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Hitzemann R, Darakjian P, Walter N, Iancu OD, Searles R, McWeeney S. Introduction to sequencing the brain transcriptome. INTERNATIONAL REVIEW OF NEUROBIOLOGY 2014; 116:1-19. [PMID: 25172469 DOI: 10.1016/b978-0-12-801105-8.00001-1] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
High-throughput next-generation sequencing is now entering its second decade. However, it was not until 2008 that the first report of sequencing the brain transcriptome appeared (Mortazavi, Williams, Mccue, Schaeffer, & Wold, 2008). These authors compared short-read RNA-Seq data for mouse whole brain with microarray results for the same sample and noted both the advantages and disadvantages of the RNA-Seq approach. While RNA-Seq provided exon level resolution, the majority of the reads were provided by a small proportion of highly expressed genes and the data analysis was exceedingly complex. Over the past 6 years, there have been substantial improvements in both RNA-Seq technology and data analysis. This volume contains 11 chapters that detail various aspects of sequencing the brain transcriptome. Some of the chapters are very methods driven, while others focus on the use of RNA-Seq to study such diverse areas as development, schizophrenia, and drug abuse. This chapter briefly reviews the transition from microarrays to RNA-Seq as the preferred method for analyzing the brain transcriptome. Compared with microarrays, RNA-Seq has a greater dynamic range, detects both coding and noncoding RNAs, is superior for gene network construction, detects alternative spliced transcripts, and can be used to extract genotype information, e.g., nonsynonymous coding single nucleotide polymorphisms. RNA-Seq embraces the complexity of the brain transcriptome and provides a mechanism to understand the underlying regulatory code; the potential to inform the brain-behavior-disease relationships is substantial.
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Affiliation(s)
- Robert Hitzemann
- Department of Behavioral Neuroscience, Oregon Health & Science University, Portland, Oregon, USA; Research Service, Veterans Affairs Medical Center, Portland, Oregon, USA.
| | - Priscila Darakjian
- Department of Behavioral Neuroscience, Oregon Health & Science University, Portland, Oregon, USA
| | - Nikki Walter
- Department of Behavioral Neuroscience, Oregon Health & Science University, Portland, Oregon, USA; Research Service, Veterans Affairs Medical Center, Portland, Oregon, USA
| | - Ovidiu Dan Iancu
- Department of Behavioral Neuroscience, Oregon Health & Science University, Portland, Oregon, USA
| | - Robert Searles
- Integrative Genomics Laboratory, Oregon Health & Science University, Portland, Oregon, USA
| | - Shannon McWeeney
- Oregon Clinical and Translational Research Institute, Oregon Health & Science University, Portland, Oregon, USA; Division of Biostatistics, Public Health & Preventative Medicine, Oregon Health & Science University, Portland, Oregon, USA
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Excitotoxic neonatal damage induced by monosodium glutamate reduces several GABAergic markers in the cerebral cortex and hippocampus in adulthood. Int J Dev Neurosci 2009; 27:845-55. [DOI: 10.1016/j.ijdevneu.2009.07.011] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2009] [Revised: 07/07/2009] [Accepted: 07/29/2009] [Indexed: 11/23/2022] Open
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Conti F, Minelli A, Melone M. GABA transporters in the mammalian cerebral cortex: localization, development and pathological implications. ACTA ACUST UNITED AC 2004; 45:196-212. [PMID: 15210304 DOI: 10.1016/j.brainresrev.2004.03.003] [Citation(s) in RCA: 260] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/09/2004] [Indexed: 12/16/2022]
Abstract
The extracellular levels of gamma-aminobutyric acid (GABA), the main inhibitory neurotransmitter in the mammalian cerebral cortex, are regulated by specific high-affinity, Na+/Cl- dependent transporters. Four distinct genes encoding GABA transporters (GATs), named GAT-1, GAT-2, GAT-3, and BGT-1 have been identified using molecular cloning. Of these, GAT-1 and -3 are expressed in the cerebral cortex. Studies of the cortical distribution, cellular localization, ontogeny and relationships of GATs with GABA-releasing elements using a variety of light and electron microscopic immunocytochemical techniques have shown that: (i) a fraction of GATs is strategically placed to mediate GABA uptake at fast inhibitory synapses, terminating GABA's action and shaping inhibitory postsynaptic responses; (ii) another fraction may participate in functions such as the regulation of GABA's diffusion to neighboring synapses and of GABA levels in cerebrospinal fluid; (iii) GATs may play a role in the complex processes regulating cortical maturation; and (iv) GATs may contribute to the dysregulation of neuronal excitability that accompanies at least two major human diseases: epilepsy and ischemia.
