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Dong S, Li R, Zhou K, Wei Y, Li J, Cheng M, Chen P, Hu X. Response of humification process to fungal inoculant in corn straw composting with two different kinds of nitrogen sources. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 946:174461. [PMID: 38964380 DOI: 10.1016/j.scitotenv.2024.174461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Revised: 06/24/2024] [Accepted: 07/01/2024] [Indexed: 07/06/2024]
Abstract
Inoculation is widely used in composting to improve the mineralization process, however, the link of fungal inoculant to humification is rarely proposed. The objective of this study was to investigate the effect of compound fungal inoculation on humification process and fungal community dynamics in corn straw composting with two different kinds of nitrogen sources [pig manure (PM) and urea (UR)]. Structural equation modeling and random forest analysis were conducted to identify key fungi and explore the fungi-mediated humification mechanism. Results showed that fungal inoculation increased the content of humic acids in PM and UR by 71.76 % and 53.01 % compared to control, respectively. High-throughput sequencing indicated that there were more key fungal genera for lignin degradation in PM especially in the later stage of composting, but a more complex fungal (genera) connections with lower humification degree was found in UR. Network analysis and random forest suggested that inoculation promoted dominant genus such as Coprinus, affecting lignocellulose degradation. Structural equation modeling indicated that fungal inoculation could promote humification by direct pathway based on lignin degradation and indirect pathway based on stimulating the indigenous microbes such as Scedosporiu and Coprinus for the accumulation of carboxyl and polyphenol hydroxyl groups. In summary, fungal inoculation is suitable to be used combining with complex nitrogen source such as pig manure in straw composting.
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Affiliation(s)
| | - Ruoqi Li
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China
| | - Kaiyun Zhou
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China
| | - Yuquan Wei
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China.
| | - Jun Li
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China
| | - Meidi Cheng
- College of Chemistry and Chemical Engineering, Yantai University, Yantai 264005, China
| | - Peizhen Chen
- Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, Tianjin 300191, China
| | - Xiaomei Hu
- College of Life Science, Northeast Agricultural University, Harbin 150030, China.
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2
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Guo H, Li Z, Sun X, Xing M. Impact of earthworms on suppressing dissemination of antibiotic resistance genes during vermicomposting treatment of excess sludge. BIORESOURCE TECHNOLOGY 2024; 406:130991. [PMID: 38885722 DOI: 10.1016/j.biortech.2024.130991] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Revised: 06/13/2024] [Accepted: 06/14/2024] [Indexed: 06/20/2024]
Abstract
Earthworms play a crucial role in suppressing the dissemination of antibiotic resistance genes (ARGs) during vermicomposting. However, there is still a lack of how earthworms influence the spread of ARGs. To address this gap, a microcosm experiment was conducted, incorporating earthworms and utilizing metagenomics and quantitative PCR to assess the impact of earthworms on microbial interactions and the removal of plasmid-induced ARGs. The findings revealed that vermicomposting led to a reduction in the relative abundance of ARGs by altering microbial communities and interactions. Significantly, vermicomposting demonstrated an impressive capability, reducing 92% of ARGs donor bacteria and impeding the transmission of 94% of the RP4 plasmid. Furthermore, through structural equation model analysis, it was determined that mobile genetic elements and environmental variables were the primary influencers of ARG reduction. Overall, this study offers a fresh perspective on the effects of vermicomposting and its potential to mitigate the spread of ARGs.
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Affiliation(s)
- Hongan Guo
- Key Laboratory of Yangtze Water Environment for Ministry of Education, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, China
| | - Zhan Li
- Key Laboratory of Yangtze Water Environment for Ministry of Education, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, China
| | - Xiaojie Sun
- Guangxi Key Laboratory of Environmental Pollution Control Theory and Technology, Guilin University of Technology, Guilin 541004, China
| | - Meiyan Xing
- Key Laboratory of Yangtze Water Environment for Ministry of Education, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, China.
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Jiang K, Jiang D, Li S, Guo Z, Zhao L, Wang J, Hao X, Bai L, Qiu S, Kang B. Impacts of mixed ferrous sulfate-biochar additives on humification and bacterial community during electric field-assisted aerobic composting. BIORESOURCE TECHNOLOGY 2024; 404:130901. [PMID: 38801959 DOI: 10.1016/j.biortech.2024.130901] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Revised: 05/24/2024] [Accepted: 05/24/2024] [Indexed: 05/29/2024]
Abstract
This study assessed the impact of nine mixed ferrous sulfates and biochars on electric field-assisted aerobic composting (EAC), focusing on the spectroscopy of dissolved organic matter (DOM) and microbial communities. Adding 1.05% ferrous sulfate and 5.25% biochar to EAC increased the specific ultraviolet absorbances at 254 and 280 nm by 142.3% and 133.9% on day 35, respectively. This ratio accelerated the early response of carboxyl groups (-COOH) and lignin (CꘌC), enhancing the relative abundance of Thermobifida (4.0%) and Thermopolyspora (4.3%). The condition contributed to humus precursor formation on day 5, increasing the maximum fluorescence intensity of the humus-like component by 74.2% compared to the control on day 35. This study is the first to develop a combined and efficient organic and inorganic additive by multiple-variable experimentation for DOM humification. Consequently, it optimizes EAC for solid waste recycling.
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Affiliation(s)
- Kunhong Jiang
- State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China; Key Laboratory of Livestock and Poultry Multi-omics, Ministry of Agriculture and Rural Affairs, Sichuan Agricultural University, P.R. China; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China
| | - Dongmei Jiang
- State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China; Key Laboratory of Livestock and Poultry Multi-omics, Ministry of Agriculture and Rural Affairs, Sichuan Agricultural University, P.R. China; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China.
| | - Shuo Li
- State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China; Key Laboratory of Livestock and Poultry Multi-omics, Ministry of Agriculture and Rural Affairs, Sichuan Agricultural University, P.R. China; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China
| | - Zhenzhen Guo
- State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China; Key Laboratory of Livestock and Poultry Multi-omics, Ministry of Agriculture and Rural Affairs, Sichuan Agricultural University, P.R. China; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China
| | - Liangbin Zhao
- State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China; Key Laboratory of Livestock and Poultry Multi-omics, Ministry of Agriculture and Rural Affairs, Sichuan Agricultural University, P.R. China; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China
| | - Jie Wang
- State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China; Key Laboratory of Livestock and Poultry Multi-omics, Ministry of Agriculture and Rural Affairs, Sichuan Agricultural University, P.R. China; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China
| | - Xiaoxia Hao
- State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China; Key Laboratory of Livestock and Poultry Multi-omics, Ministry of Agriculture and Rural Affairs, Sichuan Agricultural University, P.R. China; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China
| | - Lin Bai
- State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China; Key Laboratory of Livestock and Poultry Multi-omics, Ministry of Agriculture and Rural Affairs, Sichuan Agricultural University, P.R. China; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China
| | - Shixiu Qiu
- Institute of Animal Husbandry, Chengdu Academy of Agriculture and Forestry Sciences, P.R. China
| | - Bo Kang
- State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China; Key Laboratory of Livestock and Poultry Multi-omics, Ministry of Agriculture and Rural Affairs, Sichuan Agricultural University, P.R. China; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, P.R. China.
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4
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Escobar M, Ji J, Wang Y, Feng M, Bao C, Ma J, Cui S, Zang S, Zhang J, Zhang W, Chen G, Chen H. Effect of thermal treatment of illite on the bioavailability of copper and zinc in the aerobic composting of pig manure with corn straw. Front Microbiol 2024; 15:1411251. [PMID: 38903784 PMCID: PMC11187081 DOI: 10.3389/fmicb.2024.1411251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Accepted: 05/27/2024] [Indexed: 06/22/2024] Open
Abstract
The large amount of various types of heavy metals in animal manure applied to agricultural field has caused severe threat to the ecosystems of soil environments. In this study, the effect of thermal treatment of illite on the bioavailability of copper (Cu) and zinc (Zn) in the aerobic composting of pig manure with corn straw biochar was investigated. The objectives of this study were to characterize the variations in the bioavailability of Cu and Zn in the aerobic composting of pig manure added with illite treated with high temperatures and to identify the relatively dominant microbes involved in the formation of humus and passivation of heavy metals in pig manure composting based on 16S rRNA high-throughput sequencing analysis. The results showed that in comparison with the raw materials of pig manure, the bioavailability of Zn and Cu in the control and three experimental composting groups, i.e., group I (with untreated illite), group I-2 (with illite treated under 200°C), and group I-5 (with illite treated under 500°C), was decreased by 27.66 and 71.54%, 47.05 and 79.80%, 51.56 and 81.93%, and 58.15 and 86.60%, respectively. The results of 16S rRNA sequencing analysis revealed that in the I-5 group, the highest relative abundance was detected in Fermentimonas, which was associated with the degradation of glucose and fructose, and the increased relative abundances were revealed in the microbes associated with the formation of humus, which chelated with Zn and Cu to ultimately reduce the bioavailability of heavy metals and their biotoxicity in the compost. This study provided strong experimental evidence to support the application of illite in pig manure composting and novel insights into the selection of appropriate additives (i.e., illite) to promote humification and passivation of different heavy metals in pig manure composting.
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Affiliation(s)
- Maia Escobar
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
| | - Jiaoyang Ji
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
| | - Yueru Wang
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
| | - Meiqin Feng
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
| | - Changjie Bao
- Key Laboratory of Wetland Ecology and Environment, State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
| | - Jianxun Ma
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
| | - Shijia Cui
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
| | - Sihan Zang
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
| | - Jinpeng Zhang
- Key Laboratory of Wetland Ecology and Environment, State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
| | - Wei Zhang
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
| | - Guang Chen
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
| | - Huan Chen
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Jilin Agricultural University, Changchun, China
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Jiang L, Dai J, Wang L, Chen L, Zeng G, Liu E, Zhou X, Yao H, Xiao Y, Fang J. Ca(H 2PO 4) 2 and MgSO 4 activated nitrogen-related bacteria and genes in thermophilic stage of compost. Appl Microbiol Biotechnol 2024; 108:331. [PMID: 38734749 PMCID: PMC11088556 DOI: 10.1007/s00253-024-13167-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 04/21/2024] [Accepted: 05/02/2024] [Indexed: 05/13/2024]
Abstract
This study was conducted to investigate the effects of Ca(H2PO4)2 and MgSO4 on the bacterial community and nitrogen metabolism genes in the aerobic composting of pig manure. The experimental treatments were set up as control (C), 1% Ca(H2PO4)2 + 2% MgSO4 (CaPM1), and 1.5% Ca(H2PO4)2 + 3% MgSO4 (CaPM2), which were used at the end of composting for potting trials. The results showed that Ca(H2PO4)2 and MgSO4 played an excellent role in retaining nitrogen and increasing the alkali-hydrolyzed nitrogen (AN), available phosphorus (AP), and available potassium (AK) contents of the composts. Adding Ca(H2PO4)2 and MgSO4 changed the microbial community structure of the compost. The microorganisms associated with nitrogen retention were activated. The complexity of the microbial network was enhanced. Genetic prediction analysis showed that the addition of Ca(H2PO4)2 and MgSO4 reduced the accumulation of nitroso-nitrogen and the process of denitrification. At the same time, despite the reduction of genes related to nitrogen fixation, the conversion of ammonia to nitrogenous organic compounds was promoted and the stability of nitrogen was increased. Mantel test analysis showed that Ca(H2PO4)2 and MgSO4 can affect nitrogen transformation-related bacteria and thus indirectly affect nitrogen metabolism genes by influencing the temperature, pH, and organic matter (OM) of the compost and also directly affected nitrogen metabolism genes through PO43- and Mg2+. The pot experiment showed that composting with 1.5% Ca(H2PO4)2 + 3% MgSO4 produced the compost product that improved the growth yield and nutrient content of cilantro and increased the fertility of the soil. In conclusion, Ca(H2PO4)2 and MgSO4 reduces the loss of nitrogen from compost, activates nitrogen-related bacteria and genes in the thermophilic phase of composting, and improves the fertilizer efficiency of compost products. KEY POINTS: • Ca(H2PO4)2 and MgSO4 reduced the nitrogen loss and improved the compost effect • Activated nitrogen-related bacteria and altered nitrogen metabolism genes • Improved the yield and quality of cilantro and fertility of soil.
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Affiliation(s)
- Lihong Jiang
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China
- Hunan Engineering Laboratory for Pollution Control and Waste, Utilization in Swine Production, Changsha, 410128, China
| | - Jiapeng Dai
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China
| | - Lutong Wang
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China
| | - Liang Chen
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China
| | - Guangxi Zeng
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China
| | - Erlun Liu
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China
| | - Xiangdan Zhou
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China
| | - Hao Yao
- Board of Directors Department, Changsha IMADEK Intelligent Technology Company Limited, Changsha, 410137, China
| | - Yunhua Xiao
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China.
- Hunan Engineering Laboratory for Pollution Control and Waste, Utilization in Swine Production, Changsha, 410128, China.
| | - Jun Fang
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China.
- Hunan Engineering Laboratory for Pollution Control and Waste, Utilization in Swine Production, Changsha, 410128, China.
