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Lijina P, Manjunatha JR, Gnanesh Kumar BS. Characterization of free oligosaccharides from garden cress seed aqueous exudate using PGC LC-MS/MS and NMR spectroscopy. Carbohydr Res 2023; 532:108914. [PMID: 37541111 DOI: 10.1016/j.carres.2023.108914] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Revised: 07/26/2023] [Accepted: 07/27/2023] [Indexed: 08/06/2023]
Abstract
Garden cress seeds produces mucilage that has found various food applications, however, there is little information on the free oligosaccharides (FOS) contents in these seeds. Herein, we explored the presence of FOS in cress seed aqueous exudate. PGC-LC MS/MS analysis indicated the presence of mainly hexose containing oligosaccharides such as raffinose, stachyose and verbascose belonging to raffinose family of oligosaccharides (RFOs). In addition, minor fraction of planteose, isomeric tri- and tetrasaccharides were also observed. Further, the structural confirmation of the abundant tri- and tetrasaccharide were obtained through 1D and 2D NMR analysis. Thus, the RFOs presence in cress seeds would enhance its bio-functionalities.
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Affiliation(s)
- P Lijina
- Department of Biochemistry, CSIR-Central Food Technological Research Institute (CFTRI), Mysuru, 570020, Karnataka, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - J R Manjunatha
- Central Instrumentation Facility and Service, CSIR-Central Food Technological Research Institute (CFTRI), Mysuru, 570020, Karnataka, India
| | - B S Gnanesh Kumar
- Department of Biochemistry, CSIR-Central Food Technological Research Institute (CFTRI), Mysuru, 570020, Karnataka, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
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Okazawa A, Baba A, Okano H, Tokunaga T, Nakaue T, Ogawa T, Shimma S, Sugimoto Y, Ohta D. Involvement of α-galactosidase OmAGAL2 in planteose hydrolysis during seed germination of Orobanche minor. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:1992-2004. [PMID: 34850875 PMCID: PMC8982430 DOI: 10.1093/jxb/erab527] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Accepted: 11/30/2021] [Indexed: 06/01/2023]
Abstract
Root parasitic weeds of the Orobanchaceae, such as witchweeds (Striga spp.) and broomrapes (Orobanche and Phelipanche spp.), cause serious losses in agriculture worldwide, and efforts have been made to control these parasitic weeds. Understanding the characteristic physiological processes in the life cycle of root parasitic weeds is particularly important to identify specific targets for growth modulators. In our previous study, planteose metabolism was revealed to be activated soon after the perception of strigolactones in germinating seeds of O. minor. Nojirimycin inhibited planteose metabolism and impeded seed germination of O. minor, indicating a possible target for root parasitic weed control. In the present study, we investigated the distribution of planteose in dry seeds of O. minor by matrix-assisted laser desorption/ionization-mass spectrometry imaging. Planteose was detected in tissues surrounding-but not within-the embryo, supporting its suggested role as a storage carbohydrate. Biochemical assays and molecular characterization of an α-galactosidase family member, OmAGAL2, indicated that the enzyme is involved in planteose hydrolysis in the apoplast around the embryo after the perception of strigolactones, to provide the embryo with essential hexoses for germination. These results indicate that OmAGAL2 is a potential molecular target for root parasitic weed control.
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Affiliation(s)
- Atsushi Okazawa
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Japan
| | - Atsuya Baba
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Japan
| | - Hikaru Okano
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Japan
| | - Tomoya Tokunaga
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Japan
| | - Tsubasa Nakaue
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Japan
| | - Takumi Ogawa
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Japan
| | - Shuichi Shimma
- Graduate School of Engineering, Osaka University, Suita, Japan
| | - Yukihiro Sugimoto
- Graduate School of Agricultural Science, Kobe University, Kobe, Japan
| | - Daisaku Ohta
- Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Japan
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Okazawa A, Wakabayashi T, Muranaka T, Sugimoto Y, Ohta D. The effect of nojirimycin on the transcriptome of germinating Orobanche minor seeds. JOURNAL OF PESTICIDE SCIENCE 2020; 45:230-237. [PMID: 33304192 PMCID: PMC7691558 DOI: 10.1584/jpestics.d20-057] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 09/29/2020] [Indexed: 06/02/2023]
Abstract
Orobanchaceae root parasitic weeds cause serious agricultural damage worldwide. Although numerous studies have been conducted to establish an effective control strategy for the growth and spread of root parasitic weeds, no practical method has been developed so far. Previously, metabolomic analyses were conducted on germinating seeds of a broomrape, Orobanche minor, to find novel targets for its selective control. Interestingly, planteose metabolism was identified as a possible target, and nojirimycin (NJ) selectively inhibited the germination of O. minor by intercepting planteose metabolism, although its precise mode of action was unclear. Here, transcriptome analysis by RNA-Seq was conducted to obtain molecular insight into the effects of NJ on germinating O. minor seeds. Differential gene expression analysis results suggest that NJ alters sugar metabolism and/or signaling, which is required to promote seed germination. This finding will contribute to understanding the effect of NJ and establishing a novel strategy for parasitic weed control.
