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Xu Y, Fu Q, Qu M, Chen J, Fan J, Hou S, Lu L. Automated Hematoma Detection and Outcome Prediction in Patients With Traumatic Brain Injury. CNS Neurosci Ther 2024; 30:e70119. [PMID: 39533110 PMCID: PMC11557439 DOI: 10.1111/cns.70119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2024] [Revised: 10/16/2024] [Accepted: 10/29/2024] [Indexed: 11/16/2024] Open
Abstract
PURPOSE To develop a tool for automated subtype classification and segmentation of intracranial hemorrhages (ICH) on CT scans of patients with traumatic brain injury (TBI). Furthermore, outcome prediction for patients can effectively facilitate patient management. METHODS This study presents a cascade framework for two-stage segmentation and multi-label classification. The hematoma region of interest (ROI) is localized, and then the ROI is cropped and resized to the original pixel size before being input into the model again to obtain the segmentation results. In multilabel classification, the mask obtained from automatic segmentation is superimposed onto the corresponding ROI and CT slices, respectively, to constitute the input image. Subsequently, the ROI image is employed as the local network input to obtain local features. Third, the CT image is utilized to construct a feature extraction network to obtain global features. Ultimately, the local and global features are fused dimensions in the pooling layer, and calculated to generate the final retrieval results. For the prediction of 14-day in-hospital mortality, automatically extracted hematoma subtype and volume features were integrated to enhance the widely used CRASH model. RESULTS The proposed segmentation method achieves the best estimates on the Dice similarity coefficient and Jaccard Similarity Index. The proposed multilabel classification method achieved an average accuracy of 95.91%. For mortality prediction, the best model achieved an average area under the receiver operating characteristic curve (AUC) of 0.91 by 5-fold cross-validation. CONCLUSIONS The proposed method enhances the precision of hematoma segmentation and subtype classification. In clinical settings, the method can streamline the evaluation of ICH for radiologists, and the automatically extracted features are anticipated to facilitate prognosis assessment.
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Affiliation(s)
- Yang Xu
- School of Disaster and Emergency MedicineTianjin UniversityTianjinChina
| | - Qiuyu Fu
- Georgia Tech Shenzhen InstituteTianjin UniversityTianjinChina
| | - Mengqi Qu
- School of Disaster and Emergency MedicineTianjin UniversityTianjinChina
| | - Junyao Chen
- School of Disaster and Emergency MedicineTianjin UniversityTianjinChina
| | - Jianqi Fan
- College of Intelligence and ComputingTianjin UniversityTianjinChina
| | - Shike Hou
- School of Disaster and Emergency MedicineTianjin UniversityTianjinChina
| | - Lu Lu
- School of Disaster and Emergency MedicineTianjin UniversityTianjinChina
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Ibrahim NM, Alanize H, Alqahtani L, Alqahtani LJ, Alabssi R, Alsindi W, Alabssi H, AlMuhanna A, Althani H. Deep Learning Approaches for the Assessment of Germinal Matrix Hemorrhage Using Neonatal Head Ultrasound. SENSORS (BASEL, SWITZERLAND) 2024; 24:7052. [PMID: 39517949 PMCID: PMC11548650 DOI: 10.3390/s24217052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/14/2024] [Revised: 10/17/2024] [Accepted: 10/29/2024] [Indexed: 11/16/2024]
Abstract
Germinal matrix hemorrhage (GMH) is a critical condition affecting premature infants, commonly diagnosed through cranial ultrasound imaging. This study presents an advanced deep learning approach for automated GMH grading using the YOLOv8 model. By analyzing a dataset of 586 infants, we classified ultrasound images into five distinct categories: Normal, Grade 1, Grade 2, Grade 3, and Grade 4. Utilizing transfer learning and data augmentation techniques, the YOLOv8 model achieved exceptional performance, with a mean average precision (mAP50) of 0.979 and a mAP50-95 of 0.724. These results indicate that the YOLOv8 model can significantly enhance the accuracy and efficiency of GMH diagnosis, providing a valuable tool to support radiologists in clinical settings.
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Affiliation(s)
- Nehad M. Ibrahim
- Departments of Computer Science, College of Computer Science and Information Technology, Imam Abdulrahman Bin Faisal University, Dammam 31451, Saudi Arabia (L.A.)
| | - Hadeel Alanize
- Departments of Computer Science, College of Computer Science and Information Technology, Imam Abdulrahman Bin Faisal University, Dammam 31451, Saudi Arabia (L.A.)
| | - Lara Alqahtani
- Departments of Computer Science, College of Computer Science and Information Technology, Imam Abdulrahman Bin Faisal University, Dammam 31451, Saudi Arabia (L.A.)
| | - Lama J. Alqahtani
- Departments of Computer Science, College of Computer Science and Information Technology, Imam Abdulrahman Bin Faisal University, Dammam 31451, Saudi Arabia (L.A.)
| | - Raghad Alabssi
- Departments of Computer Science, College of Computer Science and Information Technology, Imam Abdulrahman Bin Faisal University, Dammam 31451, Saudi Arabia (L.A.)
| | - Wadha Alsindi
- Departments of Computer Science, College of Computer Science and Information Technology, Imam Abdulrahman Bin Faisal University, Dammam 31451, Saudi Arabia (L.A.)
| | - Haila Alabssi
- College of Medicine, Imam Abdulrahman Bin Faisal University, Dammam 31441, Saudi Arabia
| | - Afnan AlMuhanna
- Department of Radiology, King Fahad University Hospital, Khobar 34445, Saudi Arabia
| | - Hanadi Althani
- Department of Radiology, King Fahad University Hospital, Khobar 34445, Saudi Arabia
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Sengupta J, Alzbutas R, Iešmantas T, Petkus V, Barkauskienė A, Ratkūnas V, Lukoševičius S, Preikšaitis A, Lapinskienė I, Šerpytis M, Misiulis E, Skarbalius G, Navakas R, Džiugys A. Detection of Subarachnoid Hemorrhage Using CNN with Dynamic Factor and Wandering Strategy-Based Feature Selection. Diagnostics (Basel) 2024; 14:2417. [PMID: 39518384 PMCID: PMC11545384 DOI: 10.3390/diagnostics14212417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2024] [Revised: 10/10/2024] [Accepted: 10/10/2024] [Indexed: 11/16/2024] Open
Abstract
Objectives: Subarachnoid Hemorrhage (SAH) is a serious neurological emergency case with a higher mortality rate. An automatic SAH detection is needed to expedite and improve identification, aiding timely and efficient treatment pathways. The existence of noisy and dissimilar anatomical structures in NCCT images, limited availability of labeled SAH data, and ineffective training causes the issues of irrelevant features, overfitting, and vanishing gradient issues that make SAH detection a challenging task. Methods: In this work, the water waves dynamic factor and wandering strategy-based Sand Cat Swarm Optimization, namely DWSCSO, are proposed to ensure optimum feature selection while a Parametric Rectified Linear Unit with a Stacked Convolutional Neural Network, referred to as PRSCNN, is developed for classifying grades of SAH. The DWSCSO and PRSCNN surpass current practices in SAH detection by improving feature selection and classification accuracy. DWSCSO is proposed to ensure optimum feature selection, avoiding local optima issues with higher exploration capacity and avoiding the issue of overfitting in classification. Firstly, in this work, a modified region-growing method was employed on the patient Non-Contrast Computed Tomography (NCCT) images to segment the regions affected by SAH. From the segmented regions, the wide range of patterns and irregularities, fine-grained textures and details, and complex and abstract features were extracted from pre-trained models like GoogleNet, Visual Geometry Group (VGG)-16, and ResNet50. Next, the PRSCNN was developed for classifying grades of SAH which helped to avoid the vanishing gradient issue. Results: The DWSCSO-PRSCNN obtained a maximum accuracy of 99.48%, which is significant compared with other models. The DWSCSO-PRSCNN provides an improved accuracy of 99.62% in CT dataset compared with the DL-ICH and GoogLeNet + (GLCM and LBP), ResNet-50 + (GLCM and LBP), and AlexNet + (GLCM and LBP), which confirms that DWSCSO-PRSCNN effectively reduces false positives and false negatives. Conclusions: the complexity of DWSCSO-PRSCNN was acceptable in this research, for while simpler approaches appeared preferable, they failed to address problems like overfitting and vanishing gradients. Accordingly, the DWSCSO for optimized feature selection and PRSCNN for robust classification were essential for handling these challenges and enhancing the detection in different clinical settings.