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Zhou Z, Shi X, Bhople P, Jiang J, Chater CCC, Yang S, Perez-Moreno J, Yu F, Liu D. Enhancing C and N turnover, functional bacteria abundance, and the efficiency of biowaste conversion using Streptomyces-Bacillus inoculation. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 358:120895. [PMID: 38626487 DOI: 10.1016/j.jenvman.2024.120895] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 03/01/2024] [Accepted: 04/10/2024] [Indexed: 04/18/2024]
Abstract
Microbial inoculation plays a significant role in promoting the efficiency of biowaste conversion. This study investigates the function of Streptomyces-Bacillus Inoculants (SBI) on carbon (C) and nitrogen (N) conversion, and microbial dynamics, during cow manure (10% and 20% addition) and corn straw co-composting. Compared to inoculant-free controls, inoculant application accelerated the compost's thermophilic stage (8 vs 15 days), and significantly increased compost total N contents (+47%) and N-reductase activities (nitrate reductase: +60%; nitrite reductase: +219%). Both bacterial and fungal community succession were significantly affected by DOC, urease, and NH4+-N, while the fungal community was also significantly affected by cellulase. The contribution rate of Cupriavidus to the physicochemical factors of compost was as high as 83.40%, but by contrast there were no significantly different contributions (∼60%) among the top 20 fungal genera. Application of SBI induced significant correlations between bacteria, compost C/N ratio, and catalase enzymes, indicative of compost maturation. We recommend SBI as a promising bio-composting additive to accelerate C and N turnover and high-quality biowaste maturation. SBI boosts organic cycling by transforming biowastes into bio-fertilizers efficiently. This highlights the potential for SBI application to improve plant growth and soil quality in multiple contexts.
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Affiliation(s)
- Ziyan Zhou
- The Germplasm Bank of Wild Species & Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China
| | - Xiaofei Shi
- The Germplasm Bank of Wild Species & Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China
| | - Parag Bhople
- Crops, Environment, And Land Use Department, Environment Research Centre, Teagasc, Johnstown Castle, Wexford, Y35TC98, Ireland
| | - Jishao Jiang
- School of Environment, Henan Normal University, Xinxiang, Henan, 453007, China
| | - Caspar C C Chater
- Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3AE, UK; Plants, Photosynthesis, and Soil, School of Biosciences, University of Sheffield, Sheffield, S10 2TN, UK
| | - Shimei Yang
- The Germplasm Bank of Wild Species & Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China
| | - Jesus Perez-Moreno
- Colegio de Postgraduados, Campus Montecillo, Edafologia, Texcoco, 56230, Mexico
| | - Fuqiang Yu
- The Germplasm Bank of Wild Species & Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China.
| | - Dong Liu
- The Germplasm Bank of Wild Species & Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China.
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Lin N, Zha X, Cai J, Li Y, Wei L, Wu B. Investigating fungal community characteristics in co-composted cotton stalk and various livestock manure products. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:26141-26152. [PMID: 38491241 DOI: 10.1007/s11356-024-32909-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Accepted: 03/10/2024] [Indexed: 03/18/2024]
Abstract
Agricultural wastes, comprising cotton straw and livestock manure, can be effectively managed through aerobic co-composting. Nevertheless, the quality and microbial characteristics of co-composting products from different sources remain unclear. Therefore, this study utilized livestock manure from various sources in Xinjiang, China, including herbivorous sheep manure (G), omnivorous pigeon manure (Y), and pigeon-sheep mixture (GY) alongside cotton stalks, for a 40-day co-composting process. We monitored physicochemical changes, assessed compost characteristics, and investigated fungal community. The results indicate that all three composts met established composting criteria, with compost G exhibiting the fastest microbial growth and achieving the highest quality. Ascomycota emerged as the predominant taxon in three compost products. Remarkably, at the genus level, the biomarker species for G, Y, and GY are Petromyces and Cordyceps, Neurospora, and Neosartorya, respectively. Microorganisms play a pivotal role in organic matter degradation, impacting nutrient composition, demonstrating significant potential for the decomposition and transformation of compost components. Redundancy analysis indicates that potassium, total organic carbon, and C:N are key factors influencing fungal communities. This study elucidates organic matter degradation in co-composting straw and livestock manure diverse sources, optimizing treatment for efficient agricultural waste utilization and sustainable practices.
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Affiliation(s)
- Ning Lin
- Xinjiang Biomass Solid Waste Resources Technology and Engineering Center, College of Chemistry and Environmental Science, Kashi University, Kashi, 844000, China
| | - Xianghao Zha
- Xinjiang Biomass Solid Waste Resources Technology and Engineering Center, College of Chemistry and Environmental Science, Kashi University, Kashi, 844000, China
| | - Jixiang Cai
- Xinjiang Biomass Solid Waste Resources Technology and Engineering Center, College of Chemistry and Environmental Science, Kashi University, Kashi, 844000, China
| | - Youwen Li
- Xinjiang Biomass Solid Waste Resources Technology and Engineering Center, College of Chemistry and Environmental Science, Kashi University, Kashi, 844000, China
| | - Lianghuan Wei
- Xinjiang Biomass Solid Waste Resources Technology and Engineering Center, College of Chemistry and Environmental Science, Kashi University, Kashi, 844000, China
| | - Bohan Wu
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642, China.
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Kou B, Yu T, Tang J, Zhu X, Yuan Y, Tan W. Kitchen compost-derived humic acid application promotes ryegrass growth and enhances the accumulation of Cd: An analysis of the soil microenvironment and rhizosphere functional microbes. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 919:170879. [PMID: 38354798 DOI: 10.1016/j.scitotenv.2024.170879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2023] [Revised: 02/06/2024] [Accepted: 02/08/2024] [Indexed: 02/16/2024]
Abstract
Phytoremediation is an environmentally friendly and safe approach for remediating environments contaminated with heavy metals. Humic acid (HA) has high biological activity and can effectively complex with heavy metals. However, whether HA affects available Cd storage and the Cd accumulation ability of plants by altering the soil microenvironment and the distribution of special functional microorganisms remains unclear. Here, we investigated the effects of applying kitchen compost-derived HA on the growth and Cd enrichment capacity of ryegrass (Lolium perenne L.). Additionally, the key role of HA in regulating the structure of rhizosphere soil bacterial communities was identified. HA promoted the growth of perennial ryegrass and biomass accumulation and enhanced the Cd enrichment capacity of ryegrass. The positive effect of HA on the soil microenvironment and rhizosphere bacterial community was the main factor promoting the growth of ryegrass, and this was confirmed by the significant positive correlation between the ryegrass growth index and the content of SOM, AP, AK, and AN, as well as the abundance of rhizosphere growth-promoting bacteria such as Pseudomonas, Steroidobacter, Phenylobacterium, and Caulobacter. HA passivated Cd and inhibited the translocation capacity of ryegrass. The auxiliary effect of resistant bacteria on plants drove the absorption of Cd by ryegrass. In addition, HA enhanced the remediation of Cd-contaminated soil by ryegrass under different Cd levels, which indicated that kitchen compost-derived HA could be widely used for the phytoremediation of Cd-contaminated soil. Generally, our findings will aid the development of improved approaches for the use of kitchen compost-derived HA for the remediation of Cd-contaminated soil.
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Affiliation(s)
- Bing Kou
- State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing 100012, China; College of Urban and Environmental Science, Northwest University, Xi'an 710127, China
| | - Tingqiao Yu
- International Education College, Beijing Vocational College of Agriculture, Beijing 102442, China
| | - Jun Tang
- State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
| | - Xiaoli Zhu
- College of Urban and Environmental Science, Northwest University, Xi'an 710127, China
| | - Ying Yuan
- State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing 100012, China.
| | - Wenbing Tan
- State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
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Huang J, Jiang Z, Li A, Jiang F, Tang P, Cui J, Feng W, Fu C, Lu Q. Role of keystone drives polycyclic aromatic hydrocarbons degradation and humification especially combined with aged contaminated soil in co-composting. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 354:120323. [PMID: 38417356 DOI: 10.1016/j.jenvman.2024.120323] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2023] [Revised: 01/08/2024] [Accepted: 02/08/2024] [Indexed: 03/01/2024]
Abstract
Accumulation of persistent organic pollutants polycyclic aromatic hydrocarbons (PAHs) in soil has become a global problem. Composting is considered one of the more economical methods of soil remediation and is important for the resourceful use of wastes. Agroforestry waste is produced in huge amounts and is utilized at low rates, hence there is an urgent need to manage it. Here, leaf (LVS) or rice straw (SVS) was co-composting with aged contaminated soil to investigate bacteria interaction to PAHs degradation and humus formation. The degradation rate of high molecular weight PAHs (HMW-PAHs) in LVS and SVS reached 58.9% and 52.5%, and the low molecular weight PAHs (LMW-PAHs) were 77.5% and 65%. Meanwhile, the humus increased by 44.8% and 60.5% in LVS and SVS at the end of co-composting. The topological characteristics and community assembly of the bacterial community showed that LVS had higher complexity and more keystones than SVS, suggesting that LVS might more beneficial for the degradation of PAHs. The stability of the co-occurrence network and stochastic processes (dispersal limitation) dominated community assembly made SVS beneficial for humus formation. Mantel test and structural equation models indicated that the transformation of organic matter was important for PAHs degradation and humus formation. Degradation of HMW-PAHs led to bacterial succession, which affected the formation of precursors and ultimately increased the humus content. This study provided potential technology support for improving the quality of agroforestry organic waste composting and degrading PAHs in aged contaminated soil.
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Affiliation(s)
- Jiayue Huang
- College of Life Science and Technology, Harbin Normal University, Harbin, 150025, China
| | - Ziwei Jiang
- College of Life Science and Technology, Harbin Normal University, Harbin, 150025, China
| | - Anyang Li
- College of Life Science and Technology, Harbin Normal University, Harbin, 150025, China
| | - Fangzhi Jiang
- College of Life Science and Technology, Harbin Normal University, Harbin, 150025, China
| | - Pengfei Tang
- Heilongjiang Provincial Ecological Environment Monitoring Center, Harbin, 150056, China
| | - Jizhe Cui
- College of Life Science and Technology, Harbin Normal University, Harbin, 150025, China
| | - Wenxuan Feng
- College of Life Science and Technology, Harbin Normal University, Harbin, 150025, China
| | - Chang Fu
- College of Life Science and Technology, Harbin Normal University, Harbin, 150025, China
| | - Qian Lu
- College of Life Science and Technology, Harbin Normal University, Harbin, 150025, China.
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10
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Yang J, Du Z, Huang C, Li W, Xi B, Zhu L, Wu X. Dynamics of microbial functional guilds involved in the humification process during aerobic composting of chicken manure on an industrial scale. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:21044-21056. [PMID: 38381293 DOI: 10.1007/s11356-024-32390-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 02/05/2024] [Indexed: 02/22/2024]
Abstract
Proper composting treatment of poultry manure waste is recommended before its use as a fertilizer. This involves many bioprocesses driven by microorganisms. Therefore, it is important to understand microbial mechanisms behind these bioprocesses in manure composting systems. Many efforts have been made to study the microbial community structure and diversity in these systems using high-throughput sequencing techniques. However, the dynamics of microbial interaction and functionality, especially for key microbial functional guilds, are not yet fully understood. To address these knowledge gaps, we collected samples from a 150-day industrial chicken manure composting system and performed the microbial network analysis based on the sequencing data. We found that the family Bacillaceae and genus Bacillus might play important roles in organic matter biodegradation at the mesophilic/thermophilic phases. Genera Virgibacillus, Gracilibacillus, Nocardiopsis, Novibacillus, and Bacillaceae_BM62 were identified as the key ones for humic acid synthesis at the mature phases. These findings improve our understanding about the fundamental mechanisms behind manure composting and can aid the development of microbial agents to promote manure composting performance.
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Affiliation(s)
- Jie Yang
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, No. 8 Dayangfang, Beiyuan Road, Chaoyang District, Beijing, 100012, China
- State Environmental Protection Key Laboratory of Ecological Effect and Risk Assessment of Chemicals, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Zhe Du
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, No. 8 Dayangfang, Beiyuan Road, Chaoyang District, Beijing, 100012, China
- State Environmental Protection Key Laboratory of Ecological Effect and Risk Assessment of Chemicals, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Caihong Huang
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, No. 8 Dayangfang, Beiyuan Road, Chaoyang District, Beijing, 100012, China.
- State Environmental Protection Key Laboratory of Ecological Effect and Risk Assessment of Chemicals, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China.
| | - Wei Li
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, No. 8 Dayangfang, Beiyuan Road, Chaoyang District, Beijing, 100012, China
- State Environmental Protection Key Laboratory of Ecological Effect and Risk Assessment of Chemicals, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Beidou Xi
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, No. 8 Dayangfang, Beiyuan Road, Chaoyang District, Beijing, 100012, China
- State Environmental Protection Key Laboratory of Ecological Effect and Risk Assessment of Chemicals, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Lin Zhu
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, No. 8 Dayangfang, Beiyuan Road, Chaoyang District, Beijing, 100012, China
- State Environmental Protection Key Laboratory of Ecological Effect and Risk Assessment of Chemicals, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, 150090, China
| | - Xinxin Wu
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, No. 8 Dayangfang, Beiyuan Road, Chaoyang District, Beijing, 100012, China
- State Environmental Protection Key Laboratory of Ecological Effect and Risk Assessment of Chemicals, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
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11
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Zhao H, Li S, Pu J, Wang H, Dou X. Effects of Bacillus-based inoculum on odor emissions co-regulation, nutrient element transformations and microbial community tropological structures during chicken manure and sawdust composting. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 354:120328. [PMID: 38354615 DOI: 10.1016/j.jenvman.2024.120328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Revised: 01/16/2024] [Accepted: 02/08/2024] [Indexed: 02/16/2024]
Abstract
This study aims to evaluate whether different doses of Bacillus-based inoculum inoculated in chicken manure and sawdust composting will provide distinct effects on the co-regulation of ammonia (NH3) and hydrogen sulfide (H2S), nutrient conversions and microbial topological structures. Results indicate that the Bacillus-based inoculum inhibits NH3 emissions mainly by regulating bacterial communities, while promotes H2S emissions by regulating both bacterial and fungal communities. The inoculum only has a little effect on total organic carbon (TOC) and inhibits total sulfur (TS) and total phosphorus (TP) accumulations. Low dose inoculation inhibits total potassium (TK) accumulation, while high dose inoculation promotes TK accumulation and the opposite is true for total nitrogen (TN). The inoculation slightly affects the bacterial compositions, significantly alters the fungal compositions and increases the microbial cooperation, thus influencing the compost substances transformations. The microbial communities promote ammonium nitrogen (NH4+-N), TN, available phosphorus (AP), total potassium (TK) and TS, but inhibit nitrate nitrogen (NO3--N), TP and TK. Additionally, the bacterial communities promote, while the fungal communities inhibit the nitrite nitrogen (NO2--N) production. The core bacterial and fungal genera regulate NH3 and H2S emissions through the secretions of metabolic enzymes and the promoting or inhibiting effects on NH3 and H2S emissions are always opposite. Hence, Bacillus-based inoculum cannot regulate the NH3 and H2S emissions simultaneously.