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Affiliation(s)
- Fiorenzo Conti
- Dipartimento di Neuroscienze, Sezione di Fisiologia, Università Politecnica delle Marche, Via Tronto 10/A, Torrette di Ancona, I-60020 Ancona, Italy.
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de Barry J, Ghandour MS, Gombos G. Developing rat cerebellum: Glutamine and glutamate influx correlated to the cellular distribution of glutamine synthetase. Int J Dev Neurosci 2003; 1:351-60. [DOI: 10.1016/0736-5748(83)90016-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/25/1983] [Indexed: 11/29/2022] Open
Affiliation(s)
- J. de Barry
- Unité 44 de l'INSERM and Centre de Neurochimie du CNRS; 5, rue Blaise Pascal 67000 Strasbourg France
| | - M. S. Ghandour
- Unité 44 de l'INSERM and Centre de Neurochimie du CNRS; 5, rue Blaise Pascal 67000 Strasbourg France
| | - G. Gombos
- Unité 44 de l'INSERM and Centre de Neurochimie du CNRS; 5, rue Blaise Pascal 67000 Strasbourg France
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Cordero ML, Ortiz JG, Santiago G. High affinity [3H]glutamate uptake systems in normal and audiogenic seizure-susceptible mice. BRAIN RESEARCH. DEVELOPMENTAL BRAIN RESEARCH 1994; 78:44-8. [PMID: 7911746 DOI: 10.1016/0165-3806(94)90007-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Two high affinity sodium-dependent and PDC-sensitive glutamate (GLU) uptake systems are present in a whole brain synaptosomal preparation from adult C57BL/10 SPS/SPS normal mice. System 1 has an apparent Km of 3.65 microM while that of System 2 is 46.8 microM. Glutamate uptake in the normal mice increases gradually during development, displaying a striking peak at postnatal day 15, and decreases rapidly between PN 16 and PN 20 until it reaches adult levels. The developmental pattern of GLU uptake System 1 and System 2 in audiogenic seizure susceptible mice is similar to that described in normal mice. However, there are differences between GLU uptake system 1 and 2 during ontogenesis: (1) System 1 could not be detected until PN 15 while being markedly diminished in adulthood; and (2) GLU uptake by System 2 is increased in adults. In addition, the Umax for System 2 is significantly greater than that of normal mice at PN 2 and PN 15.
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Affiliation(s)
- M L Cordero
- Department of Pharmacology, University of Puerto Rico School of Medicine, San Juan 00936-5067
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Christensen H, Fonnum F. The ontogeny of the uptake systems for glutamate, GABA, and glycine in synaptic vesicles isolated from rat brain. Neurochem Res 1992; 17:457-62. [PMID: 1356244 DOI: 10.1007/bf00969892] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
The ontogeny of the uptake of glutamate, GABA and glycine into synaptic vesicles isolated from rat brain has been investigated. The vesicular uptake of the three amino acids increased with developmental age in parallel with synaptogenesis, indicating a functional role of uptake of the amino acids by synaptic vesicles in the nerve terminals. Uptake of the amino acids by plasma membrane particles (synaptosomes) in brain homogenate showed a somewhat different developmental profile. The uptake of glutamate increased markedly with developmental time, while the uptake of GABA showed only a slight increase. Uptake of glycine by plasma membrane particles was very low and therefore not registered. The observed developmental increase in uptake of glycine by synaptic vesicles isolated from brain, supports previous reports indicating that glycine can be taken up by vesicles from non-glycine terminals.