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Affiliation(s)
- Jewel Sengupta
- Department of Mathematics and Natural Sciences, Kaunas University of Technology, K. Donelaičio st. 73, 44249 Kaunas, Lithuania; (R.A.); (T.I.)
| | - Robertas Alzbutas
- Department of Mathematics and Natural Sciences, Kaunas University of Technology, K. Donelaičio st. 73, 44249 Kaunas, Lithuania; (R.A.); (T.I.)
- Laboratory of Heat-Equipment Research and Testing, Lithuanian Energy Institute, Breslaujos st. 3, 44403 Kaunas, Lithuania; (E.M.); (G.S.); (R.N.); (A.D.)
| | - Tomas Iešmantas
- Department of Mathematics and Natural Sciences, Kaunas University of Technology, K. Donelaičio st. 73, 44249 Kaunas, Lithuania; (R.A.); (T.I.)
| | - Vytautas Petkus
- Health Telematics Science Institute, Kaunas University of Technology, K. Donelaičio st. 73, 44249 Kaunas, Lithuania;
| | - Alina Barkauskienė
- Center for Radiology and Nuclear Medicine, Vilnius University Hospital Santaros Klinikos, Santariskiu st. 2, 08661 Vilnius, Lithuania;
| | - Vytenis Ratkūnas
- Department of Radiology, Lithuanian University of Health Sciences, Eiveniu st. 2, 50009 Kaunas, Lithuania; (V.R.); (S.L.)
| | - Saulius Lukoševičius
- Department of Radiology, Lithuanian University of Health Sciences, Eiveniu st. 2, 50009 Kaunas, Lithuania; (V.R.); (S.L.)
| | - Aidanas Preikšaitis
- Clinic of Neurology and Neurosurgery, Faculty of Medicine, Vilnius University, M. K. Ciurlionio st. 21, 03101 Vilnius, Lithuania;
| | - Indre Lapinskienė
- Clinic of Anaesthesiology and Intensive Care, Faculty of Medicine, Vilnius University, M. K. Ciurlionio st. 21, 03101 Vilnius, Lithuania; (I.L.); (M.Š.)
| | - Mindaugas Šerpytis
- Clinic of Anaesthesiology and Intensive Care, Faculty of Medicine, Vilnius University, M. K. Ciurlionio st. 21, 03101 Vilnius, Lithuania; (I.L.); (M.Š.)
| | - Edgaras Misiulis
- Laboratory of Heat-Equipment Research and Testing, Lithuanian Energy Institute, Breslaujos st. 3, 44403 Kaunas, Lithuania; (E.M.); (G.S.); (R.N.); (A.D.)
| | - Gediminas Skarbalius
- Laboratory of Heat-Equipment Research and Testing, Lithuanian Energy Institute, Breslaujos st. 3, 44403 Kaunas, Lithuania; (E.M.); (G.S.); (R.N.); (A.D.)
| | - Robertas Navakas
- Laboratory of Heat-Equipment Research and Testing, Lithuanian Energy Institute, Breslaujos st. 3, 44403 Kaunas, Lithuania; (E.M.); (G.S.); (R.N.); (A.D.)
| | - Algis Džiugys
- Laboratory of Heat-Equipment Research and Testing, Lithuanian Energy Institute, Breslaujos st. 3, 44403 Kaunas, Lithuania; (E.M.); (G.S.); (R.N.); (A.D.)
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García-García S, Cepeda S, Arrese I, Sarabia R. A Fully Automated Pipeline Using Swin Transformers for Deep Learning-Based Blood Segmentation on Head Computed Tomography Scans After Aneurysmal Subarachnoid Hemorrhage. World Neurosurg 2024; 190:e762-e773. [PMID: 39111661 DOI: 10.1016/j.wneu.2024.07.216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2024] [Accepted: 07/31/2024] [Indexed: 09/01/2024]
Abstract
BACKGROUND Accurate volumetric assessment of spontaneous aneurysmal subarachnoid hemorrhage (aSAH) is a labor-intensive task performed with current manual and semiautomatic methods that might be relevant for its clinical and prognostic implications. In the present research, we sought to develop and validate an artificial intelligence-driven, fully automated blood segmentation tool for subarachnoid hemorrhage (SAH) patients via noncontrast computed tomography (NCCT) scans employing a transformer-based Swin-UNETR architecture. METHODS We retrospectively analyzed NCCT scans from patients with confirmed aSAH utilizing the Swin-UNETR for segmentation. The performance of the proposed method was evaluated against manually segmented ground truth data using metrics such as Dice score, intersection over union, volumetric similarity index , symmetric average surface distance , sensitivity, and specificity. A validation cohort from an external institution was included to test the generalizability of the model. RESULTS The model demonstrated high accuracy with robust performance metrics across the internal and external validation cohorts. Notably, it achieved high Dice coefficient (0.873 ± 0.097), intersection over union (0.810 ± 0.092), volumetric similarity index (0.840 ± 0.131), sensitivity (0.821 ± 0.217), and specificity (0.996 ± 0.004) values and a low symmetric average surface distance (1.866 ± 2.910), suggesting proficiency in segmenting blood in SAH patients. The model's efficiency was reflected in its processing speed, indicating potential for real-time applications. CONCLUSIONS Our Swin UNETR-based model offers significant advances in the automated segmentation of blood in SAH patients on NCCT images. Despite the computational demands, the model operates effectively on standard hardware with a user-friendly interface, facilitating broader clinical adoption. Further validation across diverse datasets is warranted to confirm its clinical reliability.