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Affiliation(s)
- Huaxuan Zhao
- Jiangsu Institute of Poultry Sciences, Yangzhou, 225125, China
| | - Shangmin Li
- Jiangsu Institute of Poultry Sciences, Yangzhou, 225125, China.
| | - Junhua Pu
- Jiangsu Institute of Poultry Sciences, Yangzhou, 225125, China
| | - Hongzhi Wang
- Jiangsu Institute of Poultry Sciences, Yangzhou, 225125, China
| | - Xinhong Dou
- Jiangsu Institute of Poultry Sciences, Yangzhou, 225125, China
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12
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Dong S, Wei Y, Yu Q, Gao Y, Chen H, Zhou K, Cheng M, Wang B, Wei Y, Hu X. Inoculating functional bacteria improved the humification process by regulating microbial networks and key genera in straw composting by adding different nitrogen sources. BIORESOURCE TECHNOLOGY 2024; 393:130022. [PMID: 37979883 DOI: 10.1016/j.biortech.2023.130022] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 11/04/2023] [Accepted: 11/12/2023] [Indexed: 11/20/2023]
Abstract
The aim of this study was to compare the effect of functional inoculant and different nitrogen sources on the relationship among lignocellulose, precursors, and humus as well as their interactions with bacterial genera in straw composting. Results showed that inoculation improved the heating process and retained more nitrate compared to control. Inoculation increased the degradation of lignocellulosic components by 26.9%-81.6% and the formation of humus by 15.7%-23.0%. Bioinformatics analysis showed that inoculation enriched key genera Chryseolinea in complex nitrogen source (pig manure) compost and Pusillimas, Luteimonas, and Flavobacteria in single nitrogen source (urea) compost, which were related to humus formation. Network analysis found that inoculation and urea addition improved the microbial synergistic effect and inoculation combined with pig manure had more complex modularity and interactions. Combining the functional bacterial inoculant with urea helped to enhance the degradation of lignocellulose and humification process during straw composting especially with single nitrogen source.
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Affiliation(s)
| | - Yiyang Wei
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
| | - Qi Yu
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
| | - Yunfei Gao
- Heilongjiang Academy of Agricultural Sciences, Harbin 150086, China
| | - Heshu Chen
- Heilongjiang Academy of Agricultural Sciences, Harbin 150086, China
| | - Kaiyun Zhou
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, 100193 Beijing, China
| | - Meidi Cheng
- College of Chemistry and Chemical Engineering, Yantai University, Yantai 264005, China
| | - Bo Wang
- Institute of Animal Nutrition and Feed, Inner Mongolia Academy of Agricultural & Animal Husbandry Sciences, Hohhot 010031, China
| | - Yuquan Wei
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, 100193 Beijing, China
| | - Xiaomei Hu
- College of Life Science, Northeast Agricultural University, Harbin 150030, China.
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13
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Wang J, Jiao M, Zhan X, Hu C, Zhang Z. Humification and fungal community succession during pig manure composting: Membrane covering and mature compost addition. BIORESOURCE TECHNOLOGY 2024; 393:130030. [PMID: 37977497 DOI: 10.1016/j.biortech.2023.130030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Revised: 11/10/2023] [Accepted: 11/14/2023] [Indexed: 11/19/2023]
Abstract
The objective of this study was to elucidate the combined effect of a semi-permeable membrane (M) and mature compost (MC) on humification and fungal community succession in pig manure composting. Compared with the control, the concentrations of humic substances (HSs) increased by 44.54 % (M + 15 % MC) and 43.90 % (M). During the thermophilic phase, Aspergillus (67.26 %) was the dominant genus in the M + 15 % MC treatment. Membrane covering increased the relative abundance (RA) of other phyla (except for Ascomycetes and Basidiomycetes) on the 14th day and Basidiomycetes on the 80th day in M treatment. Humic acid, HSs were positively correlated with the RA of genera Myceliophthora, Kernia, and Mycothermus. Myceliophthora was the key genus in the M + 15 % MC treatment on the 80th day. The results showed that 15 % MC addition under membrane covering optimizes the quality of composting products.
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Affiliation(s)
- Juan Wang
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, PR China
| | - Minna Jiao
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, PR China
| | - Xiangyu Zhan
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, PR China
| | - Cuihuan Hu
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, PR China
| | - Zengqiang Zhang
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, PR China.
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14
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Fang C, Su Y, Zhuo Q, Wang X, Ma S, Zhan M, He X, Huang G. Responses of greenhouse gas emissions to aeration coupled with functional membrane during industrial-scale composting of dairy manure: Insights into bacterial community composition and function. BIORESOURCE TECHNOLOGY 2024; 393:130079. [PMID: 37993066 DOI: 10.1016/j.biortech.2023.130079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 11/17/2023] [Accepted: 11/18/2023] [Indexed: 11/24/2023]
Abstract
Greenhouse gas (GHG) emissions from manure management processes deserve more attention. Using three industrial-scale experiments, this study comprehensively evaluated the effects of different aeration coupled with semi-permeable membrane-covered strategies on the structure and function of bacterial communities and their impact on GHG emissions during dairy manure aerobic composting. The succession of the bacterial communities tended to be consistent for similar aeration strategies. Ruminiclostridium and norank_f__MBA03 were significantly positively correlated with the methane emission rate, and forced aeration coupled with semi-permeable membrane-covered decreased GHG emissions by inhibiting these taxa. Metabolism was the most active function of the bacterial communities, and its relative abundance accounted for 75.69%-80.23%. The combined process also enhanced carbohydrate metabolism and amino acid metabolism. Therefore, forced aeration coupled with semi-permeable membrane-covered represented a novel strategy for reducing global warming potential by regulating the structure and function of the bacterial communities during aerobic composting of dairy manure.
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Affiliation(s)
- Chen Fang
- College of Agriculture, Guizhou University, Guiyang, Guizhou Province 550025, China; Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Ya Su
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Qianting Zhuo
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Xiaoli Wang
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Shuangshuang Ma
- Institute of Energy and Environmental Protection, Academy of Agricultural Planning & Engineering, Ministry of Agriculture and Rural Affairs, Beijing 100125, China
| | - Muqing Zhan
- College of Agriculture, Guizhou University, Guiyang, Guizhou Province 550025, China
| | - Xueqin He
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Guangqun Huang
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China.
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15
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Wu Z, Kang L, Man Q, Xu X, Zhu F, Lyu H. Effects of hexabromocyclododecane and polyethylene microplastics on soil bacterial communities. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 906:167691. [PMID: 37827321 DOI: 10.1016/j.scitotenv.2023.167691] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2023] [Revised: 10/01/2023] [Accepted: 10/07/2023] [Indexed: 10/14/2023]
Abstract
Hexabromocyclododecane (HBCD) and polyethylene (PE) microplastic are ubiquitous pollutants, and knowledge about the effects of HBCD and PE pollution on soil bacterial communities remains obscure. In this study, the effects of different HBCD and PE concentrations and combined HBCD and PE exposure on the diversity, composition, and function of agricultural soil bacterial communities over 4 months were systematically examined for the first time. Generally, soil bacterial communities were influenced in both the 1-month and 4-month scenarios through HBCD and PE separately as well as combined exposure. After 4 months of exposure, PE and combined exposure significantly affected soil bacterial alpha diversity, however, low concentration of HBCD showed no apparent influence. 1-month and 4-month HBCD, PE, and combined exposure significantly influenced bacterial beta diversity. Compared with 1 month of exposure, HBCD, PE, and combined exposure demonstrated remarkable influences on soil bacteria after 4 months of exposure, especially on Nitrospirae, Elusimicrobia, Rokubacteria at the phylum level, and on MND1, Ruminiclostridium, Lysobacter, Anaeromyxobacter, Alistipes, WCHB1 at the genus level. The bacterial function analysis indicated that amino acid metabolism, carbohydrate metabolism, and membrane transport were the three predominant enriched bacterial functions after 1-month and 4-month HBCD and PE exposure. This research provides a comprehensive grasp of the effects of HBCD and PE pollution on soil microbial communities, which could have a beneficial impact on future soil pollution control.
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Affiliation(s)
- Zhineng Wu
- School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin 300401, China
| | - Linhao Kang
- School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin 300401, China
| | - Quanli Man
- School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin 300401, China
| | - Xiaoyi Xu
- School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin 300401, China
| | - Fujie Zhu
- School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin 300401, China; International Joint Research Center for Persistent Toxic Substances (IJRC-PTS), State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Honghong Lyu
- School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin 300401, China.
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16
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Liu Y, Wang F, Wang Z, Xiang L, Fu Y, Zhao Z, Kengara FO, Mei Z, He C, Bian Y, Naidu R, Jiang X. Soil properties and organochlorine compounds co-shape the microbial community structure: A case study of an obsolete site. ENVIRONMENTAL RESEARCH 2024; 240:117589. [PMID: 37926227 DOI: 10.1016/j.envres.2023.117589] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Revised: 10/28/2023] [Accepted: 11/02/2023] [Indexed: 11/07/2023]
Abstract
Organochlorine compounds (OCs) such as chlorobenzenes (CB) are persistent organic pollutants that are ubiquitous in soils at organochlorine pesticides (OCP) production sites. Long-term contamination with OCs might alter the soil microbial structure and further affect soil functions. However, the effects of OCs regarding the shaping of microbial community structures in the soils of OCs-contaminated sites remain obscure, especially in the vertical soil profile where pollutants are highly concealed. Hence this paper explored the status and causes of OCs pollution (CB, hexachlorocyclohexane (HCH), and dichlorodiphenyltrichloroethane (DDT)) in an obsolete site, and its combined effects with soil properties (pH, available phosphorus (AP), dissolved organic carbon (DOC), etc) on microbial community structure. The mean total concentration of OCs in the subsoils was up to 996 times higher than that in the topsoils, with CB constituting over 90% of OCs in the subsoil. Historical causes, anthropogenic effects, soil texture, and the nature of OCs contributed to the differences in the spatial distribution of OCs. Redundancy analysis revealed that both the soil properties and OCs were important factors in shaping microbial composition and diversity. Variation partitioning analysis further indicated that soil properties had a greater impact on microbial community structure than OCs. Significant differences in microbial composition between topsoils and subsoils were observed through linear discriminant analysis effect size (LEfSe) analysis, primarily driven by different pollutant conditions. Additionally, co-occurrence network analysis indicated that heavily contaminated subsoils exhibited closer and more intricate bacterial community interactions compared to lightly contaminated topsoils. This work reveals the impact of environmental factors in co-shaping the structure of soil microbial communities. These findings advance our understanding of the intricate interplay among organochlorine pollutants, soil properties, and microbial communities, and provides valuable insights into devising effective management strategies in OCs-contaminated soils.
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Affiliation(s)
- Yu Liu
- Chinese Academy of Science State Key Laboratory of Soil & Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Fang Wang
- Chinese Academy of Science State Key Laboratory of Soil & Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Ziquan Wang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Leilei Xiang
- Chinese Academy of Science State Key Laboratory of Soil & Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yuhao Fu
- Chinese Academy of Science State Key Laboratory of Soil & Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhiliang Zhao
- Chinese Academy of Science State Key Laboratory of Soil & Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | | | - Zhi Mei
- Chinese Academy of Science State Key Laboratory of Soil & Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Chao He
- Institute of Environment Pollution Control and Treatment, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, China
| | - Yongrong Bian
- Chinese Academy of Science State Key Laboratory of Soil & Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ravi Naidu
- Global Centre for Environmental Remediation (GCER), University of Newcastle, Callaghan, NSW 2308, Australia; Crc for Contamination Assessment and Remediation of the Environment (crcCARE), University of Newcastle, Callaghan, NSW 2308, Australia
| | - Xin Jiang
- Chinese Academy of Science State Key Laboratory of Soil & Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
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17
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Fu Q, Chen Z, Zhu C, Wen Q, Bao H, Wu Y. Size matters: Powder biochar promotes the elimination of antibiotics resistance genes and potential hosts during swine manure composting. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 906:167384. [PMID: 37797762 DOI: 10.1016/j.scitotenv.2023.167384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 09/16/2023] [Accepted: 09/24/2023] [Indexed: 10/07/2023]
Abstract
Livestock manure faced acute environmental pollution and ecology risky caused by antibiotic resistance genes (ARGs). This study investigated the effects of biochar particle size including powder biochar (75 μm, PB), and granular biochar (2 mm, GB) on ARGs variation during the aerobic composting. The results showed that the total relative abundance (RA) of the ARGs decreased significantly in all the treatments after composting. While compared to the removal efficiency of total RA in the control (CK), PB decreased by 90.99 % and GB increased by 93.25 %, and both PB and GB removed MGEs completely. Sulfonamide antibiotic resistance genes were the main contributor of the ARGs rebounding. PB addition could hinder the rebounding of sulfonamide antibiotic resistance genes during the later stage of the composting. Co-occurrence network analysis showed that the addition of biochar (both types) increased the complexity of the microbial community the competition of inter-phylum, which was indicated by the higher number of edge and density and lower positive connection. The different ARGs removal efficiency in these two treatments might be that PB promoted the competition both inter-phylum and potential hosts-other microbes, resulted in fewer kinds and abundance of ARGs hosts, while GB increased the stability of ARGs hosts making it more resistant to environment changes. Totally, compared with the global adjustment strategy of microbial communities, more exclusive methods focusing on the controlling of ARGs hosts should be explored to decrease the ecological risk of composting products during composting process.