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Affiliation(s)
- H Christensen
- Norwegian Defence Research Establishment, Division for Environmental Toxicology, Kjeller
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Vorhees CV, Rauch SL, Hitzemann RJ. Prenatal valproic acid exposure decreases neuronal membrane order in rat offspring hippocampus and cortex. Neurotoxicol Teratol 1991; 13:471-4. [PMID: 1921927 DOI: 10.1016/0892-0362(91)90097-g] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Sprague-Dawley rats were administered 0 or 200 mg/kg of valproic acid (VPA) on days 7-18 of gestation. Controls were pair-fed. On postnatal day 28, analyses of brain tissues were performed on enriched neuronal membrane fractions from cerebellum, hippocampus, and cortex for anisotropy using the membrane probe 1,6-diphenyl-1,3,5-hexatriene (DPH). No significant differences in membrane anisotropy were noted in the cerebellum, but a significant reduction in anisotropy in the hippocampus and cortex was observed. This change corresponds to a 3-5 degrees C increase in temperature or that produced by other membrane disordering agents (ethanol, phenytoin). An association between membrane anisotropy and functional effects of prenatal VPA exposure is discussed.
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Affiliation(s)
- C V Vorhees
- Institute for Developmental Research, Children's Hospital Research Foundation, Cincinnati, OH
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Blakely RD, Clark JA, Pacholczyk T, Amara SG. Distinct, developmentally regulated brain mRNAs direct the synthesis of neurotransmitter transporters. J Neurochem 1991; 56:860-71. [PMID: 1671586 DOI: 10.1111/j.1471-4159.1991.tb02002.x] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
The Xenopus laevis oocyte expression system was utilized to define developmental and structural properties of neurotransmitter transporter mRNAs and the pharmacological characteristics of encoded carriers independent of the complexities of brain tissue preparations. Poly(A)+ RNA from dissected brain regions of neonatal and adult rats was microinjected into Xenopus oocytes and the expression of Na(+)-dependent neurotransmitter transporters determined 48 h later. Transport studies conducted with oocytes injected with RNAs derived from juvenile rat tissues indicate a region- and transporter-specific, postnatal increase in mRNA abundance as a major factor in the developmental changes observed for brain high-affinity amino acid uptake systems. Both L-glutamic acid (Glu) and gamma-aminobutyric acid (GABA) uptake systems were detectable by day 3 in postnatal forebrain mRNA and became progressively enriched during the next 2 weeks of forebrain development. In contrast, brainstem Glu and GABA transporter enrichment was 60-70% of adult values by day 3 and exceeded adult levels by day 10. Parallel determinations of L-glutamic acid decarboxylase mRNA abundance during development argue for distinct regulatory influences on mRNAs directing transmitter synthesis and reuptake. Glycine uptake could not be detected at any point of forebrain development and exhibited a gradual postnatal rise to adult levels over the first 3 postnatal weeks of brainstem development. Uptake studies conducted with well-characterized inhibitors of Glu, GABA, dopamine, and choline transport (D-aspartate, nipecotic acid, nomifensine, and hemicholinium-3, respectively) revealed that oocyte transporters encoded by adult rat brain mRNAs retained antagonist sensitivities exhibited by in vitro brain preparations. In addition, a differential regional sensitivity to the Glu transport antagonist dihydrokainate (1 mM) was observed, lending support to previous reports of region-specific Glu transporter subtypes. To determine the structural diversity present among brain transporter mRNAs, poly(A)+ RNA was size-fractionated on linear (10-31%) sucrose density gradients prior to oocyte injection. These experiments revealed two mRNA size classes (2.4-3.0 kb, 4.0-4.5 kb) independently capable of directing the synthesis of Glu, GABA, and glycine transporters. In regions other than the cerebellum, Glu and GABA transporter activities migrated as single, yet distinct, peaks of 4.0-4.5 kb. In contrast, both Glu and GABA transporters exhibited major peaks of activity at 2.5-3.0 kb with size-fractionated cerebellar mRNA. Brainstem glycine uptake exhibited a broad sedimentation profile, with peaks apparent at 2.4 and 4.0 kb. Taken together, these findings indicate previously unappreciated complexity in mRNA structure and regulation which underlies the expression of amino acid neurotransmitter uptake systems in the rodent CNS.