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Affiliation(s)
- Sergio García-García
- Neurosurgery Department, Hospital Universitario Rio Hortega, Valladolid, Spain; Neurosurgery Department, Helsinki University Hospital, Helsinki, Finland.
| | - Santiago Cepeda
- Neurosurgery Department, Hospital Universitario Rio Hortega, Valladolid, Spain
| | - Ignacio Arrese
- Neurosurgery Department, Hospital Universitario Rio Hortega, Valladolid, Spain
| | - Rosario Sarabia
- Neurosurgery Department, Hospital Universitario Rio Hortega, Valladolid, Spain
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Uparela-Reyes MJ, Villegas-Trujillo LM, Cespedes J, Velásquez-Vera M, Rubiano AM. Usefulness of Artificial Intelligence in Traumatic Brain Injury: A Bibliometric Analysis and Mini-review. World Neurosurg 2024; 188:83-92. [PMID: 38759786 DOI: 10.1016/j.wneu.2024.05.065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2024] [Accepted: 05/10/2024] [Indexed: 05/19/2024]
Abstract
BACKGROUND Traumatic brain injury (TBI) has become a major source of disability worldwide, increasing the interest in algorithms that use artificial intelligence (AI) to optimize the interpretation of imaging studies, prognosis estimation, and critical care issues. In this study we present a bibliometric analysis and mini-review on the main uses that have been developed for TBI in AI. METHODS The results informing this review come from a Scopus database search as of April 15, 2023. The bibliometric analysis was carried out via the mapping bibliographic metrics method. Knowledge mapping was made in the VOSviewer software (V1.6.18), analyzing the "link strength" of networks based on co-occurrence of key words, countries co-authorship, and co-cited authors. In the mini-review section, we highlight the main findings and contributions of the studies. RESULTS A total of 495 scientific publications were identified from 2000 to 2023, with 9262 citations published since 2013. Among the 160 journals identified, The Journal of Neurotrauma, Frontiers in Neurology, and PLOS ONE were those with the greatest number of publications. The most frequently co-occurring key words were: "machine learning", "deep learning", "magnetic resonance imaging", and "intracranial pressure". The United States accounted for more collaborations than any other country, followed by United Kingdom and China. Four co-citation author clusters were found, and the top 20 papers were divided into reviews and original articles. CONCLUSIONS AI has become a relevant research field in TBI during the last 20 years, demonstrating great potential in imaging, but a more modest performance for prognostic estimation and neuromonitoring.
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Affiliation(s)
- Maria José Uparela-Reyes
- Neurosurgery Section, School of Medicine, Universidad del Valle, Cali, Colombia; Neurosurgery Section, Hospital Universitario del Valle, Cali, Colombia.
| | - Lina María Villegas-Trujillo
- Neurosurgery Section, School of Medicine, Universidad del Valle, Cali, Colombia; School of Biomedical Sciences, Universidad del Valle, Cali, Colombia
| | - Jorge Cespedes
- Comprehensive Epilepsy Center, Yale University, New Haven, Connecticut, USA
| | - Miguel Velásquez-Vera
- Neurosurgery Section, School of Medicine, Universidad del Valle, Cali, Colombia; Neurosurgery Section, Hospital Universitario del Valle, Cali, Colombia
| | - Andrés M Rubiano
- Neurosurgery Section, School of Medicine, Universidad del Valle, Cali, Colombia; Neurosurgery Section, Hospital Universitario del Valle, Cali, Colombia; INUB-Meditech Research Group, Neurosciences Institute, Universidad El Bosque, Bogotá, Colombia
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Zhao Z, Garcia-Campayo J, Liang J, Pu R, Perez HM, Xue X, Borao L, Li H, Masanda AB, Chen J, Portugal LM, Aganan JB. The construction of urban cultural and creative industries using deep learning and information management. Heliyon 2024; 10:e33787. [PMID: 39040397 PMCID: PMC11261889 DOI: 10.1016/j.heliyon.2024.e33787] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2024] [Revised: 06/11/2024] [Accepted: 06/26/2024] [Indexed: 07/24/2024] Open
Abstract
The ongoing transition within the Chinese economy assumes a pivotal role in shaping the landscape of the cultural and creative industries (CCI). Renowned for its environmentally sustainable attributes, coupled with high productivity, CCI has garnered considerable attention across diverse societal strata. This study endeavors to delineate the determinants influencing the developmental trajectory of CCI, with a focal point on City A as the primary subject of investigation, juxtaposed against Cities G, D, B, H, and X for comparative analysis, leveraging developmental data from the year 2021. Initially, the study elucidates the conceptual framework underpinning CCI and its intrinsic significance in facilitating urban metamorphosis. Subsequently, the positive impact of CCI through deep learning and information management technology is emphasized, and a cultural and creative recommendation model based on LSTM algorithm is constructed. Through performance evaluation, the recommendation accuracy for cultural and creative projects reaches 94.74 %. A robust developmental assessment model for CCI is then constructed via meticulous factor analysis of pertinent influencers. Employing factor analysis techniques, the study identifies two primary determinants exerting sway over CCI development: sustainable profitability factors and cultural influence factors. Noteworthy among the factors influencing CCI development within City A are fixed asset investment, cultural industry financing, the proliferation of university-based research institutions, and per capita cultural expenditure by residents. Of these, fixed asset investment, cultural industry financing, and the density of university research institutions prominently impinge upon sustainable profitability, with a discernible impact weight of 0.738 in the evaluative framework of CCI development, thus significantly shaping its trajectory. Moreover, consumer psychological factors, particularly market consumption patterns, are observed to exert a discernible influence on CCI evolution. This study augurs fresh insights into the realm of CCI development, infusing it with renewed vigor and vitality. Moreover, it underscores the inherent interdependence and positive correlation among the various research factors, offering novel perspectives and methodologies germane to the advancement of urban CCI.
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Affiliation(s)
- Zijian Zhao
- Yonsei University, Seoul, 03722, South Korea
- The Catholic University of Korea, Bucheon-si, 14662, South Korea
- University of Zaragoza, Zaragoza, 50009, Spain
- Lyceum of the Philippines University- Batangas, Batangas City, 4200, Philippines
- University of Chinese Academy of Social Sciences, Beijing, 102488, China
- University of San Miguel, Culiacán, 80020, Mexico
- The International Institute of Computing and Societal Education University, Wilmington, DE, 19899, USA
| | | | - Jin Liang
- University of Zaragoza, Zaragoza, 50009, Spain
| | - Ruihui Pu
- Faculty of Economics, Srinakharinwirot University, Bangkok, 10110, Thailand
| | - Hector Monzales Perez
- Republic of the Philippines Professional Regulation Commission, Manila, 1008, Philippines
| | - Xi Xue
- Sichuan University of Media and Communications, Chengdu, 611745, China
| | - Luis Borao
- University of Zaragoza, Zaragoza, 50009, Spain
| | | | | | - Jing Chen
- Lyceum of the Philippines University- Batangas, Batangas City, 4200, Philippines
- Xiamen Institute of Technology, Xiamen, 361021, China
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García-García S, Cepeda S, Müller D, Mosteiro A, Torné R, Agudo S, de la Torre N, Arrese I, Sarabia R. Mortality Prediction of Patients with Subarachnoid Hemorrhage Using a Deep Learning Model Based on an Initial Brain CT Scan. Brain Sci 2023; 14:10. [PMID: 38248225 PMCID: PMC10812955 DOI: 10.3390/brainsci14010010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2023] [Revised: 12/10/2023] [Accepted: 12/21/2023] [Indexed: 01/23/2024] Open
Abstract
BACKGROUND Subarachnoid hemorrhage (SAH) entails high morbidity and mortality rates. Convolutional neural networks (CNN) are capable of generating highly accurate predictions from imaging data. Our objective was to predict mortality in SAH patients by processing initial CT scans using a CNN-based algorithm. METHODS We conducted a retrospective multicentric study of a consecutive cohort of patients with SAH. Demographic, clinical and radiological variables were analyzed. Preprocessed baseline CT scan images were used as the input for training using the AUCMEDI framework. Our model's architecture leveraged a DenseNet121 structure, employing transfer learning principles. The output variable was mortality in the first three months. RESULTS Images from 219 patients were processed; 175 for training and validation and 44 for the model's evaluation. Of the patients, 52% (115/219) were female and the median age was 58 (SD = 13.06) years. In total, 18.5% (39/219) had idiopathic SAH. The mortality rate was 28.5% (63/219). The model showed good accuracy at predicting mortality in SAH patients when exclusively using the images of the initial CT scan (accuracy = 74%, F1 = 75% and AUC = 82%). CONCLUSION Modern image processing techniques based on AI and CNN make it possible to predict mortality in SAH patients with high accuracy using CT scan images as the only input. These models might be optimized by including more data and patients, resulting in better training, development and performance on tasks that are beyond the skills of conventional clinical knowledge.