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Affiliation(s)
- Qiqi Fu
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China
| | - Zhiqiang Chen
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China
| | - Chengwu Zhu
- Beijing Municipal Constructure (Group) Co., Ltd, Beijing 100045, PR China
| | - Qinxue Wen
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China.
| | - Huanyu Bao
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China
| | - Yiqi Wu
- Research Institute of Standards and Norms, Ministry of Housing and Urban-Rural Development, Beijing 100835, China
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18
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Zhang H, Dou Z, Bi W, Yang C, Wu X, Wang L. Multi-omics study of sulfur metabolism affecting functional microbial community succession during aerobic solid-state fermentation. BIORESOURCE TECHNOLOGY 2023; 387:129664. [PMID: 37573975 DOI: 10.1016/j.biortech.2023.129664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 08/05/2023] [Accepted: 08/09/2023] [Indexed: 08/15/2023]
Abstract
Microbial-mediated sulfur metabolism is closely related to carbon and nitrogen metabolism in natural biological systems. In this study, the effects of sulfur metabolism on microbial communities and functional enzyme succession were investigated based on integrated multi-omics by adding sulfur-containing compounds to aerobic fermentation systems. Sulfur powder was oxidized to S2O32- and subsequently to SO42- by the microbial sulfur-oxidizing system, which lowered the pH to 7.5 on day 7. The decrease in pH resulted in Planifilum (secreted S8, M17 and M32 proteases) losing its competitive advantage, whereas Novibacillus (secreted M14 and M19 metalloproteases) became dominant. Structural proteomics indicated that the surface of Novibacillus proteases has more negatively charged amino acid residues that help maintain protein stability at low pH. These findings aid understanding of the effects of sulfur metabolism on fermentation and the mechanism of microbial adaptation after pH reduction, providing new perspectives on the optimization of fermentation processes.
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Affiliation(s)
- Hong Zhang
- State Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China
| | - Zhixin Dou
- State Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China
| | - Wenhui Bi
- State Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China; Faculty of Food Science and Engineering, Shandong Agricultural and Engineering University, Jinan, Shandong 250100, China
| | - Chuanlun Yang
- Shandong Chambroad Holding Group Co., Ltd., Boxing 256599, China
| | - Xiuyun Wu
- State Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China
| | - Lushan Wang
- State Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China.
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19
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Li L, Liu Y, Kong Y, Zhang J, Shen Y, Li G, Wang G, Yuan J. Relating bacterial dynamics and functions to greenhouse gas and odor emissions during facultative heap composting of four kinds of livestock manure. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 345:118589. [PMID: 37451027 DOI: 10.1016/j.jenvman.2023.118589] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Revised: 06/06/2023] [Accepted: 07/03/2023] [Indexed: 07/18/2023]
Abstract
Although facultative heap composting is widely used in small and medium-sized livestock farms in China, there are few studies on greenhouse gas (GHG) and odor emissions from this composting system. This study focused on GHG and odor emissions from facultative heap composting of four types of livestock manure and revealed the relationship between the gaseous emissions and microbial communities. Results showed that pig, sheep, and cow manure reached high compost maturity (germination index (GI) > 70%), whereas chicken manure had higher phytotoxicity (GI = 0.02%) with higher electrical conductivity and a lower carbon/nitrogen ratio. The four manure types significantly differed in the total GHG emission, with the following pattern: pig manure (308 g CO2-eq·kg-1) > cow manure (146 g CO2-eq·kg-1) > chicken manure (136 g CO2-eq·kg-1) > sheep manure (95 g CO2-eq·kg-1). Bacterium with Fermentative, Methanotrophy and Nitrite respiratory functions (e.g. Pseudomonas and Lactobacillus) are enriched within the pile so that more than 90% of the GHGs are produced in the early (days 0-15) and late (days 36-49) composting periods. CO2 contributed more than 90% in the first 35 d, N2O contributed 40-75% in the late composting period, and CH4 contributed less than 8.0%. NH3 and H2S emissions from chicken and pig manure were 4.8 times those from sheep and cow manure. Overall, the gas emissions from facultative heap composting significantly differed among the four manure types due to the significant differences in their physicochemical properties and microbial communities.
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Affiliation(s)
- Liqiong Li
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing 100193, China
| | - Yan Liu
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing 100193, China
| | - Yilin Kong
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing 100193, China
| | - Jing Zhang
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing 100193, China
| | - Yujun Shen
- Key Laboratory of Te-chnology and Model for Cyclic Utilization from Agricultural Resources, Ministry of Agriculture and Rural Affairs, Beijing 100125, China
| | - Guoxue Li
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China
| | - Guoying Wang
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing 100193, China.
| | - Jing Yuan
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China.
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20
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Yu C, Zhu Z, Meng K, Zhang H, Xu M. Unveiling the impact and mechanisms of Cd-driven ecological assembly and coexistence of bacterial communities in coastal sediments of Yellow Sea. JOURNAL OF HAZARDOUS MATERIALS 2023; 460:132309. [PMID: 37639798 DOI: 10.1016/j.jhazmat.2023.132309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Revised: 07/30/2023] [Accepted: 08/13/2023] [Indexed: 08/31/2023]
Abstract
The microbial community assembly processes and underlying mechanisms in response to heavy metal accumulation in coastal sediments remain underexplored. In this study, the heavy metal concentration in samples were found below the marine sediment quality standards. Through partial Mantel tests and linear regression analysis, Cd was identified as the major influencing factor, displaying strongest correlation with the bacterial community in the sediments. The class Desulfuromonadia was identified as a biomarker which showed enrichment in the sediments with high Cd content. Additionally, the results of null model and the neutral community model demonstrated the prominent role of stochastic processes in the assembly of bacterial community. However, with the increase in Cd concentration, the influence of selection processes intensified, resulting in a decline in species migration rate and subsequent reduction in ecological niche width. Furthermore, the intensified competition and an increase in keystone species among bacterial populations further enhanced the stability of the microbial co-occurrence network in response to high Cd concentration. This study offers an insight into the effects of heavy metal on microbial assembly and coexistence, which are conducive to marine ecosystem management and conservation.
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Affiliation(s)
- Chengfeng Yu
- College of Marine Science and Engineering, Nanjing Normal University, Nanjing 210023, China; Coastal Zone Resources and Environment Engineering Research Center of Jiangsu Province, Nanjing 210023, China
| | - Zhiyong Zhu
- College of Marine Science and Engineering, Nanjing Normal University, Nanjing 210023, China; Coastal Zone Resources and Environment Engineering Research Center of Jiangsu Province, Nanjing 210023, China
| | - Kun Meng
- Jiangsu Yunfan Testing Technology Co., Ltd., Nanjing 210033, China
| | - Huan Zhang
- College of Marine Science and Engineering, Nanjing Normal University, Nanjing 210023, China; Coastal Zone Resources and Environment Engineering Research Center of Jiangsu Province, Nanjing 210023, China.
| | - Min Xu
- College of Marine Science and Engineering, Nanjing Normal University, Nanjing 210023, China; Coastal Zone Resources and Environment Engineering Research Center of Jiangsu Province, Nanjing 210023, China.
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21
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Matiz-Villamil A, Méndez-Carranza KJ, Pascagaza-Pulido AF, Rendón-Rendón T, Noriega-Noriega J, Pulido-Villamarín A. Trends in the management of organic swine farm waste by composting: A systematic review. Heliyon 2023; 9:e18208. [PMID: 37576302 PMCID: PMC10412907 DOI: 10.1016/j.heliyon.2023.e18208] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Revised: 07/10/2023] [Accepted: 07/11/2023] [Indexed: 08/15/2023] Open
Abstract
Pig farming contributes to the economic development of nations and supplies human food demand; however, it generates a large amount of organic waste which, if not managed properly, becomes a risk to the environment and human and animal health. Considering the relevance of composting and its usefulness for the use of waste, this study aimed to determine the global trends in the management of composting manure, mortality and other organic waste produced on pig farms over the last five years (2017-2022). Systematic search involved four databases: ISI Web of Science, Scopus, Ebsco and Scielo. Of the total findings, 56 articles were included in the review, further classified into 14 categories for their respective analysis: co-substrates/additives, microbial communities, antibiotic resistance, heavy metals, polycyclic aromatic hydrocarbons, microbiological/parasitological quality, phytopathogens, nitrogen transformation, bioinoculants, comparison/combination with other waste management techniques, factors affecting composting, swine mortality and plant growth promotion/phytotoxicity. The review exemplified the importance of swine mortality composting as an alternative for organic matter management in pig farms, considering that the process also includes manure, vegetable waste and wood chips, among others. Controlled factors throughout the process are a requirement to obtain a stable product with physicochemical and microbiological quality that complies with national and international regulations and that will be useful and safe for application on crops, ensuring environmental, animal, and human health.
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Affiliation(s)
- Adriana Matiz-Villamil
- Laboratorio de Biotecnología Aplicada, Grupo de Biotecnología Ambiental e Industrial (GBAI), Departamento de Microbiología, Facultad de Ciencias, Pontificia Universidad Javeriana, Bogotá, D.C., Colombia
| | - Kelly Johana Méndez-Carranza
- Unidad de Investigaciones Agropecuarias (UNIDIA), Departamento de Microbiología, Facultad de Ciencias, Pontificia Universidad Javeriana, Bogotá, D.C., Colombia
| | - Andrés Felipe Pascagaza-Pulido
- Unidad de Investigaciones Agropecuarias (UNIDIA), Departamento de Microbiología, Facultad de Ciencias, Pontificia Universidad Javeriana, Bogotá, D.C., Colombia
| | - Tatiana Rendón-Rendón
- Unidad de Investigaciones Agropecuarias (UNIDIA), Departamento de Microbiología, Facultad de Ciencias, Pontificia Universidad Javeriana, Bogotá, D.C., Colombia
| | - Juliana Noriega-Noriega
- Unidad de Investigaciones Agropecuarias (UNIDIA), Departamento de Microbiología, Facultad de Ciencias, Pontificia Universidad Javeriana, Bogotá, D.C., Colombia
| | - Adriana Pulido-Villamarín
- Unidad de Investigaciones Agropecuarias (UNIDIA), Departamento de Microbiología, Facultad de Ciencias, Pontificia Universidad Javeriana, Bogotá, D.C., Colombia
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22
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Zhang Z, Duan C, Liu Y, Li A, Hu X, Chen J, Zhang S, Li X, Che R, Li S, Ekelund F, Cui X. Green waste and sewage sludge feeding ratio alters co-composting performance: Emphasis on the role of bacterial community during humification. BIORESOURCE TECHNOLOGY 2023; 380:129014. [PMID: 37028527 DOI: 10.1016/j.biortech.2023.129014] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Revised: 03/29/2023] [Accepted: 04/02/2023] [Indexed: 05/14/2023]
Abstract
Composting with five levels of green waste and sewage sludge was compared to examine how feeding ratios affected composting performance with special focus on humification, and the underlying mechanisms. The results showed that the raw material ratio persistently affected compost nutrients and stability. Humification and mineralization were promoted by higher proportion of sewage sludge. Bacterial community composition and within-community relationships were also significantly affected by the raw material feeding ratio. Network analysis indicated that clusters 1 and 4 which dominated by Bacteroidetes, Proteobacteria, and Acidobacteria shown significantly positive correlation with humic acid concentration. Notably, the structural equational model and variance partitioning analysis demonstrated that bacterial community structure (explained 47.82% of the variation) mediated the effect of raw material feeding ratio on humification, and exceeded the effect of environmental factors (explained 19.30% of the variation) on humic acid formation. Accordingly, optimizing the composting raw material improves the composting performance.
