1
|
Zhou X, Huang J, Xu S, Cheng H, Liu B, Huang J, Liu J, Pan D, Wu X. Novel Bifunctional Amidase Catalyzing the Degradation of Propanil and Aryloxyphenoxypropionate Herbicides in Rhodococcus sp. C-1. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:18067-18077. [PMID: 39082634 DOI: 10.1021/acs.jafc.4c02268] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/15/2024]
Abstract
Propanil residues can contaminate habitats where microbial degradation is predominant. In this study, an efficient propanil-degrading strain C-1 was isolated from paddy and identified as Rhodococcus sp. It can completely degrade 10 μg/L-150 mg/L propanil within 0.33-10 h via the hydrolysis of the amide bond, forming 3,4-dichloroaniline. A novel bifunctional amidase, PamC, was identified in strain C-1. PamC can catalyze the hydrolysis of the amide bond of propanil to produce 3,4-dichloroaniline as well as the hydrolysis of the ester bonds of aryloxyphenoxypropionate herbicides (APPHs, clodinafop-propargyl, cyhalofop-butyl, fenoxaprop-p-ethyl, fluazifop-p-butyl, haloxyfop-p-methyl, and quizalofop-p-ethyl) to form aryloxyphenoxypropionic acids. Molecular docking and site-directed mutagenesis confirmed that the catalytic triad Lys82-Ser157-Ser181 was the active center for PamC to hydrolyze propanil and cyhalofop-butyl. This study presents a novel bifunctional amidase with capabilities for both amide and ester bond hydrolysis and enhances our understanding of the molecular mechanisms underlying the degradation of propanil and APPHs.
Collapse
Affiliation(s)
- Xiaoyu Zhou
- Anhui Provincial Key Laboratory of Hazardous Factors and Risk Control of Agri-food Quality Safety, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
| | - Jinjin Huang
- Anhui Provincial Key Laboratory of Hazardous Factors and Risk Control of Agri-food Quality Safety, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
| | - Shiwei Xu
- Anhui Provincial Key Laboratory of Hazardous Factors and Risk Control of Agri-food Quality Safety, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
| | - Huan Cheng
- Anhui Provincial Key Laboratory of Hazardous Factors and Risk Control of Agri-food Quality Safety, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
| | - Bin Liu
- College of Life Sciences, Jiangxi Normal University, Nanchang 330022, China
| | - Junwei Huang
- Anhui Provincial Key Laboratory of Hazardous Factors and Risk Control of Agri-food Quality Safety, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
| | - Junwei Liu
- Anhui Provincial Key Laboratory of Hazardous Factors and Risk Control of Agri-food Quality Safety, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
| | - Dandan Pan
- Anhui Provincial Key Laboratory of Hazardous Factors and Risk Control of Agri-food Quality Safety, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
| | - Xiangwei Wu
- Anhui Provincial Key Laboratory of Hazardous Factors and Risk Control of Agri-food Quality Safety, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
| |
Collapse
|
2
|
Pan H, Ma Q, Zhang J, Hu H, Dai H, Shi Y, Lu S, Wang J. Biodegradation of chloroxylenol by an aerobic enrichment consortium and a newly identified Rhodococcus strain. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:21659-21667. [PMID: 38393562 DOI: 10.1007/s11356-024-32365-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Accepted: 02/03/2024] [Indexed: 02/25/2024]
Abstract
Chloroxylenol is a commonly used antimicrobial agent in antibacterial and disinfection products, which has been detected in various environments, such as wastewater treatment plants, rivers, seawater, and even drinking water, with concentrations ranging from ng/L to mg/L. However, the biodegradation of chloroxylenol received limited attention with only sporadic reports available so far. In this study, an efficient chloroxylenol-degrading consortium, which could degrade 20 mg/L chloroxylenol within two days, was obtained after five months of enrichment. Amplicon sequencing analysis revealed a decrease in the α-diversity (e.g., Shannon index and Inv_Simpson index) of the community during the domestication process. Microbial community dynamics were uncovered, with sequences affiliated to Achromobacter, Pseudomonas, and Rhodococcus identified as the most abundant taxonomic groups. From the consortium, five pure isolates were obtained; however, it was found that only one strain of Rhodococcus could degrade chloroxylenol. Strain Rhodococcus sp. DMU2021 could degrade chloroxylenol efficiently under the conditions of temperature 30-40 °C, and neutral/alkaline conditions. Chloroxylenol was toxic to strain DMU2021 and triggered both enzymatic and non-enzymatic antioxidant systems in response. This study provides novel insights into the biodegradation process of chloroxylenol, as well as valuable bioresources for bioremediation.
Collapse
Affiliation(s)
- Hanqing Pan
- Institute of Environmental Systems Biology, College of Environmental Science and Engineering, Dalian Maritime University, Dalian, 116026, China
| | - Qiao Ma
- Institute of Environmental Systems Biology, College of Environmental Science and Engineering, Dalian Maritime University, Dalian, 116026, China.
| | - Jiaxin Zhang
- Institute of Environmental Systems Biology, College of Environmental Science and Engineering, Dalian Maritime University, Dalian, 116026, China
| | - Haodong Hu
- Institute of Environmental Systems Biology, College of Environmental Science and Engineering, Dalian Maritime University, Dalian, 116026, China
| | - Huiyu Dai
- Institute of Environmental Systems Biology, College of Environmental Science and Engineering, Dalian Maritime University, Dalian, 116026, China
| | - Yuyan Shi
- Institute of Environmental Systems Biology, College of Environmental Science and Engineering, Dalian Maritime University, Dalian, 116026, China
| | - Shuxian Lu
- Institute of Environmental Systems Biology, College of Environmental Science and Engineering, Dalian Maritime University, Dalian, 116026, China
| | - Jingwei Wang
- Institute of Environmental Systems Biology, College of Environmental Science and Engineering, Dalian Maritime University, Dalian, 116026, China
| |
Collapse
|
3
|
Das R, Bharadwaj P, Thakur D. Insights into the functional role of Actinomycetia in promoting plant growth and biocontrol in tea (Camellia sinensis) plants. Arch Microbiol 2024; 206:65. [PMID: 38227026 DOI: 10.1007/s00203-023-03789-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Revised: 11/30/2023] [Accepted: 12/08/2023] [Indexed: 01/17/2024]
Abstract
Tea, a highly aromatic and globally consumed beverage, is derived from the aqueous infusion of dried leaves of Camellia sinensis (L.) O. Kuntze. Northeast India, encompassing an expansive geographical area between 24° and 27° N latitude and 88° and 95° E longitude, is a significant tea-producing region covering approximately 312,210 hectares. Despite its prominence, this region faces persistent challenges owing to a conducive climate that harbors the prevalence of pests, fungal pathogens, and weeds, necessitating agrochemicals. Helopeltis theivora, Oligonychus coffeae, and Biston suppressaria are prominent among the tea pests in this region. Concurrently, tea plants encounter fungal infections such as blister blight, brown root rot, and Fusarium dieback. The growing demand for safer tea production and the need to reduce pesticide and fertilizer usage has spurred interest in exploring biological control methods. This review focuses on Actinomycetia, which potentially safeguards plants from diseases and pest infestations by producing many bioactive substances. Actinomycetia, which resides in the tea rhizosphere and internal plant tissues, can produce antagonistic secondary metabolites and extracellular enzymes while promoting plant growth. Harnessing the biocontrol potential of Actinomycetia offers a promising solution to enhance tea production, while minimizing reliance on harmful agrochemicals, contributing to a more environmentally conscious and economically viable tea cultivation system.
Collapse
Affiliation(s)
- Rictika Das
- Microbial Biotechnology Laboratory, Life Sciences Division, Institute of Advanced Study in Science and Technology, Guwahati, Assam, 781035, India
- Department of Molecular Biology and Biotechnology, Cotton University, Guwahati, Assam, 781001, India
| | - Pranami Bharadwaj
- Microbial Biotechnology Laboratory, Life Sciences Division, Institute of Advanced Study in Science and Technology, Guwahati, Assam, 781035, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Debajit Thakur
- Microbial Biotechnology Laboratory, Life Sciences Division, Institute of Advanced Study in Science and Technology, Guwahati, Assam, 781035, India.
| |
Collapse
|
4
|
Ahmad S, Chandrasekaran M, Ahmad HW. Investigation of the Persistence, Toxicological Effects, and Ecological Issues of S-Triazine Herbicides and Their Biodegradation Using Emerging Technologies: A Review. Microorganisms 2023; 11:2558. [PMID: 37894216 PMCID: PMC10609637 DOI: 10.3390/microorganisms11102558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2023] [Revised: 10/09/2023] [Accepted: 10/11/2023] [Indexed: 10/29/2023] Open
Abstract
S-triazines are a group of herbicides that are extensively applied to control broadleaf weeds and grasses in agricultural production. They are mainly taken up through plant roots and are transformed by xylem tissues throughout the plant system. They are highly persistent and have a long half-life in the environment. Due to imprudent use, their toxic residues have enormously increased in the last few years and are frequently detected in food commodities, which causes chronic diseases in humans and mammals. However, for the safety of the environment and the diversity of living organisms, the removal of s-triazine herbicides has received widespread attention. In this review, the degradation of s-triazine herbicides and their intermediates by indigenous microbial species, genes, enzymes, plants, and nanoparticles are systematically investigated. The hydrolytic degradation of substituents on the s-triazine ring is catalyzed by enzymes from the amidohydrolase superfamily and yields cyanuric acid as an intermediate. Cyanuric acid is further metabolized into ammonia and carbon dioxide. Microbial-free cells efficiently degrade s-triazine herbicides in laboratory as well as field trials. Additionally, the combinatorial approach of nanomaterials with indigenous microbes has vast potential and considered sustainable for removing toxic residues in the agroecosystem. Due to their smaller size and unique properties, they are equally distributed in sediments, soil, water bodies, and even small crevices. Finally, this paper highlights the implementation of bioinformatics and molecular tools, which provide a myriad of new methods to monitor the biodegradation of s-triazine herbicides and help to identify the diverse number of microbial communities that actively participate in the biodegradation process.