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Affiliation(s)
- Sergio García-García
- Neurosurgery Department, Rio Hortega University Hospital, 47012 Valladolid, Spain; (S.C.); (S.A.); (N.d.l.T.); (I.A.); (R.S.)
| | - Santiago Cepeda
- Neurosurgery Department, Rio Hortega University Hospital, 47012 Valladolid, Spain; (S.C.); (S.A.); (N.d.l.T.); (I.A.); (R.S.)
| | - Dominik Müller
- IT-Infrastructure for Translational Medical Research, University of Augsburg, 86159 Augsburg, Germany;
| | - Alejandra Mosteiro
- Neurosurgery Department, Hospital Clinic de Barcelona, 08036 Barcelona, Spain; (A.M.); (R.T.)
| | - Ramón Torné
- Neurosurgery Department, Hospital Clinic de Barcelona, 08036 Barcelona, Spain; (A.M.); (R.T.)
| | - Silvia Agudo
- Neurosurgery Department, Rio Hortega University Hospital, 47012 Valladolid, Spain; (S.C.); (S.A.); (N.d.l.T.); (I.A.); (R.S.)
| | - Natalia de la Torre
- Neurosurgery Department, Rio Hortega University Hospital, 47012 Valladolid, Spain; (S.C.); (S.A.); (N.d.l.T.); (I.A.); (R.S.)
| | - Ignacio Arrese
- Neurosurgery Department, Rio Hortega University Hospital, 47012 Valladolid, Spain; (S.C.); (S.A.); (N.d.l.T.); (I.A.); (R.S.)
| | - Rosario Sarabia
- Neurosurgery Department, Rio Hortega University Hospital, 47012 Valladolid, Spain; (S.C.); (S.A.); (N.d.l.T.); (I.A.); (R.S.)
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Sengupta J, Alzbutas R, Falkowski-Gilski P, Falkowska-Gilska B. Intracranial hemorrhage detection in 3D computed tomography images using a bi-directional long short-term memory network-based modified genetic algorithm. Front Neurosci 2023; 17:1200630. [PMID: 37469843 PMCID: PMC10352619 DOI: 10.3389/fnins.2023.1200630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2023] [Accepted: 06/12/2023] [Indexed: 07/21/2023] Open
Abstract
Introduction Intracranial hemorrhage detection in 3D Computed Tomography (CT) brain images has gained more attention in the research community. The major issue to deal with the 3D CT brain images is scarce and hard to obtain the labelled data with better recognition results. Methods To overcome the aforementioned problem, a new model has been implemented in this research manuscript. After acquiring the images from the Radiological Society of North America (RSNA) 2019 database, the region of interest (RoI) was segmented by employing Otsu's thresholding method. Then, feature extraction was performed utilizing Tamura features: directionality, contrast, coarseness, and Gradient Local Ternary Pattern (GLTP) descriptors to extract vectors from the segmented RoI regions. The extracted vectors were dimensionally reduced by proposing a modified genetic algorithm, where the infinite feature selection technique was incorporated with the conventional genetic algorithm to further reduce the redundancy within the regularized vectors. The selected optimal vectors were finally fed to the Bi-directional Long Short Term Memory (Bi-LSTM) network to classify intracranial hemorrhage sub-types, such as subdural, intraparenchymal, subarachnoid, epidural, and intraventricular. Results The experimental investigation demonstrated that the Bi-LSTM based modified genetic algorithm obtained 99.40% sensitivity, 99.80% accuracy, and 99.48% specificity, which are higher compared to the existing machine learning models: Naïve Bayes, Random Forest, Support Vector Machine (SVM), Recurrent Neural Network (RNN), and Long Short-Term Memory (LSTM) network.
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Rajaei F, Cheng S, Williamson CA, Wittrup E, Najarian K. AI-Based Decision Support System for Traumatic Brain Injury: A Survey. Diagnostics (Basel) 2023; 13:diagnostics13091640. [PMID: 37175031 PMCID: PMC10177859 DOI: 10.3390/diagnostics13091640] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Revised: 04/22/2023] [Accepted: 04/29/2023] [Indexed: 05/15/2023] Open
Abstract
Traumatic brain injury (TBI) is one of the major causes of disability and mortality worldwide. Rapid and precise clinical assessment and decision-making are essential to improve the outcome and the resulting complications. Due to the size and complexity of the data analyzed in TBI cases, computer-aided data processing, analysis, and decision support systems could play an important role. However, developing such systems is challenging due to the heterogeneity of symptoms, varying data quality caused by different spatio-temporal resolutions, and the inherent noise associated with image and signal acquisition. The purpose of this article is to review current advances in developing artificial intelligence-based decision support systems for the diagnosis, severity assessment, and long-term prognosis of TBI complications.
