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Chernova T, Ageeva M, Ivanov O, Lev-Yadun S, Gorshkova T. Characterization of the fiber-like cortical cells in moss gametophytes. PLANTA 2024; 259:92. [PMID: 38504021 DOI: 10.1007/s00425-024-04367-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Accepted: 02/16/2024] [Indexed: 03/21/2024]
Abstract
MAIN CONCLUSION Fiber-like cells with thickened cell walls of specific structure and polymer composition that includes (1 → 4)-β-galactans develop in the outer stem cortex of several moss species gametophytes. The early land plants evolved several specialized cell types and tissues that did not exist in their aquatic ancestors. Of these, water-conducting elements and reproductive organs have received most of the research attention. The evolution of tissues specialized to fulfill a mechanical function is by far less studied despite their wide distribution in land plants. For vascular plants following a homoiohydric trajectory, the evolutionary emergence of mechanical tissues is mainly discussed starting with the fern-like plants with their hypodermal sterome or sclerified fibers that have xylan and lignin-based cell walls. However, mechanical challenges were also faced by bryophytes, which lack lignified cell-walls. To characterize mechanical tissues in the bryophyte lineage, following a poikilohydric trajectory, we used six wild moss species (Polytrichum juniperinum, Dicranum sp., Rhodobryum roseum, Eurhynchiadelphus sp., Climacium dendroides, and Hylocomium splendens) and analyzed the structure and composition of their cell walls. In all of them, the outer stem cortex of the leafy gametophytic generation had fiber-like cells with a thickened but non-lignified cell wall. Such cells have a spindle-like shape with pointed tips. The additional thick cell wall layer in those fiber-like cells is composed of sublayers with structural evidence for different cellulose microfibril orientation, and with specific polymer composition that includes (1 → 4)-β-galactans. Thus, the basic cellular characters of the cells that provide mechanical support in vascular plant taxa (elongated cell shape, location at the periphery of a primary organ, the thickened cell wall and its peculiar composition and structure) also exist in mosses.
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Affiliation(s)
- Tatyana Chernova
- The Laboratory of Plant Cell Growth Mechanisms, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia.
| | - Marina Ageeva
- Microscopy Cabinet, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia
| | - Oleg Ivanov
- P.N. Lebedev Physical Institute of the Russian Academy of Sciences, Moscow, Russia
| | - Simcha Lev-Yadun
- Department of Biology and Environment, Faculty of Natural Sciences, University of Haifa-Oranim, 36006, Tivon, Israel
| | - Tatyana Gorshkova
- The Laboratory of Plant Cell Growth Mechanisms, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia
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Reda A, Arscott S. Static micromechanical measurements of the flexural modulus and strength of micrometre-diameter single fibres using deflecting microcantilever techniques. Sci Rep 2024; 14:2967. [PMID: 38316899 PMCID: PMC10844317 DOI: 10.1038/s41598-024-53082-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Accepted: 01/27/2024] [Indexed: 02/07/2024] Open
Abstract
The mechanical properties of natural and man-made fibres ultimately govern the robustness of products. Examples range from textiles to composite materials for mechanical parts in emerging technological applications. An accurate determination of the mechanical properties of microscopic single fibres is therefore important. Today, macroscopic mechanical techniques, such as tensile testing, are commonly employed to obtain this information. However, a relatively high dispersion of results is often encountered due to a relatively long sample size. As an alternative to tensile methods, we demonstrate here micromechanical techniques to accurately measure the flexural modulus and strength of micrometre-sized diameter fibres without the need of force sensing. To demonstrate our ideas, we use the example of single natural fibres (Linum Usitatissimum). The flexural modulus of the single fibres is first accurately measured in the low deflection regime of an inclined bending cantilever in an original setup. The flexural strength of the single fibres is then measured in the high deflection regime of a bending cantilever. Interestingly, the novel measurements have allowed the authors to quantify the flexural strength of two different failure modes in flax fibre, enabling a contribution to plant mechanics.
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Affiliation(s)
- Ali Reda
- University of Lille, CNRS, Centrale Lille, University Polytechnique Hauts-de-France, UMR 8520-IEMN, F-59000, Lille, France
| | - Steve Arscott
- University of Lille, CNRS, Centrale Lille, University Polytechnique Hauts-de-France, UMR 8520-IEMN, F-59000, Lille, France.
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Kanapin A, Rozhmina T, Bankin M, Surkova S, Duk M, Osyagina E, Samsonova M. Genetic Determinants of Fiber-Associated Traits in Flax Identified by Omics Data Integration. Int J Mol Sci 2022; 23:ijms232314536. [PMID: 36498863 PMCID: PMC9738745 DOI: 10.3390/ijms232314536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Revised: 11/10/2022] [Accepted: 11/15/2022] [Indexed: 11/23/2022] Open
Abstract
In this paper, we explore potential genetic factors in control of flax phenotypes associated with fiber by mining a collection of 306 flax accessions from the Federal Research Centre of the Bast Fiber Crops, Torzhok, Russia. In total, 11 traits were assessed in the course of 3 successive years. A genome-wide association study was performed for each phenotype independently using six different single-locus models implemented in the GAPIT3 R package. Moreover, we applied a multivariate linear mixed model implemented in the GEMMA package to account for trait correlations and potential pleiotropic effects of polymorphisms. The analyses revealed a number of genomic variants associated with different fiber traits, implying the complex and polygenic control. All stable variants demonstrate a statistically significant allelic effect across all 3 years of the experiment. We tested the validity of the predicted variants using gene expression data available for the flax fiber studies. The results shed new light on the processes and pathways associated with the complex fiber traits, while the pinpointed candidate genes may be further used for marker-assisted selection.
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Affiliation(s)
- Alexander Kanapin
- Centre for Computational Biology, Peter the Great St. Petersburg Polytechnic University, 195251 St. Petersburg, Russia
| | - Tatyana Rozhmina
- Laboratory of Breeding Technologies, Federal Research Center for Bast Fiber Crops, 172002 Torzhok, Russia
| | - Mikhail Bankin
- Mathematical Biology & Bioinformatics Laboratory, Peter the Great St. Petersburg Polytechnic University, 195251 St. Petersburg, Russia
| | - Svetlana Surkova
- Mathematical Biology & Bioinformatics Laboratory, Peter the Great St. Petersburg Polytechnic University, 195251 St. Petersburg, Russia
| | - Maria Duk
- Mathematical Biology & Bioinformatics Laboratory, Peter the Great St. Petersburg Polytechnic University, 195251 St. Petersburg, Russia
- Theoretical Department, Ioffe Institute, 194021 St. Petersburg, Russia
| | - Ekaterina Osyagina
- Mathematical Biology & Bioinformatics Laboratory, Peter the Great St. Petersburg Polytechnic University, 195251 St. Petersburg, Russia
| | - Maria Samsonova
- Mathematical Biology & Bioinformatics Laboratory, Peter the Great St. Petersburg Polytechnic University, 195251 St. Petersburg, Russia
- Correspondence: ; Tel.: +7-812-290-9645
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Medina MC, Sousa-Baena MS, Van Sluys MA, Demarco D. Laticifer growth pattern is guided by cytoskeleton organization. FRONTIERS IN PLANT SCIENCE 2022; 13:971235. [PMID: 36262651 PMCID: PMC9574190 DOI: 10.3389/fpls.2022.971235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Accepted: 08/25/2022] [Indexed: 06/16/2023]
Abstract
Laticifers are secretory structures that produce latex, forming a specialized defense system against herbivory. Studies using anatomical approaches to investigate laticifer growth patterns have described their origin; however, their mode of growth, i.e., whether growth is intrusive or diffuse, remains unclear. Studies investigating how cytoskeleton filaments may influence laticifer shape establishment and growth patterns are lacking. In this study, we combined microtubule immunostaining and developmental anatomy to investigate the growth patterns in different types of laticifers. Standard anatomical methods were used to study laticifer development. Microtubules were labelled through immunolocalization of α-tubulin in three types of laticifers from three different plant species: nonanastomosing (Urvillea ulmacea), anastomosing unbranched with partial degradation of terminal cell walls (Ipomoea nil), and anastomosing branched laticifers with early and complete degradation of terminal cell walls (Asclepias curassavica). In both nonanastomosing and anastomosing laticifers, as well as in differentiating meristematic cells, parenchyma cells and idioblasts, microtubules were perpendicularly aligned to the cell growth axis. The analyses of laticifer microtubule orientation revealed an arrangement that corresponds to those cells that grow diffusely within the plant body. Nonanastomosing and anastomosing laticifers, branched or not, have a pattern which indicates diffuse growth. This innovative study on secretory structures represents a major advance in the knowledge of laticifers and their growth mode.
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Affiliation(s)
| | | | | | - Diego Demarco
- *Correspondence: Maria Camila Medina, ; Diego Demarco,
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Petrova A, Zakharov M, Ageeva M, McKenzie R, Gorshkova T, Deyholos M, Kozlova L. A flax mutant with impaired intrusive growth of phloem and xylem fibres demonstrates constitutive gravitropic response. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2022; 323:111399. [PMID: 35905894 DOI: 10.1016/j.plantsci.2022.111399] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Revised: 07/21/2022] [Accepted: 07/24/2022] [Indexed: 06/15/2023]
Abstract
Intrusive growth is a type of growth in which a cell exceeds the growth rate of its neighbours and intrudes between them, reaching a much greater length. This process provides plant fibres with their exceptional length. Fibres are the most abundant cell type in the mechanical tissues of plants. At the same time, the plant fibres are of fundamental importance for the production of textiles, paper, biocomposites, etc. Here we describe a mutant of flax (reduced fibre 1, rdf) in which intrusive growth of fibres is impaired in both phloem and xylem. In addition to the intrinsic differences in fibre length, the mutant is characterized by a constitutive gravitropic response, mechanical aberrations at the macro- and nanolevels, disruption of the cambium and uneven transition of xylem cells to secondary cell wall formation. Gelatinous cell walls in both phloem and xylem of mutant plants have disturbed structure and reduced elasticity. The existence of this mutant-control pair offers both prospects for finding the molecular players involved in triggering intrusive growth, cell wall thickening and for understanding the principles of plant mechanical tissue functioning.
