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Alami MM, Shu S, Liu S, Alami MJ, Feng S, Mei Z, Yang G, Wang X. Impact of nitrogen rates on biosynthesis pathways: A comparative study of diterpene synthases in clerodane diterpenoids and enzymes in benzylisoquinoline alkaloids. Int J Biol Macromol 2024; 280:135985. [PMID: 39322146 DOI: 10.1016/j.ijbiomac.2024.135985] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 09/09/2024] [Accepted: 09/22/2024] [Indexed: 09/27/2024]
Abstract
Tinospora sagittata is rich in secondary metabolites used in traditional medicine. However, environmental factors impact key enzymes in metabolite synthesis, highlighting the need for improved growth conditions. This study employs transcriptomics and metabolomics to assess nitrogen's impact on enzymes in secondary metabolites biosynthesis pathways. The gene expressions of berberine bridge enzymes (BBEs) like TsBBE2 had peak expression in low nitrogen treatments (A0 and A1) but were absent in higher nitrogen treatments (A2 and A3). Similar trends were observed for other enzymes such as (S)-scoulerine 9-O-methyltransferase (TsCMT3), Tetrahydroberberine oxidase (TsSTOX), and Columbamine O-methyltransferase (TsCoCOMT2-4) in response to nitrogen levels. In examining gene families related to diterpene synthases (diTPS), 1-deoxyxylulose 5-phosphate synthase (TsDXR1) expression increased with higher nitrogen fertilizer, while TsDXR2 peaked at maximal nitrogen levels. Geranylgeranyl diphosphate synthase (TsGGPP3 and TsGGPP5) decreased with nitrogen levels. (-)-kolavenyl diphosphate synthase (KPS) genes had higher expression in treatments, while ent-kaurene synthase (KSL) genes, especially TsKSL1 and TsKSL2, showed higher expression in control conditions with lower nitrogen fertilizer. Metabolite analysis confirmed more upregulated compounds in A3 compared to A0. These findings have practical implications for agriculture and pharmaceuticals, highlighting the link between nitrogen fertilization and specialized metabolism in medicinal plants.
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Affiliation(s)
| | - Shaohua Shu
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Sanbo Liu
- China Resources Sanjiu (Huangshi) Pharmaceutical Co., Ltd., Huangshi 435000, Hubei, China
| | - Mohammad Jawad Alami
- Institute of Urban Environment (IUE), Chinese Academy of Sciences (CAS), Xiamen 361021, China
| | - Shengqiu Feng
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Zhinan Mei
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Guozheng Yang
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Xuekui Wang
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
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2
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Zhu Y, Sun Z, Wu H, Cui C, Meng S, Xu C. Transcriptomic Analysis of the Molecular Mechanism Potential of Grafting-Enhancing the Ability of Oriental Melon to Tolerate Low-Nitrogen Stress. Int J Mol Sci 2024; 25:8227. [PMID: 39125797 PMCID: PMC11311868 DOI: 10.3390/ijms25158227] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2024] [Revised: 07/25/2024] [Accepted: 07/26/2024] [Indexed: 08/12/2024] Open
Abstract
Nitrogen is the primary nutrient for plants. Low nitrogen generally affects plant growth and fruit quality. Melon, as an economic crop, is highly dependent on nitrogen. However, the response mechanism of its self-rooted and grafted seedlings to low-nitrogen stress has not been reported previously. Therefore, in this study, we analyzed the transcriptional differences between self-rooted and grafted seedlings under low-nitrogen stress using fluorescence characterization and RNA-Seq analysis. It was shown that low-nitrogen stress significantly inhibited the fluorescence characteristics of melon self-rooted seedlings. Analysis of differentially expressed genes showed that the synthesis of genes related to hormone signaling, such as auxin and brassinolide, was delayed under low-nitrogen stress. Oxidative stress response, involved in carbon and nitrogen metabolism, and secondary metabolite-related differentially expressed genes (DEGs) were significantly down-regulated. It can be seen that low-nitrogen stress causes changes in many hormonal signals in plants, and grafting can alleviate the damage caused by low-nitrogen stress on plants, ameliorate the adverse effects of nitrogen stress on plants, and help them better cope with environmental stresses.
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Affiliation(s)
- Yulei Zhu
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, China; (Y.Z.); (Z.S.); (H.W.); (C.C.)
