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Daronnat L, Holfeltz V, Boubals N, Dumas T, Guilbaud P, Martinez DM, Moisy P, Sauge-Merle S, Lemaire D, Solari PL, Berthon L, Berthomieu C. Investigation of the Plutonium(IV) Interactions with Two Variants of the EF-Hand Ca-Binding Site I of Calmodulin. Inorg Chem 2023; 62:8334-8346. [PMID: 37184364 DOI: 10.1021/acs.inorgchem.3c00845] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Due to its presence in the nuclear industry and its strong radiotoxicity, plutonium is an actinide of major interest in the event of internal contamination. To improve the understanding of its mechanisms of transport and accumulation in the body, the complexation of Pu(IV) to the most common protein calcium-binding motif found in cells, the EF-hand motif of calmodulin, was investigated. Visible and X-ray absorption spectroscopies (XAS) in solution made it possible to investigate the speciation of plutonium at physiological pH (pH 7.4) and pH 6 in two variants of the calmodulin Ca-binding site I and using Pu(IV) in different media: carbonate, chloride, or nitrate solutions. Three different species of Pu were identified in the samples, with formation of 1:1 Pu(IV):calmodulin peptide complexes, Pu(IV) reduction, and formation of peptide-mediated Pu(IV) hexanuclear cluster.
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Affiliation(s)
- Loïc Daronnat
- CEA, DES, ISEC, DMRC, Univ Montpellier, Marcoule, Bagnols-sur-cèze 30200, France
| | - Vanessa Holfeltz
- CEA, DES, ISEC, DMRC, Univ Montpellier, Marcoule, Bagnols-sur-cèze 30200, France
| | - Nathalie Boubals
- CEA, DES, ISEC, DMRC, Univ Montpellier, Marcoule, Bagnols-sur-cèze 30200, France
| | - Thomas Dumas
- CEA, DES, ISEC, DMRC, Univ Montpellier, Marcoule, Bagnols-sur-cèze 30200, France
| | - Philippe Guilbaud
- CEA, DES, ISEC, DMRC, Univ Montpellier, Marcoule, Bagnols-sur-cèze 30200, France
| | | | - Philippe Moisy
- CEA, DES, ISEC, DMRC, Univ Montpellier, Marcoule, Bagnols-sur-cèze 30200, France
| | - Sandrine Sauge-Merle
- Aix Marseille Université, CEA, CNRS, BIAM, UMR7265, IPM, Saint Paul-Lez-Durance 13108, France
| | - David Lemaire
- Aix Marseille Université, CEA, CNRS, BIAM, UMR7265, IPM, Saint Paul-Lez-Durance 13108, France
| | - Pier Lorenzo Solari
- Synchrotron SOLEIL, L'Orme des Merisiers, Départementale 128, Saint Aubin 91190, France
| | - Laurence Berthon
- CEA, DES, ISEC, DMRC, Univ Montpellier, Marcoule, Bagnols-sur-cèze 30200, France
| | - Catherine Berthomieu
- Aix Marseille Université, CEA, CNRS, BIAM, UMR7265, IPM, Saint Paul-Lez-Durance 13108, France
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Facts and conjectures on calmodulin and its cousin proteins, parvalbumin and troponin C. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2019; 1866:1046-1053. [PMID: 30716407 DOI: 10.1016/j.bbamcr.2019.01.014] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2018] [Revised: 01/23/2019] [Accepted: 01/24/2019] [Indexed: 02/07/2023]
Abstract
This review aims at giving a rational frame to understand the diversity of EF hand containing calcium binding proteins and their roles, with special focus on three members of this huge protein family, namely calmodulin, troponin C and parvalbumin. We propose that these proteins are members of structured macromolecular complexes, termed calcisomes, which constitute building devices allowing treatment of information within eukaryotic cells and namely calcium signals encoding and decoding, as well as control of cytosolic calcium levels in resting cells. Calmodulin is ubiquitous, present in all eukaryotic cells, and pleiotropic. This may be explained by its prominent role in regulating calcium movement in and out of the cell, thus maintaining calcium homeostasis which is fundamental for cell survival. The protein is further involved in decoding transient calcium signals associated with calcium movements after cell stimulation. We will show that the specificity of calmodulin's actions may be more easily explained if one considers its role in the light of calcisomes. Parvalbumin should not be considered as a simple intracellular calcium buffer. It is also a key factor for regulating calcium homeostasis in specific cells that need a rapid retrocontrol of calcium transients, such as fast muscle fibers. Finally, we propose that troponin C, with its four calcium binding domains distributed between two lobes presenting different calcium binding kinetics, exhibits all the characteristics needed to trigger and then post modulate muscle contraction and thus appears as a typical Feed Forward Loop system. If the present conjectures prove accurate, the way will be paved for a new pharmacology targeting the cell calcium signaling machinery. This article is part of a Special Issue entitled: ECS Meeting edited by Claus Heizmann, Joachim Krebs and Jacques Haiech.