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Affiliation(s)
- Zejin Zhang
- School of Ecology and Environmental Science & Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming 650091, China; Sino-Danish College, University of Chinese Academy of Sciences, Beijing 100190, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; Department of Biology, University of Copenhagen, Copenhagen Ø DK-2100, Denmark
| | - Changqun Duan
- School of Ecology and Environmental Science & Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming 650091, China
| | - Yuxian Liu
- Yuxi Experimental Senior High School, Yuxi 653100, China
| | - Anning Li
- School of Ecology and Environmental Science & Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming 650091, China
| | - Xi Hu
- School of Ecology and Environmental Science & Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming 650091, China
| | - Jingkun Chen
- Institute of International Rivers and Eco-security, Yunnan University, Kunming 650091, China
| | - Song Zhang
- Institute of International Rivers and Eco-security, Yunnan University, Kunming 650091, China
| | - Xin Li
- School of Ecology and Environmental Science & Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming 650091, China; Sino-Danish College, University of Chinese Academy of Sciences, Beijing 100190, China
| | - Rongxiao Che
- Institute of International Rivers and Eco-security, Yunnan University, Kunming 650091, China
| | - Shiyu Li
- School of Ecology and Environmental Science & Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming 650091, China.
| | - Flemming Ekelund
- Sino-Danish College, University of Chinese Academy of Sciences, Beijing 100190, China; Department of Biology, University of Copenhagen, Copenhagen Ø DK-2100, Denmark
| | - Xiaoyong Cui
- Sino-Danish College, University of Chinese Academy of Sciences, Beijing 100190, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
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23
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Duan Y, Awasthi MK, Yang J, Tian Y, Li H, Cao S, Syed A, Verma M, Ravindran B. Bacterial community dynamics and co-occurrence network patterns during different stages of biochar-driven composting. BIORESOURCE TECHNOLOGY 2023:129358. [PMID: 37336449 DOI: 10.1016/j.biortech.2023.129358] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Revised: 06/12/2023] [Accepted: 06/16/2023] [Indexed: 06/21/2023]
Abstract
Bacterial communities were dynamically tracked at four stages of biochar-driven sheep manure pile composting, and the co-occurrence networks with keystone taxa were established. The succession of bacterial community obvious varied during the composting process, Proteobacteria predominant in initial stage (39%) then shifted into Firmicutes in thermophilic (41%) and mesophilic (27%) stages, finally the maturation stage dominant by Bacteroidota (26%). Visualizations of bacterial co-occurrence networks demonstrate more cooperative mutualism and complex interactions in the thermophilic and mesophilic phases. Noticeably, the 7.5 and 10% biochar amended composts shown highest connections (736 and 663 total links) and positive cooperation (97.37 and 97.13% positive link) as well as higher closeness centrality and betweenness centrality of keystone taxa. Overall, appropriate biochar addition alters bacterial community succession and strengthens connection between keystone taxa and other bacteria, with 7.5 and 10% biochar amended composts has intense mutualistic symbiosis among bacterial communities.
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Affiliation(s)
- Yumin Duan
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Mukesh Kumar Awasthi
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Jianfeng Yang
- College of Resources Environment Science and Technology, Hubei University of Science and Technology, Xianning 437100, Hubei, China
| | - Yuan Tian
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Huike Li
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China.
| | - Shan Cao
- College of Food Science and Engineering, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Asad Syed
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. 2455, Riyadh 11451, Saudi Arabia
| | - Meenakshi Verma
- University Centre for Research & Development Department of Chemistry Chandigarh University Gharuan, Mohali, India
| | - Balasubramani Ravindran
- Department of Environmental Energy and Engineering, Kyonggi University, Yeongtong-Gu, Suwon, Gyeonggi-Do 16227, South Korea
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24
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Ahmed I, Zhang Y, Sun P, Zhang B. Co-occurrence pattern of ARGs and N-functional genes in the aerobic composting system with initial elevated temperature. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 343:118073. [PMID: 37229868 DOI: 10.1016/j.jenvman.2023.118073] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 04/10/2023] [Accepted: 04/28/2023] [Indexed: 05/27/2023]
Abstract
Animal manure is known to harbor antibiotic resistance genes (ARGs). Aerobic composting is a prevalent cost-effective and sustainable method to treat animal waste. However, the effect of initially elevated temperature on antibiotic resistome during the composting process is unclear. In this study composting was subjected to initial external heating (EHC) for a period of 5 days compared to conventional composting (CC). After composting ARGs abundance was significantly reduced by 2.43 log in EHC and 1.95 log in CC. Mobile genetic elements (MGEs) also exhibited a reduction of 1.95 log in EHC and 1.49 log in CC. However, during the cooling phase, the genes resisting macrolide lincosamide and streptogramin B (MLSB) rebounded by 0.04 log in CC. The potential human pathogenic bacteria Pseudomonas (41.5-61.5%) and Actinobacteria (98.4-98.8%) were significantly reduced in both treatments and the bulk of targeted antibiotics were eliminated by 80.74% in EHC and 68.98% in CC. ARGs and N-functional genes (NFGs), mainly denitrification genes, were carried by the same microbial species, such as Corynebacterium sp. and Bacillus sp., of the dominant phylum. Redundancy analysis (RDA) revealed that CC microbial communities played a key role in the enrichment of ARGs while in EHC the variation of ARGs was attributed to the composting temperature. The number of high-risk ARGs was also lower in EHC (4) compared with CC (6) on day 30. These results provide insight into the effects of an initially enhanced temperature on ARGs removal and the relationship between ARGs and NFGs during the composting process.
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Affiliation(s)
- Imtiaz Ahmed
- Environmental Science and Engineering School, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, 200240, China
| | - Yongpeng Zhang
- Environmental Science and Engineering School, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, 200240, China
| | - Pengyu Sun
- Environmental Science and Engineering School, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, 200240, China
| | - Bo Zhang
- Environmental Science and Engineering School, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, 200240, China; State Environmental Protection Key Laboratory of Environmental Health Impact Assessment of Emerging Contaminants, Shanghai, 200240, China.
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25
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Singh S, Keating C, Ijaz UZ, Hassard F. Molecular insights informing factors affecting low temperature anaerobic applications: Diversity, collated core microbiomes and complexity stability relationships in LCFA-fed systems. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 874:162420. [PMID: 36842571 DOI: 10.1016/j.scitotenv.2023.162420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 01/31/2023] [Accepted: 02/19/2023] [Indexed: 06/18/2023]
Abstract
Fats, oil and grease, and their hydrolyzed counterparts-long chain fatty acids (LCFA) make up a large fraction of numerous wastewaters and are challenging to degrade anaerobically, more so, in low temperature anaerobic digestion (LtAD) systems. Herein, we perform a comparative analysis of publicly available Illumina 16S rRNA datasets generated from LCFA-degrading anaerobic microbiomes at low temperatures (10 and 20 °C) to comprehend the factors affecting microbial community dynamics. The various factors considered were the inoculum, substrate and operational characteristics, the reactor operation mode and reactor configuration, and the type of nucleic acid sequenced. We found that LCFA-degrading anaerobic microbiomes were differentiated primarily by inoculum characteristics (inoculum source and morphology) in comparison to the other factors tested. Inoculum characteristics prominently shaped the species richness, species evenness and beta-diversity patterns in the microbiomes even after long term operation of continuous reactors up to 150 days, implying the choice of inoculum needs careful consideration. The generalised additive models represented through beta diversity contour plots revealed that psychrophilic bacteria RBG-13-54-9 from family Anaerolineae, and taxa WCHB1-41 and Williamwhitmania were highly abundant in LCFA-fed microbial niches, suggesting their role in anaerobic treatment of LCFAs at low temperatures of 10-20 °C. Overall, we showed that the following bacterial genera: uncultured Propionibacteriaceae, Longilinea, Christensenellaceae R7 group, Lactivibrio, candidatus Caldatribacterium, Aminicenantales, Syntrophus, Syntrophomonas, Smithella, RBG-13-54-9, WCHB1-41, Trichococcus, Proteiniclasticum, SBR1031, Lutibacter and Lentimicrobium have prominent roles in LtAD of LCFA-rich wastewaters at 10-20 °C. This study provides molecular insights of anaerobic LCFA degradation under low temperatures from collated datasets and will aid in improving LtAD systems for treating LCFA-rich wastewaters.
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Affiliation(s)
- Suniti Singh
- Cranfield Water Science Institute, Cranfield University, College Way, Bedfordshire MK43 0AL, UK.
| | - Ciara Keating
- School of Biodiversity, One Health and Veterinary Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, UK.
| | - Umer Zeeshan Ijaz
- Infrastructure and Environment Research Division, James Watt School of Engineering, University of Glasgow, UK; Department of Molecular and Clinical Cancer Medicine, University of Liverpool, UK; College of Science and Engineering, NUI Galway, Ireland.
| | - Francis Hassard
- Cranfield Water Science Institute, Cranfield University, College Way, Bedfordshire MK43 0AL, UK; Institute for Nanotechnology and Water Sustainability, University of South Africa, UNISA Science Campus, 1710 Roodepoort, Johannesburg, South Africa.
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26
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Ren L, Huang X, Min H, Wang H, Xie Y, Zou H, Qiao C, Wu W. Different ratios of raw material triggered composting maturity associated with bacterial community co-occurrence patterns. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:62532-62543. [PMID: 36943561 DOI: 10.1007/s11356-023-26468-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Accepted: 03/11/2023] [Indexed: 05/10/2023]
Abstract
Exploring the ecological function of potential core bacteria for high-efficiency composting can provide a fundamental understanding of the role of composting bacterial communities. Mushroom residue and kitchen garbage at different ratios (N1: 1/1, N2: 1/2) of dry weight were tested to investigate the key ecological role of the core bacteria responsible for producing mature compost. N1 had a peak temperature of 75.0 °C which was higher than N2 (68.3 °C). Other key composting parameters (carbon to nitrogen ratio (C/N) and germination index (GI)) also indicated that N1 achieved higher compost maturity. Rice seedlings experiments also further validated this conclusion. Putative key bacterial taxa (Thermobifida, Luteimonasd, Bacillus, etc.) were positively associated with the GI, indicating a substantial contribution to composting maturity. Co-occurrence network analysis revealed the ecological function of potentially beneficial core bacteria promoted cooperation among the bacterial community. The putative core bacteria in N1 may affect composting efficiency. Our findings reveal the mechanism of potential core bacteria throughout the compost maturity phases.
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Affiliation(s)
- Lantian Ren
- Anhui Engineering Research Center for Smart Crop Planting and Processing Technology, Anhui Science and Technology University, 233100, Chuzhou, Anhui Province, People's Republic of China
| | - Xingchen Huang
- Anhui Engineering Research Center for Smart Crop Planting and Processing Technology, Anhui Science and Technology University, 233100, Chuzhou, Anhui Province, People's Republic of China
| | - Hongzhi Min
- Anhui Engineering Research Center for Smart Crop Planting and Processing Technology, Anhui Science and Technology University, 233100, Chuzhou, Anhui Province, People's Republic of China
| | - Hong Wang
- Anhui Engineering Research Center for Smart Crop Planting and Processing Technology, Anhui Science and Technology University, 233100, Chuzhou, Anhui Province, People's Republic of China
| | - Yiqing Xie
- Anhui Engineering Research Center for Smart Crop Planting and Processing Technology, Anhui Science and Technology University, 233100, Chuzhou, Anhui Province, People's Republic of China
| | - Haiming Zou
- Anhui Engineering Research Center for Smart Crop Planting and Processing Technology, Anhui Science and Technology University, 233100, Chuzhou, Anhui Province, People's Republic of China
| | - Cece Qiao
- Anhui Engineering Research Center for Smart Crop Planting and Processing Technology, Anhui Science and Technology University, 233100, Chuzhou, Anhui Province, People's Republic of China.
| | - Wenge Wu
- Rice Research Institute, Anhui Academy of Agricultural Sciences, 230031, Hefei, Anhui Province, People's Republic of China
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27
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Bojarski W, Czekała W, Nowak M, Dach J. Production of compost from logging residues. BIORESOURCE TECHNOLOGY 2023; 376:128878. [PMID: 36921643 DOI: 10.1016/j.biortech.2023.128878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Revised: 03/07/2023] [Accepted: 03/09/2023] [Indexed: 06/18/2023]
Abstract
The implementation of forest management generates logging residue which can be used in several ways. One of the option is to use of logging residue in the composting process. Therefore, this study determined the possibility of producing compost based on logging residue and the produced fertilizer used to fertilize forest nurseries. Pine chips and sewage sludge were used for carrying out the study. The compost, as well as the leachate produced during composting, were characterized by high NPK content. The leachate collected at the end of the experiment was characterized by nitrogen content of approximately 6500 mg‧dm-3, phosphorus of approximately 450 mg‧dm-3, and potassium of approximately 500-700 mg‧dm-3. In contrast, the compost produced contained approximately 0.57 g‧kg-1 nitrogen, approximately 0.39 g‧kg-1 phosphorus, and approximately 0.24 g‧kg-1 potassium. The disadvantage in terms of the usefulness of the resulting fertilizer in forest nurseries is its pH, which exceeded 9.0.
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Affiliation(s)
- Wiktor Bojarski
- Department of Biosystems Engineering, Poznań University of Life Sciences, Wojska Polskiego 50, 60-627 Poznań, Poland.
| | - Wojciech Czekała
- Department of Biosystems Engineering, Poznań University of Life Sciences, Wojska Polskiego 50, 60-627 Poznań, Poland.
| | - Mateusz Nowak
- Department of Biosystems Engineering, Poznań University of Life Sciences, Wojska Polskiego 50, 60-627 Poznań, Poland.
| | - Jacek Dach
- Department of Biosystems Engineering, Poznań University of Life Sciences, Wojska Polskiego 50, 60-627 Poznań, Poland.
