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Iheshiulo EMA, Larney FJ, Hernandez-Ramirez G, St Luce M, Chau HW, Liu K. Quantitative evaluation of soil health based on a minimum dataset under various short-term crop rotations on the Canadian prairies. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 935:173335. [PMID: 38763194 DOI: 10.1016/j.scitotenv.2024.173335] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Revised: 05/15/2024] [Accepted: 05/16/2024] [Indexed: 05/21/2024]
Abstract
Maintaining and improving soil health (SH) is essential for the long-term sustainability and productivity of agriculture, notably in the face of climate change. This study addressed the challenge of selecting appropriate soil indicators, scoring methods, and indexing approaches for SH evaluation under no-till crop rotations. This study aimed to develop minimum datasets (MDS) and assess SH in six crop rotations (denoted as conventional, diversified, high-risk and high-reward, market-driven, pulse-oilseed intensified, and soil health-enhanced rotations) at three sites on the Canadian prairies. Fourteen soil indicators in the total dataset (TDS) were examined, encompassing both chemical (0-7.5 cm depth) and physical (5-10 cm depth) properties. Principal component analysis (PCA) identified MDSs from the TDS. Two scoring [linear (L) and non-linear (NL)] and two SH indexing approaches [additive (A) and weighted additive (WA)] were used to calculate the SH index (SHI). One-way ANOVA evaluated the SHI among crop rotations. The PCA revealed variations in the number of indicators in the MDS across sites, with soil organic carbon, bulk density, macroporosity, and plant-available water capacity as the common indicators for MDS across sites. Other indicators such as particulate organic matter carbon, aggregate stability, field capacity, and microporosity were found to be important, depending on the site. The non-linear weighted additive SH indexing (SHI.NLWA) proved to be the most sensitive and effective for differentiating among crop rotations in the short-term across study sites (R2 = 0.89-0.94, P < 0.05). Crop rotations significantly influenced SHI, with the diversified and high-risk and high-reward rotations having the highest SHI at Lethbridge and Scott, respectively. Overall, the diversified rotation at Lethbridge and Swift Current, along with the high-risk and high-reward rotation at Scott, exhibited better soil function than other rotations. Monitoring SHI over time and selecting crop rotations that improve SH can collectively enhance soil functions and agroecosystem productivity.
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Affiliation(s)
- Ekene Mark-Anthony Iheshiulo
- Department of Renewable Resources, University of Alberta, Edmonton, Alberta, Canada; Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, Canada.
| | - Francis J Larney
- Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, Canada
| | | | - Mervin St Luce
- Swift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, Saskatchewan, Canada
| | - Henry Wai Chau
- Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, Canada
| | - Kui Liu
- Swift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, Saskatchewan, Canada
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Kumar D, Ali M, Sharma N, Sharma R, Manhas RK, Ohri P. Unboxing PGPR-mediated management of abiotic stress and environmental cleanup: what lies inside? ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:47423-47460. [PMID: 38992305 DOI: 10.1007/s11356-024-34157-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Accepted: 06/24/2024] [Indexed: 07/13/2024]
Abstract
Abiotic stresses including heavy metal toxicity, drought, salt and temperature extremes disrupt the plant growth and development and lowers crop output. Presence of environmental pollutants further causes plants suffering and restrict their ability to thrive. Overuse of chemical fertilizers to reduce the negative impact of these stresses is deteriorating the environment and induces various secondary stresses to plants. Therefore, an environmentally friendly strategy like utilizing plant growth-promoting rhizobacteria (PGPR) is a promising way to lessen the negative effects of stressors and to boost plant growth in stressful conditions. These are naturally occurring inhabitants of various environments, an essential component of the natural ecosystem and have remarkable abilities to promote plant growth. Furthermore, multifarious role of PGPR has recently been widely exploited to restore natural soil against a range of contaminants and to mitigate abiotic stress. For instance, PGPR may mitigate metal phytotoxicity by boosting metal translocation inside the plant and changing the metal bioavailability in the soil. PGPR have been also reported to mitigate other abiotic stress and to degrade environmental contaminants remarkably. Nevertheless, despite the substantial quantity of information that has been produced in the meantime, there has not been much advancement in either the knowledge of the processes behind the alleged positive benefits or in effective yield improvements by PGPR inoculation. This review focuses on addressing the progress accomplished in understanding various mechanisms behind the protective benefits of PGPR against a variety of abiotic stressors and in environmental cleanups and identifying the cause of the restricted applicability in real-world.
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Affiliation(s)
- Deepak Kumar
- Department of Zoology, Guru Nanak Dev University, Amritsar, 143005, Punjab, India
| | - Mohd Ali
- Department of Zoology, Guru Nanak Dev University, Amritsar, 143005, Punjab, India
| | - Nandni Sharma
- Department of Zoology, Guru Nanak Dev University, Amritsar, 143005, Punjab, India
| | - Roohi Sharma
- Department of Zoology, Guru Nanak Dev University, Amritsar, 143005, Punjab, India
| | - Rajesh Kumari Manhas
- Department of Microbiology, Guru Nanak Dev University, Amritsar, 143005, Punjab, India
| | - Puja Ohri
- Department of Zoology, Guru Nanak Dev University, Amritsar, 143005, Punjab, India.
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Mohan I, Joshi B, Pathania D, Dhar S, Bhau BS. Phytobial remediation advances and application of omics and artificial intelligence: a review. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:37988-38021. [PMID: 38780844 DOI: 10.1007/s11356-024-33690-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 05/11/2024] [Indexed: 05/25/2024]
Abstract
Industrialization and urbanization increased the use of chemicals in agriculture, vehicular emissions, etc., and spoiled all environmental sectors. It causes various problems among living beings at multiple levels and concentrations. Phytoremediation and microbial association are emerging as a potential method for removing heavy metals and other contaminants from soil. The treatment uses plant physiology and metabolism to remove or clean up various soil contaminants efficiently. In recent years, omics and artificial intelligence have been seen as powerful techniques for phytobial remediation. Recently, AI and modeling are used to analyze large data generated by omics technologies. Machine learning algorithms can be used to develop predictive models that can help guide the selection of the most appropriate plant and plant growth-promoting rhizobacteria combination that is most effective at remediation. In this review, emphasis is given to the phytoremediation techniques being explored worldwide in soil contamination.