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Haiech J, Gendrault Y, Kilhoffer MC, Ranjeva R, Madec M, Lallement C. A general framework improving teaching ligand binding to a macromolecule. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2014; 1843:2348-55. [PMID: 24657812 DOI: 10.1016/j.bbamcr.2014.03.013] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2014] [Revised: 03/10/2014] [Accepted: 03/13/2014] [Indexed: 10/25/2022]
Abstract
The interaction of a ligand with a macromolecule has been modeled following different theories. The tenants of the induced fit model consider that upon ligand binding, the protein-ligand complex undergoes a conformational change. In contrast, the allosteric model assumes that only one among different coexisting conformers of a given protein is suitable to bind the ligand optimally. In the present paper, we propose a general framework to model the binding of ligands to a macromolecule. Such framework built on the binding polynomial allows opening new ways to teach in a unified manner ligand binding, enzymology and receptor binding in pharmacology. Moreover, we have developed simple software that allows building the binding polynomial from the schematic description of the biological system under study. Taking calmodulin as a canonical example, we show here that the proposed tool allows the easy retrieval of previously experimental and computational reports. This article is part of a Special Issue entitled: Calcium Signaling in Health and Disease. Guest Editors: Geert Bultynck, Jacques Haiech, Claus W. Heizmann, Joachim Krebs, and Marc Moreau.
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Affiliation(s)
- Jacques Haiech
- LIT, Therapeutic Innovation Laboratory, UMR7200 CNRS, University of Strasbourg, Faculty of Pharmacy, Illkirch, France.
| | - Yves Gendrault
- ICube, Engineering, Computer and Imaging Science Laboratory, UMR7357 CNRS, University of Strasbourg, Telecom - Strasbourg, France
| | - Marie-Claude Kilhoffer
- LIT, Therapeutic Innovation Laboratory, UMR7200 CNRS, University of Strasbourg, Faculty of Pharmacy, Illkirch, France
| | - Raoul Ranjeva
- LIT, Therapeutic Innovation Laboratory, UMR7200 CNRS, University of Strasbourg, Faculty of Pharmacy, Illkirch, France
| | - Morgan Madec
- ICube, Engineering, Computer and Imaging Science Laboratory, UMR7357 CNRS, University of Strasbourg, Telecom - Strasbourg, France
| | - Christophe Lallement
- ICube, Engineering, Computer and Imaging Science Laboratory, UMR7357 CNRS, University of Strasbourg, Telecom - Strasbourg, France
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Characterization of cDNAs for calmodulin and calmodulin-like protein in the freshwater mussel Hyriopsis cumingii: differential expression in response to environmental Ca(2+) and calcium binding of recombinant proteins. Comp Biochem Physiol B Biochem Mol Biol 2013; 165:165-71. [PMID: 23603560 DOI: 10.1016/j.cbpb.2013.04.003] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2013] [Revised: 04/12/2013] [Accepted: 04/13/2013] [Indexed: 11/20/2022]
Abstract
Calmodulin and calmodulin-like protein are two crucial calcium regulators in bivalves. However, molecular characteristics and expression patterns of these genes in the freshwater mussel are poorly understood. In this study, two cDNAs encoding novel calmodulin and calmodulin-like protein (HcCaM and HcCaLP) were cloned and characterized from the freshwater pearl mussel Hyriopsis cumingii. The full-length cDNA of HcCaM was 726 bp, including a 118-bp 5'-untranslated region (UTR), a 447-bp open reading frame (ORF), and a 161-bp 3'-UTR. The 1217-bp HcCaLP cDNA comprised of a 51-bp 5'-UTR, a 447-bp ORF, and a 716-bp 3'-UTR. The potential phosphorylation sites of, Arg(80) and Phe(100) in deduced HcCaM were mutated to Thr(80) and Tyr(100) in HcCaLP. Tissue-specific expression analysis revealed that HcCaM mRNA was prominently expressed in the gill, mantle center, and foot. In contrast, HcCaLP mRNA was mainly expressed in the mantle edge. The recombinant HcCaM and HcCaLP proteins expressed in Escherichia coli showed the typical Ca(2+) dependent electrophoretic shift characterization as CaM and differed in the calcium binding affinity. The calcium stimulation test that lasted 5 weeks implied that HcCaM and HcCaLP had differential expression patterns in response to various environmental Ca(2+) concentrations (0.25-1.25 mM). The expression of HcCaM mRNA was up-regulated by low Ca(2+) concentration (0.25 mM), and the highest expression of HcCaLP mRNA occurred under Ca(2+) concentration of 1 mM.
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Affiliation(s)
- Kasper P Kepp
- DTU Chemistry, Technical University of Denmark, DK 2800 Kongens Lyngby, Denmark.
