A novel methylation derivatization method for δ(18)O analysis of individual carbohydrates by gas chromatography/pyrolysis-isotope ratio mass spectrometry

Quantifying isotope parameters associated with carbonyl-water oxygen exchange during sucrose translocation in tree phloem

Stable oxygen isotope ratio of tree-ring α-cellulose (δ18Ocel) yields valuable information on many aspects of tree-climate interactions. However, our current understanding of the mechanistic controls on δ18Ocel is incomplete, with a knowledge gap existent regarding the fractionation effect characterizing carbonyl-water oxygen exchange during sucrose translocation from leaf to phloem. To address this insufficiency, we set up an experimental system integrating a vapor 18O-labeling feature to manipulate leaf-level isotopic signatures in tree saplings enclosed within whole-canopy gas-exchange cuvettes. We applied this experimental system to three different tree species to determine their respective relationships between 18O enrichment of sucrose in leaf lamina (Δ18Ol_suc) and petiole phloem (Δ18Ophl_suc) under environmentally/physiologically stable conditions. Based on the determined Δ18Ophl_suc-Δ18Ol_suc relationships, we estimated that on average, at least 25% of the oxygen atoms in sucrose undergo isotopic exchange with water along the leaf-to-phloem translocation path and that the biochemical fractionation factor accounting for such exchange is c. 34‰, markedly higher than the conventionally assumed value of 27‰. Our study represents a significant step toward quantitative elucidation of the oxygen isotope dynamics during sucrose translocation in trees. This has important implications with respect to improving the δ18Ocel model and its related applications in paleoclimatic and ecophysiological contexts.

On the Chemical Purity and Oxygen Isotopic Composition of α-Cellulose Extractable from Higher Plants and the Implications for Climate, Metabolic, and Physiological Studies

The ¹⁸O/¹⁶O ratio of α-cellulose in land plants has proved of interest for climate, environmental, physiological, and metabolic studies. Reliable application of such a ratio may be compromised by the presence of hemicellulose impurities in the α-cellulose product obtainable with current extraction methods, as the impurities are known to be isotopically different from that of the α-cellulose. We first compared the quality of hydrolysates of "α-cellulose products" obtained with four representative extraction methods (Jayme and Wise; Brendel; Zhou; Loader) and quantified the hemicellulose-derived non-glucose sugars in the α-cellulose products from 40 land grass species using gas chromatography-mass spectrometry (GC/MS). Second, we performed compound-specific isotope analysis of the hydrolysates using GC/Pyrolysis/IRMS. These results were then compared with the bulk isotope analysis using EA/Pyrolysis/IRMS of the α-cellulose products. We found that overall, the Zhou method afforded the highest purity α-cellulose as judged by the minimal presence of lignin and the second-lowest presence of non-glucose sugars. Isotopic analysis then showed that the O-2-O-6 of the α-cellulose glucosyl units were all depleted in ¹⁸O by 0.0-4.3 mUr (average, 1.9 mUr) in a species-dependent manner relative to the α-cellulose products. The positive isotopic bias of using the α-cellulose product instead of the glucosyl units stems mainly from the fact that the pentoses that dominate hemicellulose contamination in the α-cellulose product are relatively enriched in ¹⁸O (compared to hexoses) as they inherit only the relatively ¹⁸O-enriched O-2-O-5 moiety of sucrose, the common precursor of pentoses and hexoses in cellulose, and are further enriched in ¹⁸O by the (incomplete) hydrolysis.

Explicitly accounting for needle sugar pool size crucial for predicting intra-seasonal dynamics of needle carbohydrates δ18 O and δ13 C

We explore needle sugar isotopic compositions (δ¹⁸ O and δ¹³ C) in boreal Scots pine (Pinus sylvestris) over two growing seasons. A leaf-level dynamic model driven by environmental conditions and based on current understanding of isotope fractionation processes was built to predict δ¹⁸ O and δ¹³ C of two hierarchical needle carbohydrate pools, accounting for the needle sugar pool size and the presence of an invariant pinitol pool. Model results agreed well with observed needle water δ¹⁸ O, δ¹⁸ O and δ¹³ C of needle water-soluble carbohydrates (sugars + pinitol), and needle sugar δ¹³ C (R²  = 0.95, 0.84, 0.60, 0.73, respectively). Relative humidity (RH) and intercellular to ambient CO₂ concentration ratio (C_i /C_a ) were the dominant drivers of δ¹⁸ O and δ¹³ C variability, respectively. However, the variability of needle sugar δ¹⁸ O and δ¹³ C was reduced on diel and intra-seasonal timescales, compared to predictions based on instantaneous RH and C_i /C_a , due to the large needle sugar pool, which caused the signal formation period to vary seasonally from 2 d to more than 5 d. Furthermore, accounting for a temperature-sensitive biochemical ¹⁸ O-fractionation factor and mesophyll resistance in ¹³ C-discrimination were critical. Interpreting leaf-level isotopic signals requires understanding on time integration caused by mixing in the needle sugar pool.

