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Tiepo AN, Coutinho ID, de Oliveira Machado G, Calzavara AK, Hertel MF, Pimenta JA, de Oliveira ALM, Colnago LA, Henning LMM, Oliveira HC, Stolf-Moreira R. Influence of plant growth-promoting bacteria on leaf carbon and nitrogen metabolism of two drought-stressed neotropical tree species: a metabolomic approach. PLANTA 2024; 260:31. [PMID: 38888604 DOI: 10.1007/s00425-024-04460-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Accepted: 06/07/2024] [Indexed: 06/20/2024]
Abstract
Deforestation of Atlantic Forest has caused prolonged drought events in the last decades. The need for reforestation is growing, and the development of native seedlings that are more tolerant to drought stress is necessary. A biotechnological tool that improves plant tolerance is the use of plant growth-promoting bacteria (PGPB) as inoculants. Two species of PGPB were inoculated in drought-stressed seedlings of two neotropical tree species that have been used in environmental restoration programs: Cecropia pachystachya and Cariniana estrellensis. Biometrical, physiological, and metabolomic parameters from carbon and nitrogen pathways were evaluated. We found that the PGPB positively influenced photosynthesis and growth parameters in both trees under drought. The enzymes activities, the tricarboxylic acid cycle intermediates, the amino acids, and protein contents were also influenced by the PGPB treatments. The results allowed us to find the specific composition of secondary metabolites of each plant species. This study provides evidence that there is not a single mechanism involved in drought tolerance and that the inoculation with PGPB promotes a broad-spectrum tolerance response in Neotropical trees. The inoculation with PGPB appears as an important strategy to improve drought tolerance in Atlantic Forest native trees and enhance environmental restoration programs' success. MAIN CONCLUSION: The association with plant growth-promoting bacteria improved the tolerance to drought in Neotropical trees through biochemical, physiological, and biometrical parameters. This can enhance the success of forest restoration programs.
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Affiliation(s)
- Angelica Nunes Tiepo
- Department of Animal and Plant Biology, Center of Biological Sciences, State University of Londrina-UEL, Rodovia Celso Garcia Cid-PR445, Km 380, Campus Universitário, Londrina, PR, 86057-970, Brazil.
| | - Isabel Duarte Coutinho
- Embrapa Instrumentação, Rua XV de Novembro, São Carlos, São Paulo, 1452, 13560-970, Brazil
| | | | - Anderson Kikuchi Calzavara
- Department of Animal and Plant Biology, Center of Biological Sciences, State University of Londrina-UEL, Rodovia Celso Garcia Cid-PR445, Km 380, Campus Universitário, Londrina, PR, 86057-970, Brazil
| | - Mariana Fernandes Hertel
- Department of Animal and Plant Biology, Center of Biological Sciences, State University of Londrina-UEL, Rodovia Celso Garcia Cid-PR445, Km 380, Campus Universitário, Londrina, PR, 86057-970, Brazil
| | - José Antonio Pimenta
- Department of Animal and Plant Biology, Center of Biological Sciences, State University of Londrina-UEL, Rodovia Celso Garcia Cid-PR445, Km 380, Campus Universitário, Londrina, PR, 86057-970, Brazil
| | | | - Luiz Alberto Colnago
- Embrapa Instrumentação, Rua XV de Novembro, São Carlos, São Paulo, 1452, 13560-970, Brazil
| | | | - Halley Caixeta Oliveira
- Department of Animal and Plant Biology, Center of Biological Sciences, State University of Londrina-UEL, Rodovia Celso Garcia Cid-PR445, Km 380, Campus Universitário, Londrina, PR, 86057-970, Brazil
| | - Renata Stolf-Moreira
- Department of Animal and Plant Biology, Center of Biological Sciences, State University of Londrina-UEL, Rodovia Celso Garcia Cid-PR445, Km 380, Campus Universitário, Londrina, PR, 86057-970, Brazil.
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Zhang J, Zhang H, Luo S, Ye L, Wang C, Wang X, Tian C, Sun Y. Analysis and Functional Prediction of Core Bacteria in the Arabidopsis Rhizosphere Microbiome under Drought Stress. Microorganisms 2024; 12:790. [PMID: 38674734 PMCID: PMC11052302 DOI: 10.3390/microorganisms12040790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Revised: 04/01/2024] [Accepted: 04/10/2024] [Indexed: 04/28/2024] Open
Abstract
The effects of global warming, population growth, and economic development are increasing the frequency of extreme weather events, such as drought. Among abiotic stresses, drought has the greatest impact on soil biological activity and crop yields. The rhizosphere microbiota, which represents a second gene pool for plants, may help alleviate the effects of drought on crops. In order to investigate the structure and diversity of the bacterial communities on drought stress, this study analyzed the differences in the bacterial communities by high-throughput sequencing and bioinformatical analyses in the rhizosphere of Arabidopsis thaliana under normal and drought conditions. Based on analysis of α and β diversity, the results showed that drought stress had no significant effect on species diversity between groups, but affected species composition. Difference analysis of the treatments showed that the bacteria with positive responses to drought stress were Burkholderia-Caballeronia-Paraburkholderia (BCP) and Streptomyces. Drought stress reduced the complexity of the rhizosphere bacterial co-occurrence network. Streptomyces was at the core of the network in both the control and drought treatments, whereas the enrichment of BCP under drought conditions was likely due to a decrease in competitors. Functional prediction showed that the core bacteria metabolized a wide range of carbohydrates, such as pentose, glycans, and aromatic compounds. Our results provide a scientific and theoretical basis for the use of rhizosphere microbial communities to alleviate plant drought stress and the further exploration of rhizosphere microbial interactions under drought stress.
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Affiliation(s)
- Jianfeng Zhang
- Key Laboratory of Straw Comprehensive Utilization and Black Soil, Conservation College of Life Science, The Ministry of Education, Jilin Agricultural University, Changchun 130118, China; (J.Z.); (H.Z.); (L.Y.); (X.W.)
| | - Hengfei Zhang
- Key Laboratory of Straw Comprehensive Utilization and Black Soil, Conservation College of Life Science, The Ministry of Education, Jilin Agricultural University, Changchun 130118, China; (J.Z.); (H.Z.); (L.Y.); (X.W.)
| | - Shouyang Luo
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China; (S.L.); (C.W.); (C.T.)
| | - Libo Ye
- Key Laboratory of Straw Comprehensive Utilization and Black Soil, Conservation College of Life Science, The Ministry of Education, Jilin Agricultural University, Changchun 130118, China; (J.Z.); (H.Z.); (L.Y.); (X.W.)
| | - Changji Wang
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China; (S.L.); (C.W.); (C.T.)
| | - Xiaonan Wang
- Key Laboratory of Straw Comprehensive Utilization and Black Soil, Conservation College of Life Science, The Ministry of Education, Jilin Agricultural University, Changchun 130118, China; (J.Z.); (H.Z.); (L.Y.); (X.W.)
| | - Chunjie Tian
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China; (S.L.); (C.W.); (C.T.)
| | - Yu Sun
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China; (S.L.); (C.W.); (C.T.)