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de Groot T, Lee K, Langeslag M, Xi Q, Jalink K, Bindels RJM, Hoenderop JGJ. Parathyroid hormone activates TRPV5 via PKA-dependent phosphorylation. J Am Soc Nephrol 2009; 20:1693-704. [PMID: 19423690 DOI: 10.1681/asn.2008080873] [Citation(s) in RCA: 124] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022] Open
Abstract
Low extracellular calcium (Ca(2+)) promotes release of parathyroid hormone (PTH), which acts on multiple organs to maintain overall Ca(2+) balance. In the distal part of the nephron, PTH stimulates active Ca(2+) reabsorption via the adenylyl cyclase-cAMP-protein kinase A (PKA) pathway, but the molecular target of this pathway is unknown. The transient receptor potential vanilloid 5 (TRPV5) channel constitutes the luminal gate for Ca(2+) entry in the distal convoluted tubule and has several putative PKA phosphorylation sites. Here, we investigated the effect of PTH-induced cAMP signaling on TRPV5 activity. Using fluorescence resonance energy transfer, we studied cAMP and Ca(2+) dynamics during PTH stimulation of HEK293 cells that coexpressed the PTH receptor and TRPV5. PTH increased cAMP levels, followed by a rise in TRPV5-mediated Ca(2+) influx. PTH (1 to 31) and forskolin, which activate the cAMP pathway, mimicked the stimulation of TRPV5 activity. Remarkably, TRPV5 activation was limited to conditions of strong intracellular Ca(2+) buffering. Cell surface biotinylation studies demonstrated that forskolin did not affect TRPV5 expression on the cell surface, suggesting that it alters the single-channel activity of a fixed number of TRPV5 channels. Application of the PKA catalytic subunit, which phosphorylated TRPV5, directly increased TRPV5 channel open probability. Alanine substitution of threonine-709 abolished both in vitro phosphorylation and PTH-mediated stimulation of TRPV5. In summary, PTH activates the cAMP-PKA signaling cascade, which rapidly phosphorylates threonine-709 of TRPV5, increasing the channel's open probability and promoting Ca(2+) reabsorption in the distal nephron.
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Affiliation(s)
- Theun de Groot
- Department of Physiology, Radboud University Nijmegen Medical Centre, Nijmegen, Netherlands
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Haiech J, Moulhaye SBM, Kilhoffer MC. The EF-Handome: combining comparative genomic study using FamDBtool, a new bioinformatics tool, and the network of expertise of the European Calcium Society. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2005; 1742:179-83. [PMID: 15590068 DOI: 10.1016/j.bbamcr.2004.10.001] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2004] [Revised: 10/01/2004] [Accepted: 10/04/2004] [Indexed: 11/20/2022]
Abstract
By combining a bioinformatics tool (FamDBTool) and the expertise of a network of calcium binding proteins specialists (European Calcium Society), we aim to accelerate and to rationalize the curation of the public general biological database such as Swissprot and Entrez Gene with respect to specific protein families. In this paper, we show the feasibility of such rationale in order to set and to curate the human, mouse and rat sets of EF-Hand genes, the EF-Handome.
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Affiliation(s)
- Jacques Haiech
- UMR 7034 CNRS and IFR 85 Gilbert Laustriat, 74, route du Rhin, 67401 ILLKIRCH France.
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Gilli R, Lafitte D, Lopez C, Kilhoffer M, Makarov A, Briand C, Haiech J. Thermodynamic analysis of calcium and magnesium binding to calmodulin. Biochemistry 1998; 37:5450-6. [PMID: 9548926 DOI: 10.1021/bi972083a] [Citation(s) in RCA: 104] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
To elucidate some aspects still debated concerning the interaction of Ca2+ and Mg2+ with CaM, the thermodynamic binding parameters of Ca2+-CaM and Mg2+-CaM complexes were characterized by flow dialysis and isothermal microcalorimetry under different experimental conditions. In particular, the enthalpy and entropy changes associated with Ca2+ and Mg2+ binding to their sites were determined, allowing a better understanding of the mechanism underlying cation-CaM interactions. Ca2+-CaM interaction follows an enthalpy-entropy compensation relationship, suggesting that CaM explores a subspace of isoenergetical conformations which is modified by Ca2+ binding. This Ca2+-induced change in CaM dynamics is proposed to play a key role in CaM function, i.e. in its interaction with and/or activation of target proteins. Furthermore, data show that Mg2+ does not act as a direct competitor for Ca2+ binding on the four main Ca2+ binding sites, but rather as an allosteric effector. This implies that the four main Mg2+ binding sites are distinct from the EF-hand Ca2+ binding sites. Finally, Ca2+ is shown to interact with auxiliary binding sites on CaM. These weak affinity sites were thermodynamically characterized. The results presented here challenge the current accepted view of CaM ion binding.