- Key Laboratory of Protected Horticulture (Ministry of Education), Shenyang Agricultural University, Shenyang 110866, China
- Modern Protected Horticultural Engineering & Technology Center, Shenyang Agricultural University, Shenyang 110866, China
| | - Ziqing Sun
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, China; (Y.Z.); (Z.S.); (H.W.); (C.C.)
- Key Laboratory of Protected Horticulture (Ministry of Education), Shenyang Agricultural University, Shenyang 110866, China
- Modern Protected Horticultural Engineering & Technology Center, Shenyang Agricultural University, Shenyang 110866, China
| | - Hongxi Wu
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, China; (Y.Z.); (Z.S.); (H.W.); (C.C.)
- Key Laboratory of Protected Horticulture (Ministry of Education), Shenyang Agricultural University, Shenyang 110866, China
- Modern Protected Horticultural Engineering & Technology Center, Shenyang Agricultural University, Shenyang 110866, China
| | - Caifeng Cui
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, China; (Y.Z.); (Z.S.); (H.W.); (C.C.)
- Key Laboratory of Protected Horticulture (Ministry of Education), Shenyang Agricultural University, Shenyang 110866, China
- Modern Protected Horticultural Engineering & Technology Center, Shenyang Agricultural University, Shenyang 110866, China
| | - Sida Meng
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, China; (Y.Z.); (Z.S.); (H.W.); (C.C.)
- Key Laboratory of Protected Horticulture (Ministry of Education), Shenyang Agricultural University, Shenyang 110866, China
- Modern Protected Horticultural Engineering & Technology Center, Shenyang Agricultural University, Shenyang 110866, China
- Key Laboratory of Horticultural Equipment (Ministry of Agriculture and Rural Affairs), Shenyang Agricultural University, Shenyang 110866, China
| | - Chuanqiang Xu
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, China; (Y.Z.); (Z.S.); (H.W.); (C.C.)
- Key Laboratory of Protected Horticulture (Ministry of Education), Shenyang Agricultural University, Shenyang 110866, China
- Modern Protected Horticultural Engineering & Technology Center, Shenyang Agricultural University, Shenyang 110866, China
- Key Laboratory of Horticultural Equipment (Ministry of Agriculture and Rural Affairs), Shenyang Agricultural University, Shenyang 110866, China
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Wu H, Li J, Pu Q, Mi C, Zeng G, Chen Y, Kong D, Zuo X, Hu X, Li O. Physiological and transcriptome analysis of Dendrobium officinale under low nitrogen stress. FUNCTIONAL PLANT BIOLOGY : FPB 2023; 50:314-334. [PMID: 36872310 DOI: 10.1071/fp22061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 02/06/2023] [Indexed: 06/18/2023]
Abstract
Nitrogen (N) is the main nutrient of plants, and low nitrogen usually affects plant growth and crop yield. The traditional Chinese herbal medicine Dendrobium officinale Kimura et. Migo is a typical low nitrogen-tolerant plant, and its mechanism in response to low nitrogen stress has not previously been reported. In this study, physiological measurements and RNA-Seq analysis were used to analyse the physiological changes and molecular responses of D. officinale under different nitrogen concentrations. The results showed that under low nitrogen levels, the growth, photosynthesis and superoxide dismutase activity were found to be significantly inhibited, while the activities of peroxidase and catalase, the content of polysaccharides and flavonoids significantly increased. Differentially expressed genes (DEGs) analysis showed that nitrogen and carbon metabolisms, transcriptional regulation, antioxidative stress, secondary metabolite synthesis and signal transduction all made a big difference in low nitrogen stress. Therefore, copious polysaccharide accumulation, efficient assimilation and recycling of nitrogen, as well as rich antioxidant components play critical roles. This study is helpful for understanding the response mechanism of D. officinale to low nitrogen levels, which might provide good guidance for practical production of high quality D. officinale .
