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Claudia MV, Javiera AA, Sebastián NS, José FR, Gloria L. Interplay between desiccation and oxidative stress responses in iron-oxidizing acidophilic bacteria. J Biotechnol 2024; 383:64-72. [PMID: 38311245 DOI: 10.1016/j.jbiotec.2024.01.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Revised: 01/15/2024] [Accepted: 01/30/2024] [Indexed: 02/10/2024]
Abstract
Variations in water availability represent a foremost stress factor affecting the growth and survival of microorganisms. Acidophilic bioleaching bacteria are industrially applied for releasing metals from mineral sulphides, and they are considered extremely tolerant to oxidative conditions prevailing in acidic bioleaching environments. Such processes usually are performed in heaps and thus these microorganisms are also exposed to intermittent desiccations or high osmolarity periods that reduce the water availability. However, the tolerance to water stress and the molecular basis of adaptation to it are still largely unknown. The aim of this work was to determine the cellular response to desiccation stress and establish its relationship to oxidative stress response in the acidophilic iron-oxidizing bacteria Acidithiobacillus ferrooxidans ATCC 23270 and Leptospirillum ferriphilum DSM 14647. Results showed that the exposure of cell cultures to desiccation (0-120 min) led to a significant reduction in cell growth, and to an increase in content in reactive oxygen species in both bacteria. However, Leptospirillum ferriphilum turned out to be more tolerant than Acidithiobacillus ferrooxidans. In addition, the pre-treatment of the cell cultures with compatible solutes (trehalose and ectoine), and antioxidants (glutathione and cobalamin) restored all stress parameters to levels exhibited by the control cultures. To evaluate the role of the osmotic and redox homeostasis mechanisms in coping with desiccation stress, the relative expression of a set of selected genes was approached by RT-qPCR experiments in cells exposed to desiccation for 30 min. Results showed a generalized upregulation of genes that code for mechanosensitive channels, and enzymes related to the biosynthesis of compatible solutes and oxidative stress response in both bacteria. These data suggest that acidophiles show variable tolerance to desiccation and allow to establish that water stress can trigger oxidative stress, and thus anti-oxidative protection capability can be a relevant mechanism when cells are challenged by desiccation or other anhydrobiosis states.
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Affiliation(s)
- Muñoz-Villagrán Claudia
- Department of Biology, Faculty of Chemistry and Biology, University of Santiago of Chile (USACH), Av. Libertador Bernardo O'Higgins, Santiago 3363, Chile
| | - Acevedo-Arbunic Javiera
- Department of Biology, Faculty of Chemistry and Biology, University of Santiago of Chile (USACH), Av. Libertador Bernardo O'Higgins, Santiago 3363, Chile
| | - Navarro-Salazar Sebastián
- Department of Biology, Faculty of Chemistry and Biology, University of Santiago of Chile (USACH), Av. Libertador Bernardo O'Higgins, Santiago 3363, Chile
| | - Fuentes-Rubio José
- Department of Biology, Faculty of Chemistry and Biology, University of Santiago of Chile (USACH), Av. Libertador Bernardo O'Higgins, Santiago 3363, Chile
| | - Levicán Gloria
- Department of Biology, Faculty of Chemistry and Biology, University of Santiago of Chile (USACH), Av. Libertador Bernardo O'Higgins, Santiago 3363, Chile.
