• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4602591)   Today's Articles (1980)   Subscriber (49368)
For: Pugh T, Fouet O, Risterucci AM, Brottier P, Abouladze M, Deletrez C, Courtois B, Clement D, Larmande P, N'Goran JAK, Lanaud C. A new cacao linkage map based on codominant markers: development and integration of 201 new microsatellite markers. Theor Appl Genet 2004;108:1151-61. [PMID: 14760486 DOI: 10.1007/s00122-003-1533-4] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2003] [Accepted: 11/10/2003] [Indexed: 05/08/2023]
Number Cited by Other Article(s)
1
Rêgo APB, Mora-Ocampo IY, Corrêa RX. Interactions of Different Species of Phytophthora with Cacao Induce Genetic, Biochemical, and Morphological Plant Alterations. Microorganisms 2023;11:1172. [PMID: 37317146 DOI: 10.3390/microorganisms11051172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 04/22/2023] [Accepted: 04/24/2023] [Indexed: 06/16/2023]  Open
2
Quiroz-Vera J, Morillo E, Cordoba C, Buitron J. Molecular characterization of national cocoa collection from the leading traditional growing areas in Ecuador. BIONATURA 2023. [DOI: 10.21931/rb/2023.08.01.31] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/12/2023]  Open
3
Li Y, Gu M, Liu X, Lin J, Jiang H, Song H, Xiao X, Zhou W. Sequencing and analysis of the complete mitochondrial genomes of Toona sinensis and Toona ciliata reveal evolutionary features of Toona. BMC Genomics 2023;24:58. [PMID: 36726084 PMCID: PMC9893635 DOI: 10.1186/s12864-023-09150-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Accepted: 01/24/2023] [Indexed: 02/03/2023]  Open
4
Javaid N, Ramzan M, Khan IA, Alahmadi TA, Datta R, Fahad S, Danish S. The chloroplast genome of Farsetia hamiltonii Royle, phylogenetic analysis, and comparative study with other members of Clade C of Brassicaceae. BMC PLANT BIOLOGY 2022;22:384. [PMID: 35918648 PMCID: PMC9344719 DOI: 10.1186/s12870-022-03750-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Accepted: 07/13/2022] [Indexed: 06/01/2023]
5
Cui G, Wang C, Wei X, Wang H, Wang X, Zhu X, Li J, Yang H, Duan H. Complete chloroplast genome of Hordeum brevisubulatum: Genome organization, synonymous codon usage, phylogenetic relationships, and comparative structure analysis. PLoS One 2021;16:e0261196. [PMID: 34898618 PMCID: PMC8668134 DOI: 10.1371/journal.pone.0261196] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2021] [Accepted: 11/28/2021] [Indexed: 11/18/2022]  Open
6
Rono PC, Dong X, Yang JX, Mutie FM, Oulo MA, Malombe I, Kirika PM, Hu GW, Wang QF. Initial Complete Chloroplast Genomes of Alchemilla (Rosaceae): Comparative Analysis and Phylogenetic Relationships. Front Genet 2020;11:560368. [PMID: 33362846 PMCID: PMC7756076 DOI: 10.3389/fgene.2020.560368] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Accepted: 10/15/2020] [Indexed: 11/13/2022]  Open
7
Du X, Zeng T, Feng Q, Hu L, Luo X, Weng Q, He J, Zhu B. The complete chloroplast genome sequence of yellow mustard (Sinapis alba L.) and its phylogenetic relationship to other Brassicaceae species. Gene 2020;731:144340. [PMID: 31923575 DOI: 10.1016/j.gene.2020.144340] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2019] [Revised: 12/09/2019] [Accepted: 01/06/2020] [Indexed: 12/20/2022]
8