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Affiliation(s)
- Hangtao Wu
- Zhejiang Province Key Laboratory of Plant Secondary Metabolism and Regulation, College of Life Science, Zhejiang Sci-Tech University, Hangzhou 310018, P. R. China
| | - Jin Li
- Zhejiang Province Key Laboratory of Plant Secondary Metabolism and Regulation, College of Life Science, Zhejiang Sci-Tech University, Hangzhou 310018, P. R. China
| | - Qian Pu
- Zhejiang Province Key Laboratory of Plant Secondary Metabolism and Regulation, College of Life Science, Zhejiang Sci-Tech University, Hangzhou 310018, P. R. China
| | - Chunyi Mi
- Zhejiang Province Key Laboratory of Plant Secondary Metabolism and Regulation, College of Life Science, Zhejiang Sci-Tech University, Hangzhou 310018, P. R. China
| | - Guohong Zeng
- Zhejiang Province Key Laboratory of Plant Secondary Metabolism and Regulation, College of Life Science, Zhejiang Sci-Tech University, Hangzhou 310018, P. R. China
| | - Ying Chen
- Zhejiang Province Key Laboratory of Plant Secondary Metabolism and Regulation, College of Life Science, Zhejiang Sci-Tech University, Hangzhou 310018, P. R. China
| | - Dedong Kong
- Institute of Digital Agriculture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310018, P. R. China
| | - Xiaorong Zuo
- Xi'an Ande Pharmaceutical Co., Ltd, Zhenping Branch, Xi'an 710000, P. R. China
| | - Xiufang Hu
- Zhejiang Province Key Laboratory of Plant Secondary Metabolism and Regulation, College of Life Science, Zhejiang Sci-Tech University, Hangzhou 310018, P. R. China
| | - Ou Li
- Zhejiang Province Key Laboratory of Plant Secondary Metabolism and Regulation, College of Life Science, Zhejiang Sci-Tech University, Hangzhou 310018, P. R. China
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Xu Q, Huang S, Guo G, Yang C, Wang M, Zeng X, Wang Y. Inferring regulatory element landscapes and gene regulatory networks from integrated analysis in eight hulless barley varieties under abiotic stress. BMC Genomics 2022; 23:843. [PMID: 36539685 PMCID: PMC9769044 DOI: 10.1186/s12864-022-09070-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 12/05/2022] [Indexed: 12/24/2022] Open
Abstract
BACKGROUND The cis-regulatory element became increasingly important for resistance breeding. There were many DNA variations identified by resequencing. To investigate the links between the DNA variations and cis-regulatory element was the fundamental work. DNA variations in cis-regulatory elements caused phenotype variations in general. RESULTS We used WGBS, ChIP-seq and RNA-seq technology to decipher the regulatory element landscape from eight hulless barley varieties under four kinds of abiotic stresses. We discovered 231,440 lowly methylated regions (LMRs) from the methylome data of eight varieties. The LMRs mainly distributed in the intergenic regions. A total of 97,909 enhancer-gene pairs were identified from the correlation analysis between methylation degree and expression level. A lot of enriched motifs were recognized from the tolerant-specific LMRs. The key transcription factors were screened out and the transcription factor regulatory network was inferred from the enhancer-gene pairs data for drought stress. The NAC transcription factor was predicted to target to TCP, bHLH, bZIP transcription factor genes. We concluded that the H3K27me3 modification regions overlapped with the LMRs more than the H3K4me3. The variation of single nucleotide polymorphism was more abundant in LMRs than the remain regions of the genome. CONCLUSIONS Epigenetic regulation is an important mechanism for organisms to adapt to complex environments. Through the study of DNA methylation and histone modification, we found that many changes had taken place in enhancers and transcription factors in the abiotic stress of hulless barley. For example, transcription factors including NAC may play an important role. This enriched the molecular basis of highland barley stress response.