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Affiliation(s)
- R Gilli
- Faculté de Pharmacie, UPRESA CNRS 6032, Marseille, France
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Nakatani K, Koutalos Y, Yau KW. Ca2+ modulation of the cGMP-gated channel of bullfrog retinal rod photoreceptors. J Physiol 1995; 484 ( Pt 1):69-76. [PMID: 7541463 PMCID: PMC1157922 DOI: 10.1113/jphysiol.1995.sp020648] [Citation(s) in RCA: 117] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
Abstract
1. The outer segment of an isolated rod photoreceptor from the bullfrog retina was drawn into a pipette containing choline solution for recording membrane current. The rest of the cell was sheared off with a glass probe to allow internal dialysis of the outer segment with a bath potassium solution ('truncated rod outer segment' preparation). The potential between the inside and the outside of the pipette was held at 0 mV. 2. Application of bath cGMP, in the presence of 3-isobutyl-1-methylxanthine (IBMX), gave rise to an outward membrane current. At saturating cGMP concentrations, this current was insensitive to intracellular Ca2+ at concentrations between 0 and 10 microM. At subsaturating cGMP concentrations, however, this current was inhibited by intracellular Ca2+. This sensitivity to Ca2+ declined after dialysis with a low-Ca2+ solution, suggesting the involvement of a soluble factor. 3. At low (nominally 0) Ca2+, the half-maximal activation constant and Hill coefficient for the activation of the cGMP-gated current by cGMP were 27 microM and 2.0, respectively. At high (ca 10 microM) Ca2+, the corresponding values were 40 microM cGMP and 2.4. 4. The inhibition of the current by Ca2+ was characterized at 20 microM cGMP. Ca2+ inhibited the current by up to 60%, with half-maximal inhibition at 48 nM Ca2+ and a Hill coefficient of 1.6.
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Affiliation(s)
- K Nakatani
- Institute of Biological Sciences, University of Tsukuba, Ibaraki, Japan
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Romano P, Suzzi G, Vannini L. Relationship between foaming and flocculence in Saccharomyces cerevisiae wine yeasts. Colloids Surf B Biointerfaces 1994. [DOI: 10.1016/0927-7765(94)80059-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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11
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Barras F, Kilhoffer MC, Bortoli-German I, Haiech J. Microbial and genetic approaches to the study of structure-function relationships of proteins. PROGRESS IN MOLECULAR AND SUBCELLULAR BIOLOGY 1994; 13:81-99. [PMID: 8162233 DOI: 10.1007/978-3-642-78581-8_2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- F Barras
- Department of Molecular Microbiology LCB-CNRS, Marseille, France
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12
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Kinetic analysis of secretion from permeabilized adrenal chromaffin cells reveals distinct components. J Biol Chem 1992. [DOI: 10.1016/s0021-9258(18)41988-6] [Citation(s) in RCA: 152] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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13
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Mely Y, Gerard D. Structural and ion-binding properties of an S100b protein mixed disulfide: comparison with the reappraised native S100b protein properties. Arch Biochem Biophys 1990; 279:174-82. [PMID: 2337349 DOI: 10.1016/0003-9861(90)90478-h] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
S100b protein, chemically modified by thioethanol groups (linked via disulfide bonds to two out of four Cys per dimer) was largely similar to reduced native S100b protein in its overall structure and differed only by small modifications extending, however, to the whole protein structure. Studies combining direct Ca2+ binding and associated conformational changes revealed that this chemical modification markedly increased the Ca2(+)-binding affinities (especially in the presence of physiological concentrations of K+ and Mg2+) and introduced a strong positive cooperativity. Different binding models are discussed and it emerges that in both proteins the Ca2(+)-binding sites are not equivalent and probably interact. Like the reduced protein, chemically modified S100b protein binds four Zn2+ ions in two classes of sites (of high and low affinities). Whereas the overall Zn2+ affinity was only slightly decreased, the binding sequence was probably reversed by the introduction of thioethanol groups. Moreover, in the presence of zinc, the Ca2+ affinities were higher and even identical, in both proteins.