Yan C, Du J, Gao L, Li Y, Hou X. The complete chloroplast genome sequence of watercress (Nasturtium officinale R. Br.): Genome organization, adaptive evolution and phylogenetic relationships in Cardamineae. Gene 2019;699:24-36. [PMID: 30849538 DOI: 10.1016/j.gene.2019.02.075] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2018] [Revised: 02/16/2019] [Accepted: 02/18/2019] [Indexed: 12/12/2022]
9
Wickramasuriya AM, Dunwell JM. Cacao biotechnology: current status and future prospects. PLANT BIOTECHNOLOGY JOURNAL 2018;16:4-17. [PMID: 28985014 PMCID: PMC5785363 DOI: 10.1111/pbi.12848] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2017] [Revised: 09/25/2017] [Accepted: 09/28/2017] [Indexed: 05/03/2023]
10
Livingstone D, Stack C, Mustiga GM, Rodezno DC, Suarez C, Amores F, Feltus FA, Mockaitis K, Cornejo OE, Motamayor JC. A Larger Chocolate Chip-Development of a 15K Theobroma cacao L. SNP Array to Create High-Density Linkage Maps. FRONTIERS IN PLANT SCIENCE 2017;8:2008. [PMID: 29259608 PMCID: PMC5723429 DOI: 10.3389/fpls.2017.02008] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Accepted: 11/10/2017] [Indexed: 05/30/2023]
11
Unver T, Wu Z, Sterck L, Turktas M, Lohaus R, Li Z, Yang M, He L, Deng T, Escalante FJ, Llorens C, Roig FJ, Parmaksiz I, Dundar E, Xie F, Zhang B, Ipek A, Uranbey S, Erayman M, Ilhan E, Badad O, Ghazal H, Lightfoot DA, Kasarla P, Colantonio V, Tombuloglu H, Hernandez P, Mete N, Cetin O, Van Montagu M, Yang H, Gao Q, Dorado G, Van de Peer Y. Genome of wild olive and the evolution of oil biosynthesis. Proc Natl Acad Sci U S A 2017;114:E9413-E9422. [PMID: 29078332 PMCID: PMC5676908 DOI: 10.1073/pnas.1708621114] [Citation(s) in RCA: 154] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
12
da Costa ZP, Munhoz CDF, Vieira MLC. Report on the development of putative functional SSR and SNP markers in passion fruits. BMC Res Notes 2017;10:445. [PMID: 28874179 PMCID: PMC5585897 DOI: 10.1186/s13104-017-2771-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2016] [Accepted: 08/31/2017] [Indexed: 11/10/2022]  Open
13
Liu LX, Li R, Worth JRP, Li X, Li P, Cameron KM, Fu CX. The Complete Chloroplast Genome of Chinese Bayberry (Morella rubra, Myricaceae): Implications for Understanding the Evolution of Fagales. FRONTIERS IN PLANT SCIENCE 2017;8:968. [PMID: 28713393 PMCID: PMC5492642 DOI: 10.3389/fpls.2017.00968] [Citation(s) in RCA: 78] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2017] [Accepted: 05/23/2017] [Indexed: 05/18/2023]
14
Wei S, Wang X, Bi C, Xu Y, Wu D, Ye N. Assembly and analysis of the complete Salix purpurea L. (Salicaceae) mitochondrial genome sequence. SPRINGERPLUS 2016;5:1894. [PMID: 27843751 PMCID: PMC5084139 DOI: 10.1186/s40064-016-3521-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/10/2016] [Accepted: 10/11/2016] [Indexed: 11/10/2022]
15
The Whole Genome Assembly and Comparative Genomic Research of Thellungiella parvula (Extremophile Crucifer) Mitochondrion. Int J Genomics 2016;2016:5283628. [PMID: 27148547 PMCID: PMC4842374 DOI: 10.1155/2016/5283628] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2015] [Revised: 03/03/2016] [Accepted: 03/10/2016] [Indexed: 11/17/2022]  Open
16
Royaert S, Jansen J, da Silva DV, de Jesus Branco SM, Livingstone DS, Mustiga G, Marelli JP, Araújo IS, Corrêa RX, Motamayor JC. Identification of candidate genes involved in Witches' broom disease resistance in a segregating mapping population of Theobroma cacao L. in Brazil. BMC Genomics 2016;17:107. [PMID: 26865216 PMCID: PMC4750280 DOI: 10.1186/s12864-016-2415-x] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2015] [Accepted: 01/26/2016] [Indexed: 01/17/2023]  Open