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Sadvakasova AK, Bauenova MO, Kossalbayev BD, Zayadan BK, Huang Z, Wang J, Balouch H, Alharby HF, Chang JS, Allakhverdiev SI. Synthetic algocyanobacterial consortium as an alternative to chemical fertilizers. ENVIRONMENTAL RESEARCH 2023; 233:116418. [PMID: 37321341 DOI: 10.1016/j.envres.2023.116418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2023] [Revised: 05/28/2023] [Accepted: 06/12/2023] [Indexed: 06/17/2023]
Abstract
The use of unregulated pesticides and chemical fertilizers can have detrimental effects on biodiversity and human health. This problem is exacerbated by the growing demand for agricultural products. To address these global challenges and promote food and biological security, a new form of agriculture is needed that aligns with the principles of sustainable development and the circular economy. This entails developing the biotechnology market and maximizing the use of renewable and eco-friendly resources, including organic fertilizers and biofertilizers. Phototrophic microorganisms capable of oxygenic photosynthesis and assimilation of molecular nitrogen play a crucial role in soil microbiota, interacting with diverse microflora. This suggests the potential for creating artificial consortia based on them. Microbial consortia offer advantages over individual organisms as they can perform complex functions and adapt to variable conditions, making them a frontier in synthetic biology. Multifunctional consortia overcome the limitations of monocultures and produce biological products with a wide range of enzymatic activities. Biofertilizers based on such consortia present a viable alternative to chemical fertilizers, addressing the issues associated with their usage. The described capabilities of phototrophic and heterotrophic microbial consortia enable effective and environmentally safe restoration and preservation of soil properties, fertility of disturbed lands, and promotion of plant growth. Hence, the utilization of algo-cyano-bacterial consortia biomass can serve as a sustainable and practical substitute for chemical fertilizers, pesticides, and growth promoters. Furthermore, employing these bio-based organisms is a significant stride towards enhancing agricultural productivity, which is an essential requirement to meet the escalating food demands of the growing global population. Utilizing domestic and livestock wastewater, as well as CO2 flue gases, for cultivating this consortium not only helps reduce agricultural waste but also enables the creation of a novel bioproduct within a closed production cycle.
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Affiliation(s)
- Assemgul K Sadvakasova
- Faculty of Biology and Biotechnology, Al-Farabi Kazakh National University, Al-Farabi 71, Almaty, 050038, Kazakhstan
| | - Meruyert O Bauenova
- Faculty of Biology and Biotechnology, Al-Farabi Kazakh National University, Al-Farabi 71, Almaty, 050038, Kazakhstan
| | - Bekzhan D Kossalbayev
- Faculty of Biology and Biotechnology, Al-Farabi Kazakh National University, Al-Farabi 71, Almaty, 050038, Kazakhstan; Department of Chemical and Biochemical Engineering, Institute of Geology and Oil-Gas Business Institute Named After K. Turyssov, Satbayev University, Satpaev 22, Almaty, 050043, Kazakhstan
| | - Bolatkhan K Zayadan
- Faculty of Biology and Biotechnology, Al-Farabi Kazakh National University, Al-Farabi 71, Almaty, 050038, Kazakhstan
| | - Zhiyong Huang
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, No. 32, West 7th Road, Tianjin Airport Economic Area, 300308, Tianjin, China
| | - Jingjing Wang
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, No. 32, West 7th Road, Tianjin Airport Economic Area, 300308, Tianjin, China
| | - Huma Balouch
- Faculty of Biology and Biotechnology, Al-Farabi Kazakh National University, Al-Farabi 71, Almaty, 050038, Kazakhstan
| | - Hesham F Alharby
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, 21589, Saudi Arabia
| | - Jo-Shu Chang
- Department of Chemical and Materials Engineering, Tunghai University, Taichung, 407, Taiwan; Research Center for Smart Sustainable Circular Economy, Tunghai University, Taichung, 407, Taiwan; Department of Chemical Engineering, National Cheng Kung University, Tainan, 701, Taiwan; Department of Chemical Engineering and Materials Science, Yuan Ze University, Chung-Li, 32003, Taiwan.
| | - Suleyman I Allakhverdiev
- K.A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya Street 35, Moscow, 127276, Russia; Institute of Basic Biological Problems, FRC PSCBR RAS, Pushchino, 142290, Russia; Faculty of Engineering and Natural Sciences, Bahcesehir University, Istanbul, 34353, Turkey.
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Campos EVR, Pereira ADES, Aleksieienko I, do Carmo GC, Gohari G, Santaella C, Fraceto LF, Oliveira HC. Encapsulated plant growth regulators and associative microorganisms: Nature-based solutions to mitigate the effects of climate change on plants. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023; 331:111688. [PMID: 36963636 DOI: 10.1016/j.plantsci.2023.111688] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Revised: 03/16/2023] [Accepted: 03/19/2023] [Indexed: 06/18/2023]
Abstract
Over the past decades, the atmospheric CO2 concentration and global average temperature have been increasing, and this trend is projected to soon become more severe. This scenario of climate change intensifies abiotic stress factors (such as drought, flooding, salinity, and ultraviolet radiation) that threaten forest and associated ecosystems as well as crop production. These factors can negatively affect plant growth and development with a consequent reduction in plant biomass accumulation and yield, in addition to increasing plant susceptibility to biotic stresses. Recently, biostimulants have become a hotspot as an effective and sustainable alternative to alleviate the negative effects of stresses on plants. However, the majority of biostimulants have poor stability under environmental conditions, which leads to premature degradation, shortening their biological activity. To solve these bottlenecks, micro- and nano-based formulations containing biostimulant molecules and/or microorganisms are gaining attention, as they demonstrate several advantages over their conventional formulations. In this review, we focus on the encapsulation of plant growth regulators and plant associative microorganisms as a strategy to boost their application for plant protection against abiotic stresses. We also address the potential limitations and challenges faced for the implementation of this technology, as well as possibilities regarding future research.
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Affiliation(s)
- Estefânia V R Campos
- Institute of Science and Technology of Sorocaba, São Paulo State University (UNESP), Av. Três de Março 511, 18087-180 Sorocaba, São Paulo, Brazil; B.Nano Soluções Tecnológicas Ltda, Rua Dr. Júlio Prestes, 355,18230-000 São Miguel Arcanjo, São Paulo, Brazil.
| | - Anderson do E S Pereira
- Institute of Science and Technology of Sorocaba, São Paulo State University (UNESP), Av. Três de Março 511, 18087-180 Sorocaba, São Paulo, Brazil; B.Nano Soluções Tecnológicas Ltda, Rua Dr. Júlio Prestes, 355,18230-000 São Miguel Arcanjo, São Paulo, Brazil
| | - Ivan Aleksieienko
- Aix Marseille University, CEA, CNRS, BIAM, LEMiRE, Microbial Ecology of the Rhizosphere, ECCOREV FR 3098, F-13108 Saint Paul Lez Durance, France
| | - Giovanna C do Carmo
- Department of Animal and Plant Biology, State University of Londrina (UEL), PR 445, Km 380, 86057-970 Londrina, Paraná, Brazil
| | - Gholamreza Gohari
- Department of Horticultural Science, Faculty of Agriculture, University of Maragheh, Maragheh, Iran
| | - Catherine Santaella
- Aix Marseille University, CEA, CNRS, BIAM, LEMiRE, Microbial Ecology of the Rhizosphere, ECCOREV FR 3098, F-13108 Saint Paul Lez Durance, France
| | - Leonardo F Fraceto
- Institute of Science and Technology of Sorocaba, São Paulo State University (UNESP), Av. Três de Março 511, 18087-180 Sorocaba, São Paulo, Brazil
| | - Halley C Oliveira
- Department of Animal and Plant Biology, State University of Londrina (UEL), PR 445, Km 380, 86057-970 Londrina, Paraná, Brazil.