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Affiliation(s)
- Y Mely
- Université Louis Pasteur, UA CNRS 491, Faculté de Pharmacie de Strasbourg, Illkirch, France
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Milos M, Comte M, Schaer JJ, Cox JA. Evidence for four capital and six auxiliary cation-binding sites on calmodulin: divalent cation interactions monitored by direct binding and microcalorimetry. J Inorg Biochem 1989; 36:11-25. [PMID: 2746218 DOI: 10.1016/0162-0134(89)80009-1] [Citation(s) in RCA: 30] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Recently, Mills and Johnson [7] and our group [9] provided evidence that calmodulin contains, in addition to the four Ca2+-binding sites (capital sites), which are essential for drug- and enzyme-binding, a number of divalent cation-binding sites of different ion selectivity (auxiliary sites), which modulate drug-binding as well as the affinity of Ca2+ for the capital sites. In the present study, the number of auxiliary sites and their relationship to the capital sites were determined by equilibrium gel filtration and by flow microcalorimetry with Zn2+ and Mn2+ as selective probes for the auxiliary sites and with Cd2+ as a probe for both types of sites. In the absence of other divalent cations, 6 mol of Zn2+ bind to calmodulin with an identical affinity constant of 2,850 M-1 and a delta H0 of 106 kJ/mol calmodulin. In the presence of millimolar free Ca2+ calmodulin binds, in addition to four Ca2+, six Zn2+ with an affinity constant of 1,200 M-1 and a delta H0 of 47 kJ/mol calmodulin. The Zn2+-Ca2+ antagonism is governed by negative free energy coupling between the capital and auxiliary sites. In contrast, the Zn2+-Mg2+ antagonism follows the rule of straight competition at all six auxiliary sites. Mn2+ also binds exclusively to the auxiliary sites with affinity constants of 800 or 280 M-1 and delta H0 of 45 or 46 kJ/mol calmodulin in the absence and presence of saturating [Ca2+], respectively. Cd2+ binds to the capital sites with an affinity constant of 3.4 10(4) M-1 (delta H = 35 kJ/mol calmodulin) and to the auxiliary sites with ca. 100-fold lower affinity. The Zn2+ much greater than Mn2+ greater than or equal to Cd2+ greater than Mg2+ selectivity of the auxiliary sites corroborates the potencies of these cations in modulating drug binding. The auxiliary site-specific cations are unable to promote high-affinity complex formation between calmodulin and melittin.
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Affiliation(s)
- M Milos
- Department of Physical Chemistry, University of Geneva, Switzerland
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15
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Ambudkar IS, Horn VJ, Baum BJ. ATP-dependent Ca2+ transport in the rat parotid basolateral plasma membrane is regulated by calmodulin. Arch Biochem Biophys 1989; 268:576-84. [PMID: 2492420 DOI: 10.1016/0003-9861(89)90325-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Calmodulin regulation of ATP-dependent Ca2+ transport activity was assessed in inverted basolateral plasma membrane vesicles (BLMV) isolated from rat parotid glands. The initial rate of Ca2+ transport in media containing 100 nM Ca2+ was stimulated by approximately 60% at maximal concentrations (300 nM) of exogenously added calmodulin (CAM). Half-maximal activation was obtained at 50 and 175 nM CAM in KCl and mannitol containing assay media, respectively. In the KCl medium, addition of 300 nM CAM increased the affinity of the BLMV Ca2+ transport activity for Ca2+ from approximately 70 nM, in the absence of added CAM, to approximately 50 nM. Vmax was consistently increased by approximately 20% under these conditions. When BLMV were treated with ethylene glycol bis(beta-aminoethylether) N,N'-tetraacetic acid (EGTA) (200 microM), the affinity of the transporter for Ca2+ decreased by 50% to approximately 150 nM, with no change in Vmax. When CAM was added to the EGTA-treated membranes, Ca2+ transport activity was comparable to that obtained when CAM was added directly to control, untreated BLMV. The CAM antagonists, trifluoperazine (TFP), W-7, and calmidazolium, inhibited Ca2+ transport in the presence of CAM. Half-maximal inhibition of transport was achieved by 12 microM TFP and 20 microM W-7. Calmidazolium (1 microM) inhibited Ca2+ transport by 75%. The inhibitory effects on ATP-dependent Ca2+ transport exerted by these agents were not due to an increase in the passive permeability of the membranes to Ca2+. Furthermore, in the absence of added CAM, the inhibitory effects of these agents on initial Ca2+ transport rate was decreased. The data presented suggest that the Ca2+-dependent interaction of CAM with the ATP-dependent Ca2+ transporter in rat parotid BLMV modifies the kinetic properties of this Ca2+ transporting mechanism.