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Affiliation(s)
- Indica Mohan
- Department of Environmental Sciences, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
- Department of Botany, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
| | - Babita Joshi
- Plant Molecular Genetics Laboratory, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, U.P., 226001, India
| | - Deepak Pathania
- Department of Environmental Sciences, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
- Department of Botany, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
| | - Sunil Dhar
- Department of Environmental Sciences, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
- Department of Botany, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
| | - Brijmohan Singh Bhau
- Department of Botany, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India.
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Maji P, Mistri B. Comparative assessment of soil quality dynamics using SQI modelling approach: a study in rice bowl of West Bengal, India. ENVIRONMENTAL MONITORING AND ASSESSMENT 2024; 196:567. [PMID: 38775991 DOI: 10.1007/s10661-024-12697-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2024] [Accepted: 04/30/2024] [Indexed: 06/21/2024]
Abstract
The study attempted to evaluate the agricultural soil quality using the Soil Quality Index (SQI) model in two Community Development Blocks, Ausgram-II and Memari-II of Purba Bardhaman District. Total 104 soil samples were collected (0-20 cm depth) from each Block to analyse 13 parameters (bulk density, soil porosity, soil aggregate stability, water holding capacity, infiltration rate, available nitrogen, available phosphorous, available potassium, soil pH, soil organic carbon, electrical conductivity, soil respiration and microbial biomass carbon) in this study. The Integrated Quality Index (IQI) was applied using the weighted additive approach and non-linear scoring technique to retain the Minimum Data Set (MDS). Principal Component Analysis (PCA) identified that SAS, BD, available K, pH, available N, and available P were the key contributing parameters to SQI in Ausgram-II. In contrast, WHC, SR, available N, pH, and SAS contributed the most to SQI in Memari-II. Results revealed that Ausgram-II (0.97) is notably higher SQI than Memari-II (0.69). In Ausgram-II, 99.72% of agricultural lands showed very high SQI (Grade I), whereas, in Memari-II, 49.95% of lands exhibited a moderate SQI (Grade III) and 49.90% showed a high SQI (Grade II). Sustainable Yield Index (SYI), Sensitivity Index (SI) and Efficiency Ratio (ER) were used to validate the SQIs. A positive correlation was observed between SQI and paddy ( R2 = 0.82 & 0.72) and potato yield (R2 = 0.71 & 0.78) in Ausgram-II and Memari-II Block, respectively. This study could evaluate the agricultural soil quality and provide insights for decision-making in fertiliser management practices to promote agricultural sustainability.
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Affiliation(s)
- Piyush Maji
- Department of Geography, The University of Burdwan, Burdwan, West Bengal, India, 713104.
| | - Biswaranjan Mistri
- Department of Geography, The University of Burdwan, Burdwan, West Bengal, India, 713104
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Fortuna AM, Starks PJ, Moriasi DN, Steiner JL. Use of archived data to derive soil health and water quality indicators for monitoring shifts in natural resources. JOURNAL OF ENVIRONMENTAL QUALITY 2023; 52:523-536. [PMID: 36932914 DOI: 10.1002/jeq2.20476] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Accepted: 03/10/2023] [Indexed: 05/06/2023]
Abstract
Current gaps impeding researchers from developing a soil and watershed health nexus include design of long-term field-scale experiments and statistical methodologies that link soil health indicators (SHI) with water quality indicators (WQI). Land cover is often used to predict WQI but may not reflect the effects of previous management such as legacy fertilizer applications, disturbance, and shifts in plant populations) and soil texture. Our research objectives were to use nonparametric Spearman rank-order correlations to identify SHI and WQI that were related across the Fort Cobb Reservoir experimental watershed (FCREW); use the resulting rho (r) and p values (P) to explore potential drivers of SHI-WQI relationships, specifically land use, management, and inherent properties (soil texture, aspect, elevation, slope); and interpret findings to make recommendations regarding assessment of the sustainability of land use and management. The SHI values used in the correlation matrix were weighted by soil texture and land management. The SHI that were significantly correlated with one or more WQI were available water capacity (AWC), Mehlich III soil P, and the sand to clay ratio (S:C). Mehlich III soil P was highly correlated with three WQI: total dissolved solids (TDS) (0.80; P < 0.01), electrical conductivity of water (EC-H2 O) (0.79; P < 0.01), and water nitrates (NO3 -H2 O) (0.76; P < 0.01). The correlations verified that soil texture and management jointly influence water quality (WQ), but the size of the soils dataset prohibited determination of the specific processes. Adoption of conservation tillage and grasslands within the FCREW improved WQ such that water samples met the U.S. Environmental Protection Agency (EPA) drinking water standards. Future research should integrate current WQI sampling sites into an edge-of-field design representing all management by soil series combinations within the FCREW.
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Affiliation(s)
- Ann-Marie Fortuna
- USDA-ARS, Plains Area, Oklahoma and Central Plains Agricultural Research Center, Agroclimate and Hydraulics Engineering Research Unit, 7207 W. Cheyenne St., El Reno, Oklahoma, 73036, USA
| | - Patrick J Starks
- USDA-ARS, Plains Area, Oklahoma and Central Plains Agricultural Research Center, Agroclimate and Hydraulics Engineering Research Unit, 7207 W. Cheyenne St., El Reno, Oklahoma, 73036, USA
| | - Daniel N Moriasi
- USDA-ARS, Plains Area, Oklahoma and Central Plains Agricultural Research Center, Agroclimate and Hydraulics Engineering Research Unit, 7207 W. Cheyenne St., El Reno, Oklahoma, 73036, USA
| | - Jean L Steiner
- USDA-ARS, Plains Area, Oklahoma and Central Plains Agricultural Research Center, Agroclimate and Hydraulics Engineering Research Unit, 7207 W. Cheyenne St., El Reno, Oklahoma, 73036, USA
- Department of Agronomy, Kansas State University, 2004 Throckmorton, PSC. 1712 Claflin Road, Manhattan, Kansas, 66506, USA
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Caro TA, McFarlin J, Jech S, Fierer N, Kopf S. Hydrogen stable isotope probing of lipids demonstrates slow rates of microbial growth in soil. Proc Natl Acad Sci U S A 2023; 120:e2211625120. [PMID: 37036980 PMCID: PMC10120080 DOI: 10.1073/pnas.2211625120] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Accepted: 03/06/2023] [Indexed: 04/12/2023] Open
Abstract
The rate at which microorganisms grow and reproduce is fundamental to our understanding of microbial physiology and ecology. While soil microbiologists routinely quantify soil microbial biomass levels and the growth rates of individual taxa in culture, there is a limited understanding of how quickly microbes actually grow in soil. For this work, we posed the simple question: what are the growth rates of soil microorganisms? In this study, we measure these rates in three distinct soil environments using hydrogen-stable isotope probing of lipids with 2H-enriched water. This technique provides a taxa-agnostic quantification of in situ microbial growth from the degree of 2H enrichment of intact polar lipid compounds ascribed to bacteria and fungi. We find that growth rates in soil are quite slow and correspond to average generation times of 14 to 45 d but are also highly variable at the compound-specific level (4 to 402 d), suggesting differential growth rates among community subsets. We observe that low-biomass microbial communities exhibit more rapid growth rates than high-biomass communities, highlighting that biomass quantity alone does not predict microbial productivity in soil. Furthermore, within a given soil, the rates at which specific lipids are being synthesized do not relate to their quantity, suggesting a general decoupling of microbial abundance and growth in soil microbiomes. More generally, we demonstrate the utility of lipid-stable isotope probing for measuring microbial growth rates in soil and highlight the importance of measuring growth rates to complement more standard analyses of soil microbial communities.