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Affiliation(s)
- R D Blakely
- Section of Molecular Neurobiology, Howard Hughes Medical Institute, New Haven, Connecticut
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9
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Virgili M, Barnabei O, Contestabile A. Regional maturation of neurotransmitter-related and glial markers during postnatal development in the rat. Int J Dev Neurosci 1990; 8:159-66. [PMID: 1970217 DOI: 10.1016/0736-5748(90)90006-n] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Abstract
Neurotransmitter-related (choline acetyltransferase, acetylcholinesterase, glutamate decarboxylase, L-glutamate and GABA high affinity uptake) and glial neurochemical markers (glutamine synthetase, beta-alanine uptake and 2',3' cyclic nucleotide phosphohydrolase) have been quantitatively assayed in various regions of the rat CNS during normal postnatal development: spinal cord, cerebellum, superior colliculus, hippocampus, striatum, visual cortex, frontal sensory-motor cortex and prefrontal cortex. In general, neurochemical markers show an obvious trend toward increasing levels in parallel with brain maturation. However, some relevant exceptions have been observed and discussed. Detailed knowledge of regional neurochemical brain maturation is important since it gives us information concerning some key events of brain development. In addition, this knowledge is the essential pre-requisite for studies aimed at the alteration of specific regional and temporal parameters through experimental manipulation.
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Affiliation(s)
- M Virgili
- Department of Biology, University of Bologna, Italy
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Balcar VJ, Johnston GA. Ontogeny of high affinity uptake of GABA studied in 'minislices' (tissue prisms) of rat cerebral cortex. BRAIN RESEARCH. DEVELOPMENTAL BRAIN RESEARCH 1989; 49:295-9. [PMID: 2805335 DOI: 10.1016/0165-3806(89)90030-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
There has been a considerable discrepancy between the values of Vmax of high affinity uptake of gamma-aminobutyric acid (GABA) obtained in slices and homogenates, respectively, of developing rat cortex. In the present communication, it is suggested that the relatively low values observed in slices of early postnatal cortex might be explained by damage to the immature tissue during the experiment. The possible locations of high affinity uptake of GABA in developing rat cortex are discussed.
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Affiliation(s)
- V J Balcar
- Department of Anatomy, University of Sydney, N.S.W., Australia
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11
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Kontro P, Oja SS. Taurine and GABA release from mouse cerebral cortex slices: potassium stimulation releases more taurine than GABA from developing brain. Brain Res 1987; 465:277-91. [PMID: 3440208 DOI: 10.1016/0165-3806(87)90249-5] [Citation(s) in RCA: 92] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The release of exogenous taurine and gamma-aminobutyric acid (GABA) was studied with slices from the developing mouse cerebral cortex. The spontaneous efflux of GABA increased with the cerebral GABA content during postnatal development, while the spontaneous efflux of taurine was approximately the same in both neonate and adult mice, in spite of a several-fold higher cerebral taurine content in the former. GABA, taurine and their structural analogues caused marked homo- and hetero-trans-stimulation of the release in both adult and developing mice, probably via membrane transport sites. The release was greatly enhanced by both 0.01 mM veratridine and exposure to sodium-free medium, the effects being more pronounced with GABA in the adults and with taurine in the neonates. The excitatory amino acids homocysteate, aspartate and kainate enhanced taurine release particularly from the developing cerebral cortex but were not effective on GABA release in the adults. The potassium stimulation of taurine release had a strikingly slow time course in both adult and developing mice. The responses in GABA release were also fairly slow in the neonates. Potassium stimulation evoked a large release of GABA in adult but not in developing mice. The evoked taurine release was in developing mice several-fold greater than the evoked GABA release, decreasing in magnitude with age. The potassium-stimulated release was only partially calcium dependent, more so with GABA in the adults and with taurine in the neonates, but a high magnesium ion concentration inhibited the release of both amino acids more strongly in the latter age group. Verapamil (0.1 mM) almost abolished the potassium stimulation of GABA release in both adult and neonate mice and was more effective on taurine release in neonate mice. The results suggest that taurine, not GABA, is the major inhibitor of excitability in developing mouse brain.
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Affiliation(s)
- P Kontro
- Department of Biomedical Sciences, University of Tampere, Finland
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12
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Lerner J. Acidic amino acid transport in animal cells and tissues. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. B, COMPARATIVE BIOCHEMISTRY 1987; 87:443-57. [PMID: 3304825 DOI: 10.1016/0305-0491(87)90035-6] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
1. The occurrence and characterization of acidic amino acid transport in the plasma membrane of a variety of cells and tissues of a number of organisms is reviewed. 2. Several cell types, especially in brain, possess both high- and low-affinity transport systems for acidic amino acids. 3. High-affinity systems in brain may function to remove neurotransmitter amino acid from the extracellular environment. 4. Many cell systems for acidic amino acid transport are energized by an inwardly directed Na+ gradient. Moreover, certain cell types, such as rat brain neurons, human placental trophoblast and rabbit and rat kidney cortex epithelium, respond to an outwardly directed K+ gradient as an additional source of energization. This simultaneous action may account for the high accumulation ratios seen with acidic amino acids. 5. Rabbit kidney has been found to have a glutamate-H+ co-transport system which is subject to stimulation by protons in the medium. 6. Acidic amino acid transport in rat brain neurons occurs with a stoichiometric coupling of 1 mol of amino acid to 2 mol of Na+. For rabbit intestine, one Na+ is predicted to migrate for each mol of amino acid. 7. Uptake in rat kidney cortex and in high-K+ dog erythrocytes is electrogenic. However, uptake in rabbit and newt kidney and in rat and rabbit intestine is electroneutral. 8. Na+-independent acidic amino acid transport systems have been described in the mouse lymphocyte, the human fibroblast, the mouse Ehrlich cell and in rat hepatoma cells. 9. In a number of cell systems, D-acidic amino acids have substantial affinity for transport; D-glutamate, in a number of systems, however, appears to have little reactivity. 10. Acidic amino acid transport in some cell systems appears to occur via the "classical" routes (Christensen, Adv. Enzymol. Relat. Areas Mol. Biol. 49, 41-101, 1979). For example, uptake in the Ehrlich cell is partitioned between the Na+-dependent A system (which transports a wide spectrum of neutral amino acids), the Na+-dependent ASC system (which transports alanine, serine, threonine, homoserine, etc.), and the Na+-independent L system (which shows reactivity centering around neutral amino acids such as leucine and phenylalanine). Also, a minor component of uptake in mouse lymphocytes occurs by a route resembling the A system. 11. Human fibroblasts possess a Na+-independent adaptive transport system for cystine and glutamate that is enhanced in activity by cystine starvation.(ABSTRACT TRUNCATED AT 400 WORDS)
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Bablito J, Jover E, Couraud F. Activation of the voltage-sensitive sodium channel by a beta-scorpion toxin in rat brain nerve-ending particles. J Neurochem 1986; 46:1763-70. [PMID: 2422324 DOI: 10.1111/j.1471-4159.1986.tb08494.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Neurotoxins purified from scorpion venoms previously had been divided into two classes according to their binding properties in rat brain synaptosomes. However, the pharmacological action of beta-scorpion toxin (beta-ScTx) on this preparation has not yet been described. In this report we show that a beta-ScTx induced an increase in 22Na+ uptake through synaptosomal voltage-sensitive sodium channels since this stimulation was abolished by tetrodotoxin (TTX). The increase was smaller than with veratridine and no synergy was observed between beta-ScTx and veratridine, as is the case for alpha-scorpion toxin (alpha-ScTx) and veratridine. The effects of alpha- and beta-ScTx were additive and the concentration-effect curves for each type of toxin were not modified by the other, suggesting that these two types of toxins act through distinct and noninteracting receptor sites. This was confirmed by the absence of mutual modification of the equilibrium and kinetic binding properties. beta-ScTx was shown to inhibit the uptake and to stimulate the release of [3H]gamma-aminobutyric acid. These effects were blocked by TTX, and no synergy was observed with veratridine. It was concluded that all these effects are mediated by the activation of voltage-sensitive sodium channels induced by the binding of beta-ScTx to a receptor site (site 4) distinct from those for other neurotoxins acting on sodium channels.
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Rauch SL, Hitzemann RJ. Developmental changes in synaptic membrane order: a comparison of regions in the rat brain. Brain Res 1986; 391:221-7. [PMID: 3697777 DOI: 10.1016/0165-3806(86)90286-5] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Developmental changes in synaptic membrane order were followed in 5 regions of the rat brain, the cortex (Cx), cerebellum (Cb), brainstem (BS), lateral subcortex (LSCx) and midline subcortex (MSCx). Membrane order was assessed by the fluorescence polarization technique, using 1,6-diphenyl-1,3,5-hexatriene (DPH) as the probe. The results illustrate that the developmental increase in membrane order proceeds from caudal to rostral brain regions. Thus, at the earliest time point examined (day 3) steady-state anisotropy (rs) in the BS was significantly higher than in the Cx and reached adult values by day 14 while the Cx values were still significantly less than the adult value even at day 30. The thermotropic behavior of the membranes was investigated over the range of 20-37 degrees C. The Arrhenius slopes among the Cx, BS, LSCx and MSCx were similar across all ages studied, suggesting that the developmental increase in order primarily results from a change in entropy. In contrast, the Arrhenius slopes for the Cb increase greater than 100% during development, suggesting that a change in enthalpy is important for the increase in membrane order. Multilamellar liposomes prepared from membrane lipid extracts generally showed the same developmental changes in order as the intact membranes. These data indicate that the increase in membrane order results from a marked change in bulk lipid composition rather than a secondary lipid matrix change (e.g. in membrane asymmetry) and/or from the developmental increase in the protein/lipid ratio.