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28
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Verma S, Kumar Awasthi M, Liu T, Kumar Awasthi S, Yadav V, Ravindran B, Syed A, Eswaramoorthy R, Zhang Z. Biochar as smart organic catalyst to regulate bacterial dynamics during food waste composting. BIORESOURCE TECHNOLOGY 2023; 373:128745. [PMID: 36796733 DOI: 10.1016/j.biortech.2023.128745] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 02/09/2023] [Accepted: 02/10/2023] [Indexed: 06/18/2023]
Abstract
The impact of wheat straw biochar (WSB) on bacterial dynamics succession during food waste (FW) composting was analyzed. Six treatments [0(T1), 2.5(T2), 5 (T3), 7.5 (T4), 10 (T5), and 15 %(T6)] dry weight WSB were used with FW and saw dust for composting. At the highest thermal peak at 59 ℃ in T6, the pH varied from 4.5 to 7.3, and electrical conductivity among the treatments varied from 1.2 to 2.0 mScm1. Firmicutes (25-97 %), Proteobacteria (8-45 %), and Bacteroidota (5-50 %) were among the dominate phyla of the treatments. Whereas, Bacillus (5-85 %), Limoslactobacillus (2-40 %), and Sphingobacterium (2-32 %) were highest among the identified genus in treatments but surprisingly Bacteroides was in greater abundance in the control treatments. Moreover, heatmap constructed with 35 various genera in all the treatments showed that Gammaproteobacterial genera contributed in large proportion after 42 days in T6. Additionally, a dynamic shift from Lactobacillus fermentum to higher abundance of Bacillus thermoamylovorans was reported on 42 days of FW composting. Biochar 15 % amendment can improve FW composting by influencing bacterial dynamics.
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Affiliation(s)
- Shivpal Verma
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Mukesh Kumar Awasthi
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Tao Liu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China; School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an 710055, China
| | - Sanjeev Kumar Awasthi
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Vivek Yadav
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Balasubramani Ravindran
- Department of Environmental Energy and Engineering, Kyonggi University, Yeongtong-Gu, Suwon, Gyeonggi-Do 16227, Republic of Korea
| | - Asad Syed
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. 2455, Riyadh 11451, Saudi Arabia
| | - Rajalakshmanan Eswaramoorthy
- Department of Prosthodontics, Saveetha Dental College and Hospitals, Saveetha Institute of Medical and Technical Sciences (SIMATS), Chennai 600077, India
| | - Zengqiang Zhang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China.
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Song X, Lu C, Luo J, Gong X, Guo D, Ma Y. Matured compost amendment improves compost nutrient content by changing the bacterial community during the composting of Chinese herb residues. Front Microbiol 2023; 14:1146546. [PMID: 37007496 PMCID: PMC10060987 DOI: 10.3389/fmicb.2023.1146546] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Accepted: 02/20/2023] [Indexed: 03/18/2023] Open
Abstract
Composting is a sustainable strategy to deal with organic waste. Our research aimed to study the influence of an amendment of 10% matured compost (MC) during Chinese herb residue (CHR) compost. Here, a 60-day CHR compost was performed, and MC application was able to reduce the nitrogen loss and enhance the humic acid accumulation during the composting as compared with the non-inoculated control (NC), by 25 and 19%, respectively. Furthermore, the matured compost amendment improved the diversity of the bacterial community, increased the complexity of the co-occurrence network, and changed the keystone and module hub bacteria during composting. The increased abundance levels of Thermopolyspora, Thermobispora, and Thermosporomyces, which were significantly higher in MC than in NC, may contribute to the degradation of cellulose and the formation of humic acid. Overall, this study extends our understanding of the effects of matured compost reflux on compost quality and the bacterial community.
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Affiliation(s)
- Xiuchao Song
- Key Laboratory of Saline-Alkali Soil Improvement and Utilization (Coastal Saline-Alkali Lands), Ministry of Agriculture and Rural Affairs, Institute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, China
| | - Chao Lu
- Key Laboratory of Saline-Alkali Soil Improvement and Utilization (Coastal Saline-Alkali Lands), Ministry of Agriculture and Rural Affairs, Institute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, China
| | - Jia Luo
- Key Laboratory of Saline-Alkali Soil Improvement and Utilization (Coastal Saline-Alkali Lands), Ministry of Agriculture and Rural Affairs, Institute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, China
- National Agricultural Experimental Station for Agricultural Environment, Luhe, Nanjing, China
| | - Xin Gong
- Jiangsu Key Laboratory for Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Dejie Guo
- Key Laboratory of Saline-Alkali Soil Improvement and Utilization (Coastal Saline-Alkali Lands), Ministry of Agriculture and Rural Affairs, Institute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, China
| | - Yan Ma
- Key Laboratory of Saline-Alkali Soil Improvement and Utilization (Coastal Saline-Alkali Lands), Ministry of Agriculture and Rural Affairs, Institute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, China
- National Agricultural Experimental Station for Agricultural Environment, Luhe, Nanjing, China
- *Correspondence: Yan Ma,
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Liu C, Ai C, Liao H, Wen C, Gao T, Yang Q, Zhou S. Distinctive community assembly enhances the adaptation to extreme environments during hyperthermophilic composting. WASTE MANAGEMENT (NEW YORK, N.Y.) 2023; 157:60-68. [PMID: 36525880 DOI: 10.1016/j.wasman.2022.12.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 11/18/2022] [Accepted: 12/06/2022] [Indexed: 06/17/2023]
Abstract
Hyperthermophilic composting (hTC) is a promising technique for solid waste treatment due to its distinctive microbiomes. However, the assembly process of the hTC microbial community remains unclear. We investigated the assembly process of hTC and explored the underlying drivers influencing community assembly in this work by employing conventional thermophilic composting (cTC) as a comparison group. Our results showed that the two composting treatments have different community assembly processes. Especially for the initial and thermophilic phases, hTC is affected by homogeneous dispersal (48%) and homogeneous selection (44%), respectively, while cTC is controlled by undominant (38%) and homogeneous selection (92%), respectively. Furthermore, random forest models and network results suggested that different factors govern the community assembly in these two composting methods. Specifically, the hTC community increases the stability of the thermophilic community via enhancing the interactions of low-abundance taxa with other operational taxonomic units (OTUs) in community assembly. Our results suggested that the distinctive nature of hTC community assembly may be responsible for its adaptation to extreme environments.
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Affiliation(s)
- Chen Liu
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Chaofan Ai
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Hanpeng Liao
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
| | - Chang Wen
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Tian Gao
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Qiue Yang
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Shungui Zhou
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China
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Wang SP, Li XX, Sun ZY, Shuai WL, Xia ZY, Xie CY, Gou M, Tang YQ. Evaluation of physicochemical properties, bacterial community, and product fertility during rice straw composting supplemented with different nitrogen-rich wastes. BIORESOURCE TECHNOLOGY 2023; 369:128462. [PMID: 36503087 DOI: 10.1016/j.biortech.2022.128462] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 12/03/2022] [Accepted: 12/05/2022] [Indexed: 06/17/2023]
Abstract
This study evaluated the compostability of rice straw as the main feedstock (75 % in dry weight), supplemented with three different nitrogen-rich wastes, namely food waste (FW), dairy manure (DM), and sewage sludge (SS). Organic matter (OM) degradation, maturity and fertility of the end-product, and bacterial community structure during the composting processes were compared. All composting processes generated mature end-product within 51 days. Notably, FW addition was more effective to accelerate rice straw OM degradation and significantly improved end-product fertility with a high yield of Chinese cabbage. The succession of the bacterial community was accelerated with FW supplementation. Genera Geobacillus, Chryseolinea, and Blastocatella were significantly enriched during the composting of rice straw with FW supplementation. Finally, temperature, total nitrogen, moisture, pH, and total carbon were the key factors affecting microorganisms. This study provides a promising alternative method to enhance the disposal of larger amounts of rice straw in a shorter time.
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Affiliation(s)
- Shi-Peng Wang
- College of Architecture and Environment, Sichuan University, Chengdu 610065, Sichuan, China
| | - Xiao-Xing Li
- College of Architecture and Environment, Sichuan University, Chengdu 610065, Sichuan, China
| | - Zhao-Yong Sun
- College of Architecture and Environment, Sichuan University, Chengdu 610065, Sichuan, China.
| | - Wen-Liang Shuai
- College of Architecture and Environment, Sichuan University, Chengdu 610065, Sichuan, China
| | - Zi-Yuan Xia
- College of Architecture and Environment, Sichuan University, Chengdu 610065, Sichuan, China
| | - Cai-Yun Xie
- College of Architecture and Environment, Sichuan University, Chengdu 610065, Sichuan, China
| | - Min Gou
- College of Architecture and Environment, Sichuan University, Chengdu 610065, Sichuan, China
| | - Yue-Qin Tang
- College of Architecture and Environment, Sichuan University, Chengdu 610065, Sichuan, China
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Ahmed I, Zhang Y, Sun P, Xie Y, Zhang B. Sensitive response mechanism of ARGs and MGEs to initial designed temperature during swine manure and food waste co-composting. ENVIRONMENTAL RESEARCH 2023; 216:114513. [PMID: 36208781 DOI: 10.1016/j.envres.2022.114513] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2022] [Revised: 09/29/2022] [Accepted: 10/03/2022] [Indexed: 06/16/2023]
Abstract
The rapid aerobic composting process has been used to reduce organic wastes, but the associated risks of antibiotic resistance genes (ARGs) need to evaluate in an efficient way. The primary objective of this work was to explore the underlying mechanism of initial adjustment in composting temperature on the variation of ARGs, mobile genetic elements (MGEs), and microbial composition during co-composting. The co-composting was initially externally heated (T2) for 5 days. The results showed that ARGs abundance in conventional composting (T1) was reduced by 49.36%, while multidrug was enriched by 86.16% after a period of 30 days. While in T2 ARGs were removed by 79.46% particularly the fraction of sulfonamide, multidrug, and vancomycin resistance genes were >90% without rebounding of any ARGs. Whereas, MGEs were reduced by 68.12% and 93.62% in T1 and T2, while the half-lives of ARGs and MGEs were lower in T2 compared to T1 (86.3%,86.7%). T2 also affected the metabolism function by regulating carbohydrate metabolism (9.62-10.39%) and amino acid metabolism (9.92-10.93%). Apart from this, the potential human pathogenic bacteria Pseudomonas was reduced by 90.6% in T2 and only 32.9% in T1 respectively. Network analysis showed that Ureibacillus, Weissella, Corynebacterium, Escherichia-Shigella, Acinetobacter were the main host of multiple genes. Structural equation models exhibited that bacterial communities were mainly responsible for the enrichment of ARGs in T1, whereas, it was directly affected by MGEs in T2. Similarly, ARGs variation was directly related to composting temperature. With this simple strategy, ARGs associated risk can be significantly reduced in composting.
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Affiliation(s)
- Imtiaz Ahmed
- School of Environmental Science and Engineering, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, 200240, China
| | - Yongpeng Zhang
- School of Environmental Science and Engineering, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, 200240, China
| | - Pengyu Sun
- School of Environmental Science and Engineering, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, 200240, China
| | - Yu Xie
- School of Environmental Science and Engineering, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, 200240, China
| | - Bo Zhang
- School of Environmental Science and Engineering, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, 200240, China; State Environmental Protection Key Laboratory of Environmental Health Impact Assessment of Emerging Contaminants, Shanghai, 200240, China.
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33
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He Y, Liu D, He X, Wang Y, Liu J, Shi X, Chater CCC, Yu F. Characteristics of bacterial and fungal communities and their impact during cow manure and agroforestry biowaste co-composting. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2022; 324:116377. [PMID: 36352711 DOI: 10.1016/j.jenvman.2022.116377] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 09/17/2022] [Accepted: 09/25/2022] [Indexed: 06/16/2023]
Abstract
Microbial communities and environmental conditions are both of great importance for efficient utilization of agroforestry resources. Nevertheless, knowledge about the role of soluble nutrients and enzymatic properties, and their inner links with microbial communities remain limited. This is especially the case for the co-composting of agricultural and forestry biowaste. Here, we investigate the succession of key microbes during co-composting (sawdust + cow manure, SA; straw + cow manure, ST), employing amplicon sequencing, enzyme assays, and physicochemical analyses. N-fixing bacteria (Pseudomonas) and C-degrading fungi (Acaulium) have been identified as dominant taxa during such co-composting. Although eight antibiotic resistance genes were found to persist during composting, pathogenic microbes declined with composting time. NO3--N content was screened as a determinant structuring the bacterial and fungal communities, with importance also shown for C-degrading enzymes such as cellulose, laccase, and peroxidase activity. These results identify the key microbial taxa and their main interactive environmental factors, which are potentially valuable for the development of a mixed microbial inoculant to accelerate the maturation of agroforestry biowastes composting.
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Affiliation(s)
- Yan He
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China
| | - Dong Liu
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China.
| | - Xinhua He
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China; Department of Land, Air and Water Resources, University of California at Davis, Davis, CA, 95616, USA; School of Biological Sciences, University of Western Australia, Perth, WA, 6009, Australia
| | - Yanliang Wang
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China
| | - Jianwei Liu
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China
| | - Xiaofei Shi
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China; Guizhou Kangqunyuan Biotechnology Co., LTD, Liupanshui, 553600, Guizhou, China
| | | | - Fuqiang Yu
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China.
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Zhu P, Wu Y, Ru Y, Hou Y, San KW, Yu X, Guo W. Industrial-scale aerobic composting of livestock manures with the addition of biochar: Variation of bacterial community and antibiotic resistance genes caused by various composting stages. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 314:120270. [PMID: 36162559 DOI: 10.1016/j.envpol.2022.120270] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 09/04/2022] [Accepted: 09/21/2022] [Indexed: 06/16/2023]
Abstract
The presence of large amounts of antibiotic resistance genes (ARGs) in livestock manures poses an impending, tough safety risk to ecosystems. To investigate more comprehensively the mechanisms of ARGs removal from industrial-scale composting of livestock manure based on biochar addition, we tracked the dynamics of bacterial community and ARGs at various stages of aerobic composting of livestock manures with 10% biochar. There were no significant effects of biochar on the bacterial community and the profiles of ARGs. During aerobic composting, the relative abundance of ARGs and mobile genetic elements (MGEs) showed overall trends of decreasing and then increasing. The key factor driving the dynamics of ARGs was bacterial community composition, and the potential hosts of ARGs were Caldicoprobacter, Tepidimicrobium, Ignatzschineria, Pseudogracilibacillus, Actinomadura, Flavobacterium and Planifilum. The retention of the thermophilic bacteria and the repopulation of the initial bacteria were the dominant reasons for the increase in ARGs at maturation stage. Additionally, among the MGEs, the relative abundance of transposon gene was substantially removed, while the integron genes remained at high relative abundance. Our results highlighted that the suitability of biochar addition to industrial-scale aerobic composting needs to be further explored and that effective measures are needed to prevent the increase of ARGs content on maturation stage.