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Affiliation(s)
- Anna Petrova
- Laboratory of Plant Cell Growth Mechanisms, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str., 2/31, 420111 Kazan, Russia.
| | - Mikhail Zakharov
- Laboratory of Plant Cell Growth Mechanisms, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str., 2/31, 420111 Kazan, Russia.
| | - Marina Ageeva
- Microscopy Cabinet, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str., 2/31, 420111 Kazan, Russia.
| | - Ryan McKenzie
- Department of Biological Sciences, University of Alberta, Edmonton, AB T6E 2L3, Canada.
| | - Tatyana Gorshkova
- Laboratory of Plant Cell Growth Mechanisms, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str., 2/31, 420111 Kazan, Russia.
| | - Michael Deyholos
- Department of Biology, University of British Columbia, Okanagan Campus, Kelowna, BC V1V 1V7, Canada.
| | - Liudmila Kozlova
- Laboratory of Plant Cell Growth Mechanisms, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str., 2/31, 420111 Kazan, Russia.
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Melelli A, Jamme F, Beaugrand J, Bourmaud A. Evolution of the ultrastructure and polysaccharide composition of flax fibres over time: When history meets science. Carbohydr Polym 2022; 291:119584. [DOI: 10.1016/j.carbpol.2022.119584] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Revised: 04/30/2022] [Accepted: 05/04/2022] [Indexed: 11/28/2022]
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Majda M, Kozlova L, Banasiak A, Derba-Maceluch M, Iashchishyn IA, Morozova-Roche LA, Smith RS, Gorshkova T, Mellerowicz EJ. Elongation of wood fibers combines features of diffuse and tip growth. THE NEW PHYTOLOGIST 2021; 232:673-691. [PMID: 33993523 DOI: 10.1111/nph.17468] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Accepted: 04/28/2021] [Indexed: 06/12/2023]
Abstract
Xylem fibers are highly elongated cells that are key constituents of wood, play major physiological roles in plants, comprise an important terrestrial carbon reservoir, and thus have enormous ecological and economic importance. As they develop, from fusiform initials, their bodies remain the same length while their tips elongate and intrude into intercellular spaces. To elucidate mechanisms of tip elongation, we studied the cell wall along the length of isolated, elongating aspen xylem fibers and used computer simulations to predict the forces driving the intercellular space formation required for their growth. We found pectin matrix epitopes (JIM5, LM7) concentrated at the tips where cellulose microfibrils have transverse orientation, and xyloglucan epitopes (CCRC-M89, CCRC-M58) in fiber bodies where microfibrils are disordered. These features are accompanied by changes in cell wall thickness, indicating that while the cell wall elongates strictly at the tips, it is deposited all over fibers. Computer modeling revealed that the intercellular space formation needed for intrusive growth may only require targeted release of cell adhesion, which allows turgor pressure in neighboring fiber cells to 'round' the cells creating spaces. These characteristics show that xylem fibers' elongation involves a distinct mechanism that combines features of both diffuse and tip growth.
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Affiliation(s)
- Mateusz Majda
- Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre (UPSC), Swedish University of Agricultural Sciences, Umeå, 901 83, Sweden
- Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK
| | - Liudmila Kozlova
- Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre (UPSC), Swedish University of Agricultural Sciences, Umeå, 901 83, Sweden
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Centre, Russian Academy of Sciences, Kazan, 420111, Russia
| | - Alicja Banasiak
- Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre (UPSC), Swedish University of Agricultural Sciences, Umeå, 901 83, Sweden
- Department of Plant Developmental Biology, Institute of Experimental Biology, University of Wrocław, Kanonia 6/8, Wrocław, 50-328, Poland
| | - Marta Derba-Maceluch
- Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre (UPSC), Swedish University of Agricultural Sciences, Umeå, 901 83, Sweden
| | - Igor A Iashchishyn
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå, SE-901 87, Sweden
| | | | - Richard S Smith
- Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Centre, Russian Academy of Sciences, Kazan, 420111, Russia
| | - Ewa J Mellerowicz
- Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre (UPSC), Swedish University of Agricultural Sciences, Umeå, 901 83, Sweden
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Kim ES, Choi W, Park SH. The thickening and modification of the galactan-enriched layer during primary phloem fibre development in Cannabis sativa. AOB PLANTS 2021; 13:plab044. [PMID: 34394905 PMCID: PMC8356173 DOI: 10.1093/aobpla/plab044] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Accepted: 07/12/2021] [Indexed: 06/13/2023]
Abstract
Primary phloem fibres (PPFs) have higher fibre quality and are economically more important for the textile sector than secondary phloem fibres. Both the chemical composition and mechanical structure of the secondary cell wall mainly influence the quality of bast fibres. We investigated the thickening of the galactan-enriched (Gn) layer and its modification process into a gelatinous (G)-layer, which is the largest portion of the secondary cell wall, during the development of the PPF in Cannabis sativa. Stem segments of hemp collected at 17, 29, 52 and 62 days after sowing were comparatively examined using light microscopy, scanning electron microscopy and transmission electron microscopy. The initial cells of PPF started the proliferation and differentiation at 17 days, but the secondary cell wall thickening had already commenced before the 29 days. Both the G- and Gn-layer were rapidly added onto the S-layer of PPFs; thus, the secondary cell wall thickness increased approximately 2-fold at 52 days (from the 29-day mark), and 8-fold at 62 days. The cortical microtubule arrays appeared adjacent to the plasma membrane of PPF cells related to the cellulose synthesis. Additionally, cross-sectioned microfibrils were observed on Gn-layer as the cluster of tiny spots. At 62 days, the specific stratification structure consisting of several lamellae occurred on the G-layer of the secondary cell wall. The secondary cell wall thickened remarkably at 52 days through 62 days so that the mature secondary cell wall consisted of three distinctive layers, the S-, G- and Gn-layer. Cortical microtubule arrays frequently appeared adjacent to the plasma membrane together with cellulose microfibrils on secondary cell wall. The G-layer of PPF at 62 days exhibited the characteristic stratification structure, which demonstrates the modification of the Gn-layer into the G-layer.
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Affiliation(s)
- Eun-Soo Kim
- Institute of Cannabis Research, Colorado State University-Pueblo, Pueblo, CO 81001-4901, USA
| | - Wonkyun Choi
- Division of Ecological Safety, National Institute of Ecology, Seocheon 33657, South Korea
| | - Sang-Hyuck Park
- Institute of Cannabis Research, Colorado State University-Pueblo, Pueblo, CO 81001-4901, USA
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Abstract
Plant fibres and especially flax can be distinguished from most synthetic fibres by their intricate shape and intrinsic porosity called lumen, which is usually assumed to be tubular. However, the real shape appears more complex and thus might induce stress concentrations influencing the fibre performance. This study proposes a novel representation of flax fibre lumen and its variations along the fibre, an interpretation of its origin and effect on flax fibre tensile properties. This investigation was conducted at the crossroads of complementary characterization techniques: optical and scanning electron microscopy (SEM), high-resolution X-ray microtomography (µCT) and mechanical tests at the cell-wall and fibre scale by atomic force microscopy (AFM) in Peak-Force Quantitative Nano-Mechanical property mapping (PF-QNM) mode and micromechanical tensile testing. Converging results highlight the difficulty of drawing a single geometric reference for the lumen. AFM and optical microscopy depict central cavities of different sizes and shapes. Porosity contents, varying from 0.4 to 7.2%, are estimated by high-resolution µCT. Furthermore, variations of lumen size are reported along the fibres. This intricate lumen shape might originate from the cell wall thickening and cell death but particular attention should also be paid to the effects of post mortem processes such as drying, retting and mechanical extraction of the fibre as well as sample preparation. Finally, SEM observation following tensile testing demonstrates the combined effect of geometrical inhomogeneities such as defects and intricate lumen porosity to drive the failure of the fibre.
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Galinousky D, Mokshina N, Padvitski T, Ageeva M, Bogdan V, Kilchevsky A, Gorshkova T. The Toolbox for Fiber Flax Breeding: A Pipeline From Gene Expression to Fiber Quality. Front Genet 2020; 11:589881. [PMID: 33281880 PMCID: PMC7690631 DOI: 10.3389/fgene.2020.589881] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Accepted: 10/22/2020] [Indexed: 01/22/2023] Open
Abstract
The goal of any plant breeding program is to improve quality of a target crop. Crop quality is a comprehensive feature largely determined by biological background. To improve the quality parameters of crops grown for the production of fiber, a functional approach was used to search for genes suitable for the effective manipulation of technical fiber quality. A key step was to identify genes with tissue and stage-specific pattern of expression in the developing fibers. In the current study, we investigated the relationship between gene expression evaluated in bast fibers of developing flax plants and the quality parameters of technical fibers measured after plant harvesting. Based on previously published transcriptomic data, two sets of genes that are upregulated in fibers during intrusive growth and tertiary cell wall deposition were selected. The expression level of the selected genes and fiber quality parameters were measured in fiber flax, linseed (oil flax) cultivars, and wild species that differ in type of yield and fiber quality parameters. Based on gene expression data, linear regression models for technical stem length, fiber tensile strength, and fiber flexibility were constructed, resulting in the identification of genes that have high potential for manipulating fiber quality. Chromosomal localization and single nucleotide polymorphism distribution in the selected genes were characterized for the efficacy of their use in conventional breeding and genome editing programs. Transcriptome-based selection is a highly targeted functional approach that could be used during the development of new cultivars of various crops.