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Gureeva MV, Gureev AP. Molecular Mechanisms Determining the Role of Bacteria from the Genus Azospirillum in Plant Adaptation to Damaging Environmental Factors. Int J Mol Sci 2023; 24:ijms24119122. [PMID: 37298073 DOI: 10.3390/ijms24119122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Revised: 05/19/2023] [Accepted: 05/22/2023] [Indexed: 06/12/2023] Open
Abstract
Agricultural plants are continuously exposed to environmental stressors, which can lead to a significant reduction in yield and even the death of plants. One of the ways to mitigate stress impacts is the inoculation of plant growth-promoting rhizobacteria (PGPR), including bacteria from the genus Azospirillum, into the rhizosphere of plants. Different representatives of this genus have different sensitivities or resistances to osmotic stress, pesticides, heavy metals, hydrocarbons, and perchlorate and also have the ability to mitigate the consequences of such stresses for plants. Bacteria from the genus Azospirillum contribute to the bioremediation of polluted soils and induce systemic resistance and have a positive effect on plants under stress by synthesizing siderophores and polysaccharides and modulating the levels of phytohormones, osmolytes, and volatile organic compounds in plants, as well as altering the efficiency of photosynthesis and the antioxidant defense system. In this review, we focus on molecular genetic features that provide bacterial resistance to various stress factors as well as on Azospirillum-related pathways for increasing plant resistance to unfavorable anthropogenic and natural factors.
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Affiliation(s)
- Maria V Gureeva
- Department of Biochemistry and Cell Physiology, Voronezh State University, 394018 Voronezh, Russia
| | - Artem P Gureev
- Department of Biochemistry and Cell Physiology, Voronezh State University, 394018 Voronezh, Russia
- Department of Genetics, Cytology and Bioengineering, Voronezh State University, 394018 Voronezh, Russia
- Laboratory of Metagenomics and Food Biotechnology, Voronezh State University of Engineering Technology, 394036 Voronezh, Russia
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Tanveer S, Akhtar N, Ilyas N, Sayyed R, Fitriatin BN, Perveen K, Bukhari NA. Interactive effects of Pseudomonas putida and salicylic acid for mitigating drought tolerance in canola ( Brassica napus L.). Heliyon 2023; 9:e14193. [PMID: 36950648 PMCID: PMC10025117 DOI: 10.1016/j.heliyon.2023.e14193] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2022] [Revised: 02/19/2023] [Accepted: 02/23/2023] [Indexed: 03/11/2023] Open
Abstract
This research was designed to analyze the interactive effects of Pseudomonas putida and salicylic acid on the growth of canola in stress and non-stress conditions. Salicylic acid is a phenolic derivative, that has a direct involvement in various plant stages like growth, and inflorescence. While Pseudomonas putida is a drought-tolerant strain having plant growth-promoting characteristics like phosphate solubilization, indole acetic acid, and catalase production. Combined application of Pseudomonas putida and salicylic acid has the ability to develop stress tolerance in plants and also improve growth of plants. They have significant (p < 0.05) effects on germination and morphological, physiological, and biochemical parameters. The plants that received the co-application of Pseudomonas putida and salicylic acid gave more significant results than their alone application. They showed enhanced germination percentage, germination index, promptness index and, seedling vigor index by 19%, 18%, 34% and, 27%, respectively. There was a substantial increase of 25%, 27%, and 39% in shoot length, root length, and leaf area, respectively. The synergistic effect of both treatments has caused a 14% and 12% increase in the Canola plants' relative water content and membrane stability index respectively. A substantial increase of 18% in proline content was observed by the inoculation of Pseudomonas putida, whereas proline content was increased by 28% by the exogenous application of salicylic acid. The content of flavonoids (39%) and phenol (40%) was significantly increased by the co-application. The increase in superoxide dismutase (46%), ascorbate peroxidase (43%), and glutathione (19%) were also significant. The present research demonstrated that the combined application of Pseudomonas putida and salicylic acid induces drought tolerance in canola and significantly improves its growth.
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Affiliation(s)
- Sundas Tanveer
- Department of Botany, PMAS-Arid Agriculture University, Rawalpindi, 46300, Pakistan
| | - Nosheen Akhtar
- Department of Botany, PMAS-Arid Agriculture University, Rawalpindi, 46300, Pakistan
| | - Noshin Ilyas
- Department of Botany, PMAS-Arid Agriculture University, Rawalpindi, 46300, Pakistan
- Corresponding author. Department of Botany, PMAS-Arid Agriculture University, Rawalpindi, 46300, Pakistan.
| | - R.Z. Sayyed
- Asian PGPR Society, Department of Entomology, Auburn University, Auburn, AL 36830, USA
| | | | - Kahkashan Perveen
- Department of Botany & Microbiology, College of Science, P.O. Box-22452, King Saud University, Riyadh, 11495, Saudi Arabia
| | - Najat A. Bukhari
- Department of Botany & Microbiology, College of Science, P.O. Box-22452, King Saud University, Riyadh, 11495, Saudi Arabia
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Mechanisms and Applications of Bacterial Inoculants in Plant Drought Stress Tolerance. Microorganisms 2023; 11:microorganisms11020502. [PMID: 36838467 PMCID: PMC9958599 DOI: 10.3390/microorganisms11020502] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Revised: 02/15/2023] [Accepted: 02/16/2023] [Indexed: 02/19/2023] Open
Abstract
Agricultural systems are highly affected by climatic factors such as temperature, rain, humidity, wind, and solar radiation, so the climate and its changes are major risk factors for agricultural activities. A small portion of the agricultural areas of Brazil is irrigated, while the vast majority directly depends on the natural variations of the rains. The increase in temperatures due to climate change will lead to increased water consumption by farmers and a reduction in water availability, putting production capacity at risk. Drought is a limiting environmental factor for plant growth and one of the natural phenomena that most affects agricultural productivity. The response of plants to water stress is complex and involves coordination between gene expression and its integration with hormones. Studies suggest that bacteria have mechanisms to mitigate the effects of water stress and promote more significant growth in these plant species. The underlined mechanism involves root-to-shoot phenotypic changes in growth rate, architecture, hydraulic conductivity, water conservation, plant cell protection, and damage restoration through integrating phytohormones modulation, stress-induced enzymatic apparatus, and metabolites. Thus, this review aims to demonstrate how plant growth-promoting bacteria could mitigate negative responses in plants exposed to water stress and provide examples of technological conversion applied to agroecosystems.