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Affiliation(s)
- Tristan A. Caro
- Department of Geological Sciences, University of Colorado Boulder, Boulder, CO80309
| | - Jamie McFarlin
- Department of Geology and Geophysics, University of Wyoming, Laramie, WY82071
| | - Sierra Jech
- Department of Ecology and Evolutionary Biology, University of Colorado Boulder, Boulder, CO80309
| | - Noah Fierer
- Department of Ecology and Evolutionary Biology, University of Colorado Boulder, Boulder, CO80309
- Cooperative Institute for Research in Environmental Sciences, University of Colorado Boulder, Boulder, CO80309
| | - Sebastian Kopf
- Department of Geological Sciences, University of Colorado Boulder, Boulder, CO80309
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Abdelmoneim TK, Mohamed MSM, Abdelhamid IA, Wahdan SFM, Atia MAM. Development of rapid and precise approach for quantification of bacterial taxa correlated with soil health. Front Microbiol 2023; 13:1095045. [PMID: 36713193 PMCID: PMC9878287 DOI: 10.3389/fmicb.2022.1095045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Accepted: 12/29/2022] [Indexed: 01/14/2023] Open
Abstract
The structure and dynamic of soil bacterial community play a crucial role in soil health and plant productivity. However, there is a gap in studying the un-/or reclaimed soil bacteriome and its impact on future plant performance. The 16S metagenomic analysis is expensive and utilize sophisticated pipelines, making it unfavorable for researchers. Here, we aim to perform (1) in silico and in vitro validation of taxon-specific qPCR primer-panel in the detection of the beneficial soil bacterial community, to ensure its specificity and precision, and (2) multidimensional analysis of three soils/locations in Egypt ('Q', 'B', and 'G' soils) in terms of their physicochemical properties, bacteriome composition, and wheat productivity as a model crop. The in silico results disclosed that almost all tested primers showed high specificity and precision toward the target taxa. Among 17 measured soil properties, the electrical conductivity (EC) value (up to 5 dS/m) of 'Q' soil provided an efficient indicator for soil health among the tested soils. The 16S NGS analysis showed that the soil bacteriome significantly drives future plant performance, especially the abundance of Proteobacteria and Actinobacteria as key indicators. The functional prediction analysis results disclosed a high percentage of N-fixing bacterial taxa in 'Q' soil compared to other soils, which reflects their positive impact on wheat productivity. The taxon-specific qPCR primer-panel results revealed a precise quantification of the targeted taxa compared to the 16S NGS analysis. Moreover, 12 agro-morphological parameters were determined for grown wheat plants, and their results showed a high yield in the 'Q' soil compared to other soils; this could be attributed to the increased abundance of Proteobacteria and Actinobacteria, high enrichment in nutrients (N and K), or increased EC/nutrient availability. Ultimately, the potential use of a taxon-specific qPCR primer-panel as an alternative approach to NGS provides a cheaper, user-friendly setup with high accuracy.
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Affiliation(s)
- Taghreed Khaled Abdelmoneim
- Genome Mapping Department, Agricultural Genetic Engineering Research Institute (AGERI), Agricultural Research Center (ARC), Giza, Egypt,Department of Chemistry, Faculty of Science, Cairo University, Giza, Egypt
| | - Mahmoud S. M. Mohamed
- Department of Botany and Microbiology, Faculty of Science, Cairo University, Giza, Egypt
| | | | | | - Mohamed A. M. Atia
- Genome Mapping Department, Agricultural Genetic Engineering Research Institute (AGERI), Agricultural Research Center (ARC), Giza, Egypt,*Correspondence: Mohamed A. M. Atia, ✉
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Rogiers SY, Greer DH, Liu Y, Baby T, Xiao Z. Impact of climate change on grape berry ripening: An assessment of adaptation strategies for the Australian vineyard. FRONTIERS IN PLANT SCIENCE 2022; 13:1094633. [PMID: 36618637 PMCID: PMC9811181 DOI: 10.3389/fpls.2022.1094633] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Accepted: 12/05/2022] [Indexed: 06/17/2023]
Abstract
Compressed vintages, high alcohol and low wine acidity are but a few repercussions of climate change effects on Australian viticulture. While warm and cool growing regions may have different practical concerns related to climate change, they both experience altered berry and must composition and potentially reduced desirable wine characteristics and market value. Storms, drought and uncertain water supplies combined with excessive heat not only depress vine productivity through altered physiology but can have direct consequences on the fruit. Sunburn, shrivelling and altered sugar-flavour-aroma balance are becoming more prevalent while bushfires can result in smoke taint. Moreover, distorted pest and disease cycles and changes in pathogen geographical distribution have altered biotic stress dynamics that require novel management strategies. A multipronged approach to address these challenges may include alternative cultivars and rootstocks or changing geographic location. In addition, modifying and incorporating novel irrigation regimes, vine architecture and canopy manipulation, vineyard floor management, soil amendments and foliar products such as antitranspirants and other film-forming barriers are potential levers that can be used to manage the effects of climate change. The adoption of technology into the vineyard including weather, plant and soil sensors are giving viticulturists extra tools to make quick decisions, while satellite and airborne remote sensing allow the adoption of precision farming. A coherent and comprehensive approach to climate risk management, with consideration of the environment, ensures that optimum production and exceptional fruit quality is maintained. We review the preliminary findings and feasibility of these new strategies in the Australian context.