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Affiliation(s)
- Flora Rajaei
- Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, USA
| | - Shuyang Cheng
- Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, USA
| | - Craig A Williamson
- Department of Neurosurgery, University of Michigan, Ann Arbor, MI 48109, USA
- Max Harry Weil Institute for Critical Care Research and Innovation, University of Michigan, Ann Arbor, MI 48109, USA
| | - Emily Wittrup
- Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, USA
| | - Kayvan Najarian
- Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, USA
- Max Harry Weil Institute for Critical Care Research and Innovation, University of Michigan, Ann Arbor, MI 48109, USA
- Michigan Institute for Data Science, University of Michigan, Ann Arbor, MI 48109, USA
- Department of Emergency Medicine, University of Michigan, Ann Arbor, MI 48109, USA
- Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, MI 48109, USA
- Center for Data-Driven Drug Development and Treatment Assessment (DATA), University of Michigan, Ann Arbor, MI 48109, USA
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Differentiating malignant and benign eyelid lesions using deep learning. Sci Rep 2023; 13:4103. [PMID: 36914694 PMCID: PMC10011394 DOI: 10.1038/s41598-023-30699-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2022] [Accepted: 02/28/2023] [Indexed: 03/16/2023] Open
Abstract
Artificial intelligence as a screening tool for eyelid lesions will be helpful for early diagnosis of eyelid malignancies and proper decision-making. This study aimed to evaluate the performance of a deep learning model in differentiating eyelid lesions using clinical eyelid photographs in comparison with human ophthalmologists. We included 4954 photographs from 928 patients in this retrospective cross-sectional study. Images were classified into three categories: malignant lesion, benign lesion, and no lesion. Two pre-trained convolutional neural network (CNN) models, DenseNet-161 and EfficientNetV2-M architectures, were fine-tuned to classify images into three or two (malignant versus benign) categories. For a ternary classification, the mean diagnostic accuracies of the CNNs were 82.1% and 83.0% using DenseNet-161 and EfficientNetV2-M, respectively, which were inferior to those of the nine clinicians (87.0-89.5%). For the binary classification, the mean accuracies were 87.5% and 92.5% using DenseNet-161 and EfficientNetV2-M models, which was similar to that of the clinicians (85.8-90.0%). The mean AUC of the two CNN models was 0.908 and 0.950, respectively. Gradient-weighted class activation map successfully highlighted the eyelid tumors on clinical photographs. Deep learning models showed a promising performance in discriminating malignant versus benign eyelid lesions on clinical photographs, reaching the level of human observers.
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11
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Evaluation of grouped capsule network for intracranial hemorrhage segmentation in CT scans. Sci Rep 2023; 13:3440. [PMID: 36859709 PMCID: PMC9977894 DOI: 10.1038/s41598-023-30581-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2022] [Accepted: 02/27/2023] [Indexed: 03/03/2023] Open
Abstract
Intracranial hemorrhage is a cerebral vascular disease with high mortality. Automotive diagnosing and segmentation of intracranial hemorrhage in Computed Tomography (CT) could assist the neurosurgeon in making treatment plans, which improves the survival rate. In this paper, we design a grouped capsule network named GroupCapsNet to segment the hemorrhage region from a Non-contract CT scan. In grouped capsule network, we constrain the prediction capsules for output capsules produced from different groups of input capsules with various types in each layer. This method can reduce the number of intermediate prediction capsules and accelerate the capsule network. In addition, we modify the squashing function to further accelerate the forward procedure without sacrificing its performance. We evaluate our proposed method with a collected dataset containing 210 intracranial hemorrhage CT scan slices. In experiments, our proposed method achieves competitive results in intracranial hemorrhage area segmentation compared to the existing methods.
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12
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Ragab M, Salama R, Alotaibi FS, Abdushkour HA, Alzahrani IR. Political Optimizer With Deep Learning Based Diagnosis for Intracranial Hemorrhage Detection. IEEE ACCESS 2023; 11:71484-71493. [DOI: 10.1109/access.2023.3293754] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2024]
Affiliation(s)
- Mahmoud Ragab
- Information Technology Department, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Reda Salama
- Information Technology Department, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Fahd S. Alotaibi
- Information Systems Department, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Hesham A. Abdushkour
- Nautical Science Department, Faculty of Maritime Studies, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Ibrahim R. Alzahrani
- Computer Science and Engineering Department, College of Computer Science and Engineering, University of Hafr Al Batin, Hafar Al Batin, Saudi Arabia
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13
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Smorchkova AK, Khoruzhaya AN, Kremneva EI, Petryaikin AV. [Machine learning technologies in CT-based diagnostics and classification of intracranial hemorrhages]. ZHURNAL VOPROSY NEIROKHIRURGII IMENI N. N. BURDENKO 2023; 87:85-91. [PMID: 37011333 DOI: 10.17116/neiro20238702185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/05/2023]
Abstract
This review discusses pooled experience of creation, implementation and effectiveness of machine learning technologies in CT-based diagnosis of intracranial hemorrhages. The authors analyzed 21 original articles between 2015 and 2022 using the following keywords: «intracranial hemorrhage», «machine learning», «deep learning», «artificial intelligence». The review contains general data on basic concepts of machine learning and also considers in more detail such aspects as technical characteristics of data sets used for creation of AI algorithms for certain type of clinical task, their possible impact on effectiveness and clinical experience.
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Affiliation(s)
- A K Smorchkova
- Moscow Research Practical Clinical Center for Diagnostics and Telemedicine Technologies, Moscow, Russia
| | - A N Khoruzhaya
- Moscow Research Practical Clinical Center for Diagnostics and Telemedicine Technologies, Moscow, Russia
| | - E I Kremneva
- Moscow Research Practical Clinical Center for Diagnostics and Telemedicine Technologies, Moscow, Russia
- Neurology Research Center, Moscow, Russia
| | - A V Petryaikin
- Moscow Research Practical Clinical Center for Diagnostics and Telemedicine Technologies, Moscow, Russia
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14
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Hibi A, Jaberipour M, Cusimano MD, Bilbily A, Krishnan RG, Aviv RI, Tyrrell PN. Automated identification and quantification of traumatic brain injury from CT scans: Are we there yet? Medicine (Baltimore) 2022; 101:e31848. [PMID: 36451512 PMCID: PMC9704869 DOI: 10.1097/md.0000000000031848] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Accepted: 10/26/2022] [Indexed: 12/02/2022] Open
Abstract
BACKGROUND The purpose of this study was to conduct a systematic review for understanding the availability and limitations of artificial intelligence (AI) approaches that could automatically identify and quantify computed tomography (CT) findings in traumatic brain injury (TBI). METHODS Systematic review, in accordance with PRISMA 2020 and SPIRIT-AI extension guidelines, with a search of 4 databases (Medline, Embase, IEEE Xplore, and Web of Science) was performed to find AI studies that automated the clinical tasks for identifying and quantifying CT findings of TBI-related abnormalities. RESULTS A total of 531 unique publications were reviewed, which resulted in 66 articles that met our inclusion criteria. The following components for identification and quantification regarding TBI were covered and automated by existing AI studies: identification of TBI-related abnormalities; classification of intracranial hemorrhage types; slice-, pixel-, and voxel-level localization of hemorrhage; measurement of midline shift; and measurement of hematoma volume. Automated identification of obliterated basal cisterns was not investigated in the existing AI studies. Most of the AI algorithms were based on deep neural networks that were trained on 2- or 3-dimensional CT imaging datasets. CONCLUSION We identified several important TBI-related CT findings that can be automatically identified and quantified with AI. A combination of these techniques may provide useful tools to enhance reproducibility of TBI identification and quantification by supporting radiologists and clinicians in their TBI assessments and reducing subjective human factors.