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Affiliation(s)
- Qijun Xu
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, 850002 China ,grid.464485.f0000 0004 1777 7975Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 850002 China
| | - Shunmou Huang
- grid.108266.b0000 0004 1803 0494College of Forestry, Henan Agricultural University, Zhengzhou, 450002 People’s Republic of China
| | - Ganggang Guo
- grid.410727.70000 0001 0526 1937Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081 China
| | - Chunbao Yang
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, 850002 China ,grid.464485.f0000 0004 1777 7975Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 850002 China
| | - Mu Wang
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, 850002 China ,grid.464485.f0000 0004 1777 7975Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 850002 China
| | - Xingquan Zeng
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, 850002 China ,grid.464485.f0000 0004 1777 7975Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 850002 China
| | - Yulin Wang
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, 850002 China ,grid.464485.f0000 0004 1777 7975Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 850002 China
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5
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Qiao X, Ruan M, Yu T, Cui C, Chen C, Zhu Y, Li F, Wang S, Na X, Wang X, Bi Y. UCP1 and AOX1a contribute to regulation of carbon and nitrogen metabolism and yield in Arabidopsis under low nitrogen stress. Cell Mol Life Sci 2022; 79:69. [PMID: 34974624 PMCID: PMC11072780 DOI: 10.1007/s00018-021-04036-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2021] [Revised: 11/08/2021] [Accepted: 11/11/2021] [Indexed: 12/19/2022]
Abstract
Nitrogen (N) availability is a critical factor for plant development and crop yield, and it closely correlates to carbon (C) metabolism. Uncoupling protein (UCP) and alternative oxidase (AOX) exhibit a strong correlation with N and C metabolism. Here, we investigated the functions of UCP1 and AOX1a using their mutants and complementation lines in Arabidopsis adaptation to low N. Low N markedly increased AOX1a and UCP1 expression, alternative pathway capacity and UCP activity. Eight-day-old aox1a/ucp1 seedlings were more sensitive to low N than Col-0 and single mutants, exhibiting lower primary root length and higher anthocyanin accumulation. The net photosynthetic rate, electron transport rate, PSII actual photochemical efficiency, stomatal conductance and carboxylation efficiency were markedly decreased in ucp1 and aox1a/ucp1 compared to those in Col-0 and aox1a under low N stress; comparatively, chlorophyll content and non-photochemical quenching coefficient were the lowest and highest in aox1a/ucp1, respectively. Nitrate acquisition rate was accelerated in aox1a/ucp1, but its transport activity was decreased, which resulted in low nitrate content and nitrate reductase activity under low N condition. The C/N ratio in seeds, but not in leaves, is higher in aox1a/ucp1 than that in Col-0, aox1a and ucp1 under low N condition. RNA-seq analysis revealed that many genes involved in photosynthesis and C/N metabolism were markedly down-regulated in aox1a/ucp1 under low N stress. These results highlight the key roles of UCP1 and AOX1a in modulating photosynthetic capacity, C/N assimilation and distribution under low N stress.
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Affiliation(s)
- Xinyan Qiao
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China
| | - Mengjiao Ruan
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China
| | - Tao Yu
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China
| | - Chaiyan Cui
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China
| | - Cuiyun Chen
- Shapotou Desert Research and Experiment Station, Cold and Arid Regions Environmental and Engineering Research Institute, Chinese Academy of Sciences, Lanzhou, 730000, Gansu, People's Republic of China
| | - Yuanzhi Zhu
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China
| | - Fanglin Li
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China
| | - Shengwang Wang
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China
| | - Xiaofan Na
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China
| | - Xiaomin Wang
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China.
| | - Yurong Bi
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China.
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6
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Jin J, Wang J, Li K, Wang S, Qin J, Zhang G, Na X, Wang X, Bi Y. Integrated Physiological, Transcriptomic, and Metabolomic Analyses Revealed Molecular Mechanism for Salt Resistance in Soybean Roots. Int J Mol Sci 2021; 22:12848. [PMID: 34884654 PMCID: PMC8657671 DOI: 10.3390/ijms222312848] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Revised: 11/21/2021] [Accepted: 11/22/2021] [Indexed: 12/03/2022] Open
Abstract
Salinity stress is a threat to yield in many crops, including soybean (Glycine max L.). In this study, three soybean cultivars (JD19, LH3, and LD2) with different salt resistance were used to analyze salt tolerance mechanisms using physiology, transcriptomic, metabolomic, and bioinformatic methods. Physiological studies showed that salt-tolerant cultivars JD19 and LH3 had less root growth inhibition, higher antioxidant enzyme activities, lower ROS accumulation, and lower Na+ and Cl- contents than salt-susceptible cultivar LD2 under 100 mM NaCl treatment. Comparative transcriptome analysis showed that compared with LD2, salt stress increased the expression of antioxidant metabolism, stress response metabolism, glycine, serine and threonine metabolism, auxin response protein, transcription, and translation-related genes in JD19 and LH3. The comparison of metabolite profiles indicated that amino acid metabolism and the TCA cycle were important metabolic pathways of soybean in response to salt stress. In the further validation analysis of the above two pathways, it was found that compared with LD2, JD19, and LH3 had higher nitrogen absorption and assimilation rate, more amino acid accumulation, and faster TCA cycle activity under salt stress, which helped them better adapt to salt stress. Taken together, this study provides valuable information for better understanding the molecular mechanism underlying salt tolerance of soybean and also proposes new ideas and methods for cultivating stress-tolerant soybean.