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Affiliation(s)
- Dmitry Galinousky
- Laboratory of Plant Glycobiology, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia
- Laboratory of Ecological Genetics and Biotechnology, Institute of Genetics and Cytology, The National Academy of Sciences of Belarus, Minsk, Belarus
| | - Natalia Mokshina
- Laboratory of Plant Glycobiology, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia
| | - Tsimafei Padvitski
- Cellular Network and Systems Biology Group, University of Cologne, CECAD, Cologne, Germany
| | - Marina Ageeva
- Laboratory of Microscopy, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia
| | - Victor Bogdan
- Laboratory of Fiber Flax Breeding, Institute of Flax, Ustie, Belarus
| | - Alexander Kilchevsky
- Laboratory of Ecological Genetics and Biotechnology, Institute of Genetics and Cytology, The National Academy of Sciences of Belarus, Minsk, Belarus
| | - Tatyana Gorshkova
- Laboratory of Plant Cell Growth Mechanisms, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia
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Genome-wide identification of fasciclin-like arabinogalactan proteins in jute and their expression pattern during fiber formation. Mol Biol Rep 2020; 47:7815-7829. [PMID: 33011893 DOI: 10.1007/s11033-020-05858-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 09/23/2020] [Indexed: 10/23/2022]
Abstract
Fasciclin-like arabinogalactan proteins (FLAs), a class of arabinogalactan proteins (AGPs) are involved in plant growth and development via cell communication and adhesion. FLAs were also associated with fiber and wood formation in plants but no information is available about the roles of FLA proteins during fibre development of jute. Here, we performed molecular characterization, evolutionary relationship and expression profiling of FLAs proteins in jute (Corchorus olitorius). In total, nineteen CoFLA genes have been identified in jute genome, which were divided into four classes like FLAs of other species based on protein structure and similarity. All CoFLAs have N-terminal signal peptide and one or two FAS domain while two FLAs lack well defined AGP region and eight FLAs were devoid of C-terminal glycosylphosphatidylinositol (GPI) anchor. Expression analysis of different regions of jute stem suggested their involvement in different fiber development stages. Four genes CoFLA 11, 12, 20, and 23 were highly or predominately expressed in fiber containing bark tissues while the expression levels of six CoFLA genes 02, 03, 04, 06, 14 and 19 were comparatively higher in stick. Higher transcripts levels of CoFLA 12 and 20 in the middle bark tissues suggest their involvement in fiber elongation. In contrast, the CoFLA 11 and 23 were more expressed in bottom bark tissues suggesting their potential involvement in secondary cell wall synthesis. Our study can serve as solid foundation for further functional exploration of FLAs and in future breeding program of jute aiming fiber improvement.
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Guerriero G, Piasecki E, Berni R, Xu X, Legay S, Hausman JF. Identification of Callose Synthases in Stinging Nettle and Analysis of Their Expression in Different Tissues. Int J Mol Sci 2020; 21:ijms21113853. [PMID: 32481765 PMCID: PMC7313033 DOI: 10.3390/ijms21113853] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2020] [Revised: 05/27/2020] [Accepted: 05/27/2020] [Indexed: 11/29/2022] Open
Abstract
Callose is an important biopolymer of β-1,3-linked glucose units involved in different phases of plant development, reproduction and response to external stimuli. It is synthesized by glycosyltransferases (GTs) known as callose synthases (CalS) belonging to family 48 in the Carbohydrate-Active enZymes (CAZymes) database. These GTs are anchored to the plasma membrane via transmembrane domains. Several genes encoding CalS have been characterized in higher plants with 12 reported in the model organism Arabidopsis thaliana. Recently, the de novo transcriptome of a fibre-producing clone of stinging nettle (Urtica dioica L.) was published and here it is mined for CalS genes with the aim of identifying members differentially expressed in the core and cortical tissues of the stem. The goal is to understand whether specific CalS genes are associated with distinct developmental stages of the stem internodes (elongation, thickening). Nine genes, eight of which encoding full-length CalS, are identified in stinging nettle. The phylogenetic analysis with CalS proteins from other fibre crops, namely textile hemp and flax, reveals grouping into 6 clades. The expression profiles in nettle tissues (roots, leaves, stem internodes sampled at different heights) reveal differences that are most noteworthy in roots vs. leaves. Two CalS are differentially expressed in the internodes sampled at the top and middle of the stem. Implications of their role in nettle stem tissue development are discussed.
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Affiliation(s)
- Gea Guerriero
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology, 5, rue Bommel, Z.A.E. Robert Steichen, L-4940 Hautcharage, Luxembourg; (E.P.); (X.X.); (S.L.); (J.-F.H.)
- Correspondence: ; Tel.: +352-275-888-5096; Fax: +352-275-8885
| | - Emilie Piasecki
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology, 5, rue Bommel, Z.A.E. Robert Steichen, L-4940 Hautcharage, Luxembourg; (E.P.); (X.X.); (S.L.); (J.-F.H.)
| | - Roberto Berni
- Department of Life Sciences, University of Siena, via P.A. Mattioli 4, I-53100 Siena, Italy;
| | - Xuan Xu
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology, 5, rue Bommel, Z.A.E. Robert Steichen, L-4940 Hautcharage, Luxembourg; (E.P.); (X.X.); (S.L.); (J.-F.H.)
| | - Sylvain Legay
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology, 5, rue Bommel, Z.A.E. Robert Steichen, L-4940 Hautcharage, Luxembourg; (E.P.); (X.X.); (S.L.); (J.-F.H.)
| | - Jean-Francois Hausman
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology, 5, rue Bommel, Z.A.E. Robert Steichen, L-4940 Hautcharage, Luxembourg; (E.P.); (X.X.); (S.L.); (J.-F.H.)
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Guerriero G, Deshmukh R, Sonah H, Sergeant K, Hausman JF, Lentzen E, Valle N, Siddiqui KS, Exley C. Identification of the aquaporin gene family in Cannabis sativa and evidence for the accumulation of silicon in its tissues. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2019; 287:110167. [PMID: 31481224 DOI: 10.1016/j.plantsci.2019.110167] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2019] [Revised: 06/03/2019] [Accepted: 06/07/2019] [Indexed: 05/08/2023]
Abstract
Cannabis sativa is an economically important crop providing bast fibres for the textile and biocomposite sector. Length is a fundamental characteristic determining the properties of bast fibres. Aquaporins, channel-forming proteins facilitating the passage of water, urea, as well as elements such as boron and silicon, are known to play a role in the control of fibre length in other species, like cotton. By mining the available genome, we here identify, for the first time, the aquaporin gene family of C. sativa. The analysis of published RNA-Seq data and targeted qPCR on a textile variety reveal an organ-specific expression of aquaporin genes. Computational analyses, including homology-based search, phylogeny and protein modelling, identify two NOD26-like intrinsic proteins harbouring the Gly-Ser-Gly-Arg (GSGR) aromatic/Arg selectivity filter and 108 amino acid NPA (Asn-Pro-Ala) spacing, features reported to be associated with silicon permeability. SIMS nano-analysis and silica extraction coupled to fluorescence microscopy performed on hemp plantlets reveal the presence of silicon in the bast fibres of the hypocotyl and in leaves. The accumulation of silica in the distal cell walls of bast fibres and in the basal cells of leaf trichomes is indicative of a mechanical role.
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Affiliation(s)
- Gea Guerriero
- Research and Innovation Department, Luxembourg Institute of Science and Technology, 5 Avenue des Hauts-Fourneaux, L-4362, Esch/Alzette, Luxembourg.
| | - Rupesh Deshmukh
- National Agri-Food Biotechnology Institute (NABI), Sector-81 (Knowledge City), P.O. Manauli, S.A.S. Nagar, Mohali, 140306, Punjab, India
| | - Humira Sonah
- National Agri-Food Biotechnology Institute (NABI), Sector-81 (Knowledge City), P.O. Manauli, S.A.S. Nagar, Mohali, 140306, Punjab, India
| | - Kjell Sergeant
- Research and Innovation Department, Luxembourg Institute of Science and Technology, 5 Avenue des Hauts-Fourneaux, L-4362, Esch/Alzette, Luxembourg
| | - Jean-Francois Hausman
- Research and Innovation Department, Luxembourg Institute of Science and Technology, 5 Avenue des Hauts-Fourneaux, L-4362, Esch/Alzette, Luxembourg
| | - Esther Lentzen
- Research and Innovation Department, Luxembourg Institute of Science and Technology, 5 Avenue des Hauts-Fourneaux, L-4362, Esch/Alzette, Luxembourg
| | - Nathalie Valle
- Research and Innovation Department, Luxembourg Institute of Science and Technology, 5 Avenue des Hauts-Fourneaux, L-4362, Esch/Alzette, Luxembourg
| | - Khawar Sohail Siddiqui
- Life Sciences Department, King Fahd University of Petroleum and Minerals (KFUPM), 31261, Dhahran, Saudi Arabia
| | - Christopher Exley
- The Birchall Centre, Lennard Jones Laboratories, Keele University, Keele, Staffordshire, ST5 5BG, UK
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Hunziker P, Halkier BA, Schulz A. Arabidopsis glucosinolate storage cells transform into phloem fibres at late stages of development. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4305-4317. [PMID: 30976798 PMCID: PMC6698705 DOI: 10.1093/jxb/erz176] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2018] [Accepted: 04/05/2019] [Indexed: 05/17/2023]
Abstract
The phloem cap of Arabidopsis thaliana accumulates glucosinolates that yield toxic catabolites upon damage-induced hydrolysis. These defence compounds are stored in high concentrations in millimetre long S-cells. At early stages of development, S-cells initiate a process indicative of programmed cell death. How these cells are maintained in a highly turgescent state following this process is currently unknown. Here, we show that S-cells undergo substantial morphological changes during early differentiation. Vacuolar collapse and rapid clearance of the cytoplasm did not occur until senescence. Instead, smooth endoplasmic reticulum, Golgi bodies, vacuoles, and undifferentiated plastids were observed. Lack of chloroplasts indicates that S-cells depend on metabolite supply from neighbouring cells. Interestingly, TEM revealed numerous plasmodesmata between S-cells and neighbouring cells. Photoactivation of a symplasmic tracer showed coupling with neighbouring cells that are involved in glucosinolate synthesis. Hence, symplasmic transport might contribute to glucosinolate storage in S-cells. To investigate the fate of S-cells, we traced them in flower stalks from the earliest detectable stages to senescence. At late stages, S-cells were shown to deposit thick secondary cell walls and transform into phloem fibres. Thus, phloem fibres in the herbaceous plant Arabidopsis pass a pronounced phase of chemical defence during early stages of development.
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Affiliation(s)
- Pascal Hunziker
- Department of Plant and Environmental Sciences, DynaMo Center, University of Copenhagen, Thorvaldsensvej, Frederiksberg C, Denmark
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15
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Xu X, Backes A, Legay S, Berni R, Faleri C, Gatti E, Hausman J, Cai G, Guerriero G. Cell wall composition and transcriptomics in stem tissues of stinging nettle ( Urtica dioica L.): Spotlight on a neglected fibre crop. PLANT DIRECT 2019; 3:e00151. [PMID: 31417976 PMCID: PMC6689792 DOI: 10.1002/pld3.151] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Revised: 06/18/2019] [Accepted: 06/21/2019] [Indexed: 06/01/2023]
Abstract
Stinging nettle (Urtica dioica L.) produces silky cellulosic fibres, as well as bioactive molecules. To improve the knowledge on nettle and enhance its opportunities of exploitation, a draft transcriptome of the "clone 13" (a fibre clone) is here presented. The transcriptome of whole internodes sampled at the top and middle of the stem is then compared with the core and cortical tissues sampled at the bottom. Young internodes show an enrichment in genes involved in the biosynthesis of phytohormones (auxins and jasmonic acid) and secondary metabolites (flavonoids). The core of internodes collected at the bottom of the stem is enriched in genes partaking in different aspects of secondary cell wall formation (cellulose, hemicellulose, lignin biosynthesis), while the cortical tissues reveal the presence of a C starvation signal probably due to the UDP-glucose demand necessary for the thickening phase of bast fibres. Cell wall analysis indicates a difference in rhamnogalacturonan structure/composition of mature bast fibres, as evidenced by the higher levels of galactose measured, as well as the occurrence of more water-soluble pectins in elongating internodes. The targeted quantification of phenolics shows that the middle internode and the cortical tissues at the bottom have higher contents than top internodes. Ultrastructural analyses reveal the presence of a gelatinous layer in bast fibres with a lamellar structure. The data presented will be an important resource and reference for future molecular studies on a neglected fibre crop.