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Zhang T, Zhang Y, Xu K, Ding X, Wei H, Chao C, Wang B, Wang B. Robotic drilling tests in simulated lunar regolith environment. J FIELD ROBOT 2021. [DOI: 10.1002/rob.22018] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Tao Zhang
- Department of Mechatronics Engineering, School of Electromechanical Engineering Guangdong University of Technology Guangzhou China
- Robot Institute, School of Mechanical Engineering and Automation Beihang University Beijing China
- Department of Physical Intelligence Max‐Planck Institute for Intelligent Systems Stuttgart Germany
| | - Yinliang Zhang
- Department of Mechatronics Engineering, School of Electromechanical Engineering Guangdong University of Technology Guangzhou China
| | - Kun Xu
- Robot Institute, School of Mechanical Engineering and Automation Beihang University Beijing China
| | - Xilun Ding
- Robot Institute, School of Mechanical Engineering and Automation Beihang University Beijing China
| | - Hongyu Wei
- Department of Mechatronics Engineering, School of Electromechanical Engineering Guangdong University of Technology Guangzhou China
| | - Chaoyue Chao
- Department of Mechatronics Engineering, School of Electromechanical Engineering Guangdong University of Technology Guangzhou China
| | - Bin Wang
- Department of Mechatronics Engineering, School of Electromechanical Engineering Guangdong University of Technology Guangzhou China
| | - Bing Wang
- Department of Mechatronics Engineering, School of Electromechanical Engineering Guangdong University of Technology Guangzhou China
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Frigeri A, Ercoli M. The ScanMars Subsurface Radar Sounding Experiment on AMADEE-18. ASTROBIOLOGY 2020; 20:1338-1352. [PMID: 33179967 DOI: 10.1089/ast.2019.2037] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Terrestrial simulations for crewed missions are critically important for testing technologies and improving methods and procedures for future robotic and human planetary exploration. In February 2018, AMADEE-18 simulated a mission to Mars in the Dhofar region of Oman. During the mission, a field crew coordinated by the Österreichisches Weltraum Forum (OeWF) accomplished several experiments in the fields of astrobiology, space physiology and medicine, geology, and geophysics. Within the scientific payload of AMADEE-18, ScanMars provided geophysical radar imaging of the subsurface at the simulated landing site and was operated by analog astronauts wearing spacesuits during extra-vehicular activities. The analog astronauts were trained to operate a ground-penetrating radar instrument that transmits and then collects radio waves carrying information about the geological setting of the first few meters of the subsurface. The data presented in this work show signal returns from structures down to 4 m depth, associated with the geology of the investigated rocks. Integrating radar data and the analog astronauts' observations of the geology at the surface, it was possible to identify the contact between shallow sediments and bedrock, the local occurrence of conductive soils, and the presence of pebbly materials in the shallow subsurface, which together describe the geology of recent loose sediments overlying an older deformed bedrock. The results obtained by ScanMars confirm that subsurface radar sounding at martian landing sites is key for the geological characterization at shallow depths. The geologic model of the subsurface can be used as the basis for reconstructing palaeoenvironments and paleo-habitats, thus assisting scientific investigations looking for traces of present or past life on the Red Planet. Highlights The ScanMars experiment brings a ground-penetrating radar to the AMADEE-18 simulated Mars mission. The ScanMars radar was operated following procedures and training developed before the mission. Approximately 2000 m of radar data profiles have been acquired during the analog mission. Combining the results for ScanMars, orbital remote sensing data, and first-person observation in the field while wearing spacesuits (analog astronauts), it was possible to generate a geological model at the AMADEE-18 study site.
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Affiliation(s)
- Alessandro Frigeri
- Istituto di Astrofisica e Planetologia Spaziali (IAPS), Istituto Nazionale di Astrofisica (INAF), Rome, Italy
| | - Maurizio Ercoli
- Dipartimento di Fisica e Geologia, Università degli Studi di Perugia, Perugia, Italy
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Lim DS, Abercromby AF, Kobs Nawotniak SE, Lees DS, Miller MJ, Brady AL, Miller MJ, Mirmalek Z, Sehlke A, Payler SJ, Stevens AH, Haberle CW, Beaton KH, Chappell SP, Hughes SS, Cockell CS, Elphic RC, Downs MT, Heldmann JL. The BASALT Research Program: Designing and Developing Mission Elements in Support of Human Scientific Exploration of Mars. ASTROBIOLOGY 2019; 19:245-259. [PMID: 30840510 PMCID: PMC6442272 DOI: 10.1089/ast.2018.1869] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2018] [Accepted: 04/23/2018] [Indexed: 05/26/2023]
Abstract
The articles associated with this Special Collection focus on the NASA BASALT (Biologic Analog Science Associated with Lava Terrains) Research Program, which aims at answering the question, "How do we support and enable scientific exploration during human Mars missions?" To answer this the BASALT team conducted scientific field studies under simulated Mars mission conditions to both broaden our understanding of the habitability potential of basalt-rich terrains on Mars and examine the effects of science on current Mars mission concepts of operations. This article provides an overview of the BASALT research project, from the science, to the operational concepts that were tested and developed, to the technical capabilities that supported all elements of the team's research. Further, this article introduces the 12 articles that are included in this Special Collection.