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Affiliation(s)
- Jie Jin
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (J.J.); (K.L.); (S.W.); (J.Q.); (X.N.)
| | - Jianfeng Wang
- State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining 810016, China;
- Center for Grassland Microbiome, Collaborative Innovation Center for Western Ecological Safety, State Key Laboratory of Grassland Agro-Ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730000, China
| | - Keke Li
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (J.J.); (K.L.); (S.W.); (J.Q.); (X.N.)
| | - Shengwang Wang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (J.J.); (K.L.); (S.W.); (J.Q.); (X.N.)
| | - Juan Qin
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (J.J.); (K.L.); (S.W.); (J.Q.); (X.N.)
| | - Guohong Zhang
- Institute of Dryland Agriculture, Gansu Academy of Agricultural Sciences, Lanzhou 730070, China;
| | - Xiaofan Na
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (J.J.); (K.L.); (S.W.); (J.Q.); (X.N.)
| | - Xiaomin Wang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (J.J.); (K.L.); (S.W.); (J.Q.); (X.N.)
| | - Yurong Bi
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (J.J.); (K.L.); (S.W.); (J.Q.); (X.N.)
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Alternative Pathway Is Involved in Hydrogen Peroxide-Enhanced Cadmium Tolerance in Hulless Barley Roots. PLANTS 2021; 10:plants10112329. [PMID: 34834692 PMCID: PMC8622811 DOI: 10.3390/plants10112329] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/20/2021] [Revised: 10/21/2021] [Accepted: 10/23/2021] [Indexed: 11/18/2022]
Abstract
Hulless barley, grown in the Qinghai Tibet Plateau, has a wide range of environmental stress tolerance. Alternative pathway (AP) and hydrogen peroxide (H2O2) are involved in enhancing plant tolerance to environmental stresses. However, the relationship between H2O2 and AP in hulless barley tolerance to cadmium (Cd) stress remains unclear. In the study, the role and relationship of AP and H2O2 under Cd stress were investigated in hulless barley (Kunlun14) and common barley (Ganpi6). Results showed that the expression level of alternative oxidase (AOX) genes (mainly AOX1a), AP capacity (Valt), and AOX protein were clearly induced more in Kunlun14 than in Ganpi 6 under Cd stress; moreover, these parameters were further enhanced by applying H2O2. Malondialdehyde (MDA) content, electrolyte leakage (EL) and NAD(P)H to NAD(P) ratio also increased in Cd-treated roots, especially in Kunlun 14, which can be markedly alleviated by exogenous H2O2. However, this mitigating effect was aggravated by salicylhydroxamic acid (SHAM, an AOX inhibitor), suggesting AP contributes to the H2O2-enhanced Cd tolerance. Further study demonstrated that the effect of SHAM on the antioxidant enzymes and antioxidants was minimal. Taken together, hulless barley has higher tolerance to Cd than common barley; and in the process, AP exerts an indispensable function in the H2O2-enhanced Cd tolerance. AP is mainly responsible for the decrease of ROS levels by dissipating excess reducing equivalents.