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Zamanzadeh-Nasrabadi SM, Mohammadiapanah F, Hosseini-Mazinani M, Sarikhan S. Salinity stress endurance of the plants with the aid of bacterial genes. Front Genet 2023; 14:1049608. [PMID: 37139239 PMCID: PMC10149814 DOI: 10.3389/fgene.2023.1049608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Accepted: 03/23/2023] [Indexed: 05/05/2023] Open
Abstract
The application of plant growth-promoting bacteria (PGPB) is vital for sustainable agriculture with continuous world population growth and an increase in soil salinity. Salinity is one of the severe abiotic stresses which lessens the productivity of agricultural lands. Plant growth-promoting bacteria are key players in solving this problem and can mitigate salinity stress. The highest of reported halotolerant Plant growth-promoting bacteria belonged to Firmicutes (approximately 50%), Proteobacteria (40%), and Actinobacteria (10%), respectively. The most dominant genera of halotolerant plant growth-promoting bacteria are Bacillus and Pseudomonas. Currently, the identification of new plant growth-promoting bacteria with special beneficial properties is increasingly needed. Moreover, for the effective use of plant growth-promoting bacteria in agriculture, the unknown molecular aspects of their function and interaction with plants must be defined. Omics and meta-omics studies can unreveal these unknown genes and pathways. However, more accurate omics studies need a detailed understanding of so far known molecular mechanisms of plant stress protection by plant growth-promoting bacteria. In this review, the molecular basis of salinity stress mitigation by plant growth-promoting bacteria is presented, the identified genes in the genomes of 20 halotolerant plant growth-promoting bacteria are assessed, and the prevalence of their involved genes is highlighted. The genes related to the synthesis of indole acetic acid (IAA) (70%), siderophores (60%), osmoprotectants (80%), chaperons (40%), 1-aminocyclopropane-1-carboxylate (ACC) deaminase (50%), and antioxidants (50%), phosphate solubilization (60%), and ion homeostasis (80%) were the most common detected genes in the genomes of evaluated halotolerant plant growth-promoting and salinity stress-alleviating bacteria. The most prevalent genes can be applied as candidates for designing molecular markers for screening of new halotolerant plant growth-promoting bacteria.
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Affiliation(s)
- Seyyedeh Maryam Zamanzadeh-Nasrabadi
- Pharmaceutial Biotechnology Lab, School of Biology and Center of Excellence in Phylogeny of Living Organisms, College of Science, University of Tehran, Tehran, Iran
| | - Fatemeh Mohammadiapanah
- Pharmaceutial Biotechnology Lab, School of Biology and Center of Excellence in Phylogeny of Living Organisms, College of Science, University of Tehran, Tehran, Iran
- *Correspondence: Fatemeh Mohammadiapanah,
| | | | - Sajjad Sarikhan
- Molecular Bank, Iranian Biological Resource Center (IBRC), ACECR, Tehran, Iran
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Wang X, Song Q, Guo H, Liu Y, Brestic M, Yang X. StICE1 enhances plant cold tolerance by directly upregulating StLTI6A expression. PLANT CELL REPORTS 2023; 42:197-210. [PMID: 36371722 DOI: 10.1007/s00299-022-02949-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2022] [Accepted: 11/01/2022] [Indexed: 06/16/2023]
Abstract
Under cold conditions, StICE1 enhances plant cold tolerance by upregulating StLTI6A expression to maintain the cell membrane stability. Cold stress affects potato plants growth and development, crop productivity and quality. The ICE-CBF-COR regulatory cascade is the well-known pathway in response to cold stress in plants. ICE1, as a MYC-like bHLH transcription factor, can regulate the expressions of CBFs. However, whether ICE1 could regulate other genes still need to be explored. Our results showed that overexpressing ICE1 from potato in Arabidopsis thaliana could enhance plant cold tolerance. Under cold stress, overexpressed StICE1 in plants improved the stability of cell membrane, enhanced scavenging capacity of reactive oxygen species and increased expression levels of CBFs and COR genes. Furthermore, StICE1 could bind to the promoter of StLTI6A gene, which could maintain the stability of the cell membrane, to upregulate StLTI6A expression under cold conditions. Our findings revealed that StICE1 could directly regulate StLTI6A, CBF and COR genes expression to response to cold stress.
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Affiliation(s)
- Xipan Wang
- State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Taian, 271018, China
| | - Qiping Song
- State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Taian, 271018, China
| | - Hao Guo
- State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Taian, 271018, China
| | - Yang Liu
- State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Taian, 271018, China
| | - Marian Brestic
- Department of Plant Physiology, Slovak University of Agriculture, A. Hlinku 2, Nitra, 94976, Slovak Republic
| | - Xinghong Yang
- State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Taian, 271018, China.
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10
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Song Q, Wang X, Liu Y, Brestic M, Yang X. StLTO1, a lumen thiol oxidoreductase in Solanum tuberosum L., enhances the cold resistance of potato plants. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2022; 325:111481. [PMID: 36181944 DOI: 10.1016/j.plantsci.2022.111481] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2022] [Revised: 09/19/2022] [Accepted: 09/26/2022] [Indexed: 06/16/2023]
Abstract
Cold stress reduces plant photosynthesis and increases the accumulation of reactive oxygen species (ROS) in plants, thereby dramatically affecting plant growth, crop productivity and quality. Here, we report that lumen thiol oxidoreductase 1 (StLTO1), a vitamin K epoxide reductase (VKOR)-like protein in the thylakoid membrane of Solanum tuberosum L., enhances the cold tolerance of potato plants. Under normal conditions, overexpression of StLTO1 in plants promoted plant growth. In addition, potato plants overexpressing StLTO1 displayed enhanced photosynthetic capacity and increased capacity for scavenging ROS compared to StLTO1 knockdown and wild-type potato plants under cold conditions. Overexpression of StLTO1 in potato plants also improved cold-regulated (COR) gene expression after cold stress. Our results suggest that StLTO1 acts as a positive regulator of cold resistance in potato plants.
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Affiliation(s)
- Qiping Song
- College of Life Science, State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, 271018, China
| | - Xipan Wang
- College of Life Science, State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, 271018, China
| | - Yang Liu
- College of Life Science, State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, 271018, China
| | - Marian Brestic
- Department of Plant Physiology, Slovak University of Agriculture, Tr. A. Hlinku 2, 949 76 Nitra, Slovak Republic
| | - Xinghong Yang
- College of Life Science, State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, 271018, China.
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11
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Cruz C, Cardoso P, Santos J, Matos D, Figueira E. Bioprospecting Soil Bacteria from Arid Zones to Increase Plant Tolerance to Drought: Growth and Biochemical Status of Maize Inoculated with Plant Growth-Promoting Bacteria Isolated from Sal Island, Cape Verde. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11212912. [PMID: 36365367 PMCID: PMC9656834 DOI: 10.3390/plants11212912] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Revised: 10/25/2022] [Accepted: 10/27/2022] [Indexed: 05/14/2023]
Abstract
Climate change and anthropogenic activities are responsible for extensive crop yield losses, with negative impact on global agricultural production. The occurrence of extreme weather events such as drought is a big challenge for agriculture, negatively impacting crops. Thus, methodologies reducing crop dependence on water will be a great advantage. Plant roots are colonized by soil bacteria, that can establish beneficial associations with plants, increasing crop productivity and plant tolerance to abiotic stresses. The aim of this study was to promote plant growth and to increase crop tolerance to drought by inoculation with osmotolerant bacterial strains. For that, bacteria were isolated from plants growing in Sal Island (Cape Verde) and identified. The osmotolerance and plant-growth promotion (PGP) abilities of the strains were determined. A maize seed cultivar tolerant to drought was inoculated with the strains evidencing best PGP capacity and osmo-tolerance. Results evidenced the ability of some bacterial strains increasing the development and inducing osmotolerance in plants. These results evidence the potential of osmotolerant bacteria to further increase the level of tolerance of maize varieties tolerant to drought, decreasing the dependence of this crop on irrigation, and open new perspectives to growth maize in drought affected areas and to use water more efficiently.