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Affiliation(s)
- I S Ambudkar
- Clinical Investigations and Patient Care Branch, National Institute of Dental Research, Bethesda, Maryland 20892
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16
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Zimmer WE, Schloss JA, Silflow CD, Youngblom J, Watterson DM. Structural organization, DNA sequence, and expression of the calmodulin gene. J Biol Chem 1988. [DOI: 10.1016/s0021-9258(19)77643-1] [Citation(s) in RCA: 70] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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17
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Investigation of the mechanism of calcium binding to calmodulin. Use of an isofunctional mutant with a tryptophan introduced by site-directed mutagenesis. J Biol Chem 1988. [DOI: 10.1016/s0021-9258(18)37492-1] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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18
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Dieter P, Schulze-Specking A, Decker K. Ca2+ requirement of prostanoid but not of superoxide production by rat Kupffer cells. EUROPEAN JOURNAL OF BIOCHEMISTRY 1988; 177:61-7. [PMID: 2846298 DOI: 10.1111/j.1432-1033.1988.tb14345.x] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
The release of the prostanoids prostaglandin D2 (PGD2), prostaglandin E2 (PGE2) and thromboxane induced by zymosan and phorbol ester in cultured rat Kupffer cells was found to depend on the extracellular concentration of Ca2+ to some extent. Prostanoid formation following the addition of the calcium ionophore A 23187 was totally inhibited when calcium ions were withdrawn from the medium whereas the prostanoid synthesis from added arachidonic acid was independent of Ca2+. A half-maximal rate of PGE2 release by cells treated with zymosan, phorbol ester or A23187 was obtained at 0.6-0.7 microM free extracellular Ca2+ and greater than or equal to 100 microM free Ca2+ was required to stimulate PGE2 formation maximally. The calmodulin antagonist R24571 partially inhibited the release of PGE2 elicited by zymosan and A23187 but not by phorbol ester or arachidonic acid. Verapamil and nifedipine, two calcium channel blockers, had no effect on the formation of PGE2 irrespective of the stimulus. TMB 8 [3,4,5-trimethoxybenzoic acid 8-(diethylamino)-octyl ester] an intracellular calcium antagonist, inhibited the synthesis of PGE2 induced by zymosan and phorbol ester. The superoxide formation following the addition of zymosan and phorbol ester was not influenced by removal of calcium ions from the medium or by addition of the various calcium antagonists. The data presented here suggest that Ca2+-dependent reactions are involved in the synthesis of prostanoids induced by zymosan and phorbol ester and that both extracellular Ca2+ and mobilization of Ca2+ from intracellular stores are needed to induce maximally the production of prostanoids in cultured rat Kupffer cells.
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Affiliation(s)
- P Dieter
- Biochemisches Institut, Universität Freiburg im Breisgau, Federal Republic of Germany
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20
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Affiliation(s)
- J A Cox
- Department of Biochemistry, University of Geneva, Switzerland
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Haiech J, Watterson DM. Site-Specific Mutagenesis and Protein Engineering Approach to the Molecular Mechanism of Calcium Signal Transduction by Calmodulin. PROCEEDINGS IN LIFE SCIENCES 1988. [DOI: 10.1007/978-3-642-73042-9_14] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
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Mangelsdorf DJ, Komm BS, McDonnell DP, Pike JW, Haussler MR. Immunoselection of cDNAs to avian intestinal calcium binding protein 28K and a novel calmodulin-like protein: assessment of mRNA regulation by the vitamin D hormone. Biochemistry 1987; 26:8332-8. [PMID: 3442659 DOI: 10.1021/bi00399a046] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Calcium's role in a variety of cellular processes has been well documented. The storage, distribution, and delivery of calcium are regulated by a family of binding proteins including troponin C, calmodulin, parvalbumin, and vitamin D dependent calcium binding protein (CaBP-28), all of which have evolved from a common ancestral gene. To evaluate vitamin D regulation of gene transcription, a CaBP-28 cDNA (767 base pairs) was isolated from a chicken intestine lambda gt11 library utilizing a polyvalent CaBP-28 antibody as a probe. Coincident with the identification of the CaBP-28 cDNA, a group of cDNAs also was isolated (with the anti-CaBP-28 antibody) that demonstrated 84% nucleotide homology and 99% deduced amino acid homology with chicken brain calmodulin (CaM). This new CaM-like cDNA was named neoCaM. There is little nucleotide homology between the CaBP-28 cDNA and neoCaM. The CaBP-28 cDNA hybridizes with three transcripts of 2000, 2900, and 3300 bases which are dramatically induced by 1,25-dihydroxyvitamin D3 [1,25(OH)2D3], while the neoCaM cDNA recognizes three distinct (from CaBP-28) transcripts. Two of these mRNAs are 1400 and 1800 bases as described for brain CaM, but another larger 4000-base transcript is detected with neoCaM. Neither the CaM nor the neoCaM transcript reveals any modulation by 1,25(OH)2D3. Herein, we discuss the possible significance of not only the isolation of both cDNAs with a single antibody but also the relation of neoCaM to other well-characterized CaM cDNAs.
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Affiliation(s)
- D J Mangelsdorf
- Department of Biochemistry, University of Arizona, Tucson 85724
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23
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Lefebvre S, Mushynski WE. Calcium binding to untreated and dephosphorylated porcine neurofilaments. Biochem Biophys Res Commun 1987; 145:1006-11. [PMID: 3606591 DOI: 10.1016/0006-291x(87)91535-x] [Citation(s) in RCA: 32] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
The calcium-binding properties of untreated and in vitro dephosphorylated neurofilaments were determined by partition centrifugation. Scatchard plot analysis of the binding data indicated that each type of neurofilament contained both high and low affinity calcium-binding sites. The number of calcium-binding sites per unit consisting of three 140,000, three 107,000 and eight 62,000 molecular weight subunits was 4 sites with Kd = 4.1 microM and 126 sites with Kd = 293 microM for untreated neurofilaments. The in vitro dephosphorylated neurofilaments contained 8 sites with Kd = 15 microM and 54 sites with Kd = 332 microM, per unit.