Collapse
Affiliation(s)
- Sajjad Ahmad
- Environmental Sustainability & Health Institute (ESHI), City Campus, School of Food Science & Environmental Health, Technological University Dublin, Grangegorman Lower, D07 EWV4 Dublin, Ireland
- Key Laboratory of Integrated Pest Management of Crop in South China, Key Laboratory of Natural Pesticide and Chemical Biology, Ministry of Agriculture and Rural Affairs, Ministry of Education, South China Agricultural University, Guangzhou 510642, China
- Department of Entomology, Faculty of Agriculture, University of Agriculture, Faisalabad 38000, Pakistan
| | - Murugesan Chandrasekaran
- Department of Food Science and Biotechnology, Sejong University, Neungdong-ro 209, Seoul 05006, Republic of Korea;
| | - Hafiz Waqas Ahmad
- Department of Food Engineering, Faculty of Agricultural Engineering & Technology, University of Agriculture, Faisalabad 38000, Pakistan;
| |
Collapse
|
5
|
Engelhart-Straub S, Haack M, Awad D, Brueck T, Mehlmer N. Optimization of Rhodococcus erythropolis JCM3201 T Nutrient Media to Improve Biomass, Lipid, and Carotenoid Yield Using Response Surface Methodology. Microorganisms 2023; 11:2147. [PMID: 37763991 PMCID: PMC10534354 DOI: 10.3390/microorganisms11092147] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Revised: 08/17/2023] [Accepted: 08/21/2023] [Indexed: 09/29/2023] Open
Abstract
The oleaginous bacterium Rhodococcus erythropolis JCM3201T offers various unique enzyme capabilities, and it is a potential producer of industrially relevant compounds, such as triacylglycerol and carotenoids. To develop this strain into an efficient production platform, the characterization of the strain's nutritional requirement is necessary. In this work, we investigate its substrate adaptability. Therefore, the strain was cultivated using nine nitrogen and eight carbon sources at a carbon (16 g L-1) and nitrogen (0.16 g L-1) weight ratio of 100:1. The highest biomass accumulation (3.1 ± 0.14 g L-1) was achieved using glucose and ammonium acetate. The highest lipid yield (156.7 ± 23.0 mg g-1DCW) was achieved using glucose and yeast extract after 192 h. In order to enhance the dependent variables: biomass, lipid and carotenoid accumulation after 192 h, for the first time, a central composite design was employed to determine optimal nitrogen and carbon concentrations. Nine different concentrations were tested. The center point was tested in five biological replicates, while all other concentrations were tested in duplicates. While the highest biomass (8.00 ± 0.27 g L-1) was reached at C:N of 18.87 (11 g L-1 carbon, 0.583 g L-1 nitrogen), the highest lipid yield (100.5 ± 4.3 mg g-1DCW) was determined using a medium with 11 g L-1 of carbon and only 0.017 g L-1 of nitrogen. The highest carotenoid yield (0.021 ± 0.001 Abs454nm mg-1DCW) was achieved at a C:N of 12 (6 g L-1 carbon, 0.5 g L-1 nitrogen). The presented results provide new insights into the physiology of R. erythropolis under variable nutritional states, enabling the selection of an optimized media composition for the production of valuable oleochemicals or pigments, such as rare odd-chain fatty acids and monocyclic carotenoids.
Collapse
Affiliation(s)
| | | | | | - Thomas Brueck
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, TUM School of Natural Sciences, Technical University of Munich, 85748 Garching, Germany
| | - Norbert Mehlmer
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, TUM School of Natural Sciences, Technical University of Munich, 85748 Garching, Germany
| |
Collapse
|
6
|
Behera S, Das S. Potential and prospects of Actinobacteria in the bioremediation of environmental pollutants: Cellular mechanisms and genetic regulations. Microbiol Res 2023; 273:127399. [PMID: 37150049 DOI: 10.1016/j.micres.2023.127399] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 04/22/2023] [Accepted: 04/30/2023] [Indexed: 05/09/2023]
Abstract
Increasing industrialization and anthropogenic activities have resulted in the release of a wide variety of pollutants into the environment including pesticides, polycyclic aromatic hydrocarbons (PAHs), and heavy metals. These pollutants pose a serious threat to human health as well as to the ecosystem. Thus, the removal of these compounds from the environment is highly important. Mitigation of the environmental pollution caused by these pollutants via bioremediation has become a promising approach nowadays. Actinobacteria are a group of eubacteria mostly known for their ability to produce secondary metabolites. The morphological features such as spore formation, filamentous growth, higher surface area to volume ratio, and cellular mechanisms like EPS secretion, and siderophore production in Actinobacteria render higher resistance and biodegradation ability. In addition, these bacteria possess several oxidoreductase systems (oxyR, catR, furA, etc.) which help in bioremediation. Actinobacteria genera including Arthrobacter, Rhodococcus, Streptomyces, Nocardia, Microbacterium, etc. have shown great potential for the bioremediation of various pollutants. In this review, the bioremediation ability of these bacteria has been discussed in detail. The utilization of various genera of Actinobacteria for the biodegradation of organic pollutants, including pesticides and PAHs, and inorganic pollutants like heavy metals has been described. In addition, the cellular mechanisms in these microbes which help to withstand oxidative stress have been discussed. Finally, this review explores the Actinobacteria mediated strategies and recent technologies such as the utilization of mixed cultures, cell immobilization, plant-microbe interaction, utilization of biosurfactants and nanoparticles, etc., to enhance the bioremediation of various environmental pollutants.
Collapse
Affiliation(s)
- Shivananda Behera
- Laboratory of Environmental Microbiology and Ecology (LEnME), Department of Life Science, National Institute of Technology, Rourkela 769 008, Odisha, India
| | - Surajit Das
- Laboratory of Environmental Microbiology and Ecology (LEnME), Department of Life Science, National Institute of Technology, Rourkela 769 008, Odisha, India.
| |
Collapse
|
7
|
Zhang F, Sun S, Rong Y, Mao L, Yang S, Qian L, Li R, Zheng Y. Enhanced phytoremediation of atrazine-contaminated soil by vetiver (Chrysopogon zizanioides L.) and associated bacteria. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:44415-44429. [PMID: 36690855 DOI: 10.1007/s11356-023-25395-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2022] [Accepted: 01/14/2023] [Indexed: 06/17/2023]
Abstract
The intensive and long-term use of atrazine (ATZ) has led to the contamination of agricultural soils and non-target organisms, posing a series of threats to human health through the transmission of the food chain. In this study, a 60-day greenhouse pot experiment was carried out to explore the phytoremediation by Chrysopogon zizanioides L. (vetiver). The uptake, accumulation, distribution, and removal of ATZ were investigated, and the degradation mechanisms were elucidated. The results showed that the growth of vetiver was inhibited in the first 10 days of the incubation; subsequently, the plant recovered rapidly with time going. Vetiver grass was capable of taking up ATZ from the soil, with root concentration factor ranging from 2.36 to 15.55, and translocating to the shoots, with shoot concentration factor ranging from 7.51 to 17.52. The dissipation of ATZ in the rhizosphere soil (97.51%) was significantly higher than that in the vetiver-unplanted soil (85.14%) at day 60. Metabolites were identified as hydroxyatrazine (HA), deethylatrazine (DEA), deisopropylatrazine (DIA), and didealkylatrazine (DDA) in the samples of the shoots and roots of vetiver as well as the soils treated with ATZ. HA, DEA, DIA, and DDA were reported first time as metabolites of ATZ in shoots and roots of vetiver grown in soil. The presence of vetiver changed the formation and distribution of the dealkylated products in the rhizosphere soil, which remarkably enhanced the occurrence of DEA, DIA, and DDA. Arthrobacter, Bradyrhizobium, Nocardioides, and Rhodococcus were the major atrazine-degrading bacterial genera, which might be responsible for ATZ degradation in the rhizosphere soil. Our findings suggested that vetiver grass can significantly promote ATZ degradation in the soil, and it could be a strategy for remediation of the atrazine-contaminated agricultural soil.
Collapse
Affiliation(s)
- Faming Zhang
- Faculty of Plant Protection, Yunnan Agricultural University, Kunming, 650201, People's Republic of China
| | - Shixian Sun
- Yunnan Key Laboratory of Plateau Wetland Conservation, Restoration and Ecological Services, Kunming, 650224, People's Republic of China
- National Plateau Wetlands Research Center, Southwest Forestry University, Kunming, 650224, People's Republic of China
| | - Yuhong Rong
- Faculty of Landscape Architecture and Horticulture Sciences, Southwest Forestry University, Kunming, 650224, People's Republic of China
| | - Lili Mao
- Faculty of Plant Protection, Yunnan Agricultural University, Kunming, 650201, People's Republic of China
| | - Shuchun Yang
- Faculty of Resource and Environment, Yunnan Agricultural University, Kunming, 650201, People's Republic of China
| | - Ling Qian
- Faculty of Plant Protection, Yunnan Agricultural University, Kunming, 650201, People's Republic of China
| | - Rongbiao Li
- Faculty of Resource and Environment, Yunnan Agricultural University, Kunming, 650201, People's Republic of China
| | - Yi Zheng
- Faculty of Plant Protection, Yunnan Agricultural University, Kunming, 650201, People's Republic of China.
- Department of President Office, Yunnan Open University, Kunming, 650500, People's Republic of China.
| |
Collapse
|
8
|
Pan Z, Wu Y, Zhai Q, Tang Y, Liu X, Xu X, Liang S, Zhang H. Immobilization of bacterial mixture of Klebsiella variicola FH-1 and Arthrobacter sp. NJ-1 enhances the bioremediation of atrazine-polluted soil environments. Front Microbiol 2023; 14:1056264. [PMID: 36819060 PMCID: PMC9937183 DOI: 10.3389/fmicb.2023.1056264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 01/19/2023] [Indexed: 02/05/2023] Open
Abstract
In this study, the effects of the immobilized bacterial mixture (IM-FN) of Arthrobacter sp. NJ-1 and Klebsiella variicola strain FH-1 using sodium alginate-CaCl2 on the degradation of atrazine were investigated. The results showed that the optimal ratio of three types of carrier materials (i.e., rice straw powder, rice husk, and wheat bran) was 1:1:1 with the highest adsorption capacity for atrazine (i.e., 3774.47 mg/kg) obtained at 30°C. On day 9, the degradation efficiency of atrazine (50 mg/L) reached 98.23% with cell concentration of 1.6 × 108 cfu/ml at pH 9 and 30°C. The Box-Behnken method was used to further optimize the culture conditions for the degradation of atrazine by the immobilized bacterial mixture. The IM-FN could be reused for 2-3 times with the degradation efficiency of atrazine maintained at 73.0% after being stored for 80 days at 25°C. The population dynamics of IM-FN was explored with the total soil DNA samples specifically analyzed by real-time PCR. In 7 days, the copy numbers of both PydC and estD genes in the IM-FN were significantly higher than those of bacterial suspensions in the soil. Compared with bacterial suspensions, the IM-FN significantly accelerated the degradation of atrazine (20 mg/kg) in soil with the half-life shortened from 19.80 to 7.96 days. The plant heights of two atrazine-sensitive crops (wheat and soybean) were increased by 14.99 and 64.74%, respectively, in the soil restored by immobilized bacterial mixture, indicating that the IM-FN significantly reduced the phytotoxicity of atrazine on the plants. Our study evidently demonstrated that the IM-FN could significantly increase the degradation of atrazine, providing a potentially effective bioremediation technique for the treatment of atrazine-polluted soil environment and providing experimental support for the wide application of immobilized microorganism technology in agriculture.
Collapse
Affiliation(s)
- Zequn Pan
- College of Plant Protection, Jilin Agricultural University, Changchun, China
| | - Yulin Wu
- College of Plant Protection, Jilin Agricultural University, Changchun, China
| | - Qianhang Zhai
- College of Plant Protection, Jilin Agricultural University, Changchun, China
| | - Yanan Tang
- College of Plant Protection, Jilin Agricultural University, Changchun, China
| | - Xuewei Liu
- College of Plant Protection, Jilin Agricultural University, Changchun, China
| | - Xuanwei Xu
- Ginseng and Antler Products Testing Center of the Ministry of Agricultural PRC, Jilin Agricultural University, Changchun, China
| | - Shuang Liang
- College of Plant Protection, Jilin Agricultural University, Changchun, China
| | - Hao Zhang
- College of Plant Protection, Jilin Agricultural University, Changchun, China
| |
Collapse
|
9
|
Carvalho LB, Abreu Venceslau ADF, Breisch DLA, Fraceto LF, Jaime C, Pinto LMA. Heterocyclic agrochemical hosted by cyclodextrin and hybrid cyclodextrin-silica materials: characterization, release behavior, and mobility in soil. Colloids Surf A Physicochem Eng Asp 2022. [DOI: 10.1016/j.colsurfa.2022.130470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
|
10
|
Joshi P, Mehtab S, Zaidi M. Electroanalysis of Simazine Release from Supercritically Derived Nanoferrogels over Polypyrrole/Graphene Oxide Electrodes. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2022. [DOI: 10.1246/bcsj.20220029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Pragati Joshi
- Department of Chemistry, College of Basic Sciences and Humanities, G.B. Pant University of Agriculture and Technology, Pantnagar, U.S Nagar-263145, Uttarakhand, India
| | - Sameena Mehtab
- Department of Chemistry, College of Basic Sciences and Humanities, G.B. Pant University of Agriculture and Technology, Pantnagar, U.S Nagar-263145, Uttarakhand, India
| | - M.G.H. Zaidi
- Department of Chemistry, College of Basic Sciences and Humanities, G.B. Pant University of Agriculture and Technology, Pantnagar, U.S Nagar-263145, Uttarakhand, India
| |
Collapse
|
11
|
Anwar S, Wahla AQ, Ali T, Khaliq S, Imran A, Tawab A, Afzal M, Iqbal S. Biodegradation and Subsequent Toxicity Reduction of Co-contaminants Tribenuron Methyl and Metsulfuron Methyl by a Bacterial Consortium B2R. ACS OMEGA 2022; 7:19816-19827. [PMID: 35721981 PMCID: PMC9202245 DOI: 10.1021/acsomega.2c01583] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Accepted: 05/11/2022] [Indexed: 06/15/2023]
Abstract
AllyMax is a widely used herbicide formulation in wheat-rice cropping areas of the world. The residues of its active ingredients, tribenuron methyl (TBM) and metsulfuron methyl (MET), persist in soil and water as co-contaminants, and cause serious threats to nontarget organisms. This study was performed to assess the potential of a bacterial consortium for the degradation and detoxification of TBM and MET individually and as co-contaminants. A bacterial consortium (B2R), comprising Bacillus cereus SU-1, Bacillus velezensis OS-2, and Rhodococcus rhodochrous AQ1, capable of degrading TBM and MET in liquid cultures was developed. Biodegradation of TBM and MET was optimized using the Taguchi design of experiment. Optimum degradation of both TBM and MET was obtained at pH 7 and 37 °C. Regarding media composition, optimum degradation of TBM and MET was obtained in minimal salt medium (MSM) supplemented with glucose, and MSM without glucose, respectively. The consortium simultaneously degraded TBM and MET (94.8 and 80.4%, respectively) in cultures containing the formulation AllyMax, where TBM and MET existed as co-contaminants at 2.5 mg/L each. Mass spectrometry analysis confirmed that during biodegradation, TBM and MET were metabolized into simpler compounds. Onion (Allium cepa) root inhibition and Comet assays revealed that the bacterial consortium B2R detoxified TBM and MET separately and as co-contaminants. The consortium B2R can potentially be used for the remediation of soil and water co-contaminated with TBM and MET.
Collapse
Affiliation(s)
- Samina Anwar
- Soil
& Environmental Biotechnology Division, National Institute for Biotechnology and Genetic Engineering College,
Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| | - Abdul Qadeer Wahla
- Soil
& Environmental Biotechnology Division, National Institute for Biotechnology and Genetic Engineering College,
Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| | - Tayyaba Ali
- Department
of Zoology, Government College University, Allama Iqbal Road, Faisalabad 38000, Pakistan
| | - Shazia Khaliq
- Industrial
Biotechnology Division, National Institute
for Biotechnology and Genetic Engineering College, Pakistan Institute
of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| | - Asma Imran
- Soil
& Environmental Biotechnology Division, National Institute for Biotechnology and Genetic Engineering College,
Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| | - Abdul Tawab
- Health
Biotechnology Division, National Institute
for Biotechnology and Genetic Engineering College, Pakistan Institute
of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| | - Muhammad Afzal
- Soil
& Environmental Biotechnology Division, National Institute for Biotechnology and Genetic Engineering College,
Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| | - Samina Iqbal
- Soil
& Environmental Biotechnology Division, National Institute for Biotechnology and Genetic Engineering College,
Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| |
Collapse
|
12
|
Farda B, Djebaili R, Vaccarelli I, Del Gallo M, Pellegrini M. Actinomycetes from Caves: An Overview of Their Diversity, Biotechnological Properties, and Insights for Their Use in Soil Environments. Microorganisms 2022; 10:453. [PMID: 35208907 PMCID: PMC8875103 DOI: 10.3390/microorganisms10020453] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2022] [Revised: 02/11/2022] [Accepted: 02/14/2022] [Indexed: 12/21/2022] Open
Abstract
The environmental conditions of caves shape microbiota. Within caves' microbial communities, actinomycetes are among the most abundant bacteria. Cave actinomycetes have gained increasing attention during the last decades due to novel bioactive compounds with antibacterial, antioxidant and anticancer activities. However, their potential role in soil environments is still unknown. This review summarises the literature dealing with actinomycetes from caves, underlining for the first time their potential roles in soil environments. We provide an overview of their diversity and biotechnological properties, underling their potential role in soil environments applications. The contribution of caves' actinomycetes in soil fertility and bioremediation and crops biostimulation and biocontrol are discussed. The survey on the literature show that several actinomycetes genera are present in cave ecosystems, mainly Streptomyces, Micromonospora, and Nocardiopsis. Among caves' actinomycetes, Streptomyces is the most studied genus due to its ubiquity, survival capabilities, and metabolic versatility. Despite actinomycetes' outstanding capabilities and versatility, we still have inadequate information regarding cave actinomycetes distribution, population dynamics, biogeochemical processes, and metabolisms. Research on cave actinomycetes needs to be encouraged, especially concerning environmental soil applications to improve soil fertility and health and to antagonise phytopathogens.
Collapse
Affiliation(s)
| | - Rihab Djebaili
- Department of Life, Health and Environmental Sciences, University of L’Aquila, Via Vetoio, Coppito, 67100 L’Aquila, Italy; (B.F.); (I.V.); (M.D.G.)
| | | | | | - Marika Pellegrini
- Department of Life, Health and Environmental Sciences, University of L’Aquila, Via Vetoio, Coppito, 67100 L’Aquila, Italy; (B.F.); (I.V.); (M.D.G.)
| |
Collapse
|
13
|
Mawang CI, Azman AS, Fuad ASM, Ahamad M. Actinobacteria: An eco-friendly and promising technology for the bioaugmentation of contaminants. BIOTECHNOLOGY REPORTS (AMSTERDAM, NETHERLANDS) 2021; 32:e00679. [PMID: 34660214 PMCID: PMC8503819 DOI: 10.1016/j.btre.2021.e00679] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Revised: 08/05/2021] [Accepted: 09/20/2021] [Indexed: 11/17/2022]
Abstract
Over the past two decades, various eco-friendly approaches utilizing microbial species to clean up contaminated environments have surfaced. In this aspect, actinobacteria have demonstrated their potential in contaminant degradation. The members of actinobacteria phylum exhibits a cosmopolitan distribution, which means that they can be found widely in both aquatic and terrestrial ecosystems. Actinobacteria play important ecological roles in the environment, such as degrading complex polymers, recycling compounds, and producing bioactive molecules. Hence, using actinobacteria to clean up contaminants is an attractive method in the field of biotechnology. This can be achieved through the green technology of bioaugmentation, whereby the degradative capacity of contaminated areas can be greatly improved through the introduction of specific microorganisms. This review describes actinobacteria as an eco-friendly and a promising technology for the bioaugmentation of contaminants, with focus on pesticides and heavy metals.
Collapse
Affiliation(s)
- Christina-Injan Mawang
- Acarology Unit, Infectious Disease Research Centre, Institute for Medical Research, Ministry of Health Malaysia, National Institutes of Health Complex, Setia Alam, Shah Alam, Selangor, 40170, Malaysia
| | - Adzzie-Shazleen Azman
- School of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor, 47500, Malaysia
| | - Aalina-Sakiinah Mohd Fuad
- Department of Biomedical Science, Kulliyyah of Allied Health Sciences, International Islamic University Malaysia Kuantan Campus, Jalan Sultan Ahmad Shah, Bandar Indera Mahkota, Kuantan, Pahang 25200, Malaysia
| | - Mariana Ahamad
- Acarology Unit, Infectious Disease Research Centre, Institute for Medical Research, Ministry of Health Malaysia, National Institutes of Health Complex, Setia Alam, Shah Alam, Selangor, 40170, Malaysia
| |
Collapse
|
14
|
Abd Rani NF, Ahmad Kamil K, Aris F, Mohamed Yunus N, Zakaria NA. Atrazine-degrading bacteria for bioremediation strategy: A review. BIOCATAL BIOTRANSFOR 2021. [DOI: 10.1080/10242422.2021.2000967] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Nur Fauziah Abd Rani
- Faculty of Applied Sciences, Universiti Teknologi MARA (UiTM), Shah Alam, Selangor, Malaysia
| | | | - Farizan Aris
- Faculty of Applied Sciences, Universiti Teknologi MARA (UiTM), Shah Alam, Selangor, Malaysia
| | | | - Nurul Aili Zakaria
- Faculty of Applied Sciences, Universiti Teknologi MARA (UiTM), Shah Alam, Selangor, Malaysia
| |
Collapse
|
15
|
Niu B, Cai J, Song W, Zhao G. Intermediate accumulation and toxicity reduction during the selective photoelectrochemical process of atrazine in complex water bodies. WATER RESEARCH 2021; 205:117663. [PMID: 34555742 DOI: 10.1016/j.watres.2021.117663] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Revised: 09/08/2021] [Accepted: 09/09/2021] [Indexed: 06/13/2023]
Abstract
Selective removal of atrazine (ATZ) in wastewater and clarification of the degradation intermediate-toxicity correlation are of great importance. A newly molecularly imprinted, {001} facets-exposed TiO2 (MI-TiO2,001) photoanode with strong catalytic and selective ability was designed. ATZ was selectively removed from pesticide wastewater, reaching 1.9 µg L-1, approximately 1/10 of the concentration achieved with nonselective treatment. This selective removal originated from the preferential adsorption and enrichment of ATZ onto MI-TiO2,001. The highly specific recognition relied on the halogen bond and strong hydrogen bond formed between the Cl atom and triazine ring π orbital of ATZ and the surface -OH group of MI-TiO2,001 as well as the recognition of MI-TiO2,001 to the shape and size of ATZ. The specific interaction leads to different accumulations of intermediates. The correlation of intermediate and toxicity was also discussed. Aquatic toxicity was rapidly reduced through the direct dealkylation path, and due to the accumulation of highly toxic 2‑hydroxy-4-ethylamino-6-isopropylamino-s-triazine, there will be transient fluctuations via the dechlorination-hydroxylation path first. The final product was identified as nearly nontoxic cyanuric acid, the selective accumulation of which indicated that there was almost 100% removal of aquatic toxicity and cytotoxicity with only 9.8% removal of total organic carbon. This work provides new insight into the correlation of pollutant degradation intermediates and changes in toxicity.
Collapse
Affiliation(s)
- Baoling Niu
- School of Chemical Science and Engineering, Shanghai Key Lab of Chemical Assessment and Sustainability, Tongji University, Shanghai 200092, China
| | - Junzhuo Cai
- School of Chemical Science and Engineering, Shanghai Key Lab of Chemical Assessment and Sustainability, Tongji University, Shanghai 200092, China
| | - Wenjing Song
- Key Laboratory of Photochemistry, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China; School of Chemical Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Guohua Zhao
- School of Chemical Science and Engineering, Shanghai Key Lab of Chemical Assessment and Sustainability, Tongji University, Shanghai 200092, China.
| |
Collapse
|
16
|
James A, Singh DK. Atrazine detoxification by intracellular crude enzyme extracts derived from epiphytic root bacteria associated with emergent hydrophytes. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART. B, PESTICIDES, FOOD CONTAMINANTS, AND AGRICULTURAL WASTES 2021; 56:577-586. [PMID: 33999766 DOI: 10.1080/03601234.2021.1922043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The present study demonstrated atrazine detoxification by intracellular crude enzyme extracts of Pseudomonas spp. strains ACB and TLB. Indigenous bacterial protein-based remediation techniques could be an alternative to bioaugmentation which pose multiple challenges when applied to the field. Intracellular enzymes were extracted from strains ACB and TLB and their degradation potential of 10 mg L-1 was determined using Gas Chromatography; further, enzyme extracts were subjected to protein profiling studies. In span of 6 h, enzyme extracts of strain ACB showed maximum degradation at 30 °C and 40 °C (71%) and enzyme extracts of strain TLB showed maximum degradation at 40 °C (48%). Atrazine degradation by enzyme extracts of strain ACB showed maximum degradation at pH 7 (71%) and pH 6 (69%) in 6 h. Similarly, enzyme extracts of strain TLB showed maximal degradation at pH 6 (46%) in 6 h. The present study demonstrated, for the first time, efficient atrazine remediation by intracellular crude enzyme extracts from epiphytic root bacteria at a range of temperature and pH conditions. Protein profiling studies indicated that atrazine induced expression of CoA ester lyase and alkyl hydroperoxide reductase in the strains ACB and TLB respectively. Expressions of these proteins have never been associated with atrazine exposure.
Collapse
Affiliation(s)
- Anina James
- Department of Zoology, University of Delhi, Delhi, India
| | | |
Collapse
|
17
|
Cao D, He S, Li X, Shi L, Wang F, Yu S, Xu S, Ju C, Fang H, Yu Y. Characterization, genome functional analysis, and detoxification of atrazine by Arthrobacter sp. C2. CHEMOSPHERE 2021; 264:128514. [PMID: 33045503 DOI: 10.1016/j.chemosphere.2020.128514] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 09/23/2020] [Accepted: 09/29/2020] [Indexed: 06/11/2023]
Abstract
Residual injury of atrazine to the succeeding crops has been frequently reported. It is necessary to find a solution for the detoxification of atrazine contaminated soil. A high-efficient bacterial strain Arthrobacter sp. C2 for atrazine degradation was isolated in this study. The genomic information of the isolate C2, and its degradation characteristics and potential application in detoxification of atrazine contaminated soil were investigated. The results indicated that the isolate C2 genome contained 4,305,216 bp nucleotides, three plasmids, and 4705 coding genes. The degradation rates of atrazine at levels of 1, 10, 100 mg/L by the isolate C2 were 0.34, 1.94, 18.64 mg/L/d, respectively. The optimum temperature and pH for the isolate C2 to degrade atrazine were 30 °C and 7.0-9.0. Based on the metabolites detected by UPLC-TOF-MS/MS and genome annotation of the isolate C2, a common metabolic pathway of atrazine was proposed as that atrazine is firstly dechlorinated into hydroxyatrazine, and subsequently to N-isopropylammelide via dealkylation, and ultimately deaminated to cyanuric acid. Introduction of the isolate C2 into soil can enhance degradation of atrazine and thus eliminate the toxic effect of this herbicide on wheat growth. Our results indicate that the strain C2 could be a potential bioresource for bioremediation of atrazine contaminated soil.
Collapse
Affiliation(s)
- Duantao Cao
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China; Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Hangzhou, 310058, China; Key Laboratory of Molecular Biology of Crop Pathogens and Insects of Zhejiang Province, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Shuhong He
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China; Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Hangzhou, 310058, China
| | - Xin Li
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China; Key Laboratory of Molecular Biology of Crop Pathogens and Insects of Zhejiang Province, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Lihong Shi
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China
| | - Feiyan Wang
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China
| | - Sumei Yu
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China
| | - Shiji Xu
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China; Key Laboratory of Molecular Biology of Crop Pathogens and Insects of Zhejiang Province, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Chao Ju
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China
| | - Hua Fang
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China; Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Hangzhou, 310058, China; Key Laboratory of Molecular Biology of Crop Pathogens and Insects of Zhejiang Province, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Yunlong Yu
- Institute of Pesticide and Environmental Toxicology, Hangzhou, 310058, China; Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Hangzhou, 310058, China; Key Laboratory of Molecular Biology of Crop Pathogens and Insects of Zhejiang Province, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China.
| |
Collapse
|
18
|
Forini MML, Antunes DR, Cavalcante LAF, Pontes MS, Biscalchim ÉR, Sanches AO, Santiago EF, Fraceto LF, Grillo R. Fabrication and Characterization of a Novel Herbicide Delivery System with Magnetic Collectability and Its Phytotoxic Effect on Photosystem II of Aquatic Macrophyte. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:11105-11113. [PMID: 32915575 DOI: 10.1021/acs.jafc.0c03645] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
The use of nano- and microparticles as a release system for agrochemicals has been increasing in agricultural sector. However, the production of eco-friendly and smart carriers that can be easily handled in the environment is still a challenge for this technology. In this context, we have developed a biodegradable release system for the herbicide atrazine with magnetic properties. Herein, we investigated the (a) physicochemical properties of the atrazine-loaded magnetic poly(ε-caprolactone) microparticles (MPs:ATZ), (b) in vitro release kinetic profile of the herbicide, and (c) phytotoxicity toward photosynthesis in the aquatic fern Azolla caroliniana. The encapsulation efficiency of the herbicide in the MPs:ATZ was ca. 69%, yielding spherical microparticles with a diameter of ca. 100 μm, a sustained-release profile, and easily manipulated with an external magnetic field. Also, phytotoxicity issues showed that the MPs:ATZ maintained their herbicidal activity via inhibition of PSII, showing lower toxicity compared with the nonencapsulated ATZ at 0.01 and 0.02 μmol·L-1. Therefore, this technology may conveniently promote a novel magnetic controlled release of the herbicide ATZ (with the potential to be collected from a watercourse) and act as a nutrient boost to the nontarget plant, with good herbicidal activity and reduced risk to the environment.
Collapse
Affiliation(s)
- Mariana M L Forini
- Department of Physics and Chemistry, School of Engineering, São Paulo State University (UNESP), Ilha Solteira, SP 15385-000, Brazil
| | - Débora R Antunes
- Department of Physics and Chemistry, School of Engineering, São Paulo State University (UNESP), Ilha Solteira, SP 15385-000, Brazil
| | - Luiz A F Cavalcante
- Department of Physics and Chemistry, School of Engineering, São Paulo State University (UNESP), Ilha Solteira, SP 15385-000, Brazil
| | - Montcharles S Pontes
- Natural Resources Program, Center for Natural Resources Studies (CERNA), Mato Grosso do Sul State University (UEMS), Dourados, Mato Grosso do Sul 79804-970, Brazil
| | - Érica R Biscalchim
- Department of Physics and Chemistry, School of Engineering, São Paulo State University (UNESP), Ilha Solteira, SP 15385-000, Brazil
| | - Alex O Sanches
- Department of Physics and Chemistry, School of Engineering, São Paulo State University (UNESP), Ilha Solteira, SP 15385-000, Brazil
| | - Etenaldo F Santiago
- Natural Resources Program, Center for Natural Resources Studies (CERNA), Mato Grosso do Sul State University (UEMS), Dourados, Mato Grosso do Sul 79804-970, Brazil
| | - Leonardo F Fraceto
- Department of Environmental Engineering, Institute of Science and Technology (ICTS), São Paulo State University (UNESP), Sorocaba, SP 18087-180, Brazil
| | - Renato Grillo
- Department of Physics and Chemistry, School of Engineering, São Paulo State University (UNESP), Ilha Solteira, SP 15385-000, Brazil
| |
Collapse
|
19
|
Gao N, Zhang J, Pan Z, Zhao X, Ma X, Zhang H. Biodegradation of Atrazine by Mixed Bacteria of Klebsiella variicola Strain FH-1 and Arthrobacter sp. NJ-1. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2020; 105:481-489. [PMID: 32914331 DOI: 10.1007/s00128-020-02966-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Accepted: 08/13/2020] [Indexed: 06/11/2023]
Abstract
The purpose of this study is to enhance the biodegradability of atrazine with FH-1 and NJ-1 alone by selecting the mixing ratio, optimizing the culture medium and conditions. The results showed that FH-1 and NJ-1 have the best biodegradation effect on atrazine being mixed in a volume ratio of 3:2. In a single factor experiment, sucrose and NH4Cl provided carbon and nitrogen sources for the mixed bacteria. Subsequently, composition of fermentation medium was further optimized using Box-Behnken design of response surface methodology. Based on the results, growth of mixed bacteria and biodegradation of atrazine performed best effects with a biodegradation rate of 85.6% when sucrose and NH4Cl amounts were 35.30 g/L and 10.28 g/L. The optimal medium condition was 10% inoculum of mixed bacteria, with initial atrazine concentration of 50 mg/L, neutral or weakly alkaline pH value, 30°C. The biodegradation rate reached 97.4%, 11.8% higher than the unoptimized condition.
Collapse
Affiliation(s)
- Ning Gao
- College of Plant Protection, Jilin Agricultural University, Changchun, 130118, China
| | - Jinpeng Zhang
- College of Plant Protection, Jilin Agricultural University, Changchun, 130118, China
| | - Zequn Pan
- College of Plant Protection, Jilin Agricultural University, Changchun, 130118, China
| | - Xiaofeng Zhao
- College of Plant Protection, Jilin Agricultural University, Changchun, 130118, China
| | - Xiulan Ma
- College of Resource and Environment, Jilin Agricultural University, Changchun, 130118, China
| | - Hao Zhang
- College of Plant Protection, Jilin Agricultural University, Changchun, 130118, China.
| |
Collapse
|
20
|
Han L, Liu Y, Fang K, Zhang X, Liu T, Wang F, Wang X. Azoxystrobin dissipation and its effect on soil microbial community structure and function in the presence of chlorothalonil, chlortetracycline and ciprofloxacin. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020; 257:113578. [PMID: 31806458 DOI: 10.1016/j.envpol.2019.113578] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2019] [Revised: 10/22/2019] [Accepted: 11/04/2019] [Indexed: 06/10/2023]
Abstract
The residual characteristics and the adsorption-desorption behaviors of azoxystrobin (AZO) as well as the soil ecological effects in the individual repeated treatments of AZO and its combination with chlorothalonil (CTL), chlortetracycline (CTC) and ciprofloxacin (CIP) were systematically studied in organic manure (OM)-amended soil under laboratory conditions. The presence of CTL, CTC, and CIP, both individually and combined, decreased the sorption affinity of AZO with the Freundlich adsorption and desorption coefficient decreasing by 0.3-24.2%, and CTC and CIP exhibited greater adverse effects than CTL. AZO dissipated slowly and the residues significantly accumulated during ten repeated treatments. The dissipation of AZO was inhibited to different degrees in the combined treatments. Biolog analysis revealed that the soil microbial functional diversity in the OM-soil + AZO and OM-soil + AZO + CTL treatments was higher than that in the OM-soil treatment during the former three repeated treatments, but which was inhibited during the latter seven repeated treatments. The soil microbial functional diversity in the OM-soil + AZO + CTC, OM-soil + AZO + CIP and OM-soil + AZO + CTL + CTC + CIP treatments was inhibited during the ten repeated treatments compared with OM-soil treatment. Metagenomic results showed that all repeated treatments significantly increased the relative abundance of Actinobacteria, but significantly decreased that of Proteobacteria and Firmicutes during the ten repeated treatments. Furthermore, the relative abundance of soil dominant bacterial genera Rhodococcus, Mycobacterium and Arthrobacter in all the repeated treatments significantly increased by 1.5-1283.9% compared with the OM-soil treatment. It is concluded that coexistence of CTL, CTC and CIP, both individually and combined, with AZO can inhibit the dissipation of AZO, reduce the adsorption affinity of AZO on soil, and alter the soil microbial community structure and functional diversity.
Collapse
Affiliation(s)
- Lingxi Han
- Tobacco Research Institute of Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, PR China
| | - Yalei Liu
- Tobacco Research Institute of Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, PR China
| | - Kuan Fang
- Tobacco Research Institute of Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, PR China
| | - Xiaolian Zhang
- Tobacco Research Institute of Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, PR China
| | - Tong Liu
- Tobacco Research Institute of Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, PR China
| | - Fenglong Wang
- Tobacco Research Institute of Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, PR China
| | - Xiuguo Wang
- Tobacco Research Institute of Chinese Academy of Agricultural Sciences (CAAS), Qingdao 266101, PR China.
| |
Collapse
|
21
|
Lazarini-Martínez A, Pérez-Valdespino A, Martínez FH, Ordaz NR, Galíndez-Mayer J, Juárez-Ramírez C, Curiel-Quesada E. Assembly of an atrazine catabolic operon and its introduction to Gram-negative hosts for robust and stable degradation of triazine herbicides. FEMS Microbiol Lett 2019; 366:5634263. [DOI: 10.1093/femsle/fnz233] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2019] [Accepted: 11/19/2019] [Indexed: 01/24/2023] Open
Abstract
ABSTRACTIn 1995, Pseudomonas sp. ADP, capable of metabolizing atrazine, was isolated from contaminated soil. Genes responsible for atrazine mineralization were found scattered in the 108.8 kb pADP-1 plasmid carried by this strain, some of them flanked by insertion sequences rendering them unstable. The goal of this work was to construct a transcriptional unit containing the atz operon in an easy to transfer manner, to be introduced and inherited stably by Gram-negative bacteria. atz genes were PCR amplified, joined into an operon and inserted onto the mobilizable plasmid pBAMD1–2. Primers were designed to add efficient transcription and translation signals. Plasmid bearing the atz operon was transferred to different Gram-negative strains by conjugation, which resulted in Tn5 transposase-mediated chromosomal insertion of the atz operon. To test the operon activity, atrazine degradation by transposants was assessed both colorimetrically and by high-performance liquid chromatography (HPLC). Transposants mineralized atrazine more efficiently than wild-type Pseudomonas sp. ADP and did not accumulate cyanuric acid. Atrazine degradation was not repressed by simple nitrogen sources. Genes conferring atrazine-mineralizing capacities were stable and had little or null effect on the fitness of different transposants. Introduction of catabolic operons in a stable fashion could be used to develop bacteria with better degrading capabilities useful in bioremediation.
Collapse
Affiliation(s)
- Alfredo Lazarini-Martínez
- Department of Biochemistry, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional, Prolongación de Carpio y Plan de Ayala S/N, Col. Santo Tomás. CP11340 Mexico City, Mexico
| | - Abigail Pérez-Valdespino
- Department of Biochemistry, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional, Prolongación de Carpio y Plan de Ayala S/N, Col. Santo Tomás. CP11340 Mexico City, Mexico
| | - Fernando Hernández Martínez
- Department of Biochemistry, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional, Prolongación de Carpio y Plan de Ayala S/N, Col. Santo Tomás. CP11340 Mexico City, Mexico
| | - Nora Ruiz Ordaz
- Department of Biochemical Engineering, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional. Av. Wilfrido Massieu 399, Unidad Adolfo López Mateos, CP07738 Mexico City, Mexico
| | - Juvencio Galíndez-Mayer
- Department of Biochemical Engineering, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional. Av. Wilfrido Massieu 399, Unidad Adolfo López Mateos, CP07738 Mexico City, Mexico
| | - Cleotilde Juárez-Ramírez
- Department of Biochemical Engineering, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional. Av. Wilfrido Massieu 399, Unidad Adolfo López Mateos, CP07738 Mexico City, Mexico
| | - Everardo Curiel-Quesada
- Department of Biochemistry, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional, Prolongación de Carpio y Plan de Ayala S/N, Col. Santo Tomás. CP11340 Mexico City, Mexico
| |
Collapse
|
22
|
Jakinala P, Lingampally N, Kyama A, Hameeda B. Enhancement of atrazine biodegradation by marine isolate Bacillus velezensis MHNK1 in presence of surfactin lipopeptide. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 182:109372. [PMID: 31255866 DOI: 10.1016/j.ecoenv.2019.109372] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2019] [Revised: 05/15/2019] [Accepted: 06/19/2019] [Indexed: 06/09/2023]
Abstract
Atrazine is one of the widely used toxic herbicide and considered as serious environmental contaminant worldwide due to its long term use in crop production. In this study, the effect of surfactin lipopeptide produced by Bacillus velezensis MHNK1 on atrazine biodegradation was investigated. B. velezensis MHNK1 produced 0.83 ± 0.07 g/L of anionic biosurfactant that reduced surface tension from 72.12 ± 0.02 to 33.2 ± 0.61 mN/m and CMC was 40 mg/L with 85.21 ± 1.60% emulsification index. Further, biosurfactant was characterized as surfactin by TLC, HPLC, FTIR, 1H and 13C NMR and LCMS-ESI. B. velezensis MHNK1 showed 87.10 ± 3.10% atrazine biodegradation within 5 days which was revealed by HPLC and MS analysis. Atrazine biodegradation using a combination of B. velezensis MHNK1 (2%) and surfactin (2 CMC) resulted in 100 ± 1.20% degradation within 4 days. Presence of atrazine degrading genes in B. velezensis MHNK1 was also confirmed by PCR. To the best of our knowledge, there are no previous reports available on atrazine degradation using B. velezensis strain and also in combination with surfactin. The results of this study reveal that strain B. velezensis MHNK1 and surfactin can be potential source of ecofriendly application for removal of atrazine from contaminated sites.