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Affiliation(s)
- Catarina Cruz
- Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Paulo Cardoso
- Centre for Environmental and Marine Studies, Department of Biology & CESAM, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Jacinta Santos
- Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Diana Matos
- Centre for Environmental and Marine Studies, Department of Biology & CESAM, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Etelvina Figueira
- Centre for Environmental and Marine Studies, Department of Biology & CESAM, University of Aveiro, 3810-193 Aveiro, Portugal
- Correspondence:
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12
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Khanna K, Kohli SK, Sharma N, Kour J, Devi K, Bhardwaj T, Dhiman S, Singh AD, Sharma N, Sharma A, Ohri P, Bhardwaj R, Ahmad P, Alam P, Albalawi TH. Phytomicrobiome communications: Novel implications for stress resistance in plants. Front Microbiol 2022; 13:912701. [PMID: 36274695 PMCID: PMC9583171 DOI: 10.3389/fmicb.2022.912701] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Accepted: 07/15/2022] [Indexed: 11/13/2022] Open
Abstract
The agricultural sector is a foremost contributing factor in supplying food at the global scale. There are plethora of biotic as well as abiotic stressors that act as major constraints for the agricultural sector in terms of global food demand, quality, and security. Stresses affect rhizosphere and their communities, root growth, plant health, and productivity. They also alter numerous plant physiological and metabolic processes. Moreover, they impact transcriptomic and metabolomic changes, causing alteration in root exudates and affecting microbial communities. Since the evolution of hazardous pesticides and fertilizers, productivity has experienced elevation but at the cost of impeding soil fertility thereby causing environmental pollution. Therefore, it is crucial to develop sustainable and safe means for crop production. The emergence of various pieces of evidence depicting the alterations and abundance of microbes under stressed conditions proved to be beneficial and outstanding for maintaining plant legacy and stimulating their survival. Beneficial microbes offer a great potential for plant growth during stresses in an economical manner. Moreover, they promote plant growth with regulating phytohormones, nutrient acquisition, siderophore synthesis, and induce antioxidant system. Besides, acquired or induced systemic resistance also counteracts biotic stresses. The phytomicrobiome exploration is crucial to determine the growth-promoting traits, colonization, and protection of plants from adversities caused by stresses. Further, the intercommunications among rhizosphere through a direct/indirect manner facilitate growth and form complex network. The phytomicrobiome communications are essential for promoting sustainable agriculture where microbes act as ecological engineers for environment. In this review, we have reviewed our building knowledge about the role of microbes in plant defense and stress-mediated alterations within the phytomicrobiomes. We have depicted the defense biome concept that infers the design of phytomicrobiome communities and their fundamental knowledge about plant-microbe interactions for developing plant probiotics.
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Affiliation(s)
- Kanika Khanna
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
- Department of Microbiology, DAV University, Jalandhar, India
| | - Sukhmeen Kaur Kohli
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Nandni Sharma
- Department of Zoology, Guru Nanak Dev University, Amritsar, India
| | - Jaspreet Kour
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Kamini Devi
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Tamanna Bhardwaj
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Shalini Dhiman
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Arun Dev Singh
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Neerja Sharma
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Anket Sharma
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, China
| | - Puja Ohri
- Department of Zoology, Guru Nanak Dev University, Amritsar, India
| | - Renu Bhardwaj
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Parvaiz Ahmad
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, Saudi Arabia
- Department of Botany, S.P. College Srinagar, Jammu and Kashmir, India
| | - Pravej Alam
- Department of Biology, College of Science and Humanities, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Thamer H. Albalawi
- Department of Biology, College of Science and Humanities, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
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13
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Thiebaut F, Urquiaga MCDO, Rosman AC, da Silva ML, Hemerly AS. The Impact of Non-Nodulating Diazotrophic Bacteria in Agriculture: Understanding the Molecular Mechanisms That Benefit Crops. Int J Mol Sci 2022; 23:ijms231911301. [PMID: 36232602 PMCID: PMC9569789 DOI: 10.3390/ijms231911301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Revised: 09/19/2022] [Accepted: 09/21/2022] [Indexed: 11/16/2022] Open
Abstract
Agriculture is facing increasing challenges with regard to achieving sustainable growth in productivity without negatively impacting the environment. The use of bioinoculants is emerging as a sustainable solution for agriculture, especially bioinoculants based on diazotrophic bacteria. Brazil is at the forefront of studies intended to identify beneficial diazotrophic bacteria, as well as in the molecular characterization of this association on both the bacterial and plant sides. Here we highlight the main advances in molecular studies to understand the benefits brought to plants by diazotrophic bacteria. Different molecular pathways in plants are regulated both genetically and epigenetically, providing better plant performance. Among them, we discuss the involvement of genes related to nitrogen metabolism, cell wall formation, antioxidant metabolism, and regulation of phytohormones that can coordinate plant responses to environmental factors. Another important aspect in this regard is how the plant recognizes the microorganism as beneficial. A better understanding of plant–bacteria–environment interactions can assist in the future formulation of more efficient bioinoculants, which could in turn contribute to more sustainable agriculture practices.
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14
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Kour D, Yadav AN. Bacterial Mitigation of Drought Stress in Plants: Current Perspectives and Future Challenges. Curr Microbiol 2022; 79:248. [PMID: 35834053 DOI: 10.1007/s00284-022-02939-w] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2021] [Accepted: 06/17/2022] [Indexed: 11/28/2022]
Abstract
Climate change is emerging as a crucial issue with global attention and leading to abiotic stress conditions. There are different abiotic stress which affects the crop production among which drought is known to be most destructive stress affecting crop productivity and world's food security. Different approaches are under consideration to increase adaptability of the plants under drought stress with plant-microbe interactions being a greater area of focus. Stress-adaptive microbes either from the rhizosphere, internal tissue, or aerial parts of plants have been reported which through different mechanisms help the plants to cope up with drought and also promote their growth. These mechanisms include the accumulation of osmolytes, decrease in the inhibitory levels of ethylene by aminocyclopropane-1-carboxylate (ACC) deaminase enzyme, and furnishing the unavailable nutrients to plants. Microbial genera including Azotobacter, Bacillus, Ochrobactrum, Pseudomonas, and Serratia are known to be self-adaptive and growth promoters under drought stressed conditions. Stress-adaptive plant growth promoting (PGP) microbes thus are excellent candidates for stress alleviation in drought environment to provide maximum benefits to the plants. The present review deals with the effect of the drought stress on plants, biodiversity of the drought-adaptive microbes, mechanisms of the drought stress alleviation through enhancement of stress alleviators, reduction of the stress aggravators, and modification of the molecular pathways as well as the multiple PGP attributes of the drought-adaptive microbes.
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Affiliation(s)
- Divjot Kour
- Department of Microbiology, Akal College of Basic Sciences, Eternal University, Baru Sahib, Sirmour, 173101, India
| | - Ajar Nath Yadav
- Department of Biotechnology, Dr. Khem Singh Gill Akal College of Agriculture, Eternal University, Baru Sahib, Sirmour, 173101, India.