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8
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He Q, Li P, Zhang W, Bi Y. Cytoplasmic glucose-6-phosphate dehydrogenase plays an important role in the silicon-enhanced alkaline tolerance in highland barley. FUNCTIONAL PLANT BIOLOGY : FPB 2021; 48:119-130. [PMID: 32777198 DOI: 10.1071/fp20084] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Accepted: 07/22/2020] [Indexed: 06/11/2023]
Abstract
Glucose-6-phosphate dehydrogenase (G6PDH), as a key enzyme in the pentose phosphate pathway, extensively responds to the biotic and abiotic stresses. In this study we focussed on the G6PDH role in the alleviation of alkaline stress induced by silicon (Si) in highland barley. Application of Si reduced the water loss and malondialdehyde (MDA) and reactive oxygen species (ROS) contents, improved the fresh weight, photosynthesis, K+ content, and the superoxide dismutase (SOD) and catalase (CAT) activities, thus alleviating the damage caused by alkaline stress. The G6PDH activity, especially the cytoplasmic G6PDH, significantly increased under alkaline stress, and was further stimulated by the addition of exogenous Si. Meanwhile, the levels of NADPH and reduced glutathione (GSH) showed similar profiles to G6PDH activity under NaHCO3 and NaHCO3 + Si treatments. The inhibition of G6PDH activity by glucosamine abolished the relieving effect of Si on alkaline stress, which was manifested in the increase of ROS and the decrease of GSH content. Together, our results suggest that Si-enhanced tolerance of alkaline stress may be related to the regulation of GSH levels by the cytoplasmic G6PDH in highland barley.
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Affiliation(s)
- Qiang He
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, People's Republic of China
| | - Ping Li
- State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining 810016, People's Republic of China
| | - Wenya Zhang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, People's Republic of China
| | - Yurong Bi
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, People's Republic of China; and Corresponding author.
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9
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Liu J, Wang X, Yang L, Nan W, Ruan M, Bi Y. Involvement of active MKK9-MAPK3/MAPK6 in increasing respiration in salt-treated Arabidopsis callus. PROTOPLASMA 2020; 257:965-977. [PMID: 32008084 DOI: 10.1007/s00709-020-01483-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Accepted: 01/20/2020] [Indexed: 06/10/2023]
Abstract
Mitogen-activated protein kinase kinase 9 (MKK9) is an upstream activator of mitogen-activated protein kinase 3 (MAPK3) and MAPK6 in planta. To investigate MKK9 roles in mitochondrial respiration in Arabidopsis, MKK9DD, the active allele with mutations of Thr-201 and Ser-205 to Asp, and MKK9KR, the allele lacking MKK9 activity with a mutation of Lys-76 to Arg, were used. Results showed that the total respiratory rate (Vt), alternative pathway capacity (Valt) and cytochrome pathway capacity (Vcyt) increased under 0-100 mM NaCl treatments but decreased under 150-300 mM NaCl treatments in Col-0 callus. However, the activation of MKK9 by dexamethasone (DEX) increased Vt, Valt and Vcyt under 200 mM NaCl treatment; moreover, Valt showed more increase than Vcyt. The activation of MKK9 in MKK9DD callus sharply increased AOX protein expression under normal and NaCl conditions, but the increase was not observed in MKK9KR callus. Further results indicated that MAPK3 and MAPK6 were involved in the MKK9-induced increase of AOX protein levels. qRT-PCR results showed that MKK9-MAPK3/MAPK6 was involved in the NaCl-induced AOX1b and AOX1d expression, but only MKK9-MAPK3 was necessary for AOX2 expression; in addition, MAPK3 regulated the AOX1a transcription in an MKK9-independent manner. MKK9 positively regulated SOD and CAT activities by affecting MAPK3 and MAPK6 and negatively regulated APX and POD activities by affecting MAPK3. Moreover, MKK9 functions as a positive factor in H2O2 accumulation under salt stress. The regulation of ethylene on alternative respiration was also associated with MKK9 under salt stress. Taken together, the MKK9-MAPK3/MAPK6 pathway plays a pivotal role in increasing alternative respiration in the salt-treated Arabidopsis callus.
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Affiliation(s)
- Jie Liu
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China
- Key Laboratory of Plant Physiology and Developmental Regulation, Guizhou Normal University, Guiyang, 550025, Guizhou, People's Republic of China
| | - Xiaomin Wang
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China.
| | - Lei Yang
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Wenbin Nan
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Mengjiao Ruan
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Yurong Bi
- Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China.