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Affiliation(s)
- Atsuhiro Hibi
- Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada
| | - Majid Jaberipour
- Department of Medical Imaging, University of Toronto, Toronto, Ontario, Canada
| | - Michael D. Cusimano
- Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada
- Division of Neurosurgery, St Michael’s Hospital, University of Toronto, Toronto, Canada
| | - Alexander Bilbily
- Department of Medical Imaging, University of Toronto, Toronto, Ontario, Canada
- Sunnybrook Health Sciences Centre, Toronto, Canada
| | - Rahul G. Krishnan
- Department of Computer Science, University of Toronto, Toronto, Ontario, Canada
- Department of Laboratory Medicine & Pathobiology, University of Toronto, Toronto, Ontario, Canada
| | - Richard I. Aviv
- Department of Radiology, Radiation Oncology and Medical Physics, University of Ottawa, Ottawa, Ontario, Canada
| | - Pascal N. Tyrrell
- Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada
- Department of Medical Imaging, University of Toronto, Toronto, Ontario, Canada
- Department of Statistical Sciences, University of Toronto, Toronto, Ontario, Canada
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15
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Huang C, Wang J, Wang SH, Zhang YD. Applicable artificial intelligence for brain disease: A survey. Neurocomputing 2022. [DOI: 10.1016/j.neucom.2022.07.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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16
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Inkeaw P, Angkurawaranon S, Khumrin P, Inmutto N, Traisathit P, Chaijaruwanich J, Angkurawaranon C, Chitapanarux I. Automatic hemorrhage segmentation on head CT scan for traumatic brain injury using 3D deep learning model. Comput Biol Med 2022; 146:105530. [PMID: 35460962 DOI: 10.1016/j.compbiomed.2022.105530] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Revised: 03/18/2022] [Accepted: 04/13/2022] [Indexed: 12/23/2022]
Abstract
The most common cause of long-term disability and death in young adults is a traumatic brain injury. The decision for surgical intervention for craniotomy is dependent on the injury type and the patient's neurologic exam. The potential subtypes of intracranial hemorrhage that may necessitate surgical intervention include subdural hemorrhage, epidural hemorrhage, and intraparenchymal hemorrhage. We proposed a novel automatic method for segmenting the hemorrhage subtypes on a CT scan by integrated CT scan with bone window as input of a deep learning model. Brain CT scans were collected from adult patients and annotated regions of subdural hemorrhage, epidural hemorrhage, and intraparenchymal hemorrhage by neuroradiologists. Their raw DICOM images were preprocessed by two different window settings i.e., subdural and bone windows. The collected CT scans were divided into two datasets namely training and test datasets. A deep-learning model was modified to segment regions of each hemorrhage subtype. The model is a three-dimensional convolutional neural network including four parallel pathways that process the input at different resolutions. It was trained by a training dataset. After the segmentation result was produced by the deep-learning model, it was then improved in the post-processing step. The size of the segmented lesion was considered, and a region-growing algorithm was applied. We evaluated the performance of the proposed method on the test dataset. The method reached the median Dice similarity coefficients higher than 0.37 for each hemorrhage subtype. The proposed method demonstrates higher Dice similarity coefficients and improved segmentation performance compared to previously published literature.
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Affiliation(s)
- Papangkorn Inkeaw
- Data Science Research Center, Department of Computer Science, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
| | - Salita Angkurawaranon
- Department of Radiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, 50200, Thailand.
| | - Piyapong Khumrin
- Department of Family Medicine, Faculty of Medicine, Chiang Mai University, Chiang Mai, 50200, Thailand.
| | - Nakarin Inmutto
- Department of Radiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, 50200, Thailand.
| | - Patrinee Traisathit
- Data Science Research Center, Department of Statistics, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
| | - Jeerayut Chaijaruwanich
- Data Science Research Center, Department of Computer Science, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
| | - Chaisiri Angkurawaranon
- Department of Family Medicine, Faculty of Medicine, Chiang Mai University, Chiang Mai, 50200, Thailand.
| | - Imjai Chitapanarux
- Department of Radiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, 50200, Thailand.
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17
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Yin XX, Sun L, Fu Y, Lu R, Zhang Y. U-Net-Based Medical Image Segmentation. JOURNAL OF HEALTHCARE ENGINEERING 2022; 2022:4189781. [PMID: 35463660 PMCID: PMC9033381 DOI: 10.1155/2022/4189781] [Citation(s) in RCA: 75] [Impact Index Per Article: 25.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/26/2022] [Revised: 03/02/2022] [Accepted: 03/23/2022] [Indexed: 11/17/2022]
Abstract
Deep learning has been extensively applied to segmentation in medical imaging. U-Net proposed in 2015 shows the advantages of accurate segmentation of small targets and its scalable network architecture. With the increasing requirements for the performance of segmentation in medical imaging in recent years, U-Net has been cited academically more than 2500 times. Many scholars have been constantly developing the U-Net architecture. This paper summarizes the medical image segmentation technologies based on the U-Net structure variants concerning their structure, innovation, efficiency, etc.; reviews and categorizes the related methodology; and introduces the loss functions, evaluation parameters, and modules commonly applied to segmentation in medical imaging, which will provide a good reference for the future research.
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Affiliation(s)
- Xiao-Xia Yin
- Cyberspace Institute of Advanced Technology, Guangzhou University, Guangzhou 510006, China
- College of Engineering and Science, Victoria University, Melbourne, VIC 8001, Australia
| | - Le Sun
- Engineering Research Center of Digital Forensics, Ministry of Education, Nanjing University of Information Science and Technology, Nanjing, China
| | - Yuhan Fu
- Cyberspace Institute of Advanced Technology, Guangzhou University, Guangzhou 510006, China
| | - Ruiliang Lu
- Department of Radiology, The First People's Hospital of Foshan, Foshan 528000, China
| | - Yanchun Zhang
- Cyberspace Institute of Advanced Technology, Guangzhou University, Guangzhou 510006, China
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18
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Artificial Intelligence-Enabled Medical Analysis for Intracranial Cerebral Hemorrhage Detection and Classification. JOURNAL OF HEALTHCARE ENGINEERING 2022; 2022:2017223. [PMID: 35356628 PMCID: PMC8959996 DOI: 10.1155/2022/2017223] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Revised: 01/24/2022] [Accepted: 02/02/2022] [Indexed: 12/24/2022]
Abstract
Intracranial hemorrhage (ICH) becomes a crucial healthcare emergency, which requires earlier detection and accurate assessment. Owing to the increased death rate (around 40%), the earlier recognition and classification of disease using computed tomography (CT) images are necessary to ensure a favourable prediction and restrain the existence of neurologic deficits. Since the manual diagnosis approach is time-consuming, automated ICH detection and classification models using artificial intelligence (AI) models are required. With this motivation, this study introduces an AI-enabled medical analysis tool for ICH detection and classification (AIMA-ICHDC) using CT images. The proposed AIMA-ICHDC technique aims at identifying the presence of ICH and identifying the different grades. In addition, the AIMA-ICHDC technique involves the design of glowworm swarm optimization with fuzzy entropy clustering (GSO-FEC) technique for the segmentation process. Besides, the VGG-19 model was executed for generating a collection of feature vectors and the optimal mixed-kernel-based extreme learning machine (OMKELM) model is utilized as a classifier. To optimally select the weight parameter of the MKELM technique, the coyote optimization algorithm (COA) was utilized. A wide range of simulation analyses are carried out under varying aspects. As part of the AIMA-ICHDC method, ICH can be detected and graded using a single sample. For segmentation, the AIMA-ICHDC technique uses the GSO-FEC method, which is the design of glowworm swarm optimization (GSO). The comparative outcomes highlighted the betterment of the AIMA-ICHDC technique compared to the recent state-of-the-art ICH classification approaches in terms of several measures.