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24
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Abstract
Calmodulin levels were measured in Zajdela hepatoma cells growing both in vivo and in culture, with respect to the distribution of the cells into G1 and S+G2 phases of the cell cycle and growth conditions. These levels, expressed on a per-microgram of protein basis, were significantly elevated at the G1-S boundary and maintained throughout the remainder of the cell cycle. This elevation of calmodulin took place independently of the culture conditions. Taken together with previous observations, these data suggest that a threshold concentration for calmodulin is required for progression through the cell cycle, DNA synthesis and cell division.
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25
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Kristensen BI. The effect of Mg2+ and calmidazolium on the calmodulin binding to inside-out vesicles of the human red cell membrane. BIOCHIMICA ET BIOPHYSICA ACTA 1986; 862:457-60. [PMID: 3778903 DOI: 10.1016/0005-2736(86)90251-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Calmodulin binds to inside-out vesicles of the human red cell membrane in a Ca2+-dependent manner. Mg2+ was found to be essential to this binding, half maximum binding occurring at decreasing Ca2+ concentration with increasing Mg2+ concentration. The calmodulin antagonist calmidazolium strongly reduced the Ca2+-dependent binding of calmodulin to the inside-out vesicles.
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26
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Hunziker W. The 28-kDa vitamin D-dependent calcium-binding protein has a six-domain structure. Proc Natl Acad Sci U S A 1986; 83:7578-82. [PMID: 3463988 PMCID: PMC386764 DOI: 10.1073/pnas.83.20.7578] [Citation(s) in RCA: 72] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
Vitamin D-dependent 28-kDa calcium-binding protein (CaBP28) cDNA clones were isolated from a chicken intestinal library. The nucleotide sequence analysis of the CaBP28 cDNA shows an open reading frame of 786 nucleotides, coding for a 262-amino acid 30.167-kDa protein. Interestingly, the protein contains six repeats of a domain with the feature of a calcium-binding site. In two of the six domains, oxygen-containing amino acids important for the positioning of calcium are absent, suggesting that these two sites have lost their calcium-binding capability and might have adopted a new function in evolution. In the chicken intestine, three different sized species of CaBP28 mRNA (2.0, 2.8, and 3.1 kilobases) are detected. Primer extension and S1 nuclease mapping show that the three CaBP28 mRNA species share a common 5' end but differ in the length of their 3' noncoding sequence. A similar triplet of CaBP28 mRNAs is identified in the rat kidney by the chicken probe, showing an interspecies conservation of the CaBP28. In the rat intestine, however, no CaBP28 mRNA could be detected. Instead, a vitamin D-dependent 9-kDa CaBP (CaBP9) is expressed, with an mRNA size of approximately equal to 0.7 kilobase that does not cross-hybridize with the CaBP28 probe. This indicates that the CaBP28 and CaBP9 are the product of two independent genes.
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27
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Buchta R, Bondi E, Fridkin M. Peptides related to the calcium binding domains II and III of calmodulin. Synthesis and calmodulin-like features. INTERNATIONAL JOURNAL OF PEPTIDE AND PROTEIN RESEARCH 1986; 28:289-97. [PMID: 2946646 DOI: 10.1111/j.1399-3011.1986.tb03258.x] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Three hexadecapeptides which correspond to the putative Ca2+ binding domains II and III of calmodulin were synthesized employing solid phase methodology. One of the peptides contained an internal cystine bridge which was formed while the corresponding linear peptide was still attached to the polymeric carrier. The interaction of the synthetic peptides with calcium ions was investigated using Tb3+-mediated fluorescence. Binding was of the order Ca12 greater than Ca13 greater than Ca13C (Fig. 1) with binding constants KTb3+ = 0.68 X 10(-5), 0.54 X 10(-5), and 0.21 X 10(-5) M-1 respectively. Biological activity of the compounds was assessed by measuring their stimulatory effect on erythrocyte membrane (Ca2+ + Mg2+)-ATPase activity. For 50% activity as compared with CaM, the concentration of peptides required was for Ca12, Ca13 and Ca13C, 50, 100 and 167 times higher than CaM, respectively. The results suggest that the three synthetic peptides possess certain calmodulin-like features.
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28
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29
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Permyakov EA, Shnyrov VL, Kalinichenko LP, Orlov NY. Effects of cation binding on the thermal transitions in calmodulin. BIOCHIMICA ET BIOPHYSICA ACTA 1985; 830:288-95. [PMID: 4027252 DOI: 10.1016/0167-4838(85)90285-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The thermal transitions in different forms of bovine brain calmodulin (0, 1, 2, 3 and 4 bound Ca2+ ions per molecule) have been studied by means of microcalorimetry, intrinsic tyrosine fluorescence, circular dichroism and infrared spectroscopy. The heating of the apoprotein from 5 to 110 degrees C induces at least three unfolding transitions. The heating of Ca2+-loaded calmodulin causes at least two structural transitions, one of which occurs at relatively low temperatures, from approx. 30 to approx 50 degrees C. The binding of the biologically significant Ca2+, Mg2+, Na+ and K+ ions has been measured at 12, 20, 28, 37 and 50 degrees C by means of the fluorescence method. The values of the binding parameters for these cations do not depend on temperature within the range 12 to 50 degrees C. It has been proposed that the temperature independence of the metal-ion-binding properties of calmodulin is achieved due to the temperature-induced structural changes, which adjust the protein conformation in such a way that the protein-binding parameters remain constant.