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Affiliation(s)
- Darlene S.S. Lim
- Bay Area Environmental Research Institute (BAERI), NASA Research Park, Moffett Field, California
- NASA Ames Research Center, Moffett Field, California
| | | | | | - David S. Lees
- NASA Ames Research Center, Moffett Field, California
| | | | - Allyson L. Brady
- School of Geography and Earth Sciences, McMaster University, Hamilton, Canada
| | | | - Zara Mirmalek
- Bay Area Environmental Research Institute (BAERI), NASA Research Park, Moffett Field, California
| | | | - Samuel J. Payler
- UK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh, Edinburgh, United Kingdom
| | - Adam H. Stevens
- UK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh, Edinburgh, United Kingdom
| | - Christopher W. Haberle
- Mars Space Flight Facility, School of Earth and Space Exploration, Arizona State University, Tempe, Arizona
| | - Kara H. Beaton
- NASA Johnson Space Center, Houston, Texas
- KBRwyle, Houston, Texas
| | | | - Scott S. Hughes
- Deparment of Geosciences, Idaho State University, Pocatello, Idaho
| | - Charles S. Cockell
- UK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh, Edinburgh, United Kingdom
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Garcia-Guinea J, Furio M, Sanchez-Moral S, Jurado V, Correcher V, Saiz-Jimenez C. Composition and spectra of copper-carotenoid sediments from a pyrite mine stream in Spain. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 135:203-210. [PMID: 25064504 DOI: 10.1016/j.saa.2014.07.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2014] [Revised: 06/10/2014] [Accepted: 07/02/2014] [Indexed: 06/03/2023]
Abstract
Mine drainages of La Poderosa (El Campillo, Huelva, Spain), located in the Rio Tinto Basin (Iberian Pyrite Belt) generate carotenoid complexes mixed with copper sulfates presenting good natural models for the production of carotenoids from microorganisms. The environmental conditions of Rio Tinto Basin include important environmental stresses to force the microorganisms to accumulate carotenoids. Here we show as carotenoid compounds in sediments can be analyzed directly in the solid state by Raman and Luminescence spectroscopy techniques to identify solid carotenoid, avoiding dissolution and pre-concentration treatments, since the hydrous copper-salted paragenesis do not mask the Raman emission of carotenoids. Raman spectra recorded from one of these specimens' exhibit major features at approximately 1006, 1154, and 1520 cm(-1). The bands at 1520 cm(-1) and 1154 cm(-1) can be assigned to in-phase C=C (γ(-1)) and C-C stretching (γ(-2)) vibrations of the polyene chain in carotenoids. The in-plane rocking deformations of CH3 groups linked to this chain coupled with C-C bonds are observed in the 1006 cm(-1) region. X-irradiation pretreatments enhance the cathodoluminescence spectra emission of carotenoids enough to distinguish organic compounds including hydroxyl and carboxyl groups. Carotenoids in copper-sulfates could be used as biomarkers and useful proxies for understanding remote mineral formations as well as for terrestrial environmental investigations related to mine drainage contamination including biological activity and photo-oxidation processes.
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Affiliation(s)
- Javier Garcia-Guinea
- Museo Nacional de Ciencias Naturales (MNCN-CSIC), Calle José Gutiérrez Abascal 2, 28006 Madrid, Spain.
| | - Marta Furio
- Museo Nacional de Ciencias Naturales (MNCN-CSIC), Calle José Gutiérrez Abascal 2, 28006 Madrid, Spain.
| | - Sergio Sanchez-Moral
- Museo Nacional de Ciencias Naturales (MNCN-CSIC), Calle José Gutiérrez Abascal 2, 28006 Madrid, Spain.
| | - Valme Jurado
- Instituto de Recursos Naturales y Agrobiología (IRNAS-CSIC), Avenida Reina Mercedes 10, 41012 Sevilla, Spain.
| | - Virgilio Correcher
- Dpto. Dosimetría de Radiaciones, CIEMAT, Avenida Complutense 22, 28040 Madrid, Spain.
| | - Cesareo Saiz-Jimenez
- Instituto de Recursos Naturales y Agrobiología (IRNAS-CSIC), Avenida Reina Mercedes 10, 41012 Sevilla, Spain.