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Alternative Pathway is Involved in Nitric Oxide-Enhanced Tolerance to Cadmium Stress in Barley Roots. PLANTS 2019; 8:plants8120557. [PMID: 31795459 PMCID: PMC6963264 DOI: 10.3390/plants8120557] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2019] [Revised: 11/13/2019] [Accepted: 11/25/2019] [Indexed: 12/27/2022]
Abstract
Alternative pathway (AP) has been widely accepted to be involved in enhancing tolerance to various environmental stresses. In this study, the role of AP in response to cadmium (Cd) stress in two barley varieties, highland barley (Kunlun14) and barley (Ganpi6), was investigated. Results showed that the malondialdehyde (MDA) content and electrolyte leakage (EL) level under Cd stress increased in two barley varieties. The expressions of alternative oxidase (AOX) genes (mainly AOX1a), AP capacity (Valt), and AOX protein amount were clearly induced more in Kunlun14 under Cd stress, and these parameters were further enhanced by applying sodium nitroprussid (SNP, a NO donor). Moreover, H2O2 and O2− contents were raised in the Cd-treated roots of two barley varieties, but they were markedly relieved by exogenous SNP. However, this mitigating effect was aggravated by salicylhydroxamic acid (SHAM, an AOX inhibitor), suggesting that AP contributes to NO-enhanced Cd stress tolerance. Further study demonstrated that the effect of SHAM application on reactive oxygen species (ROS)-related scavenging enzymes and antioxidants was minimal. These observations showed that AP exerts an indispensable function in NO-enhanced Cd stress tolerance in two barley varieties. AP was mainly responsible for regulating the ROS accumulation to maintain the homeostasis of redox state.
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He Q, Wang X, He L, Yang L, Wang S, Bi Y. Alternative respiration pathway is involved in the response of highland barley to salt stress. PLANT CELL REPORTS 2019; 38:295-309. [PMID: 30542981 DOI: 10.1007/s00299-018-2366-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Accepted: 12/05/2018] [Indexed: 06/09/2023]
Abstract
Alternative respiration pathway is involved in the response of highland barley to salt stress. The response of two barley seedlings to salt stress was investigated. Results showed that the growth of highland barley (Kunlun 14) and barley (Ganpi 6) had no obvious difference under low concentrations (50, 100 and 200 mM) of NaCl treatment. However, high concentrations of NaCl treatment (300 and 400 mM) severely affected the growth of two barley cultivars. Under 300 mM NaCl treatment, the fresh weight, relative water content (RWC), pigments and K+ content reduced more in Ganpi 6 than in Kunlun 14. In contrast, the electrolyte leakage and the content of MDA, Na+, H2O2 and O2- increased more in Ganpi 6 than in Kunlun 14. The gene expression of AOX1a, HvNHX1, HvNHX3, HvHVP1, HvHVA, H+-ATPase, the alternative respiration capacity (Valt) and the enzymatic activity of SOD, POD, CAT, APX and H+-ATPase increased more in Kunlun14 than in Ganpi6 under 300 mM NaCl treatment, whereas the cytochrome respiration capacity (Vcyt) decreased similarly in both barley cultivars. Western blot analysis showed that the protein level of the alternative oxidase (AOX) increased more in Kunlun 14 than in Ganpi 6 under 300 mM NaCl treatment. Inhibition of the alternative respiration by salicylhydroxamic acid (SHAM) decreased the fresh weight, K+ content, Valt, H+-ATPase activity and the gene expression of AOX1a, HvNHX1, HvNHX3, HvHVP1, HvHVA, H+-ATPase, but increased the electrolyte leakage, MDA and Na+ content in both cultivars under 300 mM NaCl treatment. In short, alternative respiration is involved in the tolerance of highland barley to salt stress.
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Affiliation(s)
- Qiang He
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Xiaomin Wang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Li He
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Lei Yang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Shengwang Wang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Yurong Bi
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, 730000, People's Republic of China.