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30
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Haiech J, Sallantin J. Computer search of calcium binding sites in a gene data bank: use of learning techniques to build an expert system. Biochimie 1985; 67:555-60. [PMID: 3839696 DOI: 10.1016/s0300-9084(85)80276-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Using a learning set of 28 sequences able to bind calcium (each sequence is 12 residues long), we have built two filters by learning on this set. The first filter uses a pattern-matching technique and the second one takes into account the environment of amino-acids. These two filters have been used to find new calcium-binding proteins in a data bank. The results are discussed.
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31
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Gregori L, Gillevet PM, Doan P, Chau V. Mechanism of enzyme regulation by calmodulin and Ca2+. CURRENT TOPICS IN CELLULAR REGULATION 1985; 27:447-54. [PMID: 3004830 DOI: 10.1016/b978-0-12-152827-0.50045-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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32
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Bond M, Shuman H, Somlyo AP, Somlyo AV. Total cytoplasmic calcium in relaxed and maximally contracted rabbit portal vein smooth muscle. J Physiol 1984; 357:185-201. [PMID: 6512689 PMCID: PMC1193254 DOI: 10.1113/jphysiol.1984.sp015496] [Citation(s) in RCA: 91] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Abstract
The concentration of total cytoplasmic Ca in vascular smooth muscle was measured by electron probe microanalysis of strips of rabbit portal anterior mesenteric vein that were rapidly frozen either when relaxed or during a maintained (30 min) maximal contraction stimulated with high K and noradrenaline. Strips were also frozen and analysed after incubation in Ca-free, high-Mg2+ solution. Probe diameters of 0.1-0.2 micron and 1.0-1.5 micron were used to measure, respectively, cytoplasmic and cellular (including stored) Ca. There was a highly significant increase (P less than 0.0005) in cytoplasmic Ca of 1.0 +/- 0.2 (S.D.) mmol Ca/kg dry wt. from 0.8 +/- 0.2 (S.E. of mean) mmol/kg dry wt. (n = 262 spectra, six animals) to 1.8 +/- 0.2 (S.E. of mean) mmol Ca/kg dry wt. (n = 296 spectra, six animals), during maximal contraction. This increase is greater than can be accounted for by Ca binding to calmodulin and to myosin, suggesting the presence of other Ca-binding proteins in smooth muscle. A small amount (0.4-0.6 mmol/kg dry wt.) of cytoplasmic Ca remained after incubation in Ca-free, high-Mg2+ EGTA solution. This tightly bound, cytoplasmic Ca is insufficient to account for the total amount of divalent cation known to be bound to F-actin. We conclude that Mg is the major inexchangeably bound cation in F-actin in smooth as in striated muscle. In the contracted muscles, the cellular Ca concentration, measured with the large probes that include Ca stored in the sarcoplasmic reticulum (s.r.), was 3.2 +/- 0.3 (S.E. of mean) mmol Ca/kg dry wt. (n = 93), significantly higher than the cytoplasmic Ca concentration measured with small probes. This value of cellular Ca is probably an underestimate, as the large-diameter probes did not cover all of the peripheral s.r. The cellular Ca (measured with large probes) was highest in the contracted and lower in the relaxed tissue, and was significantly reduced in the muscles incubated in Ca-free solution. In contracted muscle, cytoplasmic Mg significantly decreased and mitochondrial Mg increased. In 0 Ca, high-Mg2+ solution, the cytoplasmic Mg increased significantly. Mitochondrial Ca did not significantly change during a maintained contraction, but was significantly lower (0.0 +/- 0.2 (S.E. of mean) mmol Ca/kg dry wt.) after incubation in Ca-free, high-Mg2+ solution than in the relaxed tissue (1.6 +/- 0.2 mmol Ca/kg dry wt.) in normal Ca-containing solution.
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33
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Abstract
Calmodulin activation of target enzymes depends on the interaction between calmodulin hydrophobic regions and some enzyme areas. The Ca2+ induced exposure of calmodulin hydrophobic sites was studied by means of 2-p-toluidinylnaphthalene-6-sulfonate, a fluorescent probe. Scatchard and Job plots showed that the calmodulin-Ca42+ complex bound two molecules of this hydrophobic probe, with KD congruent to 1.4 X 10(-4) M. These sites are not totally exposed until calmodulin has bound four Ca2+ per molecule, so the conformational change is not over before the four specific Ca2+ - binding sites are saturated with Ca2+.
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