17
Chen J, Hao Z, Xu H, Yang L, Liu G, Sheng Y, Zheng C, Zheng W, Cheng T, Shi J. The complete chloroplast genome sequence of the relict woody plant Metasequoia glyptostroboides Hu et Cheng. FRONTIERS IN PLANT SCIENCE 2015;6:447. [PMID: 26136762 PMCID: PMC4468836 DOI: 10.3389/fpls.2015.00447] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2015] [Accepted: 05/31/2015] [Indexed: 05/03/2023]
18
Herrmann L, Felbinger C, Haase I, Rudolph B, Biermann B, Fischer M. Food Fingerprinting: Characterization of the Ecuadorean Type CCN-51 of Theobroma cacao L. Using Microsatellite Markers. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2015;63:4539-4544. [PMID: 25892108 DOI: 10.1021/acs.jafc.5b01462] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
19
Herrmann L, Haase I, Blauhut M, Barz N, Fischer M. DNA-based differentiation of the Ecuadorian cocoa types CCN-51 and Arriba based on sequence differences in the chloroplast genome. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014;62:12118-12127. [PMID: 25404556 DOI: 10.1021/jf504258w] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
20
Mejía LC, Herre EA, Sparks JP, Winter K, García MN, Van Bael SA, Stitt J, Shi Z, Zhang Y, Guiltinan MJ, Maximova SN. Pervasive effects of a dominant foliar endophytic fungus on host genetic and phenotypic expression in a tropical tree. Front Microbiol 2014;5:479. [PMID: 25309519 PMCID: PMC4162356 DOI: 10.3389/fmicb.2014.00479] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2014] [Accepted: 08/25/2014] [Indexed: 12/05/2022]  Open
21
Wang D, Li Y, Li L, Wei Y, Li Z. The first genetic linkage map of Eucommia ulmoides. J Genet 2014;93:13-20. [PMID: 24840819 DOI: 10.1007/s12041-014-0322-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
22
Allegre M, Argout X, Boccara M, Fouet O, Roguet Y, Bérard A, Thévenin JM, Chauveau A, Rivallan R, Clement D, Courtois B, Gramacho K, Boland-Augé A, Tahi M, Umaharan P, Brunel D, Lanaud C. Discovery and mapping of a new expressed sequence tag-single nucleotide polymorphism and simple sequence repeat panel for large-scale genetic studies and breeding of Theobroma cacao L. DNA Res 2011;19:23-35. [PMID: 22210604 PMCID: PMC3276266 DOI: 10.1093/dnares/dsr039] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
23
The genome of Theobroma cacao. Nat Genet 2010;43:101-8. [PMID: 21186351 DOI: 10.1038/ng.736] [Citation(s) in RCA: 393] [Impact Index Per Article: 28.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2010] [Accepted: 12/01/2010] [Indexed: 11/09/2022]
24
Zhan A, Hu J, Hu X, Hui M, Wang M, Peng W, Huang X, Wang S, Lu W, Sun C, Bao Z. Construction of microsatellite-based linkage maps and identification of size-related quantitative trait loci for Zhikong scallop (Chlamys farreri). Anim Genet 2009;40:821-31. [PMID: 19515089 DOI: 10.1111/j.1365-2052.2009.01920.x] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
25
Mining of expressed sequence tag libraries of cacao for microsatellite markers using five computational tools. J Genet 2009;88:217-25. [PMID: 19700860 DOI: 10.1007/s12041-009-0030-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
26