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19
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Ge Y, Zhang Q, Sun Y, Shen Y, Wang X. Grayscale medical image segmentation method based on 2D&3D object detection with deep learning. BMC Med Imaging 2022; 22:33. [PMID: 35220942 PMCID: PMC8883636 DOI: 10.1186/s12880-022-00760-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2021] [Accepted: 02/22/2022] [Indexed: 12/22/2022] Open
Abstract
BACKGROUND Grayscale medical image segmentation is the key step in clinical computer-aided diagnosis. Model-driven and data-driven image segmentation methods are widely used for their less computational complexity and more accurate feature extraction. However, model-driven methods like thresholding usually suffer from wrong segmentation and noises regions because different grayscale images have distinct intensity distribution property thus pre-processing is always demanded. While data-driven methods with deep learning like encoder-decoder networks always are always accompanied by complex architectures which require amounts of training data. METHODS Combining thresholding method and deep learning, this paper presents a novel method by using 2D&3D object detection technologies. First, interest regions contain segmented object are determined with fine-tuning 2D object detection network. Then, pixels in cropped images are turned as point cloud according to their positions and grayscale values. Finally, 3D object detection network is applied to obtain bounding boxes with target points and boxes' bottoms and tops represent thresholding values for segmentation. After projecting to 2D images, these target points could composite the segmented object. RESULTS Three groups of grayscale medical images are used to evaluate the proposed image segmentation method. We obtain the IoU (DSC) scores of 0.92 (0.96), 0.88 (0.94) and 0.94 (0.94) for segmentation accuracy on different datasets respectively. Also, compared with five state of the arts and clinically performed well models, our method achieves higher scores and better performance. CONCLUSIONS The prominent segmentation results demonstrate that the built method based on 2D&3D object detection with deep learning is workable and promising for segmentation task of grayscale medical images.
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Affiliation(s)
- Yunfei Ge
- School of Mechanical Engineering, Tongji University, Shanghai, China
| | - Qing Zhang
- School of Mechanical Engineering, Tongji University, Shanghai, China
| | - Yuantao Sun
- School of Mechanical Engineering, Tongji University, Shanghai, China.
| | - Yidong Shen
- Department of Orthopaedics, The First People's Hospital of Yancheng, Yancheng, China
| | - Xijiong Wang
- Shanghai Bojin Electric Instrument and Device Co., Ltd, Shanghai, China
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20
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Alfaer NM, Aljohani HM, Abdel-Khalek S, Alghamdi AS, Mansour RF. Fusion-Based Deep Learning with Nature-Inspired Algorithm for Intracerebral Haemorrhage Diagnosis. JOURNAL OF HEALTHCARE ENGINEERING 2022; 2022:4409336. [PMID: 35087649 PMCID: PMC8789456 DOI: 10.1155/2022/4409336] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Revised: 12/10/2021] [Accepted: 12/14/2021] [Indexed: 12/25/2022]
Abstract
Natural computing refers to computational processes observed in nature and human-designed computing inspired by nature. In recent times, data fusion in the healthcare sector becomes a challenging issue, and it needs to be resolved. At the same time, intracerebral haemorrhage (ICH) is the injury of blood vessels on the brain cells, which is mainly liable for stroke. X-rays and computed tomography (CT) scans are widely applied for locating the haemorrhage position and size. Since manual segmentation of the CT scans by planimetry by the use of radiologists is a time-consuming process, deep learning (DL) is used to attain effective ICH diagnosis performance. This paper presents an automated intracerebral haemorrhage diagnosis using fusion-based deep learning with swarm intelligence (AICH-FDLSI) algorithm. The AICH-FDLSI model operates on four major stages namely preprocessing, image segmentation, feature extraction, and classification. To begin with, the input image is preprocessed using the median filtering (MF) technique to remove the noise present in the image. Next, the seagull optimization algorithm (SOA) with Otsu multilevel thresholding is employed for image segmentation. In addition, the fusion-based feature extraction model using the Capsule Network (CapsNet) and EfficientNet is applied to extract a useful set of features. Moreover, deer hunting optimization (DHO) algorithm is utilized for the hyperparameter optimization of the CapsNet and DenseNet models. Finally, a fuzzy support vector machine (FSVM) is applied as a classification technique to identify the different classes of ICH. A set of simulations takes place to determine the diagnostic performance of the AICH-FDLSI model using the benchmark intracranial haemorrhage data set. The experimental outcome stated that the AICH-FDLSI model has reached a proficient performance over the compared methods in a significant way.
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Affiliation(s)
- Nada M. Alfaer
- Department of Mathematics and Statistics, College of Science, Taif University, Taif 21944, Saudi Arabia
| | - Hassan M. Aljohani
- Department of Mathematics and Statistics, College of Science, Taif University, Taif 21944, Saudi Arabia
| | - Sayed. Abdel-Khalek
- Department of Mathematics and Statistics, College of Science, Taif University, Taif 21944, Saudi Arabia
- Department of Mathematics, Sohag University, Sohag 82524, Egypt
| | - Abdulaziz S. Alghamdi
- Department of Mathematics, College of Science and Arts, King Abdulaziz University, P. O. Box 344, Rabigh 21911, Saudi Arabia
| | - Romany F. Mansour
- Department of Mathematics, New Valley University, El-Kharga 72511, Egypt
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21
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Ragab M, Eljaaly K, Alhakamy NA, Alhadrami HA, Bahaddad AA, Abo-Dahab SM, Khalil EM. Deep Ensemble Model for COVID-19 Diagnosis and Classification Using Chest CT Images. BIOLOGY 2021; 11:43. [PMID: 35053041 PMCID: PMC8773139 DOI: 10.3390/biology11010043] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Revised: 12/09/2021] [Accepted: 12/21/2021] [Indexed: 01/04/2023]
Abstract
Coronavirus disease 2019 (COVID-19) has spread worldwide, and medicinal resources have become inadequate in several regions. Computed tomography (CT) scans are capable of achieving precise and rapid COVID-19 diagnosis compared to the RT-PCR test. At the same time, artificial intelligence (AI) techniques, including machine learning (ML) and deep learning (DL), find it useful to design COVID-19 diagnoses using chest CT scans. In this aspect, this study concentrates on the design of an artificial intelligence-based ensemble model for the detection and classification (AIEM-DC) of COVID-19. The AIEM-DC technique aims to accurately detect and classify the COVID-19 using an ensemble of DL models. In addition, Gaussian filtering (GF)-based preprocessing technique is applied for the removal of noise and improve image quality. Moreover, a shark optimization algorithm (SOA) with an ensemble of DL models, namely recurrent neural networks (RNN), long short-term memory (LSTM), and gated recurrent unit (GRU), is employed for feature extraction. Furthermore, an improved bat algorithm with a multiclass support vector machine (IBA-MSVM) model is applied for the classification of CT scans. The design of the ensemble model with optimal parameter tuning of the MSVM model for COVID-19 classification shows the novelty of the work. The effectiveness of the AIEM-DC technique take place on benchmark CT image data set, and the results reported the promising classification performance of the AIEM-DC technique over the recent state-of-the-art approaches.