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Bechlioulis CP, Doulgeri Z, Rovithakis GA. Neuro-Adaptive Force/Position Control With Prescribed Performance and Guaranteed Contact Maintenance. ACTA ACUST UNITED AC 2010; 21:1857-68. [PMID: 20923732 DOI: 10.1109/tnn.2010.2076302] [Citation(s) in RCA: 100] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Miller DP, Bonaccorsi R, Davis K. Design and practices for use of automated drilling and sample handling in MARTE while minimizing terrestrial and cross contamination. ASTROBIOLOGY 2008; 8:947-965. [PMID: 19105753 DOI: 10.1089/ast.2007.0147] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Mars Astrobiology Research and Technology Experiment (MARTE) investigators used an automated drill and sample processing hardware to detect and categorize life-forms found in subsurface rock at Río Tinto, Spain. For the science to be successful, it was necessary for the biomass from other sources--whether from previously processed samples (cross contamination) or the terrestrial environment (forward contamination)-to be insignificant. The hardware and practices used in MARTE were designed around this problem. Here, we describe some of the design issues that were faced and classify them into problems that are unique to terrestrial tests versus problems that would also exist for a system that was flown to Mars. Assessment of the biomass at various stages in the sample handling process revealed mixed results; the instrument design seemed to minimize cross contamination, but contamination from the surrounding environment sometimes made its way onto the surface of samples. Techniques used during the MARTE Río Tinto project, such as facing the sample, appear to remove this environmental contamination without introducing significant cross contamination from previous samples.
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Stoker CR, Cannon HN, Dunagan SE, Lemke LG, Glass BJ, Miller D, Gomez-Elvira J, Davis K, Zavaleta J, Winterholler A, Roman M, Rodriguez-Manfredi JA, Bonaccorsi R, Bell MS, Brown A, Battler M, Chen B, Cooper G, Davidson M, Fernández-Remolar D, Gonzales-Pastor E, Heldmann JL, Martínez-Frías J, Parro V, Prieto-Ballesteros O, Sutter B, Schuerger AC, Schutt J, Rull F. The 2005 MARTE Robotic Drilling Experiment in Río Tinto, Spain: objectives, approach, and results of a simulated mission to search for life in the Martian subsurface. ASTROBIOLOGY 2008; 8:921-945. [PMID: 19032053 DOI: 10.1089/ast.2007.0217] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
The Mars Astrobiology Research and Technology Experiment (MARTE) simulated a robotic drilling mission to search for subsurface life on Mars. The drill site was on Peña de Hierro near the headwaters of the Río Tinto river (southwest Spain), on a deposit that includes massive sulfides and their gossanized remains that resemble some iron and sulfur minerals found on Mars. The mission used a fluidless, 10-axis, autonomous coring drill mounted on a simulated lander. Cores were faced; then instruments collected color wide-angle context images, color microscopic images, visible-near infrared point spectra, and (lower resolution) visible-near infrared hyperspectral images. Cores were then stored for further processing or ejected. A borehole inspection system collected panoramic imaging and Raman spectra of borehole walls. Life detection was performed on full cores with an adenosine triphosphate luciferin-luciferase bioluminescence assay and on crushed core sections with SOLID2, an antibody array-based instrument. Two remotely located science teams analyzed the remote sensing data and chose subsample locations. In 30 days of operation, the drill penetrated to 6 m and collected 21 cores. Biosignatures were detected in 12 of 15 samples analyzed by SOLID2. Science teams correctly interpreted the nature of the deposits drilled as compared to the ground truth. This experiment shows that drilling to search for subsurface life on Mars is technically feasible and scientifically rewarding.
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Affiliation(s)
- Carol R Stoker
- NASA Ames Research Center, Moffett Field, California 94035, USA.