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15
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Berrios L, Rentsch JD. Linking Reactive Oxygen Species (ROS) to Abiotic and Biotic Feedbacks in Plant Microbiomes: The Dose Makes the Poison. Int J Mol Sci 2022; 23:ijms23084402. [PMID: 35457220 PMCID: PMC9030523 DOI: 10.3390/ijms23084402] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2022] [Revised: 04/13/2022] [Accepted: 04/13/2022] [Indexed: 12/13/2022] Open
Abstract
In nature, plants develop in complex, adaptive environments. Plants must therefore respond efficiently to environmental stressors to maintain homeostasis and enhance their fitness. Although many coordinated processes remain integral for achieving homeostasis and driving plant development, reactive oxygen species (ROS) function as critical, fast-acting orchestrators that link abiotic and biotic responses to plant homeostasis and development. In addition to the suite of enzymatic and non-enzymatic ROS processing pathways that plants possess, they also rely on their microbiota to buffer and maintain the oxidative window needed to balance anabolic and catabolic processes. Strong evidence has been communicated recently that links ROS regulation to the aggregated function(s) of commensal microbiota and plant-growth-promoting microbes. To date, many reports have put forth insightful syntheses that either detail ROS regulation across plant development (independent of plant microbiota) or examine abiotic–biotic feedbacks in plant microbiomes (independent of clear emphases on ROS regulation). Here we provide a novel synthesis that incorporates recent findings regarding ROS and plant development in the context of both microbiota regulation and plant-associated microbes. Specifically, we discuss various roles of ROS across plant development to strengthen the links between plant microbiome functioning and ROS regulation for both basic and applied research aims.
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Affiliation(s)
- Louis Berrios
- Department of Biology, Stanford University, Stanford, CA 94305, USA
- Correspondence:
| | - Jeremy D. Rentsch
- Department of Biology, Francis Marion University, Florence, SC 29502, USA;
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16
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Wang F, Wei Y, Yan T, Wang C, Chao Y, Jia M, An L, Sheng H. Sphingomonas sp. Hbc-6 alters physiological metabolism and recruits beneficial rhizosphere bacteria to improve plant growth and drought tolerance. FRONTIERS IN PLANT SCIENCE 2022; 13:1002772. [PMID: 36388485 PMCID: PMC9650444 DOI: 10.3389/fpls.2022.1002772] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Accepted: 10/12/2022] [Indexed: 05/13/2023]
Abstract
Drought poses a serious threat to plant growth. Plant growth-promoting bacteria (PGPB) have great potential to improve plant nutrition, yield, and drought tolerance. Sphingomonas is an important microbiota genus that is extensively distributed in the plant or rhizosphere. However, the knowledge of its plant growth-promoting function in dry regions is extremely limited. In this study, we investigated the effects of PGPB Sphingomonas sp. Hbc-6 on maize under normal conditions and drought stress. We found that Hbc-6 increased the biomass of maize under normal conditions and drought stress. For instance, the root fresh weight and shoot dry weight of inoculated maize increased by 39.1% and 34.8% respectively compared with non-inoculated plant, while they increased by 61.3% and 96.3% respectively under drought conditions. Hbc-6 also promoted seed germination, maintained stomatal morphology and increased chlorophyll content so as to enhance photosynthesis of plants. Hbc-6 increased antioxidant enzyme (catalase, superoxide, peroxidase) activities and osmoregulation substances (proline, soluble sugar) and up-regulated the level of beneficial metabolites (resveratrol, etc.). Moreover, Hbc-6 reshaped the maize rhizosphere bacterial community, increased its richness and diversity, and made the rhizosphere bacterial community more complex to resist stress; Hbc-6 could also recruit more potentially rhizosphere beneficial bacteria which might promote plant growth together with Hbc-6 both under normal and drought stress. In short, Hbc-6 increased maize biomass and drought tolerance through the above ways. Our findings lay a foundation for exploring the complex mechanisms of interactions between Sphingomonas and plants, and it is important that Sphingomonas sp. Hbc-6 can be used as a potential biofertilizer in agricultural production, which will assist finding new solutions for improving the growth and yield of crops in arid areas.
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Affiliation(s)
- Fang Wang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Yali Wei
- Center for Terrestrial Biodiversity of the South China Sea, Hainan University, Haikou, China
| | - Taozhe Yan
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Cuicui Wang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Yinghui Chao
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Mingyue Jia
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Lizhe An
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
- The College of Forestry, Beijing Forestry University, Beijing, China
- *Correspondence: Lizhe An, ; Hongmei Sheng,
| | - Hongmei Sheng
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
- *Correspondence: Lizhe An, ; Hongmei Sheng,
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17
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Poria V, Dębiec-Andrzejewska K, Fiodor A, Lyzohub M, Ajijah N, Singh S, Pranaw K. Plant Growth-Promoting Bacteria (PGPB) integrated phytotechnology: A sustainable approach for remediation of marginal lands. FRONTIERS IN PLANT SCIENCE 2022; 13:999866. [PMID: 36340355 PMCID: PMC9634634 DOI: 10.3389/fpls.2022.999866] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2022] [Accepted: 10/04/2022] [Indexed: 05/13/2023]
Abstract
Land that has little to no utility for agriculture or industry is considered marginal land. This kind of terrain is frequently found on the edge of deserts or other arid regions. The amount of land that can be used for agriculture continues to be constrained by increasing desertification, which is being caused by climate change and the deterioration of agriculturally marginal areas. Plants and associated microorganisms are used to remediate and enhance the soil quality of marginal land. They represent a low-cost and usually long-term solution for restoring soil fertility. Among various phytoremediation processes (viz., phytodegradation, phytoextraction, phytostabilization, phytovolatilization, phytofiltration, phytostimulation, and phytodesalination), the employment of a specific mechanism is determined by the state of the soil, the presence and concentration of contaminants, and the plant species involved. This review focuses on the key economically important plants used for phytoremediation, as well as the challenges to plant growth and phytoremediation capability with emphasis on the advantages and limits of plant growth in marginal land soil. Plant growth-promoting bacteria (PGPB) boost plant development and promote soil bioremediation by secreting a variety of metabolites and hormones, through nitrogen fixation, and by increasing other nutrients' bioavailability through mineral solubilization. This review also emphasizes the role of PGPB under different abiotic stresses, including heavy-metal-contaminated land, high salinity environments, and organic contaminants. In our opinion, the improved soil fertility of marginal lands using PGPB with economically significant plants (e.g., Miscanthus) in dual precession technology will result in the reclamation of general agriculture as well as the restoration of native vegetation.