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Affiliation(s)
- Suzy Y. Rogiers
- New South Wales Department of Primary Industries, Wollongbar, NSW, Australia
- Australian Research Council Training Centre for Innovative Wine Production, Urrbrae, SA, Australia
- Gulbali Institute, Charles Sturt University, Wagga Wagga, NSW, Australia
| | - Dennis H. Greer
- Gulbali Institute, Charles Sturt University, Wagga Wagga, NSW, Australia
| | - Yin Liu
- Australian Research Council Training Centre for Innovative Wine Production, Urrbrae, SA, Australia
- Gulbali Institute, Charles Sturt University, Wagga Wagga, NSW, Australia
- School of Agriculture Environmental and Veterinary Science, Charles Sturt University, Wagga Wagga, NSW, Australia
| | - Tintu Baby
- Gulbali Institute, Charles Sturt University, Wagga Wagga, NSW, Australia
| | - Zeyu Xiao
- Australian Research Council Training Centre for Innovative Wine Production, Urrbrae, SA, Australia
- Gulbali Institute, Charles Sturt University, Wagga Wagga, NSW, Australia
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Xie X, Qiu J, Feng X, Hou Y, Wang S, Jia S, Liu S, Hou X, Dou S. Spatial Distribution and Estimation Model of Soil pH in Coastal Eastern China. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:16855. [PMID: 36554730 PMCID: PMC9779465 DOI: 10.3390/ijerph192416855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Revised: 12/12/2022] [Accepted: 12/13/2022] [Indexed: 06/17/2023]
Abstract
Soil pH is an essential indicator for assessing soil quality and soil health. In this study, based on the Chinese farmland soil survey dataset and meteorological dataset, the spatial distribution characteristics of soil pH in coastal eastern China were analyzed using kriging interpolation. The relationships between hydrothermal conditions and soil pH were explored using regression analysis with mean annual precipitation (MAP), mean annual temperature (MAT), the ratio of precipitation to temperature (P/T), and the product of precipitation and temperature (P*T) as the main explanatory variables. Based on this, a model that can rapidly estimate soil pH was established. The results showed that: (a) The spatial heterogeneity of soil pH in coastal eastern China was obvious, with the values gradually decreasing from north to south, ranging from 4.5 to 8.5; (b) soil pH was significantly correlated with all explanatory variables at the 0.01 level. In general, MAP was the main factor affecting soil pH (r = -0.7244), followed by P/T (r = -0.6007). In the regions with MAP < 800 mm, soil pH was negatively correlated with MAP (r = -0.4631) and P/T (r = -0.7041), respectively, and positively correlated with MAT (r = 0.6093) and P*T (r = 0.3951), respectively. In the regions with MAP > 800 mm, soil pH was negatively correlated with MAP (r = -0.6651), MAT (r = -0.5047), P/T (r = -0.3268), and P*T (r = -0.5808), respectively. (c) The estimation model of soil pH was: y = 23.4572 - 6.3930 × lgMAP + 0.1312 × MAT. It has been verified to have a high accuracy (r = 0.7743, p < 0.01). The mean error, the mean absolute error, and the root mean square error were 0.0450, 0.5300, and 0.7193, respectively. It provides a new path for rapid estimation of the regional soil pH, which is important for improving the management of agricultural production and slowing down soil degradation.
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Affiliation(s)
- Xiansheng Xie
- Guangxi Geographical Indication Crops Research Center of Big Data Mining and Experimental Engineering Technology, Nanning Normal University, Nanning 530001, China
- Research Institute of Forestry Policy and Information, Chinese Academy of Forestry, Beijing 100091, China
| | - Jianfei Qiu
- Jilin Academy of Agricultural Sciences, Changchun 130033, China
| | - Xinxin Feng
- School of Geography and Planning, Nanning Normal University, Nanning 530001, China
| | - Yanlin Hou
- Guangxi Geographical Indication Crops Research Center of Big Data Mining and Experimental Engineering Technology, Nanning Normal University, Nanning 530001, China
- Key Laboratory of Environment Change and Resources Use in Beibu Gulf (Ministry of Education), Nanning Normal University, Nanning 530001, China
- Guangxi Key Laboratory of Earth Surface Processes and Intelligent Simulation, Nanning Normal University, Nanning 530001, China
| | - Shuojin Wang
- Guangxi Geographical Indication Crops Research Center of Big Data Mining and Experimental Engineering Technology, Nanning Normal University, Nanning 530001, China
- Key Laboratory of Environment Change and Resources Use in Beibu Gulf (Ministry of Education), Nanning Normal University, Nanning 530001, China
- Guangxi Key Laboratory of Earth Surface Processes and Intelligent Simulation, Nanning Normal University, Nanning 530001, China
| | - Shugang Jia
- Guangxi Geographical Indication Crops Research Center of Big Data Mining and Experimental Engineering Technology, Nanning Normal University, Nanning 530001, China
- Key Laboratory of Environment Change and Resources Use in Beibu Gulf (Ministry of Education), Nanning Normal University, Nanning 530001, China
- Guangxi Key Laboratory of Earth Surface Processes and Intelligent Simulation, Nanning Normal University, Nanning 530001, China
| | - Shutian Liu
- Guangxi Geographical Indication Crops Research Center of Big Data Mining and Experimental Engineering Technology, Nanning Normal University, Nanning 530001, China
- Key Laboratory of Environment Change and Resources Use in Beibu Gulf (Ministry of Education), Nanning Normal University, Nanning 530001, China
- Guangxi Key Laboratory of Earth Surface Processes and Intelligent Simulation, Nanning Normal University, Nanning 530001, China
| | - Xianda Hou
- Guangxi Geographical Indication Crops Research Center of Big Data Mining and Experimental Engineering Technology, Nanning Normal University, Nanning 530001, China
- Key Laboratory of Environment Change and Resources Use in Beibu Gulf (Ministry of Education), Nanning Normal University, Nanning 530001, China
- Guangxi Key Laboratory of Earth Surface Processes and Intelligent Simulation, Nanning Normal University, Nanning 530001, China
| | - Sen Dou
- College of Resource and Environmental Science, Jilin Agricultural University, Changchun 130118, China
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Zakavi M, Askari H, Shahrooei M. Bacterial diversity changes in response to an altitudinal gradient in arid and semi-arid regions and their effects on crops growth. Front Microbiol 2022; 13:984925. [PMID: 36312986 PMCID: PMC9614161 DOI: 10.3389/fmicb.2022.984925] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2022] [Accepted: 09/16/2022] [Indexed: 12/01/2023] Open
Abstract
The microbiome of soil has a fundamental role in maintaining the health of soil and plants. While the diversity of microbes is one of the most important factors in the environment, little is known about the effects of elevation on the microbiome and the impact of the affected microbiome on plants. The main goal of this study is to expand our knowledge of what happens to the soil bacterial community along an altitudinal gradient and investigate their possibly different impacts on plant growth. Bacteria from soils at various altitudes have been isolated, characterized, and identified by Matrix-Assisted Laser Desorption/Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) to determine the effects of an elevational gradient on the microbiome and plant growth. Furthermore, their effects have been investigated by isolates assessment on maize, wheat, and canola. Based on our results, higher altitude results in a higher diversity of the microbiome and lower bacteria biomass. Bacillus cereus is found in abundance in arid and semi-arid samples. Interestingly, enhanced diversity in higher altitudes shows similarity in response to environmental stress and tolerates these factors well. Furthermore, the inoculation of these bacteria could enhance the overall growth of plants. We prove that bacterial communities could change their biomass and diversity in response to altitude changes. These indicate evolutionary pressure as these bacteria could tolerate stress factors well and have a better relationship with plants.