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Affiliation(s)
- Xuan Xu
- Environmental Research and Innovation (ERIN) DepartmentLuxembourg Institute of Science and Technology (LIST)Esch/AlzetteLuxembourg
| | - Aurélie Backes
- Environmental Research and Innovation (ERIN) DepartmentLuxembourg Institute of Science and Technology (LIST)Esch/AlzetteLuxembourg
- Present address:
Unité de Recherche Résistance Induite et BioProtection des PlantesUFR Sciences Exactes et NaturellesSFR Condorcet FR CNRS 3417Université de Reims‐Champagne‐ArdenneReims Cedex 2France
| | - Sylvain Legay
- Environmental Research and Innovation (ERIN) DepartmentLuxembourg Institute of Science and Technology (LIST)Esch/AlzetteLuxembourg
| | - Roberto Berni
- Department of Life SciencesUniversity of SienaSienaItaly
- Trees and Timber Institute‐National Research Council of Italy (CNR‐IVALSA)FollonicaItaly
| | - Claudia Faleri
- Department of Life SciencesUniversity of SienaSienaItaly
| | - Edoardo Gatti
- Institute of Biometeorology (IBIMET)National Research CouncilBolognaItaly
| | - Jean‐Francois Hausman
- Environmental Research and Innovation (ERIN) DepartmentLuxembourg Institute of Science and Technology (LIST)Esch/AlzetteLuxembourg
| | - Giampiero Cai
- Department of Life SciencesUniversity of SienaSienaItaly
| | - Gea Guerriero
- Environmental Research and Innovation (ERIN) DepartmentLuxembourg Institute of Science and Technology (LIST)Esch/AlzetteLuxembourg
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16
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Yu Y, Wu S, Nowak J, Wang G, Han L, Feng Z, Mendrinna A, Ma Y, Wang H, Zhang X, Tian J, Dong L, Nikoloski Z, Persson S, Kong Z. Live-cell imaging of the cytoskeleton in elongating cotton fibres. NATURE PLANTS 2019; 5:498-504. [PMID: 31040442 DOI: 10.1038/s41477-019-0418-8] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2018] [Accepted: 03/18/2019] [Indexed: 05/23/2023]
Abstract
Cotton (Gossypium hirsutum) fibres consist of single cells that grow in a highly polarized manner, assumed to be controlled by the cytoskeleton1-3. However, how the cytoskeletal organization and dynamics underpin fibre development remains unexplored. Moreover, it is unclear whether cotton fibres expand via tip growth or diffuse growth2-4. We generated stable transgenic cotton plants expressing fluorescent markers of the actin and microtubule cytoskeleton. Live-cell imaging revealed that elongating cotton fibres assemble a cortical filamentous actin network that extends along the cell axis to finally form actin strands with closed loops in the tapered fibre tip. Analyses of F-actin network properties indicate that cotton fibres have a unique actin organization that blends features of both diffuse and tip growth modes. Interestingly, typical actin organization and endosomal vesicle aggregation found in tip-growing cell apices were not observed in fibre tips. Instead, endomembrane compartments were evenly distributed along the elongating fibre cells and moved bi-directionally along the fibre shank to the fibre tip. Moreover, plus-end tracked microtubules transversely encircled elongating fibre shanks, reminiscent of diffusely growing cells. Collectively, our findings indicate that cotton fibres elongate via a unique tip-biased diffuse growth mode.
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Affiliation(s)
- Yanjun Yu
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Shenjie Wu
- Cotton Research Institute, Shanxi Academy of Agricultural Sciences, Yucheng, China
| | - Jacqueline Nowak
- School of Biosciences, University of Melbourne, Melbourne, Victoria, Australia
- Systems Biology and Mathematical Modeling, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany
- Bioinformatics, Institute of Biochemistry and Biology, University of Potsdam, Potsdam, Germany
| | - Guangda Wang
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Libo Han
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Zhidi Feng
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Amelie Mendrinna
- School of Biosciences, University of Melbourne, Melbourne, Victoria, Australia
| | - Yinping Ma
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Huan Wang
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Xiaxia Zhang
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Juan Tian
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Li Dong
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Zoran Nikoloski
- Systems Biology and Mathematical Modeling, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany
- Bioinformatics, Institute of Biochemistry and Biology, University of Potsdam, Potsdam, Germany
| | - Staffan Persson
- School of Biosciences, University of Melbourne, Melbourne, Victoria, Australia.
| | - Zhaosheng Kong
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Academy of Seed Design, Chinese Academy of Sciences, Beijing, China.
- University of Chinese Academy of Sciences, Beijing, China.
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17
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Goudenhooft C, Bourmaud A, Baley C. Flax ( Linum usitatissimum L.) Fibers for Composite Reinforcement: Exploring the Link Between Plant Growth, Cell Walls Development, and Fiber Properties. FRONTIERS IN PLANT SCIENCE 2019; 10:411. [PMID: 31001310 PMCID: PMC6456768 DOI: 10.3389/fpls.2019.00411] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2018] [Accepted: 03/19/2019] [Indexed: 05/13/2023]
Abstract
Due to the combination of high mechanical performances and plant-based origin, flax fibers are interesting reinforcement for environmentally friendly composite materials. An increasing amount of research articles and reviews focuses on the processing and properties of flax-based products, without taking into account the original key role of flax fibers, namely, reinforcement elements of the flax stem (Linum usitatissimum L.). The ontogeny of the plant, scattering of fiber properties along the plant, or the plant growth conditions are rarely considered. Conversely, exploring the development of flax fibers and parameters influencing the plant mechanical properties (at the whole plant or fiber scale) could be an interesting way to control and/or optimize fiber performances, and to a greater extent, flax fiber-based products. The first part of the present review synthesized the general knowledge about the growth stages of flax plants and the internal organization of the stem biological tissues. Additionally, key findings regarding the development of its fibers, from elongation to thickening, are reviewed to offer a piece of explanation of the uncommon morphological properties of flax fibers. Then, the slenderness of flax is illustrated by comparison of data given in scientific research on herbaceous plants and woody ones. In the second section, a state of the art of the varietal selection of several main industrial crops is given. This section includes the different selection criteria as well as an overview of their impact on plant characteristics. A particular interest is given to the lodging resistance and the understanding of this undesired phenomenon. The third section reviews the influence of the cultural conditions, including seedling rate and its relation with the wind in a plant canopy, as well as the impact of main tropisms (namely, thigmotropism, seismotropism, and gravitropism) on the stem and fiber characteristics. This section illustrates the mechanisms of plant adaptation, and how the environment can modify the plant biomechanical properties. Finally, this review asks botanists, breeders, and farmers' knowledge toward the selection of potential flax varieties dedicated to composite applications, through optimized fiber performances. All along the paper, both fibers morphology and mechanical properties are discussed, in constant link with their use for composite materials reinforcement.
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Affiliation(s)
| | - Alain Bourmaud
- IRDL, UMR CNRS 6027, Université de Bretagne Sud, Lorient, France
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18
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Gorshkov O, Chernova T, Mokshina N, Gogoleva N, Suslov D, Tkachenko A, Gorshkova T. Intrusive Growth of Phloem Fibers in Flax Stem: Integrated Analysis of miRNA and mRNA Expression Profiles. PLANTS (BASEL, SWITZERLAND) 2019; 8:E47. [PMID: 30791461 PMCID: PMC6409982 DOI: 10.3390/plants8020047] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/13/2018] [Revised: 02/13/2019] [Accepted: 02/14/2019] [Indexed: 12/21/2022]
Abstract
Phloem fibers are important elements of plant architecture and the target product of many fiber crops. A key stage in fiber development is intrusive elongation, the mechanisms of which are largely unknown. Integrated analysis of miRNA and mRNA expression profiles in intrusivelygrowing fibers obtained by laser microdissection from flax (Linum usitatissimum L.) stem revealed all 124 known flax miRNA from 23 gene families and the potential targets of differentially expressed miRNAs. A comparison of the expression between phloem fibers at different developmental stages, and parenchyma and xylem tissues demonstrated that members of miR159, miR166, miR167, miR319, miR396 families were down-regulated in intrusively growing fibers. Some putative target genes of these miRNA families, such as those putatively encoding growth-regulating factors, an argonaute family protein, and a homeobox-leucine zipper family protein were up-regulated in elongating fibers. miR160, miR169, miR390, and miR394 showed increased expression. Changes in the expression levels of miRNAs and their target genes did not match expectations for the majority of predicted target genes. Taken together, poorly understood intrusive fiber elongation, the key process of phloem fiber development, was characterized from a miRNA-target point of view, giving new insights into its regulation.
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Affiliation(s)
- Oleg Gorshkov
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky Str., 2/31, 420111 Kazan, Russia.
| | - Tatyana Chernova
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky Str., 2/31, 420111 Kazan, Russia.
| | - Natalia Mokshina
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky Str., 2/31, 420111 Kazan, Russia.
| | - Natalia Gogoleva
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky Str., 2/31, 420111 Kazan, Russia.
- Laboratory of Extreme Biology, Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kremlyovskaya Str., 18, 420021 Kazan, Russia.
| | - Dmitry Suslov
- Department of Plant Physiology and Biochemistry, Faculty of Biology, Saint Petersburg State University, Universiteskaya emb., 7/9, 199034 Saint Petersburg, Russia.
| | - Alexander Tkachenko
- Department of Genetics and Biotechnology, Faculty of Biology, Saint Petersburg State University, Universiteskaya emb., 7/9, 199034 Saint Petersburg, Russia.
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky Str., 2/31, 420111 Kazan, Russia.