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Affiliation(s)
- Pengcheng Zhu
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, Ministry of Natural Resources, School of Life Sciences, Shandong University, Qingdao, 266237, PR China
| | - Yuxin Wu
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, Ministry of Natural Resources, School of Life Sciences, Shandong University, Qingdao, 266237, PR China
| | - Yuning Ru
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, Ministry of Natural Resources, School of Life Sciences, Shandong University, Qingdao, 266237, PR China
| | - Yihang Hou
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, Ministry of Natural Resources, School of Life Sciences, Shandong University, Qingdao, 266237, PR China
| | - Kim Woon San
- Tounong Organic Fertilizer Co. Ltd., Qingdao, 266733, PR China
| | - Xiaona Yu
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, Ministry of Natural Resources, School of Life Sciences, Shandong University, Qingdao, 266237, PR China
| | - Weihua Guo
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, Ministry of Natural Resources, School of Life Sciences, Shandong University, Qingdao, 266237, PR China.
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Jia H, Chu D, You X, Li Y, Huang C, Zhang J, Zeng X, Yao H, Zhou Z. Biochar improved the composting quality of seaweeds and cow manure mixture and altered the microbial community. Front Microbiol 2022; 13:1064252. [PMID: 36504785 PMCID: PMC9731296 DOI: 10.3389/fmicb.2022.1064252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2022] [Accepted: 10/31/2022] [Indexed: 11/25/2022] Open
Abstract
The beneficial effects of biochar addition during composting have been proved for many feedstocks, like manures and crop straws. However, the effect of biochar on the quality of composting product with seaweed as the feedstock and the bacterial response has not been investigated. In this study, the wheat straw biochar addition on the quality of the composting product and the bacterial response was explored at the rate of 0-10%. The results showed that biochar addition at the optimal rate (5%, w/w) could increase the germination index and the ratio of the optical density of humic acid at 460 nm to that at 660 nm (E4/E6) of the composting product, which indicated the decreased biotoxicity and enhanced compost maturity. The significant increase of the nitrate nitrogen (NO3 --N) content of the composting product proved the improvement of N cycling during composting process with biochar addition. The bacterial community of composting product was shifted and the relative abundance of some beneficial taxa (e.g., Muricauda and Woeseia) was significantly increased with biochar addition. Furthermore, the relative abundance of some bacterial genes related to amino acid metabolism and carbohydrate metabolism was also increased with biochar addition. The results of our study provided the positive effect of biochar addition on the composting of seaweed and could help to produce high quality seaweed fertilizer by composting with biochar addition.
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Affiliation(s)
- Haijiang Jia
- China Tobacco Guangxi Industrial Co., Ltd., Nanning, China
| | - Depeng Chu
- Marine Agriculture Research Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, China
| | - Xiangwei You
- Marine Agriculture Research Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, China
| | - Yiqiang Li
- Marine Agriculture Research Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, China
| | - Chongjun Huang
- China Tobacco Guangxi Industrial Co., Ltd., Nanning, China
| | - Jili Zhang
- China Tobacco Guangxi Industrial Co., Ltd., Nanning, China
| | - Xiangnan Zeng
- China Tobacco Guangxi Industrial Co., Ltd., Nanning, China
| | - Hui Yao
- Marine Agriculture Research Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, China,*Correspondence: Hui Yao, ; Zhaofeng Zhou,
| | - Zhaofeng Zhou
- China Tobacco Guangxi Industrial Co., Ltd., Nanning, China,*Correspondence: Hui Yao, ; Zhaofeng Zhou,
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36
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Meng L, Xu C, Wu F. Microbial co-occurrence networks driven by low-abundance microbial taxa during composting dominate lignocellulose degradation. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 845:157197. [PMID: 35839876 DOI: 10.1016/j.scitotenv.2022.157197] [Citation(s) in RCA: 44] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Revised: 06/27/2022] [Accepted: 07/02/2022] [Indexed: 06/15/2023]
Abstract
Lignocellulose, which contains cellulose, hemicellulose and lignin, is one of the most important factors determining the rate and quality of compost decomposition, and the microbial community composition affects the rate of lignocellulose decomposition. Interactions between microbial taxa contribute significantly to ecosystem energy flow and material cycling. However, it is not clear how interactions between microbial taxa affect the degradation of lignocellulose during the composting process. For this reason we carried out aerobic co-composting experiments with maize straw and cattle manure to explore the contribution of microbial community diversity and the interaction between taxa to lignocellulosic degradation. The results showed that moisture and temperature had the greatest effect on microbial communities during composting and that lignocellulose degradation was dominated by microbial co-occurrence networks rather than microbial community diversity. Overall co-occurrence network and bacterial-fungal interactions explained 23.9-84.1 % of lignocellulosic degradation, whereas microbial diversity only accounted for 24.6-31.5 %. Interestingly, keystone taxa analysis of the microbial co-occurrence networks revealed that low-abundance taxa influenced microbial interactions driving lignocellulose degradation. Our results provide a new perspective for understanding lignocellulose degradation during composting, offering insights into important microbial interaction mechanisms for improving compost quality and efficiency.
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Affiliation(s)
- Lingxu Meng
- College of Ecology and Environment, Inner Mongolia University, Hohhot 010000, China
| | - Chunxue Xu
- College of Ecology and Environment, Inner Mongolia University, Hohhot 010000, China
| | - Fanlin Wu
- College of Ecology and Environment, Inner Mongolia University, Hohhot 010000, China
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37
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Fang C, Su Y, He X, Han L, Qu H, Zhou L, Huang G. Membrane-covered composting significantly decreases methane emissions and microbial pathogens: Insight into the succession of bacterial and fungal communities. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 845:157343. [PMID: 35842148 DOI: 10.1016/j.scitotenv.2022.157343] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Revised: 07/08/2022] [Accepted: 07/09/2022] [Indexed: 06/15/2023]
Abstract
In this study, the effects of semipermeable membrane-covered on methane emissions and potential pathogens during industrial-scale composting of the solid fraction of dairy manure were investigated. The results showed that the oxygen concentration in the membrane-covered group (CT) was maintained above 10 %, and the cumulative methane emission in CT was >99 % lower than that in the control group (CK). Microbial analysis showed that the bacterial genus Thermus and the fungal genus Mycothermus were dominant in CT, and the richness and diversity of the bacterial community were greater than those of the fungal community. At the end of the composting, the relative abundance of potential bacterial pathogens in CT was 32.59 % lower than that in CK, and the relative abundance of potential fungal pathogens in each group was <2 %. Structural equation models revealed that oxygen concentration was a major factor influencing the bacterial diversity in CT, and the increase of oxygen concentration could limit methane emissions by inhibiting the growth of anaerobic bacteria. Therefore, membrane-covered composting could effectively improve compost safety and reduce methane emissions by regulating microbial community structure.
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Affiliation(s)
- Chen Fang
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Ya Su
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Xueqin He
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Lujia Han
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Huiwen Qu
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Ling Zhou
- Modern Agricultural Engineering Key Laboratory at Universities of Education Department of Xinjiang Uygur Autonomous Region, Tarim University, Alar, Xinjiang 843300, China
| | - Guangqun Huang
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China.
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38
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Fang C, Yuan X, Liao K, Qu H, Han L, He X, Huang G. Micro-aerobic conditions based on membrane-covered improves the quality of compost products: Insights into fungal community evolution and dissolved organic matter characteristics. BIORESOURCE TECHNOLOGY 2022; 362:127849. [PMID: 36031127 DOI: 10.1016/j.biortech.2022.127849] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 08/18/2022] [Accepted: 08/22/2022] [Indexed: 06/15/2023]
Abstract
This study investigated the effects of micro-aerobic conditions on fungal community succession and dissolved organic matter transformation during dairy manure membrane-covered composting. The results showed that lignocellulose degradation in the micro-aerobic composting group (AC: oxygen concentration < 5 %) was slower than that in the static composting group (SC: oxygen concentration < 1 %), but the dissolved organic carbon in AC was greatly increased. The degree of aromatic polymerization was higher in AC than in SC. But the carboxyl carbon and alcohol/ether biodegradations were faster in SC than in AC, which promoted carbon dioxide and methane emissions, respectively. The relative abundances of pathogenic and dung saprotrophic fungi in AC were 44.6 % and 10.59 % lower than those in SC on day 30, respectively. Moreover, the relative abundance of soil saprotrophs increased by 5.18 % after micro-aerobic composting. Therefore, micro-aerobic conditions improved the quality of compost products by influencing fungal community evolution and dissolved organic matter transformation.
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Affiliation(s)
- Chen Fang
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Xiangru Yuan
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Keke Liao
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Huiwen Qu
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Lujia Han
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Xueqin He
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China
| | - Guangqun Huang
- Engineering Laboratory for AgroBiomass Recycling & Valorizing, College of Engineering, China Agricultural University, Beijing 100083, China.
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Kumar Awasthi S, Verma S, Zhou Y, Liu T, Kumar Awasthi M, Zhang Z. Effect of scleral protein shell amendment on bacterial community succession during the pig manure composting. BIORESOURCE TECHNOLOGY 2022; 360:127644. [PMID: 35868462 DOI: 10.1016/j.biortech.2022.127644] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 07/13/2022] [Accepted: 07/15/2022] [Indexed: 06/15/2023]
Abstract
The impact of scleral protein shell (SPS) amendment on bacterial community succession during pig manure (PM) composting were evaluated in the present work. Five treatments representing different dry weight dosage of SPS [0 % (T1), 2.5 % (T2), 5 % (T3), 7.5 % (T4), 10 % (T5) and 12 % (T6)] were applied with initial mixture of raw materials (Wheat straw along with the PM) and composted for 42 days. Results indicated that the dominant of phyla were Proteobacteria, Actinobacteria, Bacteroidetes and Firmicutes. The relative abundance (RA) of genus un-identified, Ruminofilibacter, Thermovum, Longispora and Pseudomonas were greater among the all treatments but interestingly genus Ruminofilibacter was also higher in control treatment. The network analysis was confirmed that T6 treatment with higher dosage of SPS amendment could enhance the bacterial population and rate of organic matter mineralization. Compared with T1, the T5 has greater potential impact to enhance the bacterial population and significant correlation among the pH and temperature.
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Affiliation(s)
- Sanjeev Kumar Awasthi
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Shivpal Verma
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Yuwen Zhou
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Tao Liu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Mukesh Kumar Awasthi
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China
| | - Zengqiang Zhang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province 712100, China.
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He Y, Zhang Y, Huang X, Xu J, Zhang H, Dai X, Xie L. Deciphering the internal driving mechanism of microbial community for carbon conversion and nitrogen fixation during food waste composting with multifunctional microbial inoculation. BIORESOURCE TECHNOLOGY 2022; 360:127623. [PMID: 35850391 DOI: 10.1016/j.biortech.2022.127623] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Revised: 07/10/2022] [Accepted: 07/11/2022] [Indexed: 06/15/2023]
Abstract
In this study, the effects of multifunctional microbial inoculation on food waste composting based on the synergistic property between organic matter degradation and nitrogen fixation were investigated. The results showed that inoculation simultaneously strengthened organic matter degradation by 9.9% and improved the nitrogen content by 20.6% compared with that of the control group. Additionally, spectral analysis demonstrated that inoculation was conducive to the enhanced humification, which was supported by the improvement in polyphenol oxidase activity. Microbial analysis showed that most of the introduced microorganisms (Bacillus, Streptomyces, Saccharomonospora) successfully colonized, and stimulated the growth of other indigenous microorganisms (Enterobacter, Paenibacillus). Meanwhile, the change in microbial community structure was accompanied by the enhanced tricarboxylic acid cycle and amino acid metabolism. Furthermore, network analysis and structural equation model revealed that the enhanced cooperation of microorganisms, in which more carbon sources could be provided by cellulose decomposition for nitrogen fixation.
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Affiliation(s)
- Yingying He
- Key Laboratory of Yangtze River Water Environment, Ministry of Education, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China
| | - Yidie Zhang
- Key Laboratory of Yangtze River Water Environment, Ministry of Education, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China
| | - Xia Huang
- Key Laboratory of Yangtze River Water Environment, Ministry of Education, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China
| | - Jun Xu
- Key Laboratory of Yangtze River Water Environment, Ministry of Education, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China
| | - Hongning Zhang
- Key Laboratory of Yangtze River Water Environment, Ministry of Education, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China
| | - Xiaohu Dai
- Key Laboratory of Yangtze River Water Environment, Ministry of Education, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China
| | - Li Xie
- Key Laboratory of Yangtze River Water Environment, Ministry of Education, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China; Shanghai Institute of Pollution Control and Ecological Security, 1239 Siping Road, Shanghai 200092, PR China.