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12
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Wanniarachchi VR, Dametto L, Sweetman C, Shavrukov Y, Day DA, Jenkins CLD, Soole KL. Alternative Respiratory Pathway Component Genes (AOX and ND) in Rice and Barley and Their Response to Stress. Int J Mol Sci 2018; 19:E915. [PMID: 29558397 PMCID: PMC5877776 DOI: 10.3390/ijms19030915] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2018] [Revised: 03/15/2018] [Accepted: 03/16/2018] [Indexed: 11/24/2022] Open
Abstract
Plants have a non-energy conserving bypass of the classical mitochondrial cytochrome c pathway, known as the alternative respiratory pathway (AP). This involves type II NAD(P)H dehydrogenases (NDs) on both sides of the mitochondrial inner membrane, ubiquinone, and the alternative oxidase (AOX). The AP components have been widely characterised from Arabidopsis, but little is known for monocot species. We have identified all the genes encoding components of the AP in rice and barley and found the key genes which respond to oxidative stress conditions. In both species, AOX is encoded by four genes; in rice OsAOX1a, 1c, 1d and 1e representing four clades, and in barley, HvAOX1a, 1c, 1d1 and 1d2, but no 1e. All three subfamilies of plant ND genes, NDA, NDB and NDC are present in both rice and barley, but there are fewer NDB genes compared to Arabidopsis. Cyanide treatment of both species, along with salt treatment of rice and drought treatment of barley led to enhanced expression of various AP components; there was a high level of co-expression of AOX1a and AOX1d, along with NDB3 during the stress treatments, reminiscent of the co-expression that has been well characterised in Arabidopsis for AtAOX1a and AtNDB2.
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Affiliation(s)
- Vajira R Wanniarachchi
- College of Science and Engineering, Flinders University of South Australia, GPO Box 5100, Adelaide, SA 5001, Australia.
| | - Lettee Dametto
- College of Science and Engineering, Flinders University of South Australia, GPO Box 5100, Adelaide, SA 5001, Australia.
| | - Crystal Sweetman
- College of Science and Engineering, Flinders University of South Australia, GPO Box 5100, Adelaide, SA 5001, Australia.
| | - Yuri Shavrukov
- College of Science and Engineering, Flinders University of South Australia, GPO Box 5100, Adelaide, SA 5001, Australia.
| | - David A Day
- College of Science and Engineering, Flinders University of South Australia, GPO Box 5100, Adelaide, SA 5001, Australia.
| | - Colin L D Jenkins
- College of Science and Engineering, Flinders University of South Australia, GPO Box 5100, Adelaide, SA 5001, Australia.
| | - Kathleen L Soole
- College of Science and Engineering, Flinders University of South Australia, GPO Box 5100, Adelaide, SA 5001, Australia.
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Wang H, Huang J, Li Y, Li C, Hou J, Liang W. Involvement of nitric oxide-mediated alternative pathway in tolerance of wheat to drought stress by optimizing photosynthesis. PLANT CELL REPORTS 2016; 35:2033-44. [PMID: 27294277 DOI: 10.1007/s00299-016-2014-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2016] [Accepted: 06/07/2016] [Indexed: 05/22/2023]
Abstract
KEY MESSAGE NO-mediated alternative pathway plays an important role in protecting wheat seedlings against drought stress through dissipating excessive reducing equivalents generated by photosynthesis. Alternative pathway (AP) has been proven to be involved in responses to various stresses. However, the mechanisms of AP in defense response to drought stress are still lacking. The aims of this work are to investigate the role of AP in drought tolerance and how AP is induced under drought stress using two wheat cultivars with different drought tolerance. Our results showed that Longchun22 cultivar is more tolerant to drought than 98SN146 cultivar. Seedlings exposed to drought led to a significant increase in AP, and it increased more in Longchun22. Furthermore, chlorophyll fluorescence parameters (Fv/Fm, ΦPSII, qP) decreased significantly in drought-treated seedlings, especially in 98SN146, indicating that photoinhibition occurred under drought stress. Pretreatment with SHAM, the malate-oxaloacetate shuttle activity and photosynthetic efficiency were further inhibited in drought-treated seedlings, resulting in more serious oxidative damage as indicated by higher levels of malondialdehyde and hydrogen peroxide. Moreover, NO modulated AP under drought stress by increasing AOX1a expression and pyruvate content. Taken together, these results indicate that NO-mediated AP is involved in optimizing photosynthesis under drought stress by avoiding the over-reduction of photosynthetic electron transport chain, thus reducing reactive oxygen species production and oxidative damage in wheat leaves.
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Affiliation(s)
- Huahua Wang
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, People's Republic of China.
| | - Junjun Huang
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, People's Republic of China
| | - Yan Li
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, People's Republic of China
| | - Changan Li
- Cold and Arid Regions Environmental and Engineering Research Institute, Chinese Academy of Science, Lanzhou, 730000, People's Republic of China
| | - Junjie Hou
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, People's Republic of China
| | - Weihong Liang
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, People's Republic of China
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