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Affiliation(s)
- Atsushi Okazawa
- Department of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University
| | - Takatoshi Wakabayashi
- Department of Biotechnology, Graduate School of Engineering, Osaka University
- Department of Agrobioscience, Graduate School of Agricultural Sciences, Kobe University
| | - Toshiya Muranaka
- Department of Biotechnology, Graduate School of Engineering, Osaka University
| | - Yukihiro Sugimoto
- Department of Agrobioscience, Graduate School of Agricultural Sciences, Kobe University
| | - Daisaku Ohta
- Department of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University
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Xing X, Hsieh YSY, Yap K, Ang ME, Lahnstein J, Tucker MR, Burton RA, Bulone V. Isolation and structural elucidation by 2D NMR of planteose, a major oligosaccharide in the mucilage of chia (Salvia hispanica L.) seeds. Carbohydr Polym 2017; 175:231-240. [PMID: 28917861 DOI: 10.1016/j.carbpol.2017.07.059] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2017] [Accepted: 07/20/2017] [Indexed: 12/26/2022]
Abstract
An oligosaccharide was isolated in high purity and excellent yield from the water-extractable mucilage of chia (Salvia hispanica L.) seeds using an optimized solid-phase extraction method. LC-MS analysis showed that the compound presents a molecular mass of 504Da and trifluoroacetic acid hydrolysis revealed that it consists of galactose, glucose and fructose. Glycosidic linkage analysis showed that the oligosaccharide contains two non-reducing ends corresponding to terminal glucopyranose and terminal galactopyranose, respectively. The oligosaccharide was identified as planteose by the complete assignment of a series of 2D NMR spectra (COSY, TOCSY, ROESY, HSQC, and HMBC). The significance of the presence of planteose in chia seeds is discussed in the context of nutrition and food applications.
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Affiliation(s)
- Xiaohui Xing
- Australian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia; Adelaide Glycomics, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia; Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, SE 10691, Sweden
| | - Yves S Y Hsieh
- Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, SE 10691, Sweden; Wallenberg Wood Science Center, Royal Institute of Technology (KTH), Stockholm, SE 10044, Sweden
| | - Kuok Yap
- Australian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia
| | - Main E Ang
- Australian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia
| | - Jelle Lahnstein
- Australian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia; Adelaide Glycomics, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia
| | - Matthew R Tucker
- Australian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia
| | - Rachel A Burton
- Australian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia
| | - Vincent Bulone
- Australian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia; Adelaide Glycomics, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Urrbrae, SA 5064, Australia; Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, SE 10691, Sweden; Wallenberg Wood Science Center, Royal Institute of Technology (KTH), Stockholm, SE 10044, Sweden.