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Hitzemann RJ, Harris RA. Developmental changes in synaptic membrane fluidity: a comparison of 1,6-diphenyl-1,3,5-hexatriene (DPH) and 1-[4-(trimethylamino)phenyl]-6-phenyl-1,3,5-hexatriene (TMA-DPH). Brain Res 1984; 316:113-20. [PMID: 6733531 DOI: 10.1016/0165-3806(84)90014-2] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Cortical synaptic plasma membranes were prepared from rats 3, 7, 10, 14, 21, 28 and 120 days of age. Developmental changes in the fluidity of these membranes were assessed using fluorescence polarization techniques. 1,6-Diphenyl-1,3,5-hexatriene (DPH), a probe of the membrane interior, showed a marked developmental increase in polarization, suggesting a developmental decrease in fluidity. The magnitude of the change from day 3 to the adult was the equivalent of lowering the temperature 7 degrees C. The developmental change in DPH polarization was maintained in liposomes (multilamellar vesicles) prepared from membrane total lipid extracts. In contrast to DPH, 1-[4-(trimethylamino)phenyl]6-phenyl-1,3,5-hexatriene (TMA-DPH), a probe of the membrane surface reported no significant developmental effect on polarization for intact membranes; however, TMA-DPH did report a significant increase in polarization for the total lipid extract liposomes. For the intact membranes, both cis- and trans-parinarate, fluorescent probes of the mid-region of the acyl chains, reported significant developmental increases in polarization. The role of gangliosides in the developmental regulation of fluidity was examined. Gangliosides did not appear to play a role in the developmental changes, but they do have a significant effect (increased polarization) on the membrane surface as reported by TMA-DPH. Fluorescence lifetime and heterogeneity analyses were performed for DPH. There was a small but significant increase in probe lifetime during development. Thus, polarization measurements alone underestimated the increases in membrane order. In an attempt to amplify the differences in membrane organization between the developing and adult membranes, we examined the effects of the membrane perturbant ethanol, on DPH polarization at the different ages. No developmental effect on the ethanol-induced fluidization of synaptic membranes was observed.
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GABA and glutamate fluxes in developing nerve endings. Neurochem Int 1984; 6:133-9. [DOI: 10.1016/0197-0186(84)90038-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/1983] [Accepted: 06/30/1983] [Indexed: 11/17/2022]
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Kvale I, Fosse VM, Fonnum F. Development of neurotransmitter parameters in lateral geniculate body, superior colliculus and visual cortex of the albino rat. Brain Res 1983; 283:137-45. [PMID: 6133594 DOI: 10.1016/0165-3806(83)90170-0] [Citation(s) in RCA: 61] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
The postnatal development of some neurotransmitter parameters was measured in lateral geniculate body, superior colliculus and visual cortex of the rat. The following parameters were studied: (i) high-affinity uptake of L-glutamate or D-aspartate as markers for glutamergic neurons; (ii) high-affinity uptake of GABA, which reflects both glial and neuronal uptake of GABA; (iii) HA beta-alanine uptake as a marker for accumulation of GABA in glial structures; (iv) activity of glutamic acid decarboxylase which reflects GABAergic neurons; and (v) activity of choline acetyltransferase as a cholinergic marker. Km and Vmax were determined for high-affinity uptake of glutamate and GABA in newborn and adult animals. The possible glial influence on the uptake during development is discussed. In lateral geniculate body and visual cortex the HA glutamate uptake showed increasing activity from birth to adulthood, whereas in superior colliculus, the uptake was higher at birth, reaching a small significant peak after 12 days of age, and was then reduced to adult level. Km showed no such change between neonatal and adult animals. At birth, high-affinity GABA-uptake was similar to the adult level in superior colliculus and lateral geniculate body. In visual cortex, the uptake of GABA was 50% of adults. However, on day 15, the GABA uptake showed 2 to 3-fold higher activity in all regions when compared to adult level. Km for GABA uptake in neonatals and adults differed only in lateral geniculate body. High affinity uptake of beta-alanine was 50-80% lower in adults than in newborn rats. Glutamate decarboxylase activity, however, increased continuously in all 3 regions examined. This was true also for choline acetyltransferase.