Collapse
Affiliation(s)
| | | | - Archana Kyama
- Department of Microbiology, Osmania University, Hyderabad, India
| | - Bee Hameeda
- Department of Microbiology, Osmania University, Hyderabad, India.
| |
Collapse
|
23
|
Kolekar PD, Patil SM, Suryavanshi MV, Suryawanshi SS, Khandare RV, Govindwar SP, Jadhav JP. Microcosm study of atrazine bioremediation by indigenous microorganisms and cytotoxicity of biodegraded metabolites. JOURNAL OF HAZARDOUS MATERIALS 2019; 374:66-73. [PMID: 30978632 DOI: 10.1016/j.jhazmat.2019.01.023] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2018] [Revised: 12/28/2018] [Accepted: 01/10/2019] [Indexed: 06/09/2023]
Abstract
Intensive use of atrazine in agriculture to increase crop productivity has resulted in pollution and consequently deteriorated the environment. Three isolated bacteria, Rhodococcus sp. BCH2 (RB), Bacillus sp. PDK1 (BP1) and Bacillus sp. PDK2 (BP2) possessing capability to degrade atrazine were used in different combinations (RB + BP1, RB + BP2, BP1 + BP2, RB + BP1 + BP2) to prepare a highly effective bacterial consortium which can significantly reduce the toxicity of atrazine. Cytotoxicity tests evaluated by MTT assay on HepG2 indicated significant decrease in the toxicity of atrazine by the consortium RB + BP1 + BP2 due to its effective degradation and formation of simpler and less/nontoxic metabolites compared to other combinations of consortia. A microcosm study was conducted to check the survivability of this consortium (RB + BP1 + BP2) in the presence of atrazine and indigenous soil microflora for four weeks. LC-Q-TOF/MS analysis revealed that RB + BP1 + BP2 could degrade atrazine to various simple metabolites in the microcosm. The cluster analysis of the DGGE patterns of the microcosm of control-soil, soil exposed to atrazine and soil augmented with consortium in the presence of atrazine (1000 mg kg-1) revealed a shift in microbial community of soil. The microbial dynamics studies suggested that the augmented bacteria were well-thrived with natural microflora during four weeks of exposure to atrazine.
Collapse
Affiliation(s)
- Parag D Kolekar
- Department of Biotechnology, Shivaji University, Kolhapur, 416004, India; Department of Biochemistry, Shivaji University, Kolhapur, 416004, India
| | - Swapnil M Patil
- Department of Earth Resources and Environmental Engineering, Hanyang University, Seoul, 04763, South Korea
| | | | | | - Rahul V Khandare
- Amity Institute of Biotechnology, Amity University, Mumbai, 410206, India
| | - Sanjay P Govindwar
- Department of Earth Resources and Environmental Engineering, Hanyang University, Seoul, 04763, South Korea
| | - Jyoti P Jadhav
- Department of Biotechnology, Shivaji University, Kolhapur, 416004, India; Department of Biochemistry, Shivaji University, Kolhapur, 416004, India.
| |
Collapse
|
24
|
Chouler J, Di Lorenzo M. Pesticide detection by a miniature microbial fuel cell under controlled operational disturbances. WATER SCIENCE AND TECHNOLOGY : A JOURNAL OF THE INTERNATIONAL ASSOCIATION ON WATER POLLUTION RESEARCH 2019; 79:2231-2241. [PMID: 31411577 DOI: 10.2166/wst.2019.207] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Microbial fuel cell (MFC) technology holds enormous potential for inexpensive real-time and onsite testing of water sources. With the intent of defining optimal operational conditions, we investigated the effect of environmental factors (changes in temperature, pH and ionic strength), on the performance of a single chamber miniature MFC sensor. The pH of the influent had the greatest effect on the MFC performance, with a 0.531 ± 0.064 μA cm-2 current variation per unit change of pH. Within the range tested, temperature and ionic strength had only a minor impact (0.010 ± 0.001 μA °C-1 cm-2 and of 0.027 ± 0.003 μA mS-1 cm cm-2 respectively). Under controlled operational conditions, for the first time, we demonstrated the ability of this biosensor to detect one of the most commonly applied pesticides worldwide, atrazine. The sensitivity to atrazine was 1.39 ± 0.26 ppm-1 cm-2, with a detection range of 0.05-0.3 ppm. Guidelines for systematic studies of MFC biosensors for practical applications through a factorial design approach are also provided. Consequently, our work not only enforces the promise of miniature MFC biosensors for organic pollutants detection in waters, but it also provides important directions towards future investigations for infield applications.
Collapse
Affiliation(s)
- Jon Chouler
- Centre for Biosensors, Bioelectronics and Biodevices and Department of Chemical Engineering, University of Bath, Bath BA2 7AY, UK E-mail: ; Centre for Sustainable Chemical Technologies, University of Bath, Bath BA2 7AY, UK
| | - Mirella Di Lorenzo
- Centre for Biosensors, Bioelectronics and Biodevices and Department of Chemical Engineering, University of Bath, Bath BA2 7AY, UK E-mail:
| |
Collapse
|
25
|
Bragança I, Mucha AP, Tomasino MP, Santos F, Lemos PC, Delerue-Matos C, Domingues VF. Deltamethrin impact in a cabbage planted soil: Degradation and effect on microbial community structure. CHEMOSPHERE 2019; 220:1179-1186. [PMID: 33395804 DOI: 10.1016/j.chemosphere.2019.01.004] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Revised: 12/25/2018] [Accepted: 01/02/2019] [Indexed: 06/12/2023]
Abstract
Synthetic pyrethroids (SPs) are one of the most common pesticides used worldwide. Their use has greatly increased in the last decades and its' continuous application lead to added pesticides concentration in soil. Consequently, SPs may enter the food chain, affecting the environment and human health. The degradation over time of the pyrethroid pesticide deltamethrin applied to cabbages was monitored. The evolution was followed both on cabbages and the surrounding soils, and the soil microbial community characterized by next-generation sequencing of the 16S rRNA gene. The main shift in the microbial community structure was observed during the first 30 days after pesticides' application. The modification in the microbial community composition, where an increased abundance of Nocardioides sp. and Sphingomonas sp. were observed, was correlated respectively with the conversions of deltamethrin and its metabolite, 3-phenoxybenzoic acid (3-PBA). Although deltamethrin was not found in any of the tested samples (soil and cabbage) after 180 days, it caused an environmental impact much further than the 7 days security interval. These findings suggest that deltamethrin application can disturb soil microbial community and that natural biodegradation can have an important part in pesticides soil decontamination.
Collapse
Affiliation(s)
- Idalina Bragança
- REQUIMTE/LAQV-GRAQ, Instituto Superior de Engenharia do Porto, Politécnico do Porto, Rua Dr. António Bernardino de Almeida, 431, 4200-072 Porto, Portugal
| | - Ana P Mucha
- CIMAR/CIIMAR - Centro Interdisciplinar de Investigação Marinha e Ambiental, Universidade do Porto, Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos s/n, 4450-208 Matosinhos, Portugal
| | - Maria P Tomasino
- CIMAR/CIIMAR - Centro Interdisciplinar de Investigação Marinha e Ambiental, Universidade do Porto, Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos s/n, 4450-208 Matosinhos, Portugal
| | - Filipa Santos
- CIMAR/CIIMAR - Centro Interdisciplinar de Investigação Marinha e Ambiental, Universidade do Porto, Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos s/n, 4450-208 Matosinhos, Portugal
| | - Paulo C Lemos
- REQUIMTE/LAQV, Chemistry Dep., FCT/Universidade NOVA de Lisboa, Campus de Caparica, 2829-516 Caparica, Portugal
| | - Cristina Delerue-Matos
- REQUIMTE/LAQV-GRAQ, Instituto Superior de Engenharia do Porto, Politécnico do Porto, Rua Dr. António Bernardino de Almeida, 431, 4200-072 Porto, Portugal
| | - Valentina F Domingues
- REQUIMTE/LAQV-GRAQ, Instituto Superior de Engenharia do Porto, Politécnico do Porto, Rua Dr. António Bernardino de Almeida, 431, 4200-072 Porto, Portugal.
| |
Collapse
|
26
|
Mu Y, Zhan G, Huang C, Wang X, Ai Z, Zou J, Luo S, Zhang L. Dechlorination-Hydroxylation of Atrazine to Hydroxyatrazine with Thiosulfate: A Detoxification Strategy in Seconds. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2019; 53:3208-3216. [PMID: 30793590 DOI: 10.1021/acs.est.8b06351] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Hydroxylation of atrazine to nontoxic hydroxyatrazine is generally considered an efficient detoxification method to remediate atrazine-contaminated soil and water. However, previous studies suggested that hydroxylation was not the dominant pathway for atrazine degradation in the hydroxyl radical-generating systems such as Fenton reaction, ozonation and UV/H2O2. Herein we report that the addition of sodium thiosulfate can realize rapid hydroxylation of atrazine to hydroxyatrazine at pH ≤ 4 under room temperature. High resolution mass spectra and isotope experiments results revealed that the hydroxylation of atrazine was involved with nucleophilic substitution and subsequent hydrolysis reaction as follows. HS2O3-, as a species of thiosulfate only at pH ≤ 4, first attacked C atom connecting to chlorine of atrazine to dechlorinate atrazine and produce C8H14N5S2O3-. Subsequently, the S-S bond of C8H14N5S2O3- was cleaved easily to form SO3 and C8H14N5S-. Next, C8H14N5S- was hydrolyzed to generate hydroxyatrazine and H2S. Finally, the comproportionation of SO3 and H2S in situ produced S0 during hydroxylation of atrazine with thiosulfate. This study clarifies the importance of degradation pathway on the removal of pollutants, and also provides a nonoxidative strategy for atrazine detoxification in seconds.