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Affiliation(s)
- Maryam Zakavi
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Hossein Askari
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Mohammad Shahrooei
- Department of Microbiology and Immunology, Clinical and Diagnostic Immunology, KU Leuven, Leuven, Belgium
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De P, Deb S, Deb D, Chakraborty S, Santra P, Dutta P, Hoque A, Choudhury A. Soil quality under different land uses in eastern India: Evaluation by using soil indicators and quality index. PLoS One 2022; 17:e0275062. [PMID: 36137131 PMCID: PMC9499302 DOI: 10.1371/journal.pone.0275062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 09/09/2022] [Indexed: 12/05/2022] Open
Abstract
Indian soils are inherently poor in quality due to the warm climate and erosion. Conversion of land uses like forests to croplands and faulty management practices in croplands further cause soil degradation. This study aimed to understand the extent of these impacts in a small representative part of eastern India, covering Himalayan terai and nearing alluvial plains. Soils were collected from (i) forests, (ii) croplands (under agricultural practices for more than 50–60 years) and (iii) converted lands (converted from forests to croplands or tea gardens over the past 15–20 years). Different soil quality indicators were assessed and soil quality index (SQI) was generated to integrate, scale and allot a single value per soil. Results indicated that continuous organic matter deposition and no disturbances consequence the highest presence of soil carbon pools, greater aggregation and maximum microbial dynamics in forest soils whereas high application of straight fertilizers caused the highest available nitrogen and phosphorus in cropland soils. The SQI scorebook indicated the best soil quality under forests ( x¯ 0.532), followed by soils of converted land ( x¯ 0.432) and cropland ( x¯ 0.301). Comparison of the SQI spatial distribution with land use and land cover confirmed the outcome. Possibly practices like excessive tillage, high cropping intensity, no legume in crop rotations, cultivation of heavy feeder crops caused degraded soil quality in croplands. This study presented an example of soil quality degradation in India due to land use change and faulty management practices. Such soil degradation on a larger scale may affect future food security.
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Affiliation(s)
- Parijat De
- Uttar Banga Krishi Viswavidyalaya, Cooch Behar, India
| | - Shovik Deb
- Uttar Banga Krishi Viswavidyalaya, Cooch Behar, India
- * E-mail:
| | - Dibyendu Deb
- ICAR-Indian Agricultural Research Institute, Gogamukh, Assam, India
| | | | - Priyabrata Santra
- ICAR-Central Arid Zone Research Institute, Jodhpur, Rajasthan, India
| | | | - Anarul Hoque
- Uttar Banga Krishi Viswavidyalaya, Cooch Behar, India
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12
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Gupta G, Dhar S, Kumar A, Choudhary AK, Dass A, Sharma VK, Shukla L, Upadhyay PK, Das A, Jinger D, Rajpoot SK, Sannagoudar MS, Kumar A, Bhupenchandra I, Tyagi V, Joshi E, Kumar K, Dwivedi P, Rajawat MVS. Microbes-mediated integrated nutrient management for improved rhizo-modulation, pigeonpea productivity, and soil bio-fertility in a semi-arid agro-ecology. Front Microbiol 2022; 13:924407. [PMID: 36187978 PMCID: PMC9520524 DOI: 10.3389/fmicb.2022.924407] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Accepted: 06/28/2022] [Indexed: 11/21/2022] Open
Abstract
Excessive dependence on chemical fertilizers and ignorance to organic and microbial inputs under intensive cropping systems are the basic components of contemporary agriculture, which evolves several sustainability issues, such as degraded soil health and sub-optimal crop productivity. This scenario urges for integrated nutrient management approaches, such as microbes-mediated integrated plant nutrition for curtailing the high doses as chemical fertilizers. Rationally, experiment has been conducted in pigeonpea at ICAR-IARI, New Delhi, with the aim of identifying the appropriate nutrient management technique involving microbial and organic nutrient sources for improved rhizo-modulation, crop productivity, and soil bio-fertility. The randomized block-designed experiment consisted nine treatments viz. Control, Recommended dose of fertilizers (RDF), RDF+ Microbial inoculants (MI), Vermicompost (VC), Farm Yard Manure (FYM), Leaf Compost (LC), VC + MI, FYM + MI, and LC + MI. Rhizobium spp., Pseudomonas spp., Bacillus spp., and Frateuria aurantia were used as seed-inoculating microbes. The results indicated the significant response of integration following the trend VC + MI > FYM + MI > LC + MI > RDF + MI for various plant shoot-root growth attributes and soil microbial and enzymatic properties. FYM + MI significantly improved the water-stable aggregates (22%), mean weight diameter (1.13 mm), and geometric mean diameter (0.93 mm), soil organic carbon (SOC), SOC stock, and SOC sequestration. The chemical properties viz. available N, P, and K were significantly improved with VC + MI. The study summarizes that FYM + MI could result in better soil physico-chemical and biological properties and shoot-root development; however; VC + MI could improve available nutrients in the soil and may enhance the growth of pigeonpea more effectively. The outcomes of the study are postulated as a viable and alternative solution for excessive chemical fertilizer-based nutrient management and would also promote the microbial consortia and organic manures-based agro-industries. This would add to the goal of sustainable agricultural development by producing quality crop produce, maintaining agro-biodiversity and making the soils fertile and healthy that would be a “gift to the society.”