The 18 O-signal transfer from water vapour to leaf water and assimilates varies among plant species and growth forms

The ¹⁸ O signature of atmospheric water vapour (δ¹⁸ O_V ) is known to be transferred via leaf water to assimilates. It remains, however, unclear how the ¹⁸ O-signal transfer differs among plant species and growth forms. We performed a 9-hr greenhouse fog experiment (relative humidity ≥ 98%) with ¹⁸ O-depleted water vapour (-106.7‰) on 140 plant species of eight different growth forms during daytime. We quantified the ¹⁸ O-signal transfer by calculating the mean residence time of O in leaf water (MRT_LW ) and sugars (MRT_Sugars ) and related it to leaf traits and physiological drivers. MRT_LW increased with leaf succulence and thickness, varying between 1.4 and 10.8 hr. MRT_Sugars was shorter in C₃ and C₄ plants than in crassulacean acid metabolism (CAM) plants and highly variable among species and growth forms; MRT_Sugars was shortest for grasses and aquatic plants, intermediate for broadleaf trees, shrubs, and herbs, and longest for conifers, epiphytes, and succulents. Sucrose was more sensitive to δ¹⁸ O_V variations than other assimilates. Our comprehensive study shows that plant species and growth forms vary strongly in their sensitivity to δ¹⁸ O_V variations, which is important for the interpretation of δ¹⁸ O values in plant organic material and compounds and thus for the reconstruction of climatic conditions and plant functional responses.

The effect of 18 O-labelled water vapour on the oxygen isotope ratio of water and assimilates in plants at high humidity

Our understanding of how temporal variations of atmospheric water vapour and its isotopic composition (δ¹⁸ O_V ) influence water and assimilates in plants remains limited, restricting our ability to use δ¹⁸ O as a tracer of ecophysiological processes. We exposed oak (Quercus robur) saplings under wet and dry soil moisture conditions to ¹⁸ O-depleted water vapour (c. - 200‰) at high relative humidity (c. 93%) for 5 h, simulating a fog event. We then traced the step change in δ¹⁸ O_V into water and assimilates (e.g. sucrose, hexoses, quercitol and starch) in the leaf lamina, main veins and twigs over 24 h. The immediate δ¹⁸ O_V effect was highest for δ¹⁸ O of leaf lamina water, but 40% lower on δ¹⁸ O of main vein water. To a smaller extent, we also observed changes in δ¹⁸ O of twig xylem water. Depending on the individual assimilation rate of each plant, the ¹⁸ O-label was partitioned among different assimilates, with highest changes in δ¹⁸ O of starch/sucrose and lowest in δ¹⁸ O of quercitol. Additionally, ¹⁸ O-label partitioning and allocation towards leaf starch and twig phloem sugars was influenced by the plant water status. Our results have important implications for water isotope heterogeneity in plants and for our understanding of how the δ¹⁸ O signal is incorporated into biomarkers.

Oxygen isotope analysis of levoglucosan, a tracer of wood burning, in experimental and ambient aerosol samples

RATIONALE

Levoglucosan is formed from cellulose during biomass burning. It is therefore often used as a specific tracer to quantify the contribution of wood burning to the aerosol loading. The stable oxygen isotope composition (δ¹⁸ O value) of biomass is determined by the water cycle and varies regionally, and hence the δ¹⁸ O value of levoglucosan could help to identify source regions of organic aerosols.

METHODS

After solvent extraction of the organic fraction and concentration steps, a recently developed methylation derivatisation technique was applied on experimental (i.e. controlled wood-burning experiments) and on ambient aerosol samples from Switzerland and Lithuania. The method achieves sufficient compound separation for isotope analysis in atmospheric particulate matter, enabling δ¹⁸ O analysis of levoglucosan by gas chromatography/pyrolysis-isotope ratio mass spectrometry (GC/Pyr-IRMS), with a precision better than 1.0 ‰ and an accuracy of 0.3 ‰.