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Affiliation(s)
- Vikram Poria
- Department of Microbiology, Central University of Haryana, Mahendergarh, India
| | - Klaudia Dębiec-Andrzejewska
- Department of Environmental Microbiology and Biotechnology, Institute of Microbiology, Faculty of Biology, University of Warsaw, Warsaw, Poland
| | - Angelika Fiodor
- Department of Environmental Microbiology and Biotechnology, Institute of Microbiology, Faculty of Biology, University of Warsaw, Warsaw, Poland
| | - Marharyta Lyzohub
- Department of Environmental Microbiology and Biotechnology, Institute of Microbiology, Faculty of Biology, University of Warsaw, Warsaw, Poland
| | - Nur Ajijah
- Department of Environmental Microbiology and Biotechnology, Institute of Microbiology, Faculty of Biology, University of Warsaw, Warsaw, Poland
| | - Surender Singh
- Department of Microbiology, Central University of Haryana, Mahendergarh, India
| | - Kumar Pranaw
- Department of Environmental Microbiology and Biotechnology, Institute of Microbiology, Faculty of Biology, University of Warsaw, Warsaw, Poland
- *Correspondence: Kumar Pranaw, ;
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18
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do Carmo GC, Iastrenski LF, Debiasi TV, da Silva RC, Gomes DG, Pelegrino MT, Bianchini E, Stolf-Moreira R, Pimenta JA, Seabra AB, Oliveira HC. Nanoencapsulation improves the protective effects of a nitric oxide donor on drought-stressed Heliocarpus popayanensis seedlings. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 225:112713. [PMID: 34478983 DOI: 10.1016/j.ecoenv.2021.112713] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Revised: 07/30/2021] [Accepted: 08/25/2021] [Indexed: 05/23/2023]
Abstract
Despite the important role played by nitric oxide (NO) in plants subjected to abiotic stress, NO donors application to induce drought tolerance in neotropical tree seedlings has not yet been tested. It is also worth investigating whether NO bioactivity in drought-stressed seedlings could be potentiated by NO donors nanoencapsulation. The aim of the current study is to evaluate the effects of chitosan nanoparticles (NPs) containing S-nitroso-mercaptosuccinic acid (S-nitroso-MSA) on drought-stressed seedlings of neotropical tree species Heliocarpus popayanensis Kunth in comparison to free NO donor and NPs loaded with non-nitrosated MSA. Nanoencapsulation slowed down NO release from S-nitroso-MSA, and nanoencapsulated S-nitroso-MSA yielded 2- and 1.6-fold higher S-nitrosothiol levels in H. popayanensis roots and leaves, respectively, than the free NO donor. S-nitroso-MSA has prevented drought-induced CO2 assimilation inhibition, regardless of nanoencapsulation, but the nanoencapsulated NO donor has induced earlier ameliorative effect. Both NO and MSA have decreased oxidative stress in H. popayanensis roots, but this effect was not associated with antioxidant enzyme induction, with higher seedling biomass, or with proline and glycine betaine accumulation. Nanoencapsulated S-nitroso-MSA was the only formulation capable of increasing leaf relative water content in drought-stressed plants (from 32.3% to 60.5%). In addition, it induced root hair formation (increase by 36.6% in comparison to well-hydrated plants). Overall, results have evidenced that nanoencapsulation was capable of improving the protective effect of S-nitroso-MSA on H. popayanensis seedlings subjected to drought stress, a fact that highlighted the potential application of NO-releasing NPs to obtain drought-tolerant tree seedlings for reforestation programs.
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Affiliation(s)
- Giovanna Camargo do Carmo
- Department of Animal and Plant Biology, Universidade Estadual de Londrina (UEL), Rodovia Celso Garcia Cid, km 380, CEP 86057-970, Londrina, PR, Brazil
| | - Lorena Felix Iastrenski
- Department of Animal and Plant Biology, Universidade Estadual de Londrina (UEL), Rodovia Celso Garcia Cid, km 380, CEP 86057-970, Londrina, PR, Brazil
| | - Tatiane Viegas Debiasi
- Department of Animal and Plant Biology, Universidade Estadual de Londrina (UEL), Rodovia Celso Garcia Cid, km 380, CEP 86057-970, Londrina, PR, Brazil
| | - Rafael Caetano da Silva
- Department of Animal and Plant Biology, Universidade Estadual de Londrina (UEL), Rodovia Celso Garcia Cid, km 380, CEP 86057-970, Londrina, PR, Brazil
| | - Diego Genuário Gomes
- Department of Animal and Plant Biology, Universidade Estadual de Londrina (UEL), Rodovia Celso Garcia Cid, km 380, CEP 86057-970, Londrina, PR, Brazil
| | - Milena Trevisan Pelegrino
- Center for Natural and Human Sciences, Universidade Federal do ABC (UFABC), Av. dos Estados 5001, CEP 09210-580, Santo André, SP, Brazil
| | - Edmilson Bianchini
- Department of Animal and Plant Biology, Universidade Estadual de Londrina (UEL), Rodovia Celso Garcia Cid, km 380, CEP 86057-970, Londrina, PR, Brazil
| | - Renata Stolf-Moreira
- Department of Animal and Plant Biology, Universidade Estadual de Londrina (UEL), Rodovia Celso Garcia Cid, km 380, CEP 86057-970, Londrina, PR, Brazil
| | - José Antonio Pimenta
- Department of Animal and Plant Biology, Universidade Estadual de Londrina (UEL), Rodovia Celso Garcia Cid, km 380, CEP 86057-970, Londrina, PR, Brazil
| | - Amedea Barozzi Seabra
- Center for Natural and Human Sciences, Universidade Federal do ABC (UFABC), Av. dos Estados 5001, CEP 09210-580, Santo André, SP, Brazil
| | - Halley Caixeta Oliveira
- Department of Animal and Plant Biology, Universidade Estadual de Londrina (UEL), Rodovia Celso Garcia Cid, km 380, CEP 86057-970, Londrina, PR, Brazil.
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19
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Nascimento FX, Urón P, Glick BR, Giachini A, Rossi MJ. Genomic Analysis of the 1-Aminocyclopropane-1-Carboxylate Deaminase-Producing Pseudomonas thivervalensis SC5 Reveals Its Multifaceted Roles in Soil and in Beneficial Interactions With Plants. Front Microbiol 2021; 12:752288. [PMID: 34659189 PMCID: PMC8515041 DOI: 10.3389/fmicb.2021.752288] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Accepted: 08/31/2021] [Indexed: 11/13/2022] Open
Abstract
Beneficial 1-aminocyclopropane-1-carboxylate (ACC) deaminase-producing bacteria promote plant growth and stress resistance, constituting a sustainable alternative to the excessive use of chemicals in agriculture. In this work, the increased plant growth promotion activity of the ACC deaminase-producing Pseudomonas thivervalensis SC5, its ability to limit the growth of phytopathogens, and the genomics behind these important properties are described in detail. P. thivervalensis SC5 displayed several active plant growth promotion traits and significantly increased cucumber plant growth and resistance against salt stress (100mmol/L NaCl) under greenhouse conditions. Strain SC5 also limited the in vitro growth of the pathogens Botrytis cinerea and Pseudomonas syringae DC3000 indicating active biological control activities. Comprehensive analysis revealed that P. thivervalensis SC5 genome is rich in genetic elements involved in nutrient acquisition (N, P, S, and Fe); osmotic stress tolerance (e.g., glycine-betaine, trehalose, and ectoine biosynthesis); motility, chemotaxis and attachment to plant tissues; root exudate metabolism including the modulation of plant phenolics (e.g., hydroxycinnamic acids), lignin, and flavonoids (e.g., quercetin); resistance against plant defenses (e.g., reactive oxygens species-ROS); plant hormone modulation (e.g., ethylene, auxins, cytokinins, and salicylic acid), and bacterial and fungal phytopathogen antagonistic traits (e.g., 2,4-diacetylphloroglucinol, HCN, a fragin-like non ribosomal peptide, bacteriocins, a lantipeptide, and quorum-quenching activities), bringing detailed insights into the action of this versatile plant-growth-promoting bacterium. Ultimately, the combination of both increased plant growth promotion/protection and biological control abilities makes P. thivervalensis SC5 a prime candidate for its development as a biofertilizer/biostimulant/biocontrol product. The genomic analysis of this bacterium brings new insights into the functioning of Pseudomonas and their role in beneficial plant-microbe interactions.