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Affiliation(s)
- Mahmoud Ragab
- Information Technology Department, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah 21589, Saudi Arabia
- Centre of Artificial Intelligence for Precision Medicines, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Khalid Eljaaly
- Department of Pharmacy Practice, Faculty of Pharmacy, King Abdulaziz University, Jeddah 21589, Saudi Arabia;
| | - Nabil A. Alhakamy
- Department of Pharmaceutics, Faculty of Pharmacy, King Abdulaziz University, Jeddah 21589, Saudi Arabia;
- Center of Excellence for Drug Research and Pharmaceutical Industries, King Abdulaziz University, Jeddah 21589, Saudi Arabia
- Mohamed Saeed Tamer Chair for Pharmaceutical Industries, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Hani A. Alhadrami
- Department of Medical Laboratory Technology, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah 21589, Saudi Arabia;
- Molecular Diagnostic Lab, King Abdulaziz University Hospital, King Abdulaziz University, Jeddah 21589, Saudi Arabia
- Special Infectious Agent Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Adel A. Bahaddad
- Information Systems Department, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah 21589, Saudi Arabia;
| | - Sayed M. Abo-Dahab
- Mathematics Department, Faculty of Science, South Valley University, Qena 83523, Egypt;
| | - Eied M. Khalil
- Department of Mathematics, Faculty of Science, Al-Azhar University, Cairo 11884, Egypt;
- Department of Mathematics, College of Science, Taif University, Taif 21944, Saudi Arabia
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22
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Phaphuangwittayakul A, Guo Y, Ying F, Dawod AY, Angkurawaranon S, Angkurawaranon C. An optimal deep learning framework for multi-type hemorrhagic lesions detection and quantification in head CT images for traumatic brain injury. APPL INTELL 2021; 52:7320-7338. [PMID: 34764620 PMCID: PMC8475375 DOI: 10.1007/s10489-021-02782-9] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/19/2021] [Indexed: 11/21/2022]
Abstract
Traumatic Brain Injury (TBI) could lead to intracranial hemorrhage (ICH), which has now been identified as a major cause of death after trauma if it is not adequately diagnosed and properly treated within the first 24 hours. CT examination is widely preferred for urgent ICH diagnosis, which enables the fast identification and detection of ICH regions. However, the use of it requires the clinical interpretation by experts to identify the subtypes of ICH. Besides, it is unable to provide the details needed to conduct quantitative assessment, such as the volume and thickness of hemorrhagic lesions, which may have prognostic importance to the decision-making on emergency treatment. In this paper, an optimal deep learning framework is proposed to assist the quantitative assessment for ICH diagnosis and the accurate detection of different subtypes of ICH through head CT scan. Firstly, the format of raw input data is converted from 3D DICOM to NIfTI. Secondly, a pre-trained multi-class semantic segmentation model is applied to each slice of CT images, so as to obtain a precise 3D mask of the whole ICH region. Thirdly, a fine-tuned classification neural network is employed to extract the key features from the raw input data and identify the subtypes of ICH. Finally, a quantitative assessment algorithm is adopted to automatically measure both thickness and volume via the 3D shape mask combined with the output probabilities of the classification network. The results of our extensive experiments demonstrate the effectiveness of the proposed framework where the average accuracy of 96.21 percent is achieved for three types of hemorrhage. The capability of our optimal classification model to distinguish between different types of lesion plays a significant role in reducing the false-positive rate in the existing work. Furthermore, the results suggest that our automatic quantitative assessment algorithm is effective in providing clinically relevant quantification in terms of volume and thickness. It is more important than the qualitative assessment conducted through visual inspection to the decision-making on emergency surgical treatment.
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Affiliation(s)
- Aniwat Phaphuangwittayakul
- Department of Computer Science and Engineering, East China University of Science and Technology, Shanghai, China
| | - Yi Guo
- Department of Computer Science and Engineering, East China University of Science and Technology, Shanghai, China
- National Engineering Laboratory for Big Data Distribution and Exchange Technologies, Shanghai, China
- Shanghai Engineering Research Center of Big Data and Internet Audience, Shanghai, China
| | - Fangli Ying
- Department of Computer Science and Engineering, State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, China
| | - Ahmad Yahya Dawod
- International College of Digital Innovation (ICDI), Chiang Mai University, Chiang Mai, Thailand
| | - Salita Angkurawaranon
- Department of Radiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand
| | - Chaisiri Angkurawaranon
- Department of Family Medicine, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand
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23
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V. V, Gudigar A, Raghavendra U, Hegde A, Menon GR, Molinari F, Ciaccio EJ, Acharya UR. Automated Detection and Screening of Traumatic Brain Injury (TBI) Using Computed Tomography Images: A Comprehensive Review and Future Perspectives. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:6499. [PMID: 34208596 PMCID: PMC8296416 DOI: 10.3390/ijerph18126499] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 06/07/2021] [Accepted: 06/09/2021] [Indexed: 12/17/2022]
Abstract
Traumatic brain injury (TBI) occurs due to the disruption in the normal functioning of the brain by sudden external forces. The primary and secondary injuries due to TBI include intracranial hematoma (ICH), raised intracranial pressure (ICP), and midline shift (MLS), which can result in significant lifetime disabilities and death. Hence, early diagnosis of TBI is crucial to improve patient outcome. Computed tomography (CT) is the preferred modality of choice to assess the severity of TBI. However, manual visualization and inspection of hematoma and its complications from CT scans is a highly operator-dependent and time-consuming task, which can lead to an inappropriate or delayed prognosis. The development of computer aided diagnosis (CAD) systems could be helpful for accurate, early management of TBI. In this paper, a systematic review of prevailing CAD systems for the detection of hematoma, raised ICP, and MLS in non-contrast axial CT brain images is presented. We also suggest future research to enhance the performance of CAD for early and accurate TBI diagnosis.
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Affiliation(s)
- Vidhya V.
- Department of Computer Science and Engineering, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal 576104, India;
| | - Anjan Gudigar
- Department of Instrumentation and Control Engineering, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal 576104, India;
| | - U. Raghavendra
- Department of Instrumentation and Control Engineering, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal 576104, India;
| | - Ajay Hegde
- Institute of Neurological Sciences, Glasgow G51 4LB, UK;
- Department of Neurosurgery, Kasturba Medical College, Manipal Academy of Higher Education, Manipal 576104, India;
| | - Girish R. Menon
- Department of Neurosurgery, Kasturba Medical College, Manipal Academy of Higher Education, Manipal 576104, India;
| | - Filippo Molinari
- Department of Electronics, Politecnico di Torino, 24 Corso Duca degli Abruzzi, 10129 Torino, Italy;
| | - Edward J. Ciaccio
- Department of Medicine, Columbia University, New York, NY 10032, USA;
| | - U. Rajendra Acharya
- School of Engineering, Ngee Ann Polytechnic, 535 Clementi Road, Singapore 599489, Singapore;
- Department of Biomedical Engineering, School of Science and Technology, SUSS University, 463 Clementi Road, Singapore 599491, Singapore
- Department of Bioinformatics and Medical Engineering, Asia University, Taichung 41354, Taiwan
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