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18
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Hitzemann RJ, Johnson DA. Developmental changes in synaptic membrane lipid composition and fluidity. Neurochem Res 1983; 8:121-31. [PMID: 6856021 DOI: 10.1007/bf00963913] [Citation(s) in RCA: 57] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Synaptic membrane enriched fractions were prepared from 7 and 14 day and adult cortical nerve endings. (a) The levels of synaptic membrane phosphatidylcholine decrease 19% during development while the levels of ethanolamine phosphoglycerides increase 21%. (b) On day 7, desmosterol accounts for 33% of the total membrane sterols. With maturity, the desmosterol disappears and the molar sterol/lipid P ratio increases 56%. (c) The fatty acid composition of the membranes change during development. 16:0 decreases 36% while 18:1 increases 49%. 16:1, a minor component of adult membranes, is found in significant quantities in pup membranes. 22:6 (n-3) increases 34% during development while 22:5 (n-6) decreases 59%. (d) The microviscosity of synaptic membranes, as measured by the fluorescence depolarization technique, increases during development. This effect is observed in both intact membranes and bilayers prepared from lipid extracts of the membrane.
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Hitzemann R, Mark C, Panini A. Effects of free fatty acids, ethanol and development on gamma-aminobutyric acid and glutamate fluxes in rat nerve endings. Biochem Pharmacol 1982; 31:4039-44. [PMID: 6130769 DOI: 10.1016/0006-2952(82)90653-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
The effects of type A (cis-unsaturated) and type B (trans-unsaturated and saturated) fatty acids, 1% and 3% ethanol (v/v), and development (7 days) on the thermodynamics of glutamate and gamma-aminobutyric acid (GABA) transport into cortical rat brain nerve endings were examined. The effects of the various manipulations, which are known to affect membrane fluidity, may be summarized. Three percent ethanol and oleic acid increased delta S degrees and delta S+ for glutamate transport and decreased delta H degrees and delta H+. Type B fatty acids had the opposite effects. In comparison to glutamate transport, GABA transport was less affected by the various manipulations and showed less specificity in terms of the fatty acid effects. Similarly, the effects of development on the thermodynamic parameters for glutamate and GABA transport were not consistent. Glutamate transport into 7-day nerve endings showed thermodynamic behavior similar to that seen when type A fatty acids were incorporated into adult nerve endings. In contrast, GABA transport into 7-day nerve endings had the character of adult nerve endings into which type B fatty acids were incorporated.
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Leung TK, Lai JC, Tricklebank M, Davison AN, Lim L. Chronic manganese treatment of rats alters synaptosomal uptake of dopamine and the behavioural response to amphetamine administration. J Neurochem 1982; 39:1496-9. [PMID: 7119805 DOI: 10.1111/j.1471-4159.1982.tb12599.x] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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Abstract
Phospholipid methylation was studied in cortical synaptosomes prepared from 7 and 14 day and adult rat brain. Using varying concentrations of [3H] S-adenosylmethionine, Km and Vmax values were determined for the formation of [3H] phosphatidylmonomethylethanolamine (PME), [3H] phosphatidyl-dimethylethanolamine and [3H] phosphatidylcholine (PC). At 25 degree C, the Km values for the formation of all three products, significantly decreased with development. Increasing the temperature to 37 degree C increased the Km values in the 14 day and adult but not the 7 day preparation. The Vmax values at 25 degree C were highest at 7 and 14 days, depending on the product and then decreased in the adult. At 37 degree C, the Vmax values were highest in the 14 day preparation. The overall results are discussed in terms of the developmentally regulated decrease in both synaptic membrane PC and membrane fluidity.