RESULTS

The δ¹⁸ O value of the levoglucosan released during controlled wood-burning experiments was not significantly different from the cellulose δ¹⁸ O values, which implies very little or no isotope fractionation during wood burning under the given conditions. While the δ¹⁸ O values of levoglucosan in Swiss samples were as expected for the source region, those in Lithuania were 1-4 ‰ lower than expected. This may be due to differences in vegetation (grass vs wood) or burning conditions (high vs low temperatures).

CONCLUSIONS

Low oxygen isotope fractionation between cellulose and levoglucosan and clear differences in levoglucosan δ¹⁸ O values between the Swiss and Lithuanian ambient samples demonstrate that our new method is useful for source appointment studies on wood-burning-derived aerosols.

Oxygen isotope fractionations across individual leaf carbohydrates in grass and tree species

Almost no δ¹⁸ O data are available for leaf carbohydrates, leaving a gap in the understanding of the δ¹⁸ O relationship between leaf water and cellulose. We measured δ¹⁸ O values of bulk leaf water (δ¹⁸ O_LW ) and individual leaf carbohydrates (e.g. fructose, glucose and sucrose) in grass and tree species and δ¹⁸ O of leaf cellulose in grasses. The grasses were grown under two relative humidity (rH) conditions. Sucrose was generally ¹⁸ O-enriched compared with hexoses across all species with an apparent biosynthetic fractionation factor (ε_bio ) of more than 27‰ relative to δ¹⁸ O_LW , which might be explained by isotopic leaf water and sucrose synthesis gradients. δ¹⁸ O_LW and δ¹⁸ O values of carbohydrates and cellulose in grasses were strongly related, indicating that the leaf water signal in carbohydrates was transferred to cellulose (ε_bio  = 25.1‰). Interestingly, damping factor p_ex p_x , which reflects oxygen isotope exchange with less enriched water during cellulose synthesis, responded to rH conditions if modelled from δ¹⁸ O_LW but not if modelled directly from δ¹⁸ O of individual carbohydrates. We conclude that δ¹⁸ O_LW is not always a good substitute for δ¹⁸ O of synthesis water due to isotopic leaf water gradients. Thus, compound-specific δ¹⁸ O analyses of individual carbohydrates are helpful to better constrain (post-)photosynthetic isotope fractionation processes in plants.

Evaluation of the performance of high temperature conversion reactors for compound-specific oxygen stable isotope analysis

In this study conversion conditions for oxygen gas chromatography high temperature conversion (HTC) isotope ratio mass spectrometry (IRMS) are characterised using qualitative mass spectrometry (IonTrap). It is shown that physical and chemical properties of a given reactor design impact HTC and thus the ability to accurately measure oxygen isotope ratios. Commercially available and custom-built tube-in-tube reactors were used to elucidate (i) by-product formation (carbon dioxide, water, small organic molecules), (ii) 2nd sources of oxygen (leakage, metal oxides, ceramic material), and (iii) required reactor conditions (conditioning, reduction, stability). The suitability of the available HTC approach for compound-specific isotope analysis of oxygen in volatile organic molecules like methyl tert-butyl ether is assessed. Main problems impeding accurate analysis are non-quantitative HTC and significant carbon dioxide by-product formation. An evaluation strategy combining mass spectrometric analysis of HTC products and IRMS ¹⁸O/¹⁶O monitoring for future method development is proposed.

Liquid Biopsies for Cancer: Coming to a Patient near You

The use of circulating tumor DNA (ctDNA) as a novel and non-invasive test for the diagnosis and surveillance of cancer is a rapidly growing area of interest, with sequencing of ctDNA acting as a potential surrogate for tissue biopsy. Circulating tumor DNA has been detected incidentally during noninvasive prenatal testing and additionally in more than 75% of known cancer patients participating in ctDNA studies evaluating its sensitivity. In the setting of mutation-based targeted tumor therapy, it shows a concordance rate >80% when compared with gold-standard tissue biopsies. Through ctDNA detection and sequencing, a simple blood test becomes a liquid biopsy for cancer, surveying a patient’s entire circulation with the goal of early detection, prognostic information, personalized therapy options, and tracking for recurrence or resistance, all with fewer or no tissue biopsies. Given the recent first-ever FDA approval of a liquid biopsy, it is important for clinicians to be aware of the rapid advancements likely to bring these tests into our practices soon. Here we review the biology, clinical implications, and recent advances in circulating tumor DNA analysis.