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Affiliation(s)
- Gaurendra Gupta
- Indian Grassland and Fodder Research Institute, Indian Council of Agricultural Research, Jhansi, India
| | - Shiva Dhar
- Division of Agronomy, Indian Agricultural Research Institute, Indian Council of Agricultural Research, New Delhi, India
- *Correspondence: Shiva Dhar,
| | - Adarsh Kumar
- National Bureau of Agriculturally Important Microorganisms, Indian Council of Agricultural Research, Mau, India
| | - Anil K. Choudhary
- Division of Agronomy, Indian Agricultural Research Institute, Indian Council of Agricultural Research, New Delhi, India
- Central Potato Research Institute, Indian Council of Agricultural Research, Shimla, India
| | - Anchal Dass
- Division of Agronomy, Indian Agricultural Research Institute, Indian Council of Agricultural Research, New Delhi, India
| | - V. K. Sharma
- Division of SSAC, Indian Agricultural Research Institute, Indian Council of Agricultural Research, New Delhi, India
| | - Livleen Shukla
- Division of Microbiology, Indian Agricultural Research Institute, Indian Council of Agricultural Research, New Delhi, India
| | - P. K. Upadhyay
- Division of Agronomy, Indian Agricultural Research Institute, Indian Council of Agricultural Research, New Delhi, India
| | - Anup Das
- Research Complex for NEH Region, Tripura Centre, Indian Council of Agricultural Research, Lembucherra, India
| | - Dinesh Jinger
- Indian Institute of Soil and Water Conservation, Research Centre, Indian Council of Agricultural Research, Vasad, India
| | | | | | - Amit Kumar
- ICAR RC for NEH Region, Sikkim Centre, Gangtok, India
| | - Ingudam Bhupenchandra
- ICAR–Krishi Vigyan Kendra, ICAR RC for NEH Region, Manipur Centre, Tamenglong, India
| | - Vishal Tyagi
- Indian Institute of Seed Science, Indian Council of Agricultural Research, Mau, India
| | - Ekta Joshi
- Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya, Gwalior, India
| | - Kamlesh Kumar
- Division of Agronomy, Indian Agricultural Research Institute, Indian Council of Agricultural Research, New Delhi, India
- Indian Institute of Farming Systems Research, Indian Council of Agricultural Research, Meerut, India
| | - Padmanabh Dwivedi
- Department of Plant Physiology, Institute of Agricultural Sciences, Banaras Hindu University, Varanasi, India
| | - Mahendra Vikram Singh Rajawat
- National Bureau of Agriculturally Important Microorganisms, Indian Council of Agricultural Research, Mau, India
- Mahendra Vikram Singh Rajawat,
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13
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Buckner MA, Danforth BN. Climate-driven range shifts of a rare specialist bee, Macropis nuda (Melittidae), and its host plant, Lysimachia ciliata (Primulaceae). Glob Ecol Conserv 2022. [DOI: 10.1016/j.gecco.2022.e02180] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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14
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Yang R, Wang Z, Fahad S, Geng S, Zhang C, Harrison MT, Adnan M, Saud S, Zhou M, Liu K, Wang X. Rice Paddies Reduce Subsequent Yields of Wheat Due to Physical and Chemical Soil Constraints. FRONTIERS IN PLANT SCIENCE 2022; 13:959784. [PMID: 35937355 PMCID: PMC9354814 DOI: 10.3389/fpls.2022.959784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/02/2022] [Accepted: 06/21/2022] [Indexed: 06/15/2023]
Abstract
Yields of wheat crops that succeed rice paddy crops are generally low. To date, it has been unclear whether such low yields were due to rice paddies altering soil physical or mineral characteristics, or both. To investigate this quandary, we conducted field experiments in the Jianghan Plain to analyze differences in the spatial distribution of wheat roots between rice-wheat rotation (RW) and dryland-wheat rotations (DW) using a range of nitrogen treatments. Dryland wheat crops were preceded by either dryland soybean or corn in the prior summer. Biomass of wheat crops in RW systems was significantly lower than that of DW for all N fertilizer treatments, although optimal nitrogen management resulted in comparable wheat yields in both DW and RW. Soil saturated water capacity and non-capillary porosity were higher in DW than RW, whereas soil bulk density was higher in RW. Soil available nitrogen and organic matter were higher in DW than RW irrespective of N application, while soil available P and K were higher under RW both at anthesis and post-harvest stages. At anthesis, root length percentage (RLP) was more concentrated in surface layers (0-20 cm) in RW, whereas at 20-40 cm and 40-60 cm, RLP was higher in DW than RW for all N treatments. At maturity, RLP were ranked 0-20 > 20-40 > 40-60 cm under both cropping systems irrespective of N fertilization. Root length percentage and soil chemical properties at 0-20 cm were positively correlated (r = 0.79 at anthesis, r = 0.68 at post-harvest) with soil available P, while available N (r = -0.59) and soil organic matter (r = -0.39) were negatively correlated with RLP at anthesis. Nitrogen applied at 180 kg ha-1 in three unform amounts of 60 kg N ha-1 at sowing, wintering and jointing resulted in higher yields than other treatments for both cropping systems. Overall, our results suggest that flooding of rice paddies increased bulk density and reduced available nitrogen, inhibiting the growth and yield of subsequent wheat crops relative to rainfed corn or soybean crops.