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19
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Gorshkova T, Chernova T, Mokshina N, Gorshkov V, Kozlova L, Gorshkov O. Transcriptome Analysis of Intrusively Growing Flax Fibers Isolated by Laser Microdissection. Sci Rep 2018; 8:14570. [PMID: 30275452 PMCID: PMC6167358 DOI: 10.1038/s41598-018-32869-2] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2018] [Accepted: 09/18/2018] [Indexed: 11/19/2022] Open
Abstract
The intrusive growth, a type of plant cell elongation occurring in the depths of plant tissues, is characterized by the invasion of a growing cell between its neighbours due to a higher rate of elongation. In order to reveal the largely unknown molecular mechanisms of intrusive growth, we isolated primary flax phloem fibers specifically at the stage of intrusive growth by laser microdissection. The comparison of the RNA-Seq data from several flax stem parts enabled the characterization of those processes occurring specifically during the fiber intrusive elongation. The revealed molecular players are summarized as those involved in the supply of assimilates and support of turgor pressure, cell wall enlargement and modification, regulation by transcription factors and hormones, and responses to abiotic stress factors. The data obtained in this study provide a solid basis for developing approaches to manipulate fiber intrusive elongation, which is of importance both for plant biology and the yield of fiber crops.
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Affiliation(s)
- Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center "Kazan Scientific Center of RAS" 420111, Lobachevsky Str., 2/31, Kazan, Russian Federation.
| | - Tatyana Chernova
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center "Kazan Scientific Center of RAS" 420111, Lobachevsky Str., 2/31, Kazan, Russian Federation
| | - Natalia Mokshina
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center "Kazan Scientific Center of RAS" 420111, Lobachevsky Str., 2/31, Kazan, Russian Federation
| | - Vladimir Gorshkov
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center "Kazan Scientific Center of RAS" 420111, Lobachevsky Str., 2/31, Kazan, Russian Federation
| | - Liudmila Kozlova
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center "Kazan Scientific Center of RAS" 420111, Lobachevsky Str., 2/31, Kazan, Russian Federation
| | - Oleg Gorshkov
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center "Kazan Scientific Center of RAS" 420111, Lobachevsky Str., 2/31, Kazan, Russian Federation
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20
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Key Stages of Fiber Development as Determinants of Bast Fiber Yield and Quality. FIBERS 2018. [DOI: 10.3390/fib6020020] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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21
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Baley C, Goudenhooft C, Gibaud M, Bourmaud A. Flax stems: from a specific architecture to an instructive model for bioinspired composite structures. BIOINSPIRATION & BIOMIMETICS 2018; 13:026007. [PMID: 29319533 DOI: 10.1088/1748-3190/aaa6b7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
The present paper proposes to carefully study and describe the reinforcement mechanisms within a flax stem, which is an exceptional natural model of composite structure. Thanks to accurate microscopic investigations, with both optical and SEM method, we finely depicted the flax stem architecture, which can be view as a composite structure with an outer protection, a unidirectional ply on the periphery and a porous core; each component has a specific function, such as mechanical reinforcement for the unidirectional ply and the porous core. The significant mechanical role of fibres was underlined, as well as their local organisation in cohesive bundles, obtained because of an intrusive growth and evidenced in this work through nanomechanical AFM measurement and 3D reconstruction. Following a biomimetic approach, these data provide a source of inspiration for the composite materials of tomorrow.
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Affiliation(s)
- Christophe Baley
- Université de Bretagne Sud, FRE CNRS 3744, IRDL, F-56100 Lorient, France
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22
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Gorshkov O, Mokshina N, Ibragimova N, Ageeva M, Gogoleva N, Gorshkova T. Phloem fibres as motors of gravitropic behaviour of flax plants: level of transcriptome. FUNCTIONAL PLANT BIOLOGY : FPB 2018; 45:203-214. [PMID: 32291034 DOI: 10.1071/fp16348] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2016] [Accepted: 01/16/2017] [Indexed: 05/25/2023]
Abstract
Restoration of stem vertical position after plant inclination is a widely spread version of plant orientation in accordance with gravity vector direction. Gravitropic behaviour of flax plants involves the formation of curvature in stem region that has ceased elongation long in advance of stem inclination. The important participants of such behaviour are phloem fibres with constitutively formed tertiary cell wall (G-layer). We performed the large-scale transcriptome profiling of phloem fibres isolated from pulling and opposite sides of gravitropic curvature and compared with control plant fibres. Significant changes in transcript abundance take place for genes encoding proteins of several ion channels, transcription factors and other regulating elements. The largest number of upregulated genes belonged to the cell wall category; many of those were specifically upregulated in fibres of pulling stem side. The obtained data permit to suggest the mechanism of fibre participation in gravitropic reaction that involves the increase of turgor pressure and the rearrangements of cell wall structure in order to improve contractile properties, and to identify the regulatory elements that operate specifically in the fibres of the pulling stem side making gelatinous phloem fibres an important element of gravitropic response in herbaceous plants.
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Affiliation(s)
- Oleg Gorshkov
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Natalia Mokshina
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Nadezda Ibragimova
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Marina Ageeva
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Natalia Gogoleva
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
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23
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Gavazzi F, Pigna G, Braglia L, Gianì S, Breviario D, Morello L. Evolutionary characterization and transcript profiling of β-tubulin genes in flax (Linum usitatissimum L.) during plant development. BMC PLANT BIOLOGY 2017; 17:237. [PMID: 29221437 PMCID: PMC5721616 DOI: 10.1186/s12870-017-1186-0] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2017] [Accepted: 11/29/2017] [Indexed: 05/19/2023]
Abstract
BACKGROUND Microtubules, polymerized from alpha and beta-tubulin monomers, play a fundamental role in plant morphogenesis, determining the cell division plane, the direction of cell expansion and the deposition of cell wall material. During polarized pollen tube elongation, microtubules serve as tracks for vesicular transport and deposition of proteins/lipids at the tip membrane. Such functions are controlled by cortical microtubule arrays. Aim of this study was to first characterize the flax β-tubulin family by sequence and phylogenetic analysis and to investigate differential expression of β-tubulin genes possibly related to fibre elongation and to flower development. RESULTS We report the cloning and characterization of the complete flax β-tubulin gene family: exon-intron organization, duplicated gene comparison, phylogenetic analysis and expression pattern during stem and hypocotyl elongation and during flower development. Sequence analysis of the fourteen expressed β-tubulin genes revealed that the recent whole genome duplication of the flax genome was followed by massive retention of duplicated tubulin genes. Expression analysis showed that β-tubulin mRNA profiles gradually changed along with phloem fibre development in both the stem and hypocotyl. In flowers, changes in relative tubulin transcript levels took place at anthesis in anthers, but not in carpels. CONCLUSIONS Phylogenetic analysis supports the origin of extant plant β-tubulin genes from four ancestral genes pre-dating angiosperm separation. Expression analysis suggests that particular tubulin subpopulations are more suitable to sustain different microtubule functions such as cell elongation, cell wall thickening or pollen tube growth. Tubulin genes possibly related to different microtubule functions were identified as candidate for more detailed studies.
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Affiliation(s)
- Floriana Gavazzi
- Istituto Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, Via A. Corti, 12, Milan, 20133 Italy
| | - Gaia Pigna
- Istituto Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, Via A. Corti, 12, Milan, 20133 Italy
| | - Luca Braglia
- Istituto Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, Via A. Corti, 12, Milan, 20133 Italy
| | - Silvia Gianì
- Istituto Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, Via A. Corti, 12, Milan, 20133 Italy
| | - Diego Breviario
- Istituto Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, Via A. Corti, 12, Milan, 20133 Italy
| | - Laura Morello
- Istituto Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, Via A. Corti, 12, Milan, 20133 Italy
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Guerriero G, Behr M, Legay S, Mangeot-Peter L, Zorzan S, Ghoniem M, Hausman JF. Transcriptomic profiling of hemp bast fibres at different developmental stages. Sci Rep 2017; 7:4961. [PMID: 28694530 PMCID: PMC5504027 DOI: 10.1038/s41598-017-05200-8] [Citation(s) in RCA: 52] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2017] [Accepted: 05/24/2017] [Indexed: 02/08/2023] Open
Abstract
Bast fibres are long extraxylary cells which mechanically support the phloem and they are divided into xylan- and gelatinous-type, depending on the composition of their secondary cell walls. The former, typical of jute/kenaf bast fibres, are characterized by the presence of xylan and a high degree of lignification, while the latter, found in tension wood, as well as flax, ramie and hemp bast fibres, have a high abundance of crystalline cellulose. During their differentiation, bast fibres undergo specific developmental stages: the cells initially elongate rapidly by intrusive growth, subsequently they cease elongation and start to thicken. The goal of the present study is to provide a transcriptomic close-up of the key events accompanying bast fibre development in textile hemp (Cannabis sativa L.), a fibre crop of great importance. Bast fibres have been sampled from different stem regions. The developmental stages corresponding to active elongation and cell wall thickening have been studied using RNA-Seq. The results show that the fibres sampled at each stem region are characterized by a specific transcriptomic signature and that the major changes in cell wall-related processes take place at the internode containing the snap point. The data generated also identify several interesting candidates for future functional analysis.
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Affiliation(s)
- Gea Guerriero
- Luxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, L-4362, Luxembourg.
| | - Marc Behr
- Luxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, L-4362, Luxembourg
- Université catholique de Louvain, Groupe de Recherche en Physiologie Végétale, Earth and Life Institute-Agronomy, Louvain-la-Neuve, B-1348, Belgium
| | - Sylvain Legay
- Luxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, L-4362, Luxembourg
| | - Lauralie Mangeot-Peter
- Luxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, L-4362, Luxembourg
- Institut National de la Recherche Agronomique, Université de Lorraine, UMR 1136, Interactions Arbres-Microorganismes, Champenoux, F-54280, France
| | - Simone Zorzan
- Luxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, L-4362, Luxembourg
| | - Mohammad Ghoniem
- Luxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, L-4362, Luxembourg
| | - Jean-Francois Hausman
- Luxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, L-4362, Luxembourg
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Gorshkov O, Mokshina N, Gorshkov V, Chemikosova S, Gogolev Y, Gorshkova T. Transcriptome portrait of cellulose-enriched flax fibres at advanced stage of specialization. PLANT MOLECULAR BIOLOGY 2017; 93:431-449. [PMID: 27981388 DOI: 10.1007/s11103-016-0571-7] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2016] [Accepted: 12/02/2016] [Indexed: 05/13/2023]
Abstract
Functional specialization of cells is among the most fundamental processes of higher organism ontogenesis. The major obstacle to studying this phenomenon in plants is the difficulty of isolating certain types of cells at defined stages of in planta development for in-depth analysis. A rare opportunity is given by the developed model system of flax (Linum usitatissimum L.) phloem fibres that can be purified from the surrounding tissues at the stage of the tertiary cell wall deposition. The performed comparison of the whole transcriptome profile in isolated fibres and other portions of the flax stem, together with fibre metabolism characterization, helped to elucidate the general picture of the advanced stage of plant cell specialization and to reveal novel participants potentially involved in fibre metabolism regulation and cell wall formation. Down-regulation of all genes encoding proteins involved in xylan and lignin synthesis and up-regulation of genes for the specific set of transcription factors transcribed during tertiary cell wall formation were revealed. The increased abundance of transcripts for several glycosyltransferases indicated the enzymes that may be involved in synthesis of fibre-specific version of rhamnogalacturonan I.