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SAITO KI, GOTO M, FUKUDA H. POSTNATAL DEVELOPMENT OF THE GABA SYSTEM IN THE RAT SPINAL CORD. ACTA ACUST UNITED AC 1982. [DOI: 10.1016/s0021-5198(19)52710-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Hitzemann R. Developmental changes in the fatty acids of synaptic membrane phospholipids: effect of protein malnutrition. Neurochem Res 1981; 6:935-47. [PMID: 6798482 DOI: 10.1007/bf00965025] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
The acyl-linked fatty acid composition of the major phospholipid species in rat cortical synaptic membranes was determined at various stages of development. For most species there was a decrease during development in the short chain saturated fatty acids, 14:0 and 16:0, an increase in 18:0 and 22:6 (n-3) and an increase in ratio of 22:6 (n-3)/22:5 (n-6). Pups were protein deprived by feeding the dams a 12% casein diet as compared to the 24% casein control diet. Protein malnutrition markedly affected the composition of acyl-linked fatty acids in the synaptic membranes. The increases in the ratio of 22:6 (n-3)/22:5 (n-6) fatty acids were especially compromised.
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Abstract
In the rat cortex and striatum, glutamate decarboxylase, a marker for GABAergic nerve terminals, increased almost linearly for the first postnatal month, in agreement with previous reports. High affinity GABA and glutamate transport appeared to develop earlier, reaching, respectively, 170-190% and 72-80% in adult rates by the fifteenth postnatal day. Glial and neuronal uptakes of GABA in infant and adult tissues were investigated using beta-alanine and cis-3-aminocyclohexane-carboxylic acid. The relatively high striatal uptake of GABA observed in 2-day-old rats was found to be mainly due to early development of neuronal rather than glial transport in this region. Both neuronal and glial uptake, however, contributed equally to the enhanced uptake of GABA obtained in both regions at day 15. Neuron/glia ratios were estimated to increase by more than 12-fold in the cortex, and about 4-fold in the striatum from newborns to adults. The present results also indicate that there may exist in the immature striatum some glioblasts which might accumulate beta-alanine but not GABA. The 2-fold developmental increase in ornithine aminotransferase activity is consistent with the hypothesis that this enzyme may be enriched in glutamatergic neurons.
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Wong PC, Lai JC, Lim L, Davison AN. Selective inhibition of L-glutamate and gammaaminobutyrate transport in nerve ending particles by aluminium, manganese, and cadmium chloride. J Inorg Biochem 1981; 14:253-60. [PMID: 6114986 DOI: 10.1016/s0162-0134(00)80005-7] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
AlCl3, MnCl2, and CdCl2 inhibited the rates of accumulation of [14C] L-glutamate and [3H] gammaaminobutyrate (GABA) in purified rat forebrain nerve-ending particles in a dose-dependent fashion. The concentrations that would give 50% inhibition (IC50) of GABA transport were 316 muM, 7.4 mM, and 1.4 mM, respectively. Ca2+ (1 mM) enhanced the inhibitory effect of Al3+ (IC50 decreased to 149 muM) but antagonized that of Mn2+ (IC50 = 10 mM) and Cd2+ (IC50 = 2.1 mM). For glutamate transport 1 mM Ca2+ changed the IC50 values from 299 to 224 micron for Al3+, 7.1 to 10 mM for Mn2+, and 2 to 3 mM for Cd2+. In contrast, the rates of accumulation of [14C] 2-deoxy-glucose and [3H] L-phenylalanine were mostly unaffected by these metal ions. The results indicate that Al3+, Mn2+, and Cd2+ exerted selective and differential effects on the transport systems of neurotransmitter substances in the synaptosomal membrane.
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Pastuszko A, Wilson DF, Erecińska M. Net uptake of gamma-aminobutyric acid by a high-affinity system of rat brain synaptosomes. Proc Natl Acad Sci U S A 1981; 78:1242-4. [PMID: 6940139 PMCID: PMC319984 DOI: 10.1073/pnas.78.2.1242] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
Abstract
Rat brain synaptosomes isolated on discontinuous Ficoll gradient carry out rapid net uptake of gamma-aminobutyric acid through a high-affinity system (Km = 6.25 microM; Vmax = 1.2 nmol/min per mg of protein). The uptake of the labeled neurotransmitter is dependent on sodium concentration and is abolished by addition of 40 microM veratridine or 0.5 mM 2,4-diaminobutyric acid. Homoexchange in this preparation accounts for less than 10% of the measured uptake of gamma-amino[14C]butyric acid. It is concluded that the high-affinity transport exhibits properties characteristic of a system that is responsible for the rapid removal of gamma-aminobutyric acid from the synaptic cleft after neuronal transmission.
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