Collapse
Affiliation(s)
- Yi Mu
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Institute of Environmental Chemistry , Central China Normal University , Wuhan 430079 , People's Republic of China
- Key Laboratory of Jiangxi Province for Persistent Pollutants Control and Resources Recycle , Nanchang Hangkong University , Nanchang 330063 , People's Republic of China
| | - Guangming Zhan
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Institute of Environmental Chemistry , Central China Normal University , Wuhan 430079 , People's Republic of China
| | - Cuimei Huang
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Institute of Environmental Chemistry , Central China Normal University , Wuhan 430079 , People's Republic of China
| | - Xiaobing Wang
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Institute of Environmental Chemistry , Central China Normal University , Wuhan 430079 , People's Republic of China
| | - Zhihui Ai
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Institute of Environmental Chemistry , Central China Normal University , Wuhan 430079 , People's Republic of China
| | - Jianping Zou
- Key Laboratory of Jiangxi Province for Persistent Pollutants Control and Resources Recycle , Nanchang Hangkong University , Nanchang 330063 , People's Republic of China
| | - Shenglian Luo
- Key Laboratory of Jiangxi Province for Persistent Pollutants Control and Resources Recycle , Nanchang Hangkong University , Nanchang 330063 , People's Republic of China
| | - Lizhi Zhang
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Institute of Environmental Chemistry , Central China Normal University , Wuhan 430079 , People's Republic of China
| |
Collapse
|
27
|
Anteneh YS, Franco CMM. Whole Cell Actinobacteria as Biocatalysts. Front Microbiol 2019; 10:77. [PMID: 30833932 PMCID: PMC6387938 DOI: 10.3389/fmicb.2019.00077] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2018] [Accepted: 01/15/2019] [Indexed: 12/25/2022] Open
Abstract
Production of fuels, therapeutic drugs, chemicals, and biomaterials using sustainable biological processes have received renewed attention due to increasing environmental concerns. Despite having high industrial output, most of the current chemical processes are associated with environmentally undesirable by-products which escalate the cost of downstream processing. Compared to chemical processes, whole cell biocatalysts offer several advantages including high selectivity, catalytic efficiency, milder operational conditions and low impact on the environment, making this approach the current choice for synthesis and manufacturing of different industrial products. In this review, we present the application of whole cell actinobacteria for the synthesis of biologically active compounds, biofuel production and conversion of harmful compounds to less toxic by-products. Actinobacteria alone are responsible for the production of nearly half of the documented biologically active metabolites and many enzymes; with the involvement of various species of whole cell actinobacteria such as Rhodococcus, Streptomyces, Nocardia and Corynebacterium for the production of useful industrial commodities.
Collapse
Affiliation(s)
- Yitayal Shiferaw Anteneh
- College of Medicine and Public Health, Medical Biotechnology, Flinders University, Bedford Park, SA, Australia
- Department of Medical Microbiology, College of Medicine, Addis Ababa University, Addis Ababa, Ethiopia
| | | |
Collapse
|
28
|
Yu J, He H, Yang WL, Yang C, Zeng G, Wu X. Magnetic bionanoparticles of Penicillium sp. yz11-22N2 doped with Fe 3O 4 and encapsulated within PVA-SA gel beads for atrazine removal. BIORESOURCE TECHNOLOGY 2018; 260:196-203. [PMID: 29625292 DOI: 10.1016/j.biortech.2018.03.103] [Citation(s) in RCA: 43] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2018] [Revised: 03/20/2018] [Accepted: 03/23/2018] [Indexed: 06/08/2023]
Abstract
A novel magnetic bionanomaterial, Penicillium sp. yz11-22N2 doped with nano Fe3O4 entrapped in polyvinyl alcohol-sodium alginate gel beads (PFEPS), was successfully synthesized. The factors including nutrient substance, temperature, pH, initial concentrations of atrazine and rotational speeds were presented and discussed in detail. Results showed that the highest removal efficiency of atrazine by PFEPS was 91.2% at 8.00 mg/L atrazine. The maximum removal capacity for atrazine was 7.94 mg/g. Meanwhile, it has been found that most of atrazine were removed by metabolism and degradation of Penicillium sp. yz11-22N2, which could use atrazine as the sole source of either carbon or nitrogen. Degradation kinetics of atrazine conformed to first-order kinetics model. The intermediates indicated that the possible pathway for atrazine degradation by PFEPS mainly included hydrolysis dechlorination, dealkylation, side-chain oxidation and ring-opening.
Collapse
Affiliation(s)
- Jiaping Yu
- College of Environmental Science and Engineering, Hunan University, and Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha, Hunan 410082, China
| | - Huijun He
- College of Environmental Science and Engineering, Hunan University, and Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha, Hunan 410082, China
| | - William L Yang
- College of Environmental Science and Engineering, Hunan University, and Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha, Hunan 410082, China
| | - Chunping Yang
- College of Environmental Science and Engineering, Hunan University, and Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha, Hunan 410082, China; Zhejiang Provincial Key Laboratory of Waste Treatment and Recycling, College of Environmental Science and Engineering, Zhejiang Gongshang University, Hangzhou, Zhejiang 310018, China.
| | - Guangming Zeng
- College of Environmental Science and Engineering, Hunan University, and Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha, Hunan 410082, China
| | - Xin Wu
- College of Environmental Science and Engineering, Hunan University, and Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha, Hunan 410082, China
| |
Collapse
|
29
|
Wu X, He H, Yang WL, Yu J, Yang C. Efficient removal of atrazine from aqueous solutions using magnetic Saccharomyces cerevisiae bionanomaterial. Appl Microbiol Biotechnol 2018; 102:7597-7610. [DOI: 10.1007/s00253-018-9143-x] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2018] [Revised: 05/22/2018] [Accepted: 05/23/2018] [Indexed: 12/23/2022]
|
30
|
Cabrera-Orozco A, Galíndez-Nájera SP, Ruiz-Ordaz N, Galíndez-Mayer J, Martínez-Jerónimo F. Biodegradation of a commercial mixture of the herbicides atrazine and S-metolachlor in a multi-channel packed biofilm reactor. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2017; 24:25656-25665. [PMID: 26897582 DOI: 10.1007/s11356-016-6204-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2015] [Accepted: 01/29/2016] [Indexed: 06/05/2023]
Abstract
Atrazine and S-metolachlor are two of the most widely used herbicides for agricultural purposes; consequently, residues of both compounds and their metabolites had been detected in ground and superficial waters. Unlike atrazine, the complete degradation of metolachlor has not been achieved. Hence, the purpose of this research is to study the biodegradation of a commercial mixture of atrazine and S-metolachlor in a prototype of a multi-channel packed-bed-biofilm reactor (MC-PBR) designed with the aim of solving the problems of pressure drop and oxygen transfer, typically found on this type of bioreactors.Because the removal efficiency of the herbicides was increased when Candida tropicalis was added to the original microbial community isolated, the reactor was inoculated with this enriched community. The operational conditions tested in batch and continuous mode did not affect the removal efficiency of atrazine; however, this was not the case for S-metolachlor. The removal rates and efficiencies showed a notable variation along the MC-PBR operation.
Collapse
Affiliation(s)
- Alberto Cabrera-Orozco
- Laboratorio de Bioingeniería, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional. Carpio y Plan de Ayala, Col. Santo Tomás, CP 11340, ENCB-IPN, México, D.F, Mexico
| | - Silvia Patricia Galíndez-Nájera
- School of Chemical Engineering and Analytical Sciences, The University of Manchester, UK. Oxford Rd, Manchester, M60 1QD, UK
| | - Nora Ruiz-Ordaz
- Laboratorio de Bioingeniería, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional. Carpio y Plan de Ayala, Col. Santo Tomás, CP 11340, ENCB-IPN, México, D.F, Mexico.
| | - Juvencio Galíndez-Mayer
- Laboratorio de Bioingeniería, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional. Carpio y Plan de Ayala, Col. Santo Tomás, CP 11340, ENCB-IPN, México, D.F, Mexico.
| | - Fernando Martínez-Jerónimo
- Laboratorio de Bioingeniería, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional. Carpio y Plan de Ayala, Col. Santo Tomás, CP 11340, ENCB-IPN, México, D.F, Mexico
| |
Collapse
|
31
|
Marinho G, Barbosa B, Rodrigues K, Aquino M, Pereira L. Potential of the filamentous fungus Aspergillus niger AN 400 to degrade Atrazine in wastewaters. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2017. [DOI: 10.1016/j.bcab.2016.12.013] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
32
|
Alvarez A, Saez JM, Davila Costa JS, Colin VL, Fuentes MS, Cuozzo SA, Benimeli CS, Polti MA, Amoroso MJ. Actinobacteria: Current research and perspectives for bioremediation of pesticides and heavy metals. CHEMOSPHERE 2017; 166:41-62. [PMID: 27684437 DOI: 10.1016/j.chemosphere.2016.09.070] [Citation(s) in RCA: 269] [Impact Index Per Article: 38.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Revised: 09/15/2016] [Accepted: 09/16/2016] [Indexed: 05/03/2023]
Abstract
Actinobacteria exhibit cosmopolitan distribution since their members are widely distributed in aquatic and terrestrial ecosystems. In the environment they play relevant ecological roles including recycling of substances, degradation of complex polymers, and production of bioactive molecules. Biotechnological potential of actinobacteria in the environment was demonstrated by their ability to remove organic and inorganic pollutants. This ability is the reason why actinobacteria have received special attention as candidates for bioremediation, which has gained importance because of the widespread release of contaminants into the environment. Among organic contaminants, pesticides are widely used for pest control, although the negative impact of these chemicals in the environmental balance is increasingly becoming apparent. Similarly, the extensive application of heavy metals in industrial processes lead to highly contaminated areas worldwide. Several studies focused in the use of actinobacteria for cleaning up the environment were performed in the last 15 years. Strategies such as bioaugmentation, biostimulation, cell immobilization, production of biosurfactants, design of defined mixed cultures and the use of plant-microbe systems were developed to enhance the capabilities of actinobacteria in bioremediation. In this review, we compiled and discussed works focused in the study of different bioremediation strategies using actinobacteria and how they contributed to the improvement of the already existing strategies. In addition, we discuss the importance of omic studies to elucidate mechanisms and regulations that bacteria use to cope with pollutant toxicity, since they are still little known in actinobacteria. A brief account of sources and harmful effects of pesticides and heavy metals is also given.