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Affiliation(s)
- Oleg Gorshkov
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Science, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Natalia Mokshina
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Science, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Vladimir Gorshkov
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Science, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Svetlana Chemikosova
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Science, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Yuri Gogolev
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Science, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Science, Lobachevsky str., 2/31, Kazan, 420111, Russia.
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Ibragimova NN, Ageeva MV, Gorshkova TA. Development of gravitropic response: unusual behavior of flax phloem G-fibers. PROTOPLASMA 2017; 254:749-762. [PMID: 27263083 DOI: 10.1007/s00709-016-0985-8] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2015] [Accepted: 05/13/2016] [Indexed: 05/25/2023]
Abstract
The major mechanism of gravitropism that is discussed for herbal plants is based on the nonuniform elongation of cells located on the opposite stem sides, occurring in the growing zone of an organ. However, gravitropic response of flax (Linum usitatissimum L.) is well-pronounced in the lower half of developing stem, which has ceased elongation long in advance of plant inclination. We have analyzed the stem curvature region by various approaches of microscopy and found the undescribed earlier significant modifications in primary phloem fibers that have constitutively developed G-layer. In fibers on the pulling stem side, cell portions were widened with formation of "bottlenecks" between them, leading to the "sausage-like" shape of a cell. Lumen diameter in fiber widening increased, while cell wall thickness decreased. Callose was deposited in proximity to bottlenecks and sometimes totally occluded their lumen. Structure of fiber cell wall changed considerably, with formation of breaks between G- and S-layers. Thick fibrillar structures that were revealed in fiber cell wall by light microscopy got oblique orientation instead of parallel to the fiber axis one in control plants. The described changes occurred at various combinations of gravitational and mechanical stimuli. Thus, phloem fibers with constitutively formed gelatinous cell wall, located in nonelongating parts of herbal plant, are involved in gravitropism and may become an important element in general understanding of the gravity effects on plants. We suggest flax phloem fibers as the model system to study the mechanism of plant position correction, including signal perception and transduction.
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Affiliation(s)
- Nadezda N Ibragimova
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Center, Russian Academy of Sciences, Lobachevsky Str. 2/31, Kazan, 420111, Russia.
| | - Marina V Ageeva
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Center, Russian Academy of Sciences, Lobachevsky Str. 2/31, Kazan, 420111, Russia
| | - Tatyana A Gorshkova
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Center, Russian Academy of Sciences, Lobachevsky Str. 2/31, Kazan, 420111, Russia
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27
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Stiff MR, Haigler CH. Cotton fiber tips have diverse morphologies and show evidence of apical cell wall synthesis. Sci Rep 2016; 6:27883. [PMID: 27301434 PMCID: PMC4908599 DOI: 10.1038/srep27883] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2016] [Accepted: 05/24/2016] [Indexed: 12/31/2022] Open
Abstract
Cotton fibers arise through highly anisotropic expansion of a single seed epidermal cell. We obtained evidence that apical cell wall synthesis occurs through examining the tips of young elongating Gossypium hirsutum (Gh) and G. barbadense (Gb) fibers. We characterized two tip types in Gh fiber (hemisphere and tapered), each with distinct apical diameter, central vacuole location, and distribution of cell wall components. The apex of Gh hemisphere tips was enriched in homogalacturonan epitopes, including a relatively high methyl-esterified form associated with cell wall pliability. Other wall components increased behind the apex including cellulose and the α-Fuc-(1,2)-β-Gal epitope predominantly found in xyloglucan. Gb fibers had only one narrow tip type featuring characters found in each Gh tip type. Pulse-labeling of cell wall glucans indicated wall synthesis at the apex of both Gh tip types and in distal zones. Living Gh hemisphere and Gb tips ruptured preferentially at the apex upon treatment with wall degrading enzymes, consistent with newly synthesized wall at the apex. Gh tapered tips ruptured either at the apex or distantly. Overall, the results reveal diverse cotton fiber tip morphologies and support primary wall synthesis occurring at the apex and discrete distal regions of the tip.
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Affiliation(s)
- Michael R Stiff
- Department of Crop Science, North Carolina State University, Raleigh, North Carolina 27695 USA
| | - Candace H Haigler
- Department of Crop Science, North Carolina State University, Raleigh, North Carolina 27695 USA.,Department of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695 USA
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Snegireva A, Chernova T, Ageeva M, Lev-Yadun S, Gorshkova T. Intrusive growth of primary and secondary phloem fibres in hemp stem determines fibre-bundle formation and structure. AOB PLANTS 2015; 7:plv061. [PMID: 26019229 PMCID: PMC4512043 DOI: 10.1093/aobpla/plv061] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2014] [Accepted: 05/16/2015] [Indexed: 05/26/2023]
Abstract
Plant fibres-cells with important mechanical functions and a widely used raw material-are usually identified in microscopic sections only after reaching a significant length or after developing a thickened cell wall. We characterized the early developmental stages of hemp (Cannabis sativa) stem phloem fibres, both primary (originating from the procambium) and secondary (originating in the cambium), when they still had only a primary cell wall. We gave a major emphasis to the role of intrusive elongation, the specific type of plant cell growth by which fibres commonly attain large cell length. We could identify primary phloem fibres at a distance of only 1.2-1.5 mm from the shoot apical meristem when they grew symplastically with the surrounding tissues. Half a millimeter further downwards along the stem, fibres began their intrusive elongation, which led to a sharp increase in fibre numbers visible within the stem cross-sections. The intrusive elongation of primary phloem fibres was completed within the several distal centimetres of the growing stem, before the onset of their secondary cell wall formation. The formation of secondary phloem fibres started long after the beginning of secondary xylem formation. Our data indicate that only a small portion of the fusiform cambial initials (<10 %) give rise directly or via their derivatives to secondary phloem fibres. The key determinant of final bundle structure, both for primary and secondary phloem fibres, is intrusive growth. Through bi-directional elongation, fibres join other fibres initiated individually in other stem levels, thus forming the bundles. Our results provide the specific developmental basis for further biochemical and molecular-genetic studies of phloem fibre development in hemp, but may be applied to many other species.
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Affiliation(s)
- Anastasia Snegireva
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Sciences, Kazan 420111, Russia
| | - Tatyana Chernova
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Sciences, Kazan 420111, Russia
| | - Marina Ageeva
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Sciences, Kazan 420111, Russia
| | - Simcha Lev-Yadun
- Department of Biology and Environment, Faculty of Natural Sciences, University of Haifa - Oranim, Tivon 36006, Israel
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Centre, Russian Academy of Sciences, Kazan 420111, Russia
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Pinzon-Latorre D, Deyholos MK. Pectinmethylesterases (PME) and pectinmethylesterase inhibitors (PMEI) enriched during phloem fiber development in flax (Linum usitatissimum). PLoS One 2014; 9:e105386. [PMID: 25121600 PMCID: PMC4133374 DOI: 10.1371/journal.pone.0105386] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2014] [Accepted: 07/23/2014] [Indexed: 01/18/2023] Open
Abstract
Flax phloem fibers achieve their length by intrusive-diffusive growth, which requires them to penetrate the extracellular matrix of adjacent cells. Fiber elongation therefore involves extensive remodelling of cell walls and middle lamellae, including modifying the degree and pattern of methylesterification of galacturonic acid (GalA) residues of pectin. Pectin methylesterases (PME) are important enzymes for fiber elongation as they mediate the demethylesterification of GalA in muro, in either a block-wise fashion or in a random fashion. Our objective was to identify PMEs and PMEIs that mediate phloem fiber elongation in flax. For this purpose, we measured transcript abundance of candidate genes at nine different stages of stem and fiber development and found sets of genes enriched during fiber elongation and maturation as well as during xylem development. We expressed one of the flax PMEIs in E. coli and demonstrated that it was able to inhibit most of the native PME activity in the upper portion of the flax stem. These results identify key genetic components of the intrusive growth process and define targets for fiber engineering and crop improvement.
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Affiliation(s)
- David Pinzon-Latorre
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada
- * E-mail:
| | - Michael K. Deyholos
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada
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Mokshina N, Gorshkova T, Deyholos MK. Chitinase-like (CTL) and cellulose synthase (CESA) gene expression in gelatinous-type cellulosic walls of flax (Linum usitatissimum L.) bast fibers. PLoS One 2014; 9:e97949. [PMID: 24918577 PMCID: PMC4053336 DOI: 10.1371/journal.pone.0097949] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2014] [Accepted: 04/26/2014] [Indexed: 11/19/2022] Open
Abstract
Plant chitinases (EC 3.2.1.14) and chitinase-like (CTL) proteins have diverse functions including cell wall biosynthesis and disease resistance. We analyzed the expression of 34 chitinase and chitinase-like genes of flax (collectively referred to as LusCTLs), belonging to glycoside hydrolase family 19 (GH19). Analysis of the transcript expression patterns of LusCTLs in the stem and other tissues identified three transcripts (LusCTL19, LusCTL20, LusCTL21) that were highly enriched in developing bast fibers, which form cellulose-rich gelatinous-type cell walls. The same three genes had low relative expression in tissues with primary cell walls and in xylem, which forms a xylan type of secondary cell wall. Phylogenetic analysis of the LusCTLs identified a flax-specific sub-group that was not represented in any of other genomes queried. To provide further context for the gene expression analysis, we also conducted phylogenetic and expression analysis of the cellulose synthase (CESA) family genes of flax, and found that expression of secondary wall-type LusCESAs (LusCESA4, LusCESA7 and LusCESA8) was correlated with the expression of two LusCTLs (LusCTL1, LusCTL2) that were the most highly enriched in xylem. The expression of LusCTL19, LusCTL20, and LusCTL21 was not correlated with that of any CESA subgroup. These results defined a distinct type of CTLs that may have novel functions specific to the development of the gelatinous (G-type) cellulosic walls.