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Bonaccorsi R, Stoker CR. Science results from a Mars drilling simulation (Río Tinto, Spain) and ground truth for remote science observations. ASTROBIOLOGY 2008; 8:967-985. [PMID: 19105754 DOI: 10.1089/ast.2007.0152] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Science results from a field-simulated lander payload and post-mission laboratory investigations provided "ground truth" to interpret remote science observations made as part of the 2005 Mars Astrobiology Research and Technology Experiment (MARTE) drilling mission simulation. The experiment was successful in detecting evidence for life, habitability, and preservation potential of organics in a relevant astrobiological analogue of Mars. SCIENCE RESULTS: Borehole 7 was drilled near the Río Tinto headwaters at Peña de Hierro (Spain) in the upper oxidized remnant of an acid rock drainage system. Analysis of 29 cores (215 cm of core was recovered from 606 cm penetrated depth) revealed a matrix of goethite- (42-94%) and hematite-rich (47-87%) rocks with pockets of phyllosilicates (47-74%) and fine- to coarse-grained loose material. Post-mission X-ray diffraction (XRD) analysis confirmed the range of hematite:goethite mixtures that were visually recognizable (approximately 1:1, approximately 1:2, and approximately 1:3 mixtures displayed a yellowish-red color whereas 3:1 mixtures displayed a dark reddish-brown color). Organic carbon was poorly preserved in hematite/goethite-rich materials (C(org) <0.05 wt %) beneath the biologically active organic-rich soil horizon (C(org) approximately 3-11 wt %) in contrast to the phyllosilicate-rich zones (C(org) approximately 0.23 wt %). GROUND TRUTH VS. REMOTE SCIENCE ANALYSIS: Laboratory-based analytical results were compared to the analyses obtained by a Remote Science Team (RST) using a blind protocol. Ferric iron phases, lithostratigraphy, and inferred geologic history were correctly identified by the RST with the exception of phyllosilicate-rich materials that were misinterpreted as weathered igneous rock. Adenosine 5'-triphosphate (ATP) luminometry, a tool available to the RST, revealed ATP amounts above background noise, i.e., 278-876 Relative Luminosity Units (RLUs) in only 6 cores, whereas organic carbon was detected in all cores. Our manned vs. remote observations based on automated acquisitions during the project provide insights for the preparation of future astrobiology-driven Mars missions.
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Zacny K, Bar-Cohen Y, Brennan M, Briggs G, Cooper G, Davis K, Dolgin B, Glaser D, Glass B, Gorevan S, Guerrero J, McKay C, Paulsen G, Stanley S, Stoker C. Drilling systems for extraterrestrial subsurface exploration. ASTROBIOLOGY 2008; 8:665-706. [PMID: 18598141 DOI: 10.1089/ast.2007.0179] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Drilling consists of 2 processes: breaking the formation with a bit and removing the drilled cuttings. In rotary drilling, rotational speed and weight on bit are used to control drilling, and the optimization of these parameters can markedly improve drilling performance. Although fluids are used for cuttings removal in terrestrial drilling, most planetary drilling systems conduct dry drilling with an auger. Chip removal via water-ice sublimation (when excavating water-ice-bound formations at pressure below the triple point of water) and pneumatic systems are also possible. Pneumatic systems use the gas or vaporization products of a high-density liquid brought from Earth, gas provided by an in situ compressor, or combustion products of a monopropellant. Drill bits can be divided into coring bits, which excavate an annular shaped hole, and full-faced bits. While cylindrical cores are generally superior as scientific samples, and coring drills have better performance characteristics, full-faced bits are simpler systems because the handling of a core requires a very complex robotic mechanism. The greatest constraints to extraterrestrial drilling are (1) the extreme environmental conditions, such as temperature, dust, and pressure; (2) the light-time communications delay, which necessitates highly autonomous systems; and (3) the mission and science constraints, such as mass and power budgets and the types of drilled samples needed for scientific analysis. A classification scheme based on drilling depth is proposed. Each of the 4 depth categories (surface drills, 1-meter class drills, 10-meter class drills, and deep drills) has distinct technological profiles and scientific ramifications.
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Affiliation(s)
- K Zacny
- Honeybee Robotics Spacecraft Mechanisms Corporation, New York, NY 10001, USA.
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