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Wakabayashi T, Joseph B, Yasumoto S, Akashi T, Aoki T, Harada K, Muranaka S, Bamba T, Fukusaki E, Takeuchi Y, Yoneyama K, Muranaka T, Sugimoto Y, Okazawa A. Planteose as a storage carbohydrate required for early stage of germination of Orobanche minor and its metabolism as a possible target for selective control. JOURNAL OF EXPERIMENTAL BOTANY 2015; 66:3085-97. [PMID: 25821071 PMCID: PMC4449533 DOI: 10.1093/jxb/erv116] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Root parasitic weeds in Orobanchaceae cause serious damage to worldwide agriculture. Germination of the parasites requires host-derived germination stimulants, such as strigolactones, as indicators of host roots within reach of the parasite's radicles. This unique germination process was focused on to identify metabolic pathways required for germination, and to design a selective control strategy. A metabolomic analysis of germinating seeds of clover broomrape, Orobanche minor, was conducted to identify its distinctive metabolites. Consequently, a galactosyl-sucrose trisaccharide, planteose (α-d-galactopyranosyl-(1→6)-β-d-fructofuranosyl-(2→1)-α-d-glucopyranoside), was identified as a metabolite that decreased promptly after reception of the germination stimulant. To investigate the importance of planteose metabolism, the effects of several glycosidase inhibitors were examined, and nojirimycin bisulfite (NJ) was found to alter the sugar metabolism and to selectively inhibit the germination of O. minor. Planteose consumption was similar in NJ-treated seeds and non-treated germinating seeds; however, NJ-treated seeds showed lower consumption of sucrose, a possible intermediate of planteose metabolism, resulting in significantly less glucose and fructose. This inhibitory effect was recovered by adding glucose. These results suggest that planteose is a storage carbohydrate required for early stage of germination of O. minor, and NJ inhibits germination by blocking the supply of essential glucose from planteose and sucrose. Additionally, NJ selectively inhibited radicle elongation of germinated seeds of Orobanchaceae plants (Striga hermonthica and Phtheirospermum japonicum). Thus, NJ will be a promising tool to develop specific herbicides to the parasites, especially broomrapes, and to improve our understanding of the molecular mechanisms of this unique germination.
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Affiliation(s)
- Takatoshi Wakabayashi
- Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Benesh Joseph
- Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Shuhei Yasumoto
- Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Tomoyoshi Akashi
- Department of Applied Biological Science, Nihon University, 1866 Kameino, Fujisawa, Kanagawa 252-8510, Japan
| | - Toshio Aoki
- Department of Applied Biological Science, Nihon University, 1866 Kameino, Fujisawa, Kanagawa 252-8510, Japan
| | - Kazuo Harada
- Applied Environmental Biology, Graduate School of Pharmaceutical Science, Osaka University, 1-6 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Satoru Muranaka
- International Institute of Tropical Agriculture Kano, PMB3112, Sabo Bakin Zuwo Road, Kano, Nigeria
| | - Takeshi Bamba
- Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Eiichiro Fukusaki
- Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Yasutomo Takeuchi
- Weed Science Center, Utsunomiya University, 350 Mine-machi, Utsunomiya 321-8505, Japan
| | - Koichi Yoneyama
- Weed Science Center, Utsunomiya University, 350 Mine-machi, Utsunomiya 321-8505, Japan
| | - Toshiya Muranaka
- Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Yukihiro Sugimoto
- Department of Biofunctional Chemistry, Graduate School of Agricultural Science, Kobe University, 1-1 Rokkodai, Nada-ku, Kobe 657-8501, Japan
| | - Atsushi Okazawa
- Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan Department of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, Osaka 599-8531, Japan
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Vanhaecke M, Van den Ende W, Lescrinier E, Dyubankova N. Isolation and characterization of a pentasaccharide from Stellaria media. JOURNAL OF NATURAL PRODUCTS 2008; 71:1833-6. [PMID: 18855444 DOI: 10.1021/np800274k] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
While classic raffinose family oligosaccharides (RFOs) such as raffinose and stachyose are common in plants, stachyose is absent in the Caryophyllaceae. Instead the tetrasaccharide lychnose α-d-Gal-(1→6)α-d-Glc-(1→2)β-d-Fru-(1→1)α-d-Gal can accumulate. Stellaria media, a representative member of this family, was used to isolate α-d-Gal-(1→6)-[α-d-Gal-(1→4)]α-d-Glc-(1→2)β-d-Fru-(1→1)α-d-Gal, a novel pentasaccharide with a lychnose backbone. Complete NMR characterization using COSY, HSQC, HSQC-TOCSY, HMBC, and NOESY experiments was performed to unequivocally resolve its structure. This is the first report of a natural compound containing a Gal α(1→4)Glc linkage. The trivial name stellariose is proposed for this new pentasaccharide.
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Affiliation(s)
- Mieke Vanhaecke
- Laboratory of Molecular Plant Physiology, Institute of Botany and Microbiology, K. U. Leuven, Kasteelpark Arenberg 31, B-3001 Heverlee, Belgium
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Youcef AD, Courtois JE, Le Dizet P. Les oligosaccharides de trois graines contenant des galactoxyloglucanes (amyloïdes). Carbohydr Res 1978. [DOI: 10.1016/s0008-6215(00)84477-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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