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Affiliation(s)
- Francisco X Nascimento
- iBET, Instituto de Biologia Experimental e Tecnológica, Oeiras, Portugal.,Laboratório de Microbiologia e Bioprocessos, Departamento de Microbiologia, Universidade Federal de Santa Catarina, Florianópolis, Brazil
| | - Paola Urón
- Laboratório de Microbiologia e Bioprocessos, Departamento de Microbiologia, Universidade Federal de Santa Catarina, Florianópolis, Brazil
| | - Bernard R Glick
- Department of Biology, University of Waterloo, Waterloo, ON, Canada
| | - Admir Giachini
- Laboratório de Microbiologia e Bioprocessos, Departamento de Microbiologia, Universidade Federal de Santa Catarina, Florianópolis, Brazil
| | - Márcio J Rossi
- Laboratório de Microbiologia e Bioprocessos, Departamento de Microbiologia, Universidade Federal de Santa Catarina, Florianópolis, Brazil
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20
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Berrios L, Ely B. Genes related to redox and cell curvature facilitate interactions between Caulobacter strains and Arabidopsis. PLoS One 2021; 16:e0249227. [PMID: 33793620 PMCID: PMC8016251 DOI: 10.1371/journal.pone.0249227] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Accepted: 03/12/2021] [Indexed: 12/28/2022] Open
Abstract
Bacteria play an integral role in shaping plant growth and development. However, the genetic factors that facilitate plant-bacteria interactions remain largely unknown. Here, we demonstrated the importance of two bacterial genetic factors that facilitate the interactions between plant-growth-promoting (PGP) bacteria in the genus Caulobacter and the host plant Arabidopsis. Using homologous recombination, we disrupted the cytochrome ubiquinol oxidase (cyo) operon in both C. vibrioides CB13 and C. segnis TK0059 by knocking out the expression of cyoB (critical subunit of the cyo operon) and showed that the mutant strains were unable to enhance the growth of Arabidopsis. In addition, disruption of the cyo operon, metabolomic reconstructions, and pH measurements suggested that both elevated cyoB expression and acid production by strain CB13 contribute to the previously observed inhibition of Arabidopsis seed germination. We also showed that the crescent shape of the PGP bacterial strain C. crescentus CB15 contributes to its ability to enhance plant growth. Thus, we have identified specific genetic factors that explain how select Caulobacter strains interact with Arabidopsis plants.
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Affiliation(s)
- Louis Berrios
- Department of Biological Sciences, University of South Carolina, Columbia, SC, United State of America
- * E-mail:
| | - Bert Ely
- Department of Biological Sciences, University of South Carolina, Columbia, SC, United State of America
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Youssef K, Roberto SR. Chitosan/silica nanocomposite-based formulation alleviated gray mold through stimulation of the antioxidant system in table grapes. Int J Biol Macromol 2020; 168:242-250. [PMID: 33309667 DOI: 10.1016/j.ijbiomac.2020.12.047] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2020] [Revised: 11/24/2020] [Accepted: 12/06/2020] [Indexed: 11/17/2022]
Abstract
The main purpose of this study was to explore the ability of a novel silica/polysaccharide polymer-based formulation, namely, chitosan/silica nanocomposites (CSNs), to directly affect Botrytis cinerea in vitro and in inoculated berries, and indirectly to induce natural host resistance via enzymatic and nonenzymatic antioxidants against gray mold of table grapes. The results indicated a positive correlation in in vitro tests in terms of radial growth, spore germination and germ tube elongation, where those parameters were completely inhibited by CSN at 1%. SEM and TEM investigations showed that morphological and internal structural damage was observed in B. cinerea-hyphae/spores treated with CSN. Additionally, most of the treated spores were affected, and cellular vacuolization and cytoplasmic disorganization were observed. The results revealed that CSN reduced gray mold incidence and severity on inoculated berries directly and indirectly. In direct activity, CSN (1%) reduced mold incidence and severity by 100% compared to the control. In indirect activity, mold incidence and severity was reduced by 51% and 64%, respectively. CSN significantly increased superoxide dismutase, ascorbate peroxidase, peroxidase, total phenol and flavonoid at 48 h post-treatment by 1.2-, 1.6-, 1.3-, 1.3- and 1.6-fold, respectively, in grape-treated tissues. It could be concluded that CSN, as a promising alternative control method against gray mold of table grapes, can directly affect the pathogen and indirectly enhance the natural host resistance of the antioxidant system.
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Affiliation(s)
- Khamis Youssef
- Agricultural Research Center, Plant Pathology Research Institute, 9 Gamaa St., Giza 12619, Egypt.
| | - Sergio Ruffo Roberto
- Department of Agronomy, Agricultural Research Center, Londrina State University, Londrina, PR 86057-970, Brazil
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Youssef K, Roberto SR, Tiepo AN, Constantino LV, de Resende JTV, Abo-Elyousr KA. Salt Solution Treatments Trigger Antioxidant Defense Response against Gray Mold Disease in Table Grapes. J Fungi (Basel) 2020; 6:jof6030179. [PMID: 32962077 PMCID: PMC7558686 DOI: 10.3390/jof6030179] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2020] [Revised: 08/31/2020] [Accepted: 09/09/2020] [Indexed: 11/16/2022] Open
Abstract
To obtain a clear understanding of the mode of action of potassium bicarbonate (PB), sodium silicate (SSi) and calcium chelate (CCh) solutions (1%) in inducing resistance to gray mold disease in table grapes, enzymatic and nonenzymatic investigations were carried out. In particular, changes in the activity of the enzymes superoxide dismutase (SOD), ascorbate peroxidase (APX) and peroxidase (POD), total phenolic content and total flavonoid content were studied. As indirect action, PB, SSi and CCh reduced the incidence of gray mold by 43%, 50% and 41%, respectively. The highest activity of SOD was detected at 48 h in SSi-treated tissue, PB-treated tissue and CCh-treated tissue, and it was 1.7-, 1.4- and 1.2-fold higher, respectively, compared to the control. The APX activity was significantly higher in SSi-treated tissue than in the control at 24, 48 and 72 h and showed an increase in activity 2-fold for all times. Additionally, PB, SSi and CCh increased the activity of POD by 1.4-, 1.2- and 2.7-fold at 48 h posttreatment, respectively. The results showed that CCh was the most pronounced salt to increase both total phenol and flavonoid contents by 1.3 and 2.1, respectively. Additionally, the three tested salts induced an increase in total phenols and total flavonoids at 48 h posttreatment. The obtained result is one more movement towards an overall understanding of the mechanism by which salt solutions act as antimicrobial agents against gray mold of table grapes.
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Affiliation(s)
- Khamis Youssef
- Agricultural Research Center, Plant Pathology Research Institute, 9 Gamaa St., Giza 12619, Egypt
- Correspondence: (K.Y.); (S.R.R.); (J.T.V.d.R.); Tel.: +22-35724893
| | - Sergio Ruffo Roberto
- Department of Agronomy, Agricultural Research Center, Londrina State University, Londrina 86057-970, Brazil;
- Correspondence: (K.Y.); (S.R.R.); (J.T.V.d.R.); Tel.: +22-35724893
| | - Angélica Nunes Tiepo
- Department of Animal and Plant Biology, CCB, Londrina State University, Londrina 86057-970, Brazil;
| | - Leonel Vinicius Constantino
- Department of Agronomy, Agricultural Research Center, Londrina State University, Londrina 86057-970, Brazil;
| | - Juliano Tadeu Vilela de Resende
- Department of Agronomy, Agricultural Research Center, Londrina State University, Londrina 86057-970, Brazil;
- Correspondence: (K.Y.); (S.R.R.); (J.T.V.d.R.); Tel.: +22-35724893
| | - Kamal A.M. Abo-Elyousr
- Department of Arid Land Agriculture, Faculty of Meteorology, Environment and Arid Land Agriculture, King Abdulaziz University, Jeddah 80208, Saudi Arabia;
- Department of Plant Pathology, Faculty of Agriculture, University of Assiut, Assiut 71526, Egypt
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