Kuhn DN, Motamayor JC, Meerow AW, Borrone JW, Schnell RJ. SSCP markers provide a useful alternative to microsatellites in genotyping and estimating genetic diversity in populations and germplasm collections of plant specialty crops. Electrophoresis 2008;29:4096-108. [PMID: 18958880 DOI: 10.1002/elps.200700937] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
27
Motamayor JC, Lachenaud P, da Silva E Mota JW, Loor R, Kuhn DN, Brown JS, Schnell RJ. Geographic and genetic population differentiation of the Amazonian chocolate tree (Theobroma cacao L). PLoS One 2008;3:e3311. [PMID: 18827930 PMCID: PMC2551746 DOI: 10.1371/journal.pone.0003311] [Citation(s) in RCA: 155] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2008] [Accepted: 08/29/2008] [Indexed: 11/19/2022]  Open
28
Schnell RJ, Kuhn DN, Brown JS, Olano CT, Phillips-Mora W, Amores FM, Motamayor JC. Development of a marker assisted selection program for cacao. PHYTOPATHOLOGY 2007;97:1664-9. [PMID: 18943731 DOI: 10.1094/phyto-97-12-1664] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
29
Gesteira AS, Micheli F, Carels N, Da Silva AC, Gramacho KP, Schuster I, Macêdo JN, Pereira GAG, Cascardo JCM. Comparative analysis of expressed genes from cacao meristems infected by Moniliophthora perniciosa. ANNALS OF BOTANY 2007;100:129-40. [PMID: 17557832 PMCID: PMC2735303 DOI: 10.1093/aob/mcm092] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
30
Marcano M, Pugh T, Cros E, Morales S, Portillo Páez EA, Courtois B, Glaszmann JC, Engels JMM, Phillips W, Astorga C, Risterucci AM, Fouet O, González V, Rosenberg K, Vallat I, Dagert M, Lanaud C. Adding value to cocoa (Theobroma cacao L.) germplasm information with domestication history and admixture mapping. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2007;114:877-84. [PMID: 17252253 DOI: 10.1007/s00122-006-0486-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2006] [Accepted: 12/16/2006] [Indexed: 05/13/2023]
31
ALVES RAFAELM, SEBBENN ALEXANDREM, ARTERO ANGELAS, FIGUEIRA ANTONIO. Microsatellite loci transferability from Theobroma cacao to Theobroma grandiflorum. ACTA ACUST UNITED AC 2006. [DOI: 10.1111/j.1471-8286.2006.01496.x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
32
Loridon K, McPhee K, Morin J, Dubreuil P, Pilet-Nayel ML, Aubert G, Rameau C, Baranger A, Coyne C, Lejeune-Hènaut I, Burstin J. Microsatellite marker polymorphism and mapping in pea (Pisum sativum L.). TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2005;111:1022-31. [PMID: 16133320 DOI: 10.1007/s00122-005-0014-3] [Citation(s) in RCA: 108] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2005] [Accepted: 06/09/2005] [Indexed: 05/03/2023]
33
Cryer NC, Butler DR, Wilkinson MJ. High throughput, high resolution selection of polymorphic microsatellite loci for multiplex analysis. PLANT METHODS 2005;1:3. [PMID: 16270924 PMCID: PMC1277016 DOI: 10.1186/1746-4811-1-3] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/25/2005] [Accepted: 08/18/2005] [Indexed: 05/05/2023]
34
Clément D, Lanaud C, Sabau X, Fouet O, Le Cunff L, Ruiz E, Risterucci AM, Glaszmann JC, Piffanelli P. Creation of BAC genomic resources for cocoa ( Theobroma cacao L.) for physical mapping of RGA containing BAC clones. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2004;108:1627-1634. [PMID: 15235775 DOI: 10.1007/s00122-004-1593-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2003] [Accepted: 01/05/2004] [Indexed: 05/24/2023]
PrevPage 1 of 1 1Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA