower surfaces to UV-B but directed airflow actually decreased the efficacy of UV-B treatments, possibly by dispersing conidia from lesions before they were exposed to a lethal dose of UV-B. Results indicate broad applicability of nighttime applications of UV-B to suppress powdery mildews, and that cumulative UV-B dose is an overriding factor determining efficacy. Finally, enhanced suppression on shaded or obscured tissues is more likely to be affected by reflective bench surfaces than through attempts to physically manipulate the foliage.
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Affiliation(s)
| | - K A Solhaug
- Department of Ecology and Natural Resource Management
| | - N Bjugstad
- Department of Mathematics and Technology
| | - H R Gislerød
- Department of Plant Sciences, Norwegian University of Life Sciences, 1432 Ås, Norway
| | - D M Gadoury
- Department of Plant Pathology and Plant-Microbe Biology, Cornell University, New York State Agricultural Experiment Station, Geneva, NY 14456
| | - A Stensvand
- Norwegian Institute of Bioeconomy Research, P.O. Box 115, 1431 Ås, Norway
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Zhong X, Li SS, Peng QY, Zhang JS, Kan XT, Zhang GR, Liu X. A Polycephalomyces hyperparasite of Ophiocordyceps sinensis leads to shortened duration of production and reduced numbers of host ascospores. FUNGAL ECOL 2016. [DOI: 10.1016/j.funeco.2016.03.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Ford SA, King KC. Harnessing the Power of Defensive Microbes: Evolutionary Implications in Nature and Disease Control. PLoS Pathog 2016; 12:e1005465. [PMID: 27058881 PMCID: PMC4826280 DOI: 10.1371/journal.ppat.1005465] [Citation(s) in RCA: 58] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
Affiliation(s)
- Suzanne A. Ford
- Department of Zoology, University of Oxford, Oxford, United Kingdom
- * E-mail: (SAF); (KCK)
| | - Kayla C. King
- Department of Zoology, University of Oxford, Oxford, United Kingdom
- * E-mail: (SAF); (KCK)
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Busby PE, Ridout M, Newcombe G. Fungal endophytes: modifiers of plant disease. PLANT MOLECULAR BIOLOGY 2016; 90:645-55. [PMID: 26646287 DOI: 10.1007/s11103-015-0412-0] [Citation(s) in RCA: 171] [Impact Index Per Article: 21.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2015] [Accepted: 11/24/2015] [Indexed: 05/19/2023]
Abstract
Many recent studies have demonstrated that non-pathogenic fungi within plant microbiomes, i.e., endophytes ("endo" = within, "phyte" = plant), can significantly modify the expression of host plant disease. The rapid pace of advancement in endophyte ecology warrants a pause to synthesize our understanding of endophyte disease modification and to discuss future research directions. We reviewed recent literature on fungal endophyte disease modification, and here report on several emergent themes: (1) Fungal endophyte effects on plant disease span the full spectrum from pathogen antagonism to pathogen facilitation, with pathogen antagonism most commonly reported. (2) Agricultural plant pathosystems are the focus of research on endophyte disease modification. (3) A taxonomically diverse group of fungal endophytes can influence plant disease severity. And (4) Fungal endophyte effects on plant disease severity are context-dependent. Our review highlights the importance of fungal endophytes for plant disease across a broad range of plant pathosystems, yet simultaneously reveals that complexity within plant microbiomes presents a significant challenge to disentangling the biotic environmental factors affecting plant disease severity. Manipulative studies integrating eco-evolutionary approaches with emerging molecular tools will be poised to elucidate the functional importance of endophytes in natural plant pathosystems that are fundamental to biodiversity and conservation.
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Affiliation(s)
- Posy E Busby
- Department of Biology, Duke University, Durham, NC, 287708, USA.
- Department of Forest, Rangelands and Fire Sciences, University of Idaho, Moscow, ID, 83844-1133, USA.
| | - Mary Ridout
- Department of Forest, Rangelands and Fire Sciences, University of Idaho, Moscow, ID, 83844-1133, USA
| | - George Newcombe
- Department of Forest, Rangelands and Fire Sciences, University of Idaho, Moscow, ID, 83844-1133, USA
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Gafni A, Calderon CE, Harris R, Buxdorf K, Dafa-Berger A, Zeilinger-Reichert E, Levy M. Biological control of the cucurbit powdery mildew pathogen Podosphaera xanthii by means of the epiphytic fungus Pseudozyma aphidis and parasitism as a mode of action. FRONTIERS IN PLANT SCIENCE 2015; 6:132. [PMID: 25814995 PMCID: PMC4356082 DOI: 10.3389/fpls.2015.00132] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2014] [Accepted: 02/18/2015] [Indexed: 05/13/2023]
Abstract
Epiphytic yeasts, which colonize plant surfaces, may possess activity that can be harnessed to help plants defend themselves against various pathogens. Due to their unique characteristics, epiphytic yeasts belonging to the genus Pseudozyma hold great potential for use as biocontrol agents. We identified a unique, biologically active isolate of the epiphytic yeast Pseudozyma aphidis that is capable of inhibiting Botrytis cinerea via a dual mode of action, namely induced resistance and antibiosis. Here, we show that strain L12 of P. aphidis can reduce the severity of powdery mildew caused by Podosphaera xanthii on cucumber plants with an efficacy of 75%. Confocal and scanning electron microscopy analyses demonstrated P. aphidis proliferation on infected tissue and its production of long hyphae that parasitize the powdery mildew hyphae and spores as an ectoparasite. We also show that crude extract of P. aphidis metabolites can inhibit P. xanthii spore germination in planta. Our results suggest that in addition to its antibiosis as mode of action, P. aphidis may also act as an ectoparasite on P. xanthii. These results indicate that P. aphidis strain L12 has the potential to control powdery mildew.
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Affiliation(s)
- Aviva Gafni
- Plant Pathology and Microbiology, Hebrew University of JerusalemJerusalem, Israel
| | - Claudia E. Calderon
- Plant Pathology and Microbiology, Hebrew University of JerusalemJerusalem, Israel
| | - Raviv Harris
- Plant Pathology and Microbiology, Hebrew University of JerusalemJerusalem, Israel
| | - Kobi Buxdorf
- Plant Pathology and Microbiology, Hebrew University of JerusalemJerusalem, Israel
| | - Avis Dafa-Berger
- Plant Pathology and Microbiology, Hebrew University of JerusalemJerusalem, Israel
| | - Einat Zeilinger-Reichert
- The Interdepartmental Equipment Facility, The Robert H. Smith Faculty of Agriculture, Food and Environment, Hebrew University of JerusalemJerusalem, Israel
| | - Maggie Levy
- Plant Pathology and Microbiology, Hebrew University of JerusalemJerusalem, Israel
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Endophytic Bacillus subtilis strain E1R-J is a promising biocontrol agent for wheat powdery mildew. BIOMED RESEARCH INTERNATIONAL 2015; 2015:462645. [PMID: 25759819 PMCID: PMC4339710 DOI: 10.1155/2015/462645] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/15/2014] [Accepted: 11/27/2014] [Indexed: 11/30/2022]
Abstract
In this study, the biocontrol efficacies of 14 endophytic bacterial strains were tested against Blumeria graminis f. sp. tritici (Bgt) in pot experiments under greenhouse conditions. Bacillus subtilis strain E1R-j significantly reduced disease index and exhibited the best control (90.97%). When different formulations of E1R-j were sprayed 24 h before Bgt inoculation, fermentation liquid without bacterial cell and crude protein suspension displayed the similar effects; and they reduced disease index more than bacterial cell suspension (109 cfu mL−1) and fermentation liquid without protein. The control effects were not significantly different between 1011 and 109 cfu mL−1 of bacterial cell suspension but were higher than 107 cfu mL−1. Further observations showed that conidial germination and appressorial formation of Bgt were retarded by spraying E1R-j 24 h before Bgt inoculation. Compared with the water check, conidial germination and appressorial formation were decreased by 43.3% and 42.7%, respectively. In the treatment with E1R-j, the number of houstoria significantly reduced and the speed of mycelial extension was slowed down in the wheat leaves. Scanning electron microscopy observation revealed that E1R-j significantly suppressed the conidial germination and caused rupture and deformation of germ tubes. On the surface of wheat leaves, mycelia and conidiophores became shrinking.
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Mehta CM, Palni U, Franke-Whittle IH, Sharma AK. Compost: its role, mechanism and impact on reducing soil-borne plant diseases. WASTE MANAGEMENT (NEW YORK, N.Y.) 2014; 34:607-22. [PMID: 24373678 DOI: 10.1016/j.wasman.2013.11.012] [Citation(s) in RCA: 91] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2013] [Revised: 11/28/2013] [Accepted: 11/28/2013] [Indexed: 05/14/2023]
Abstract
Soil-borne plant pathogens are responsible for causing many crop plant diseases, resulting in significant economic losses. Compost application to agricultural fields is an excellent natural approach, which can be taken to fight against plant pathogens. The application of organic waste products is also an environmentally friendly alternative to chemical use, which unfortunately is the most common approach in agriculture today. This review analyses pioneering and recent compost research, and also the mechanisms and mode of action of compost microbial communities for reducing the activity of plant pathogens in agricultural crops. In addition, an approach for improving the quality of composts through the microbial communities already present in the compost is presented. Future agricultural practices will almost definitely require integrated research strategies to help combat plant diseases.
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Affiliation(s)
- C M Mehta
- Department of Biological Sciences, College of Basic Science and Humanities, G. B. P. U. A. & T. Pantnagar, U.S. Nagar, Uttarakhand, India; Department of Botany, D.S.B. Campus, Kumaun University Nainital, Uttarakhand, India
| | - Uma Palni
- Department of Botany, D.S.B. Campus, Kumaun University Nainital, Uttarakhand, India
| | - I H Franke-Whittle
- Leopold-Franzens University, Institute of Microbiology, Technikerstraße 25, 6020 Innsbruck, Austria
| | - A K Sharma
- Department of Biological Sciences, College of Basic Science and Humanities, G. B. P. U. A. & T. Pantnagar, U.S. Nagar, Uttarakhand, India.
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Naznin HA, Kiyohara D, Kimura M, Miyazawa M, Shimizu M, Hyakumachi M. Systemic resistance induced by volatile organic compounds emitted by plant growth-promoting fungi in Arabidopsis thaliana. PLoS One 2014; 9:e86882. [PMID: 24475190 PMCID: PMC3903595 DOI: 10.1371/journal.pone.0086882] [Citation(s) in RCA: 89] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2013] [Accepted: 12/18/2013] [Indexed: 11/19/2022] Open
Abstract
Volatile organic compounds (VOC) were extracted and identified from plant growth-promoting fungi (PGPF), Phoma sp., Cladosporium sp. and Ampelomyces sp., using gas chromatography-mass spectrometry (GC-MS). Among the three VOC extracted, two VOC blends (emitted from Ampelomyces sp. and Cladosporium sp.) significantly reduced disease severity in Arabidopsis plants against Pseudomonas syringae pv. tomato DC3000 (Pst). Subsequently, m-cresol and methyl benzoate (MeBA) were identified as major active volatile compounds from Ampelomyces sp. and Cladosporium sp., respectively, and found to elicit induced systemic resistance (ISR) against the pathogen. Molecular signaling for disease suppression by the VOC were investigated by treating different mutants and transgenic Arabidopsis plants impaired in salicylic acid (SA) or Jasmonic acid (JA)/ethylene (ET) signaling pathways with m-cresol and MeBA followed by challenge inoculation with Pst. Results show that the level of protection was significantly lower when JA/ET-impaired mutants were treated with MeBA, and in SA-, and JA/ET-disrupted mutants after m-cresol treatment, indicating the involvement of these signal transduction pathways in the ISR primed by the volatiles. Analysis of defense-related genes by real-time qRT-PCR showed that both the SA-and JA-signaling pathways combine in the m-cresol signaling of ISR, whereas MeBA is mainly involved in the JA-signaling pathway with partial recruitment of SA-signals. The ET-signaling pathway was not employed in ISR by the volatiles. Therefore, this study identified two novel volatile components capable of eliciting ISR that may be promising candidates in biological control strategy to protect plants from diseases.
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Affiliation(s)
- Hushna Ara Naznin
- The United Graduate School of Agricultural Sciences, Gifu University, Gifu City, Japan
| | - Daigo Kiyohara
- Laboratory of Plant Pathology, Faculty of Applied Biological Sciences, Gifu University, Gifu City, Japan
| | - Minako Kimura
- Laboratory of Plant Pathology, Faculty of Applied Biological Sciences, Gifu University, Gifu City, Japan
| | - Mitsuo Miyazawa
- Department of Applied Chemistry, Faculty of Science and Engineering, Kinki University, Higashiosaka-shi, Osaka, Japan
| | - Masafumi Shimizu
- Laboratory of Plant Pathology, Faculty of Applied Biological Sciences, Gifu University, Gifu City, Japan
| | - Mitsuro Hyakumachi
- Laboratory of Plant Pathology, Faculty of Applied Biological Sciences, Gifu University, Gifu City, Japan
- * E-mail:
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Kim YS, Song JG, Lee IK, Yeo WH, Yun BS. Bacillus sp. BS061 Suppresses Gray Mold and Powdery Mildew through the Secretion of Different Bioactive Substances. MYCOBIOLOGY 2013; 41:164-6. [PMID: 24198673 PMCID: PMC3817233 DOI: 10.5941/myco.2013.41.3.164] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2013] [Accepted: 08/27/2013] [Indexed: 05/27/2023]
Abstract
A Bacillus sp. BS061 significantly reduced disease incidence of gray mold and powdery mildew. To identify the active principle, the culture filtrate was partitioned between butanol and water. The antifungal activity against B. cinerea was evident in the butanol-soluble portion, and active substances were identified as cyclic lipopeptides, iturin A series, by nuclear magnetic resonance spectrometry (NMR) and mass analysis. Interestingly, antifungal activity against powdery mildew was observed in the water-soluble portion, suggesting that cyclic lipopeptides have no responsibility to suppress powdery mildew. This finding reveals that biocontrol agents of Bacillus origin suppress gray mold and powdery mildew through the secretion of different bioactive substances.
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Affiliation(s)
- Young-Sook Kim
- Division of Biotechnology and Advanced Institute of Environment and Bioscience, College of Environmental and Bioresource Sciences, Chonbuk National University, Iksan 570-752, Korea
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Kim YS, Song JG, Lee IK, Yeo WH, Yun BS. Bacillus sp. BS061 Suppresses Powdery Mildew and Gray Mold. MYCOBIOLOGY 2013; 41:108-11. [PMID: 23874134 PMCID: PMC3714439 DOI: 10.5941/myco.2013.41.2.108] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2013] [Accepted: 05/21/2013] [Indexed: 05/12/2023]
Abstract
The use of a microorganism, or its secretions, to prevent plant disease offers an attractive alternative or supplement to synthetic fungicides for the management of plant disease without the negative effects of chemical control mechanisms. During a screening for microorganisms with the potential to be used as microbial fungicides, Bacillus sp. BS061 was isolated from a plant leaf. The strain BS061 potently inhibited the mycelial growth of Botrytis cinerea, and significantly reduced disease incidence of powdery mildew in cucumber and strawberry. We also found that the culture filtrate of BS061 inhibited the mycelial growth of various plant pathogens.
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Affiliation(s)
- Young-Sook Kim
- Division of Biotechnology, College of Environmental and Bioresource Sciences, Chonbuk National University, Iksan 570-752, Korea
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de Souza Leite T, Cnossen-Fassoni A, Pereira OL, Mizubuti ESG, de Araújo EF, de Queiroz MV. Novel and highly diverse fungal endophytes in soybean revealed by the consortium of two different techniques. J Microbiol 2013; 51:56-69. [PMID: 23456713 DOI: 10.1007/s12275-013-2356-x] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2012] [Accepted: 09/28/2012] [Indexed: 12/17/2022]
Abstract
Fungal endophytes were isolated from the leaves of soybean cultivars in Brazil using two different isolation techniques - fragment plating and the innovative dilution-to-extinction culturing - to increase the species richness, frequency of isolates and diversity. A total of 241 morphospecies were obtained corresponding to 62 taxa that were identified by analysis of the internal transcribed spacer (ITS) of the ribosomal DNA (rDNA). The Phylum Ascomycota predominated, representing 99% and 95.2% of isolates in the Monsoy and Conquista cultivars, respectively, whereas the Phylum Basidiomycota represented 1% and 4.8% of isolates, respectively. The genera Ampelomyces, Annulohypoxylon, Guignardia, Leptospora, Magnaporthe, Ophiognomonia, Paraconiothyrium, Phaeosphaeriopsis, Rhodotorula, Sporobolomyces, and Xylaria for the first time were isolated from soybean; this suggests that soybean harbours novel and highly diverse fungi. The yeasts genera Rhodotorula and Sporobolomyces (subphylum Pucciniomycotina) represent the Phylum Basidiomycota. The species richness was greater when both isolation techniques were used. The diversity of fungal endophytes was similar in both cultivars when the same isolation technique was used except for Hill's index, N1. The use of ITS region sequences allowed the isolates to be grouped according to Order, Class and Phylum. Ampelomyces, Chaetomium, and Phoma glomerata are endophytic species that may play potential roles in the biological control of soybean pathogens. This study is one of the first to apply extinction-culturing to isolate fungal endophytes in plant leaves, thus contributing to the development and improvement of this technique for future studies.
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Affiliation(s)
- Tiago de Souza Leite
- Department of Microbiology/Institute of Microbiology Applied to Agriculture and Livestock Raising (BIOAGRO), Laboratory of Microorganism Molecular Genetics, Vicosa, Brazil
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Characterization, cloning, and heterologous expression of a subtilisin-like serine protease gene VlPr1 from Verticillium lecanii. J Microbiol 2012; 50:939-46. [PMID: 23274980 DOI: 10.1007/s12275-012-2199-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2012] [Accepted: 07/14/2012] [Indexed: 10/27/2022]
Abstract
The entomopathogenic fungus Verticillium lecanii is a well-known biocontrol agent. V. lecanii produces subtilisin-like serine protease (Pr1), which is important in the biological control activity of some insect pests by degrading insect cuticles. In this study, a subtilisin-like serine protease gene VlPr1 was cloned from the fungus and the VlPr1 protein was expressed in Escherichia coli. The VlPr1 gene contains an open reading frame (ORF) interrupted by three short introns, and encodes a protein of 379 amino acids. Protein sequence analysis revealed high homology with subtilisin serine proteases. The molecular mass of the protease was 38 kDa, and the serine protease exhibited its maximal activity at 40°C and pH 9.0. Protease activity was also affected by Mg(2+) and Ca(2+) concentration. The protease showed inhibitory activity against several plant pathogens, especially towards Fusarium moniliforme.
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