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Affiliation(s)
- Rui Yang
- Hubei Collaborative Innovation Center for Grain Industry, School of Agriculture, Yangtze University, Jingzhou, China
| | - Zhuangzhi Wang
- Hubei Collaborative Innovation Center for Grain Industry, School of Agriculture, Yangtze University, Jingzhou, China
| | - Shah Fahad
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, Hainan University, Haikou, China
- Department of Agronomy, Faculty of Agricultural Sciences, The University of Haripur, Haripur, Pakistan
| | - Shiying Geng
- College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Chengxiang Zhang
- Hubei Collaborative Innovation Center for Grain Industry, School of Agriculture, Yangtze University, Jingzhou, China
| | - Matthew Tom Harrison
- Tasmanian Institute of Agriculture, University of Tasmania, Launceston, TAS, Australia
| | - Muhammad Adnan
- Department of Agriculture, University of Swabi, Swabi, Pakistan
| | - Shah Saud
- College of Life Science, Linyi University, Linyi, China
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Launceston, TAS, Australia
| | - Ke Liu
- Hubei Collaborative Innovation Center for Grain Industry, School of Agriculture, Yangtze University, Jingzhou, China
- Tasmanian Institute of Agriculture, University of Tasmania, Launceston, TAS, Australia
| | - Xiaoyan Wang
- Hubei Collaborative Innovation Center for Grain Industry, School of Agriculture, Yangtze University, Jingzhou, China
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15
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Fu B, Horsburgh JS, Jakeman AJ, Gualtieri C, Arnold T, Marshall L, Green TR, Quinn NWT, Volk M, Hunt RJ, Vezzaro L, Croke BFW, Jakeman JD, Snow V, Rashleigh B. Modeling Water Quality in Watersheds: From Here to the Next Generation. WATER RESOURCES RESEARCH 2020; 56:10.1029/2020wr027721. [PMID: 33627891 PMCID: PMC7898158 DOI: 10.1029/2020wr027721] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2020] [Accepted: 10/21/2020] [Indexed: 05/19/2023]
Abstract
In this synthesis, we assess present research and anticipate future development needs in modeling water quality in watersheds. We first discuss areas of potential improvement in the representation of freshwater systems pertaining to water quality, including representation of environmental interfaces, in-stream water quality and process interactions, soil health and land management, and (peri-)urban areas. In addition, we provide insights into the contemporary challenges in the practices of watershed water quality modeling, including quality control of monitoring data, model parameterization and calibration, uncertainty management, scale mismatches, and provisioning of modeling tools. Finally, we make three recommendations to provide a path forward for improving watershed water quality modeling science, infrastructure, and practices. These include building stronger collaborations between experimentalists and modelers, bridging gaps between modelers and stakeholders, and cultivating and applying procedural knowledge to better govern and support water quality modeling processes within organizations.
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Affiliation(s)
- B. Fu
- Fenner School of Environment and Society and Institute for Water Futures, Australian National University, Canberra, ACT, Australia
| | - J. S. Horsburgh
- Department of Civil and Environmental Engineering and Utah Water Research Laboratory, Utah State University, Logan, UT, USA
| | - A. J. Jakeman
- Fenner School of Environment and Society and Institute for Water Futures, Australian National University, Canberra, ACT, Australia
| | - C. Gualtieri
- Department of Civil, Architectural and Environmental Engineering, University of Napoli Federico II, Naples, Italy
| | - T. Arnold
- Grey Bruce Centre for Agroecology, Allenford, Ontario, Canada
| | - L. Marshall
- Water Research Centre, School of Civil and Environmental Engineering, UNSW, Sydney, New South Wales, Australia
| | - T. R. Green
- Agricultural Research Service, U.S. Department of Agriculture, Fort Collins, CO, USA
| | - N. W. T. Quinn
- Lawrence Berkeley National Laboratory, Berkeley, CA, USA
| | - M. Volk
- Helmholtz Centre for Environmental Research—UFZ, Department of Computational Landscape Ecology, Leipzig, Germany
| | - R. J. Hunt
- Upper Midwest Water Science Center, United States Geological Survey, Middleton, WI, USA
| | - L. Vezzaro
- Department of Environmental Engineering (DTU Environment), Technical University of Denmark, Kongens Lyngby, Denmark
| | - B. F. W. Croke
- Fenner School of Environment and Society and Institute for Water Futures, Australian National University, Canberra, ACT, Australia
- Mathematical Sciences Institute, Australian National University, Canberra, ACT, Australia
| | - J. D. Jakeman
- Optimization and Uncertainty Quantification, Sandia National Laboratories, Albuquerque, NM, USA
| | - V. Snow
- AgResearch—Lincoln Research Centre, Christchurch, New Zealand
| | - B. Rashleigh
- Office of Research and Development, United States Environmental Protection Agency, Narragansett, RI, USA
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16
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Mendoza B, Béjar J, Luna D, Osorio M, Jimenez M, Melendez JR. Differences in the ratio of soil microbial biomass carbon (MBC) and soil organic carbon (SOC) at various altitudes of Hyperalic Alisol in the Amazon region of Ecuador. F1000Res 2020; 9:443. [PMID: 32551098 PMCID: PMC7281642 DOI: 10.12688/f1000research.22922.1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 05/14/2020] [Indexed: 11/20/2022] Open
Abstract
Protecting soil fertility represents a fundamental effort of sustainable development. In this study we investigate how different altitudes affect soil microbial biomass carbon (MBC) and soil organic carbon (SOC), and their ratio, MBC/SOC in Hyperalic Alisol. MBC and SOC are well established and widely accepted microbial quotients in soil science. Our work hypothesis was that a decrease in MBC and SOC should be observed at higher altitudes. This initial assumption has been verified by our measurements, being attributed to the increase in MBC and SOC at low altitudes. Our approach should contribute to the better understanding of MBC and SOC distribution in soil and changes in MBC/SOC at various altitudes in the region.