Collapse
Affiliation(s)
- Analia Alvarez
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Avenida Belgrano y Pasaje Caseros, Tucumán 4000, Argentina; Facultad de Ciencias Naturales e Instituto Miguel Lillo, Universidad Nacional de Tucumán (UNT), Miguel Lillo 205, Tucumán 4000, Argentina.
| | - Juliana Maria Saez
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Avenida Belgrano y Pasaje Caseros, Tucumán 4000, Argentina.
| | - José Sebastian Davila Costa
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Avenida Belgrano y Pasaje Caseros, Tucumán 4000, Argentina.
| | - Veronica Leticia Colin
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Avenida Belgrano y Pasaje Caseros, Tucumán 4000, Argentina.
| | - María Soledad Fuentes
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Avenida Belgrano y Pasaje Caseros, Tucumán 4000, Argentina.
| | - Sergio Antonio Cuozzo
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Avenida Belgrano y Pasaje Caseros, Tucumán 4000, Argentina; Facultad de Ciencias Naturales e Instituto Miguel Lillo, Universidad Nacional de Tucumán (UNT), Miguel Lillo 205, Tucumán 4000, Argentina.
| | - Claudia Susana Benimeli
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Avenida Belgrano y Pasaje Caseros, Tucumán 4000, Argentina.
| | - Marta Alejandra Polti
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Avenida Belgrano y Pasaje Caseros, Tucumán 4000, Argentina; Facultad de Ciencias Naturales e Instituto Miguel Lillo, Universidad Nacional de Tucumán (UNT), Miguel Lillo 205, Tucumán 4000, Argentina.
| | - María Julia Amoroso
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Avenida Belgrano y Pasaje Caseros, Tucumán 4000, Argentina.
| |
Collapse
|
33
|
Characterization and genome functional analysis of a novel metamitron-degrading strain Rhodococcus sp. MET via both triazinone and phenyl rings cleavage. Sci Rep 2016; 6:32339. [PMID: 27578531 PMCID: PMC5006018 DOI: 10.1038/srep32339] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2016] [Accepted: 08/04/2016] [Indexed: 11/12/2022] Open
Abstract
A novel bacterium capable of utilizing metamitron as the sole source of carbon and energy was isolated from contaminated soil and identified as Rhodococcus sp. MET based on its morphological characteristics, BIOLOG GP2 microplate profile, and 16S rDNA phylogeny. Genome sequencing and functional annotation of the isolate MET showed a 6,340,880 bp genome with a 62.47% GC content and 5,987 protein-coding genes. In total, 5,907 genes were annotated with the COG, GO, KEGG, Pfam, Swiss-Prot, TrEMBL, and nr databases. The degradation rate of metamitron by the isolate MET obviously increased with increasing substrate concentrations from 1 to 10 mg/l and subsequently decreased at 100 mg/l. The optimal pH and temperature for metamitron biodegradation were 7.0 and 20–30 °C, respectively. Based on genome annotation of the metamitron degradation genes and the metabolites detected by HPLC-MS/MS, the following metamitron biodegradation pathways were proposed: 1) Metamitron was transformed into 2-(3-hydrazinyl-2-ethyl)-hydrazono-2-phenylacetic acid by triazinone ring cleavage and further mineralization; 2) Metamitron was converted into 3-methyl-4-amino-6(2-hydroxy-muconic acid)-1,2,4-triazine-5(4H)-one by phenyl ring cleavage and further mineralization. The coexistence of diverse mineralization pathways indicates that our isolate may effectively bioremediate triazinone herbicide-contaminated soils.
Collapse
|
34
|
Hu E, Hu Y, Cheng H. Performance of a novel microwave-based treatment technology for atrazine removal and destruction: Sorbent reusability and chemical stability, and effect of water matrices. JOURNAL OF HAZARDOUS MATERIALS 2015; 299:444-452. [PMID: 26241770 DOI: 10.1016/j.jhazmat.2015.07.031] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2015] [Revised: 06/22/2015] [Accepted: 07/12/2015] [Indexed: 06/04/2023]
Abstract
Transition metal-exchanged dealuminated Y zeolites were used to adsorb atrazine from aqueous solutions, followed by regeneration of the sorbents and destruction of the sorbed atrazine with microwave irradiation. Exchange of copper and iron into the zeolite's micropores significantly enhanced its sorption capacity and selectivity toward atrazine, and increased the microwave-induced degradation rate of the sorbed atrazine by 3-4-folds. Both the copper- and iron-exchanged zeolites could be regenerated and reused multiple times, while the catalytic activity of the latter was more robust due to the much greater chemical stability of Fe(3+) species in the micropores. The presence of humic acid, and common cations and anions had little impact on the sorption of atrazine on the transition metal-exchanged zeolites. In the treatment of atrazine spiked in natural surface water and groundwater samples, sorptive removal of atrazine was found to be impacted by the level of dissolved organic carbon, probably through competition for the micropore spaces and pore blocking, while the water matrices exhibited no strong effect on the microwave-induced degradation of sorbed atrazine. Overall, iron-exchanged dealuminated Y zeolites show great potential for removal and destruction of atrazine from contaminated surface water and groundwater in practical implementation of the novel treatment technology.
Collapse
Affiliation(s)
- Erdan Hu
- State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Yuanan Hu
- State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Hefa Cheng
- State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China; MOE Laboratory for Earth Surface Processes, College of Urban and Environmental Sciences, Peking University, Beijing 100871, China.
| |
Collapse
|
35
|
Sherma J. Review of advances in the thin layer chromatography of pesticides: 2012-2014. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART. B, PESTICIDES, FOOD CONTAMINANTS, AND AGRICULTURAL WASTES 2015; 50:301-316. [PMID: 25826098 DOI: 10.1080/03601234.2015.1000163] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Publications reporting techniques and applications of thin layer chromatography (planar chromatography) for the separation, detection, qualitative, and quantitative determination, and preparative isolation of pesticides and their metabolites are reviewed for the period from November 1, 2012 to November 1, 2014. Analyses are described for a variety of sample types and pesticide classes. In addition to references on residue analysis, studies such as pesticide structure - retention relationships, identification and characterization of natural and synthesized pesticides, metabolism, bioactivity, degradation, soil mobility, and lipophilicity are covered.
Collapse
Affiliation(s)
- Joseph Sherma
- a Department of Chemistry , Lafayette College , Easton , Pennsylvania , USA
| |
Collapse
|
36
|
Zhang B, Ma K, Li B. Inflammatory reaction regulated by microglia plays a role in atrazine-induced dopaminergic neuron degeneration in the substantia nigra. J Toxicol Sci 2015; 40:437-50. [DOI: 10.2131/jts.40.437] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Affiliation(s)
- Bo Zhang
- Department of Toxicology, School of Public Health, Harbin Medical University, China
| | - Kun Ma
- Department of Toxicology, School of Public Health, Harbin Medical University, China
| | - Baixiang Li
- Department of Toxicology, School of Public Health, Harbin Medical University, China
| |
Collapse
|
37
|
Kabra AN, Ji MK, Choi J, Kim JR, Govindwar SP, Jeon BH. Toxicity of atrazine and its bioaccumulation and biodegradation in a green microalga, Chlamydomonas mexicana. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2014; 21:12270-12278. [PMID: 24928381 DOI: 10.1007/s11356-014-3157-4] [Citation(s) in RCA: 65] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2014] [Accepted: 06/04/2014] [Indexed: 06/03/2023]
Abstract
This study evaluated the toxicity of herbicide atrazine, along with its bioaccumulation and biodegradation in the green microalga Chlamydomonas mexicana. At low concentration (10 μg L(-1)), atrazine had no profound effect on the microalga, while higher concentrations (25, 50, and 100 μg L(-1)) imposed toxicity, leading to inhibition of cell growth and chlorophyll a accumulation by 22 %, 33 %, and 36 %, and 13 %, 24 %, and 27 %, respectively. Atrazine 96-h EC50 for C. mexicana was estimated to be 33 μg L(-1). Microalga showed a capability to accumulate atrazine in the cell and to biodegrade the cell-accumulated atrazine resulting in 14-36 % atrazine degradation at 10-100 μg L(-1). Increasing atrazine concentration decreased the total fatty acids (from 102 to 75 mg g(-1)) and increased the unsaturated fatty acid content in the microalga. Carbohydrate content increased gradually with the increase in atrazine concentration up to 15 %. This study shows that C. mexicana has the capability to degrade atrazine and can be employed for the remediation of atrazine-contaminated streams.
Collapse
Affiliation(s)
- Akhil N Kabra
- Department of Environmental Engineering, Yonsei University, Wonju, 220-710, South Korea
| | | | | | | | | | | |
Collapse
|
38
|
Watharkar AD, Khandare RV, Waghmare PR, Jagadale AD, Govindwar SP, Jadhav JP. Treatment of textile effluent in a developed phytoreactor with immobilized bacterial augmentation and subsequent toxicity studies on Etheostoma olmstedi fish. JOURNAL OF HAZARDOUS MATERIALS 2014; 283:698-704. [PMID: 25464312 DOI: 10.1016/j.jhazmat.2014.10.019] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2014] [Revised: 09/30/2014] [Accepted: 10/03/2014] [Indexed: 06/04/2023]
Abstract
A static hydroponic bioreactor using nursery grown plants of Pogonatherum crinitum along with immobilized Bacillus pumilus cells was developed for the treatment of textile wastewater. Independent reactors with plants and immobilized cells were also kept for performance and efficacy evaluation. The effluent samples characterized before and after their treatment showed that the plant-bacterial consortium reactor was more efficient than those of individual plant and bacterium reactors. COD, BOD, ADMI, conductivity, turbidity, TDS and TSS of the textile effluent was found to be reduced by 78, 70, 93, 4, 90, 13 and 70% respectively within 12 d by the consortial set. HPTLC analysis revealed the transformation of the textile effluent to new products. The phytotoxicity study on Phaeseolus mungo and Sorghum vulgare seeds showed reduced toxicity of treated effluents. The animal toxicity study performed on Etheostoma olmstedi fishes showed the toxic nature of untreated effluent giving extreme stress to fishes leading to death. Histology of fish gills exposed to treated effluent was found to be less affected. The oxidative stress related enzymes like superoxide dismutase and catalase were found to show decreased activities and less lipid peroxidation in fishes exposed to treated effluent.
Collapse
Affiliation(s)
| | - Rahul V Khandare
- School of Life Sciences, North Maharashtra University, Jalgaon, India
| | | | | | | | - Jyoti P Jadhav
- Department of Biotechnology, Shivaji University, Kolhapur, India; Department of Biochemistry, Shivaji University, Kolhapur, India.
| |
Collapse
|