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Affiliation(s)
- Natalia Mokshina
- Kazan Institute of Biochemistry and Biophysics, Russian Academy of Sciences, Kazan, Russia
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics, Russian Academy of Sciences, Kazan, Russia
| | - Michael K. Deyholos
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada
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31
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Horbens M, Gao J, Neinhuis C. Cell differentiation and tissue formation in the unique fruits of devil's claws (Martyniaceae). AMERICAN JOURNAL OF BOTANY 2014; 101:914-924. [PMID: 24907252 DOI: 10.3732/ajb.1400006] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
• Premise of the study: Martyniaceae are characterized by capsules with two upwardly curved, horn-shaped extensions representing morphologically specialized epizoochorous fruits. Because the capsules are assumed to cling to hooves and ankles of large mammals, fiber arrangement and tissue combinations within the endocarp ensuring proper attachment to the vector's feet during transport are of particular interest. In this first detailed anatomical investigation, the functional adaptation of the fruits and their implications for the specific dispersal mode are provided. The peculiar fiber arrangement may also be of interest for future biomimetic composite materials.• Methods: Endocarp anatomy and details of tissue differentiation were examined in fruits of Ibicella lutea and Proboscidea louisianica subsp. fragrans combining light microscopy, SEM, and x-ray microtomography analysis.• Key results: While tips of the extensions are predominantly reinforced by longitudinally oriented fibers, in the middle segment these fibers are densely packed in individual bundles entwined and separated by transversely elongated cells. Within the capsule wall, the fiber bundles are embedded in a dense mesh of transversely oriented fibers that circularly reinforce and protect the loculus. This fibrous pericarp tissue develops within few days by localized cell divisions and intrusive growth of primarily isodiametric parenchyma cells in the pistil.• Conclusions: The study allows insight into a unique and complex example of functionally driven cell growth and tissue formation. Long-horned fruits of Martyniaceae obviously are highly specialized to epizoochorous dispersal, pointing to primary vector-related seed dispersal. The highly ordered arrangement of fibers results in a great mechanical firmness.
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Affiliation(s)
- Melanie Horbens
- Institut für Botanik, Technische Universität Dresden, D-01062 Dresden, Germany
| | - Jie Gao
- Institut für Botanik, Technische Universität Dresden, D-01062 Dresden, Germany
| | - Christoph Neinhuis
- Institut für Botanik, Technische Universität Dresden, D-01062 Dresden, Germany
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No stress! Relax! Mechanisms governing growth and shape in plant cells. Int J Mol Sci 2014; 15:5094-114. [PMID: 24663059 PMCID: PMC3975442 DOI: 10.3390/ijms15035094] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2013] [Revised: 03/03/2014] [Accepted: 03/04/2014] [Indexed: 12/15/2022] Open
Abstract
The mechanisms through which plant cells control growth and shape are the result of the coordinated action of many events, notably cell wall stress relaxation and turgor-driven expansion. The scalar nature of turgor pressure would drive plant cells to assume spherical shapes; however, this is not the case, as plant cells show an amazing variety of morphologies. Plant cell walls are dynamic structures that can display alterations in matrix polysaccharide composition and concentration, which ultimately affect the wall deformation rate. The wide varieties of plant cell shapes, spanning from elongated cylinders (as pollen tubes) and jigsaw puzzle-like epidermal cells, to very long fibres and branched stellate leaf trichomes, can be understood if the underlying mechanisms regulating wall biosynthesis and cytoskeletal dynamics are addressed. This review aims at gathering the available knowledge on the fundamental mechanisms regulating expansion, growth and shape in plant cells by putting a special emphasis on the cell wall-cytoskeleton system continuum. In particular, we discuss from a molecular point of view the growth mechanisms characterizing cell types with strikingly different geometries and describe their relationship with primary walls. The purpose, here, is to provide the reader with a comprehensive overview of the multitude of events through which plant cells manage to expand and control their final shapes.
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Sanati Nezhad A, Geitmann A. The cellular mechanics of an invasive lifestyle. JOURNAL OF EXPERIMENTAL BOTANY 2013; 64:4709-28. [PMID: 24014865 DOI: 10.1093/jxb/ert254] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Invasive behaviour is the hallmark of a variety of cell types of animal, plant, and fungal origin. Here we review the purpose and mechanism of invasive growth and migration. The focus is on the physical principles governing the process, the source of invasive force, and the cellular mechanism by which the cell penetrates the substrate. The current experimental methods for measuring invasive force and the modelling approaches for studying invasive behaviour are explained, and future experimental strategies are proposed.
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Affiliation(s)
- Amir Sanati Nezhad
- McGill University and Génome Québec Innovation Centre, Biomedical Engineering Department, McGill University, Montreal, Canada
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34
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Pinzón-Latorre D, Deyholos MK. Characterization and transcript profiling of the pectin methylesterase (PME) and pectin methylesterase inhibitor (PMEI) gene families in flax (Linum usitatissimum). BMC Genomics 2013; 14:742. [PMID: 24168262 PMCID: PMC4008260 DOI: 10.1186/1471-2164-14-742] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2013] [Accepted: 10/26/2013] [Indexed: 11/24/2022] Open
Abstract
Background Pectin methylesterases (PMEs) catalyze the demethylesterification of homogalacturonans in the cell wall; their activity is regulated in part by pectin methylesterase inhibitors (PMEIs). PME activity may result in either rigidification or loosening of the cell wall, depending on the mode of demethylesterification. The activity of PMEs in the middle lamella is expected to affect intrusive elongation of phloem fibers, and their adhesion to adjacent cells. Length and extractability of phloem fibers are qualities important for their industrial uses in textiles and composites. As only three flax PMEs had been previously described, we were motivated to characterize the PME and PMEI gene families of flax. Results We identified 105 putative flax PMEs (LuPMEs) and 95 putative PMEIs (LuPMEIs) within the whole-genome assembly. We found experimental evidence for the transcription of 77/105 LuPMEs and 83/95 LuPMEIs, and surveyed the transcript abundance of these in 12 different tissues and stages of development. Six major monophyletic groups of LuPMEs could be defined based on the inferred relationships of flax genes and their presumed orthologs from other species. We searched the LuPMEs and LuPMEIs for conserved residues previously reported to be important for their tertiary structure and function. In the LuPMEs, the most highly conserved residues were catalytic residues while in the LuPMEIs, cysteines forming disulfude bridges between helices α2 and α3 were most highly conserved. In general, the conservation of critical residues was higher in the genes with evidence of transcript expression than in those for which no expression was detected. Conclusions The LuPMEs and LuPMEIs comprise large families with complex patterns of transcript expression and a wide range of physical characteristics. We observed that multiple PMEs and PMEIs are expressed in partially overlapping domains, indicative of several genes acting redundantly during most processes. The potential for functional redundancy was highlighted also by the phylogenetic analyses. We were able to identify a subset of PME and PMEIs that appeared particularly relevant to fiber development, which may provide a basis for the improvement of key traits in industrial feedstocks and a better understanding of the physiological roles of PMEs and PMEIs in general.
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Affiliation(s)
| | - Michael K Deyholos
- Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
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35
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Gea G, Kjell S, Jean-François H. Integrated -omics: a powerful approach to understanding the heterogeneous lignification of fibre crops. Int J Mol Sci 2013; 14:10958-78. [PMID: 23708098 PMCID: PMC3709712 DOI: 10.3390/ijms140610958] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2013] [Revised: 05/15/2013] [Accepted: 05/17/2013] [Indexed: 12/15/2022] Open
Abstract
Lignin and cellulose represent the two main components of plant secondary walls and the most abundant polymers on Earth. Quantitatively one of the principal products of the phenylpropanoid pathway, lignin confers high mechanical strength and hydrophobicity to plant walls, thus enabling erect growth and high-pressure water transport in the vessels. Lignin is characterized by a high natural heterogeneity in its composition and abundance in plant secondary cell walls, even in the different tissues of the same plant. A typical example is the stem of fibre crops, which shows a lignified core enveloped by a cellulosic, lignin-poor cortex. Despite the great value of fibre crops for humanity, however, still little is known on the mechanisms controlling their cell wall biogenesis, and particularly, what regulates their spatially-defined lignification pattern. Given the chemical complexity and the heterogeneous composition of fibre crops' secondary walls, only the use of multidisciplinary approaches can convey an integrated picture and provide exhaustive information covering different levels of biological complexity. The present review highlights the importance of combining high throughput -omics approaches to get a complete understanding of the factors regulating the lignification heterogeneity typical of fibre crops.
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Affiliation(s)
- Guerriero Gea
- Department Environment and Agro-biotechnologies (EVA), Centre de Recherche Public-Gabriel Lippmann, 41, Rue du Brill, L-4422 Belvaux, Luxembourg; E-Mails: (G.G.); (S.K.)
| | - Sergeant Kjell
- Department Environment and Agro-biotechnologies (EVA), Centre de Recherche Public-Gabriel Lippmann, 41, Rue du Brill, L-4422 Belvaux, Luxembourg; E-Mails: (G.G.); (S.K.)
| | - Hausman Jean-François
- Department Environment and Agro-biotechnologies (EVA), Centre de Recherche Public-Gabriel Lippmann, 41, Rue du Brill, L-4422 Belvaux, Luxembourg; E-Mails: (G.G.); (S.K.)
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36
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Kliebenstein DJ. Making new molecules--evolution of structures for novel metabolites in plants. CURRENT OPINION IN PLANT BIOLOGY 2013; 16:112-7. [PMID: 23295108 DOI: 10.1016/j.pbi.2012.12.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2012] [Revised: 12/05/2012] [Accepted: 12/12/2012] [Indexed: 05/05/2023]
Abstract
Secondary metabolites are essential plant fitness within the natural environment by providing defense against attacking and competing organisms including bacteria, fungi, insects, animals and other plants. These compounds' defensive function is frequently intertwined with specific accumulation in novel developmental structures. While, the biochemical community is making great strides in identifying the genetic and biochemical mechanisms that allow these chemicals to be synthesized there is vastly less progress on understanding the developmental mechanisms that is equally key to their defensive function. In this review, I briefly delve into several novel developmental structures and provide evolutionary hypothesis for how they may have evolved and how they could be unique systems for studying key developmental processes that have heretofore been recalcitrant to study.