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Affiliation(s)
| | - Jaime Béjar
- Escuela Superior Politécnica de Chimborazo, Riobamba, Ecuador
| | - Daniel Luna
- Universidad Nacional de Chimborazo, Riobamba, Ecuador
| | - Miguel Osorio
- Escuela Superior Politécnica de Chimborazo, Riobamba, Ecuador
| | - Mauro Jimenez
- Universidad Nacional de Chimborazo, Riobamba, Ecuador
| | - Jesus R Melendez
- Facultad Educación Técnica para el Desarrollo, Universidad Católica de Santiago de Guayaquil, Guayaquil, Ecuador.,Dama Research Center limited, Kowloon, Hong Kong
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17
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Characterizing changes in soil microbiome abundance and diversity due to different cover crop techniques. PLoS One 2020; 15:e0232453. [PMID: 32369501 PMCID: PMC7199946 DOI: 10.1371/journal.pone.0232453] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2019] [Accepted: 04/15/2020] [Indexed: 02/07/2023] Open
Abstract
Soil-based microorganisms assume a direct and crucial role in the promotion of soil health, quality and fertility, all factors known to contribute heavily to the quality and yield of agricultural products. Cover cropping, used in both traditional and organic farming, is a particularly efficient and environmentally favorable tool for manipulating microbiome composition in agricultural soils and has had clear benefits for soil quality and crop output. Several long-term investigations have evaluated the influence of multi-mix (multiple species) cover crop treatments on soil health and microbial diversity. The present study investigated the short-term effects of a seven species multi-mix cover crop treatment on soil nutrient content and microbial diversity, compared to a single-mix cover crop treatment and control. Analysis of 16S sequencing data of isolated soil DNA revealed that the single-mix cover crop treatment decreased overall microbial abundance and diversity, whereas the control and multi-mix treatments altered the overall microbial composition in similar fluctuating trends. Furthermore, we observed significant changes in specific bacteria belonging to the phyla Acidobacteria, Actinobacteria, Planctomycetes, Proteobacteria and Verrucombicrobia for all treatments, but only the single-mix significantly decreased in abundance of the selected bacteria over time. Our findings indicate that the control and multi-mix treatments are better at maintaining overall microbial composition and diversity compared to the single-mix. Further study is required to elucidate the specific difference between the treatment effect of the multi-mix treatment and the control, given that their microbial composition changes over time were similar but they diverge into two populations of unique bacterial types by the end of this short-term study.
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18
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Denney DA, Jameel MI, Bemmels JB, Rochford ME, Anderson JT. Small spaces, big impacts: contributions of micro-environmental variation to population persistence under climate change. AOB PLANTS 2020; 12:plaa005. [PMID: 32211145 PMCID: PMC7082537 DOI: 10.1093/aobpla/plaa005] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2019] [Accepted: 02/06/2020] [Indexed: 05/05/2023]
Abstract
Individuals within natural populations can experience very different abiotic and biotic conditions across small spatial scales owing to microtopography and other micro-environmental gradients. Ecological and evolutionary studies often ignore the effects of micro-environment on plant population and community dynamics. Here, we explore the extent to which fine-grained variation in abiotic and biotic conditions contributes to within-population variation in trait expression and genetic diversity in natural plant populations. Furthermore, we consider whether benign microhabitats could buffer local populations of some plant species from abiotic stresses imposed by rapid anthropogenic climate change. If microrefugia sustain local populations and communities in the short term, other eco-evolutionary processes, such as gene flow and adaptation, could enhance population stability in the longer term. We caution, however, that local populations may still decline in size as they contract into rare microhabitats and microrefugia. We encourage future research that explicitly examines the role of the micro-environment in maintaining genetic variation within local populations, favouring the evolution of phenotypic plasticity at local scales and enhancing population persistence under global change.
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Affiliation(s)
- Derek A Denney
- Department of Plant Biology, University of Georgia, Athens, GA, USA
| | - M Inam Jameel
- Department of Genetics, University of Georgia, Athens, GA, USA
| | - Jordan B Bemmels
- Department of Genetics, University of Georgia, Athens, GA, USA
- Department of Biological Sciences, University of Toronto Scarborough, Toronto, ON, Canada
| | - Mia E Rochford
- Department of Plant Biology, University of Georgia, Athens, GA, USA
| | - Jill T Anderson
- Department of Genetics, University of Georgia, Athens, GA, USA
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19
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Rodriguez A, Lemos D, Trujillo YT, Amaya JG, Ramos LD. Effectiveness of Biochar Obtained from Corncob for Immobilization of Lead in Contaminated Soil. J Health Pollut 2019; 9:190907. [PMID: 31497370 PMCID: PMC6711329 DOI: 10.5696/2156-9614-9.23.190907] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2019] [Accepted: 06/18/2019] [Indexed: 06/10/2023]
Abstract
BACKGROUND Recent studies have explored the potential for using biochar as a soil amendment in agriculture. However, it can also be used as a gentle remediation option for contaminant reduction. Biochar is a by-product obtained from the pyrolysis of biomass (organic matter). It is known for its long-lasting chemical properties, wide surface area values, and carbon-richness, which make it an efficient method for the immobilization of organic and inorganic contaminants such as heavy metals. OBJECTIVE The aim of the present study was to analyze the efficiency of biochar, obtained from the gasification of corncob, for the immobilization of lead in contaminated soils. METHODS In the present study, biochar from corncob was used as an amendment for soil contaminated with lead (extracted from the municipality of Malambo, Colombia) in order to estimate its ability to immobilize leaching lead. A comparison laboratory test applied a modified biochar produced with a 10% hydrogen peroxide chemical treatment. In addition, a pot experiment was done with both biochar by sowing seeds of Pennisetum clandestinum for 33 days. During this period, plant growth was measured for the different amendments of biochar concentrations. RESULTS Laboratory tests indicated that unmodified biochar obtained a maximum retention of 61.46% of lead, while the modified biochar obtained only 44.53% retention. In the pot experiments, the modified biochar indicated high germination and growth of seeds (up to 89.8%). CONCLUSIONS Although the lead immobilization in soil was positive for both cases, the use of soil with high concentrations of lead (167.62 g/kg) does not indicate biochar's effectiveness for purposes of comparison with the current United States Environmental Protection Agency (USEPA) limit value (400 ppm for bare soil in urban play areas). Therefore, further studies are recommended using soil with lower lead concentration levels. COMPETING INTERESTS The authors declare no competing financial interests. One author is an employee of Pure Earth.
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Affiliation(s)
- Alfonso Rodriguez
- Universidad de la Sabana, Cundinamarca, Colombia
- Pure Earth, New York, NY
- R3 Environmental Technology Colombia, SAS, Bogota, Colombia
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20
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Kaur H, Huggins DR, Rupp RA, Abatzoglou JT, Stöckle CO, Reganold JP. Agro-Ecological Class Stability Decreases in Response to Climate Change Projections for the Pacific Northwest, USA. Front Ecol Evol 2017. [DOI: 10.3389/fevo.2017.00074] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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21
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Chakraborty K, Bhaduri D, Uprety DC, Patra AK. Differential Response of Plant and Soil Processes Under Climate Change: A Mini-review on Recent Understandings. ACTA ACUST UNITED AC 2013. [DOI: 10.1007/s40011-013-0221-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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