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Douchiche O, Driouich A, Morvan C. Impact of cadmium on early stages of flax fibre differentiation: ultrastructural aspects and pectic features of cell walls. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2011; 49:592-599. [PMID: 21470867 DOI: 10.1016/j.plaphy.2011.03.008] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2011] [Accepted: 03/10/2011] [Indexed: 05/30/2023]
Abstract
The effect of 0.5mM cadmium (Cd) was studied on the ultrastructural aspects and pectin features of the walls of flax cellulosic fibres when the thickening of secondary wall had just started in the hypocotyl of 10-day old seedlings. As seen by PATAg staining in controls, cell-wall formation displayed two distinct steps, secretion and remodelling, which did not occur simultaneously for all the neighbouring fibres. The inner part of the secondary wall, where the cellulose molecules had just been synthesized, appeared very reactive to PATAg. The outer part, where the cellulose fibrils associated in larger microfibril complexes, became non-reactive to PATAg. Under Cd treatment, we noticed some acceleration of fibre differentiation in terms of fibre number, wall thickness and yield. As revealed by PATAg staining, treated fibres exhibited a disturbed cell-wall texture, indicating a modified adhesion between the matrix polysaccharides and the cellulose microfibrils. The Cd impact on the distribution of highly methylesterified homogalacturonans (recognized by JIM7 antibody) was moderate in the cell junctions and low in the primary wall and outer part of secondary wall. The data meant that no early deesterification occurred in these domains, a behaviour related to the specificity of the CW-II metabolism. No large redistribution of low esterified homogalacturonans (recognized by JIM5 antibody) happened either. In parallel, the amount of uronic acid significantly increased in the so-called H(2)SO(4) cell-wall extract, indicating a Cd impact on pectin structure not detected by JIM5 or JIM7 antibodies.
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Affiliation(s)
- Olfa Douchiche
- Laboratory Glyco-MEV EA 4358, IFRMP 23, University of Rouen, 76821 Mont Saint Aignan Cedex, France.
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Merks RM, Guravage M, Inzé D, Beemster GT. VirtualLeaf: an open-source framework for cell-based modeling of plant tissue growth and development. PLANT PHYSIOLOGY 2011; 155:656-66. [PMID: 21148415 PMCID: PMC3032457 DOI: 10.1104/pp.110.167619] [Citation(s) in RCA: 78] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Plant organs, including leaves and roots, develop by means of a multilevel cross talk between gene regulation, patterned cell division and cell expansion, and tissue mechanics. The multilevel regulatory mechanisms complicate classic molecular genetics or functional genomics approaches to biological development, because these methodologies implicitly assume a direct relation between genes and traits at the level of the whole plant or organ. Instead, understanding gene function requires insight into the roles of gene products in regulatory networks, the conditions of gene expression, etc. This interplay is impossible to understand intuitively. Mathematical and computer modeling allows researchers to design new hypotheses and produce experimentally testable insights. However, the required mathematics and programming experience makes modeling poorly accessible to experimental biologists. Problem-solving environments provide biologically intuitive in silico objects ("cells", "regulation networks") required for setting up a simulation and present those to the user in terms of familiar, biological terminology. Here, we introduce the cell-based computer modeling framework VirtualLeaf for plant tissue morphogenesis. The current version defines a set of biologically intuitive C++ objects, including cells, cell walls, and diffusing and reacting chemicals, that provide useful abstractions for building biological simulations of developmental processes. We present a step-by-step introduction to building models with VirtualLeaf, providing basic example models of leaf venation and meristem development. VirtualLeaf-based models provide a means for plant researchers to analyze the function of developmental genes in the context of the biophysics of growth and patterning. VirtualLeaf is an ongoing open-source software project (http://virtualleaf.googlecode.com) that runs on Windows, Mac, and Linux.
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Affiliation(s)
- Roeland M.H. Merks
- Centrum Wiskunde & Informatica, 1098 XG Amsterdam, The Netherlands (R.M.H.M., M.G.); Netherlands Consortium for Systems Biology/Netherlands Institute for Systems Biology, 1098 XG Amsterdam, The Netherlands (R.M.H.M., M.G.); VIB, Department of Plant Systems Biology (R.M.H.M., D.I., G.T.S.B.), and Department of Plant Biotechnology and Genetics (R.M.H.M., D.I., G.T.S.B.), Ghent University, 9052 Ghent, Belgium; Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (G.T.S.B.)
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Roach MJ, Deyholos MK. Microarray analysis of developing flax hypocotyls identifies novel transcripts correlated with specific stages of phloem fibre differentiation. ANNALS OF BOTANY 2008; 102:317-30. [PMID: 18593690 PMCID: PMC2701801 DOI: 10.1093/aob/mcn110] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2007] [Revised: 04/23/2008] [Accepted: 06/06/2008] [Indexed: 05/21/2023]
Abstract
BACKGROUND AND AIMS Hypocotyls are a commonly used model to study primary growth in plants, since post-germinative hypocotyls increase in size by cell elongation rather than cell division. Flax hypocotyls produce phloem fibres in bundles one to two cell layers thick, parallel to the protoxylem poles of the stele. Cell wall deposition within these cells occurs rapidly at a well-defined stage of development. The aim was to identify transcripts associated with distinct stages of hypocotyl and phloem fibre development. METHODS Stages of flax hypocotyl development were defined by analysing hypocotyl length in relation to fibre secondary wall deposition. Selected stages of development were used in microarray analyses to identify transcripts involved in the transition from elongation to secondary cell wall deposition in fibres. Expression of specific genes was confirmed by qRT-PCR and by enzymatic assays. KEY RESULTS Genes enriched in the elongation phase included transcripts related to cell-wall modification or primary-wall deposition. Transcripts specifically enriched at the transition between elongation and secondary wall deposition included beta-galactosidase and arabinogalactan proteins. Later stages of wall development showed an increase in secondary metabolism-related transcripts, chitinases and glycosyl hydrolases including KORRIGAN. Microarray analysis also identified groups of transcription factors enriched at one or more stages of fibre development. Subsequent analysis of a differentially expressed beta-galactosidase confirmed that the post-elongation increase in beta-galactosidase enzyme activity was localized to phloem fibres. CONCLUSIONS Transcripts were identified associated with specific stages of hypocotyl development, in which phloem fibre cells were undergoing thickening of secondary walls. Temporal and spatial regulation of beta-galactosidase activity suggests a role for this enzyme in remodelling of flax bast fibre cell walls during secondary cell wall deposition.
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Affiliation(s)
| | - Michael K. Deyholos
- Department of Biological Sciences, University of Alberta, Edmonton, CanadaT6G 2E9
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Roach MJ, Deyholos MK. Microarray analysis of flax (Linum usitatissimum L.) stems identifies transcripts enriched in fibre-bearing phloem tissues. Mol Genet Genomics 2007; 278:149-65. [PMID: 17503083 DOI: 10.1007/s00438-007-0241-1] [Citation(s) in RCA: 72] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2007] [Accepted: 04/19/2007] [Indexed: 11/29/2022]
Abstract
To better understand the molecular processes associated with the development of the unusually long (> 30 mm) and strong bast fibre cells within the phloem of flax stems, we conducted a gene discovery experiment to identify transcripts enriched in fibre-bearing tissues, with the intention that these transcripts would serve as future targets for crop improvement and research in phloem development and cell wall deposition. We produced a library of 9,600 cDNA clones from the peels of flax stems, and selected tissue-specific cDNAs for sequencing based on two series of microarray experiments. In the first microarray series, we compared transcript abundance in stem-peels and leaves, and identified stem-enriched transcripts putatively involved in the processes of polysaccharide and cell wall metabolism. In the second microarray series, we compared gene expression in three segments of the vertical stem axis, which constituted a developmental series for phloem fibres and other cell types. The expression of specific LTP and AGP transcripts was particularly well-correlated with stem segments during either the elongation phase or cell-wall thickening phase of phloem fibre development, and the phloem-specific enrichment of these transcripts was confirmed by qRT-PCR. Transcripts representing multiple, distinct chitinases, beta-galactosidases, arabinogalactan proteins (AGP), and lipid transfer proteins (LTPs) were among the interesting transcripts enriched in specific stages of the developing stem. Considered together, the results of our analyses suggest similarity between the molecular mechanisms underlying phloem fibre development and the gelatinous fibres of tension wood in trees.
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Affiliation(s)
- Melissa J Roach
- Department of Biological Sciences, University of Alberta, Edmonton, Canada
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Gorshkova T, Morvan C. Secondary cell-wall assembly in flax phloem fibres: role of galactans. PLANTA 2006; 223:149-58. [PMID: 16362330 DOI: 10.1007/s00425-005-0118-7] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2005] [Accepted: 08/08/2005] [Indexed: 05/05/2023]
Abstract
Non-lignified fibre cells (named gelatinous fibres) are present in tension wood and the stems of fibre crops (such as flax and hemp). These cells develop a very thick S2 layer within the secondary cell wall, which is characterised by (1) cellulose microfibrils largely parallel to the longitudinal axis of the cell, and (2) a high proportion of galactose-containing polymers among the non-cellulosic polysaccharides. In this review, we focus on the role of these polymers in the assembly of gelatinous fibres of flax. At the different stages of fibre development, we analyse in detail data based on sugar composition, linkages of pectic polymers, and immunolocalisation of the beta-(1-->4)-galactans. These data indicate that high molecular-mass gelatinous galactans accumulate in specialised Golgi-derived vesicles during fibre cell-wall thickening. They consist of RG-I-like polymers with side chains of beta-(1-->4)-linked galactose. Most of them are short, but there are also long chains containing up to 28 galactosyl residues. At fibre maturity, two types of cross-linked galactans are identified, a C-L structure that resembles the part of soluble galactan with long side chains and a C-S structure with short chains. Different possibilities for soluble galactan to give rise to C-L and C-S are analysed. In addition, we discuss the prospect for the soluble galactan in preventing the newly formed cellulose chains from completing immediate crystallisation. This leads to a hypothesis that firstly the secretion of soluble galactans plays a role in the axial orientation of cellulose microfibrils, and secondly the remodelling and cross-linking of pectic galactans are linked to the dehydration and the assembly of S2 layer.
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Affiliation(s)
- Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics, KSC RAS, p/o box 30, Kazan, Tatarstan 420111, Russia
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