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Liu X, Wang Y, Zhou S, Cui P, Wang W, Huang W, Yu Z, Zhou S. Differentiated strategies of animal-derived and plant-derived biochar to reduce nitrogen loss during paper mill sludge composting. BIORESOURCE TECHNOLOGY 2022; 360:127583. [PMID: 35797902 DOI: 10.1016/j.biortech.2022.127583] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 06/28/2022] [Accepted: 07/01/2022] [Indexed: 06/15/2023]
Abstract
This work aimed to reveal the differences of nitrogen (N) transformation between animal-derived and plant-derived biochar during paper mill sludge composting. Three treatments were established, including CK (no biochar), ABC (animal-derived biochar), and PBC (plant-derived biochar). Results showed that N loss was reduced by 24.43% and 35.50% in ABC and PBC, respectively, compared with CK. Moreover, the contents of acid-insoluble N (AIN) in ABC and bioavailable organic N (BON) in PBC were 6.180 g/kg and 9.269 g/kg higher than in CK (2.602 g/kg and 8.988 g/kg). The protease activity and bacterial abundance associated with the generation of humic N-containing precursors increased in ABC. Low urease activity and a more complex bacterial N-cycling network were found in PBC. Structural equation model confirmed that AIN formation and BON retention were the dominant strategies for animal-derived and plant-derived biochar, respectively. The findings provided multiple pathways to produce N-enriched compost products.
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Affiliation(s)
- Xiaoming Liu
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Science, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Yueqiang Wang
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Science, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Shaoqi Zhou
- College of Resources and Environmental Engineering, Guizhou University, Guizhou 550025, China
| | - Peng Cui
- Guangdong Provincial Engineering and Technology Research Center for Agricultural Land Pollution Prevention and Control, Zhongkai University of Agriculture and Engineering, Guangzhou 510225, China
| | - Weiwu Wang
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Science, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Wenfeng Huang
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Science, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Zhen Yu
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Science, Guangdong Academy of Sciences, Guangzhou 510650, China.
| | - Shungui Zhou
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Science, Guangdong Academy of Sciences, Guangzhou 510650, China; Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China
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Li S, Chen W, Liu D, Tao Y, Ma H, Feng Z, Li S, Zhou K, Wu J, Li J, Wei Y. Effect of superphosphate addition on heavy metals speciation and microbial communities during composting. BIORESOURCE TECHNOLOGY 2022; 359:127478. [PMID: 35714776 DOI: 10.1016/j.biortech.2022.127478] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Revised: 06/10/2022] [Accepted: 06/12/2022] [Indexed: 06/15/2023]
Abstract
Superphosphate fertilizer (SSP) as an additive can reduce the nitrogen loss and increase available phosphorus in composting but few studies investigated the effect of SSP addition on heavy metal and microbial communities. In this study, different ratios (10%, 18%, 26%) of SSP were added into pig manure composting to assess the changes of heavy metal (Cu, Mn, As, Zn, and Fe) fractions, bacterial and fungal communities as well as their interactions. SSP addition at 18% had lower ecological risk but still increased the bioavailability of Cu, Mn, and Fe in composts compared to control. Adding 18% SSP into compost decreased bacterial number and increased the fungal diversity compared to CK. Redundancy analysis indicated heavy metal fractions correlated significantly with bacterial and fungal community compositions in composting with 18% SSP. Network analysis showed adding 18% SSP increased microbial interaction and positive cooperation especially enhanced the proportion of Proteobacteria and Ascomycota.
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Affiliation(s)
- Shuxin Li
- School of Environmental Science & Engineering, Tianjin University, Tianjin 300350, China
| | - Wenjie Chen
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China
| | - Dun Liu
- Beijing Advanced Innovation Center for Big Data-based Precision Medicine, Beihang University, Beijing 100191, China
| | - YueYue Tao
- Institute of Agricultural Sciences in Taihu Lake District, Suzhou Academy of Agricultural Sciences, Suzhou 215155, China
| | - Hongting Ma
- School of Environmental Science & Engineering, Tianjin University, Tianjin 300350, China
| | - Ziwei Feng
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China
| | - Songrong Li
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China
| | - Kaiyun Zhou
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China
| | - Juan Wu
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China
| | - Ji Li
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China
| | - Yuquan Wei
- College of Resources and Environmental Science, Beijing Key Laboratory of Biodiversity and Organic Farming, China Agricultural University, Beijing 100193, China; Organic Recycling Institute (Suzhou) of China Agricultural University, Wuzhong District, Suzhou 215128, China.
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43
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Xu G, Geng S, Cao W, Zuo R, Teng Y, Ding A, Fan F, Dou J. Vertical distribution characteristics and interactions of polycyclic aromatic compounds and bacterial communities in contaminated soil in oil storage tank areas. CHEMOSPHERE 2022; 301:134695. [PMID: 35472616 DOI: 10.1016/j.chemosphere.2022.134695] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2022] [Revised: 04/03/2022] [Accepted: 04/20/2022] [Indexed: 06/14/2023]
Abstract
Polycyclic aromatic compound (PAC) contamination in soil as a result of oil spills is a serious issue because of the huge global demand for fossil energy. This study assessed the vertical variation in polycyclic aromatic hydrocarbons (PAHs), derivatives of PAHs (dPAHs) and bacterial community structure in deep soil with long-term contamination by oil spillage. Our results suggest that the content of total PACs ranged from 1196.6 μg/kg to 14980.9 μg/kg and decreased with depth at all sites. PAHs were the most abundant PACs, with a mean concentration of 6640.7 μg/kg, followed by oxygenated PAHs (mean 156.3 μg/kg) and nitrated PAHs (mean 33.4 μg/kg). PAHs are mainly low molecular weight PACs such as naphthalene, fluorene and phenanthrene, while derivatives of PAHs are all low molecular weight PACs and mainly oxygenated PAHs. Low molecular weight PAHs were an important source of dPAHs under specific conditions. The bacterial community structure showed higher bacterial diversity and lower bacterial richness in shallow soil (2-6 m in depth) than in deep soil (8-10 m in depth). Spearman's analysis confirmed that dramatic bacterial community shifts are a response to contamination. At the genus level, the presence of PACs highly selected for Pseudomonas, belonging to Proteobacteria. Moreover, functional predictions based on Tax4Fun revealed that soil with long-term contamination had a strong potential for PAC degradation. In addition, statistical analysis showed that oxidation-reduction potential (Eh) was closely related to variations of bacterial community composition and function. Finally, Ramlibacter, Pseudomonas, Pseudonocardia, c_MB-A2-108, f_Amb-16S-1323, and Qipengyuania were identified by cooccurrence network analysis as keystone taxa contributing to the maintenance of bacterial ecological function. Together, our results provide evidence of tight bacterial effects of PAHs and dPAHs and a more complete understanding of the fate of PACs in deep contaminated soils.
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Affiliation(s)
- Guangming Xu
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Shuying Geng
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Wei Cao
- School of Environmental and Municipal Engineering, Tianjin Chengjian University, Tianjin, 300384, PR China
| | - Rui Zuo
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Yanguo Teng
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Aizhong Ding
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Fuqiang Fan
- Advanced Institute of Natural Sciences, Beijing Normal University at Zhuhai, Zhuhai, 519087, PR China
| | - Junfeng Dou
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China.
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Zhao Y, Lou Y, Qin W, Cai J, Zhang P, Hu B. Interval aeration improves degradation and humification by enhancing microbial interactions in the composting process. BIORESOURCE TECHNOLOGY 2022; 358:127296. [PMID: 35562028 DOI: 10.1016/j.biortech.2022.127296] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Revised: 05/06/2022] [Accepted: 05/07/2022] [Indexed: 06/15/2023]
Abstract
Five full-scale food waste composts were conducted under different aeration frequencies (no aeration, aeration at different intervals, and continuous aeration) to reveal the optimal strategy and its microbial mechanisms. The highest degradation rate (77.2%) and humus content (29.3%) were observed in Treatment D with interval aeration (aeration 20 min, pause 10 min). Aeration influenced the degradation and humification rate by regulating microbial interactions. The microbial interactions peaked in Treatment D, with a 1.30-fold increase. In terms of the microbial community, Thermobifida was a key genus for improving positive cohesion, fulfilling three criteria (high abundance, high occurrence frequency, and significant differences between treatments). The aeration strategy employed in Treatment D not only increased relative abundance of Thermobifida (1.2 times higher) but also strengthened interaction between it and functional genera (34 nodes). Overall, interval aeration, featured by 20 min aeration and 10 min pause, could increase microbial interactions and improve composting efficiency.
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Affiliation(s)
- Yuxiang Zhao
- Department of Environmental Engineering, Zhejiang University, Hangzhou, China
| | - Yicheng Lou
- Department of Environmental Engineering, Zhejiang University, Hangzhou, China
| | - Weizhen Qin
- Department of Environmental Engineering, Zhejiang University, Hangzhou, China
| | - Jingjie Cai
- Department of Environmental Engineering, Zhejiang University, Hangzhou, China
| | - Pan Zhang
- Department of Environmental Engineering, Zhejiang University, Hangzhou, China
| | - Baolan Hu
- Department of Environmental Engineering, Zhejiang University, Hangzhou, China; Zhejiang Province Key Laboratory for Water Pollution Control and Environmental Safety, Hangzhou, China; Key Laboratory of Environment Remediation and Ecological Health, Ministry of Education, College of Environmental Resource Sciences, Zhejiang University, Hangzhou, China.
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45
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Zhu P, Yang S, Wu Y, Ru Y, Yu X, Wang L, Guo W. Shifts in Soil Microbial Community Composition, Function, and Co-occurrence Network of Phragmites australis in the Yellow River Delta. Front Microbiol 2022; 13:858125. [PMID: 35928147 PMCID: PMC9344067 DOI: 10.3389/fmicb.2022.858125] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Accepted: 06/10/2022] [Indexed: 11/28/2022] Open
Abstract
Soil microorganisms play vital roles in regulating biogeochemical processes. The composition and function of soil microbial community have been well studied, but little is known about the responses of bacterial and fungal communities to different habitats of the same plant, especially the inter-kingdom co-occurrence pattern including bacteria and fungi. Herein, we used high-throughput sequencing to investigate the bacterial and fungal communities of five Phragmites australis habitats in the Yellow River Delta and constructed their inter-kingdom interaction network by network analysis. The results showed that richness did not differ significantly among habitats for either the bacterial or fungal communities. The distribution of soil bacterial community was significantly affected by soil physicochemical properties, whereas that of the fungal community was not. The main functions of the bacterial and fungal communities were to participate in the degradation of organic matter and element cycling, both of which were significantly affected by soil physicochemical properties. Network analysis revealed that bacteria and fungi participated in the formation of networks through positive interactions; the role of intra-kingdom interactions were more important than inter-kingdom interactions. In addition, rare species acted as keystones played a critical role in maintaining the network structure, while NO3−−N likely played an important role in maintaining the network topological properties. Our findings provided insights into the inter-kingdom microbial co-occurrence network and response of the soil microbial community composition and function to different P. australis habitats in coastal wetlands, which will deepen our insights into microbial community assembly in coastal wetlands.
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Affiliation(s)
- Pengcheng Zhu
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, School of Life Sciences, Ministry of Natural Resources, Shandong University, Qingdao, China
| | - Shuren Yang
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, School of Life Sciences, Ministry of Natural Resources, Shandong University, Qingdao, China
| | - Yuxin Wu
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, School of Life Sciences, Ministry of Natural Resources, Shandong University, Qingdao, China
| | - Yuning Ru
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, School of Life Sciences, Ministry of Natural Resources, Shandong University, Qingdao, China
| | - Xiaona Yu
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, School of Life Sciences, Ministry of Natural Resources, Shandong University, Qingdao, China
| | - Lushan Wang
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China
- Lushan Wang,
| | - Weihua Guo
- Key Laboratory of Ecological Prewarning, Protection and Restoration of Bohai Sea, School of Life Sciences, Ministry of Natural Resources, Shandong University, Qingdao, China
- *Correspondence: Weihua Guo, whguo@
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Yuan Y, Zu M, Zuo J, Li R, Tao J. What will polyethylene film mulching bring to the root-associated microbial community of Paeonia ostii? Appl Microbiol Biotechnol 2022; 106:4737-4748. [PMID: 35670852 DOI: 10.1007/s00253-022-11986-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Revised: 05/11/2022] [Accepted: 05/13/2022] [Indexed: 11/26/2022]
Abstract
Plastic film mulching can increase crop yield and is widely used in agricultural production, but long-term mulching could adversely affect plant growth. To investigate the related mechanism, we studied the bacterial communities in different root-associated compartments of Paeonia ostii, a perennial oil crop, under polyethylene film mulching for three years by full-length 16S rDNA sequencing technology, and measured the soil physicochemical properties and enzyme activities. We found that enzyme activities and available nutrients in the soil tended to decrease after long-term mulching. Analysis of bacterial community composition revealed that the endosphere may be another potential source of the root-associated microbiome of P. ostii, and the rhizoplane plays a selective gating role in the enrichment processes for P. ostii microbiome assembly. Long-term mulching affected the abundance of dominant bacterial communities in different root-associated compartments and reduced the bacterial richness in the endosphere, but increased bacterial interactions in each compartment, as well as between different compartments. We speculate that this is mainly related to the decrease of litter content and the serious degradation of polyethylene film after long-term mulching, which resulted in microplastics and other harmful substances entering the soil. Our study further explained the reasons for the harm of long-term film mulching on plants to guide the rational use of plastic film. KEY POINTS: •Soil enzyme activities and available nutrients decreased after long-term mulching. •Mulching affected the dominant bacterial abundance in different root-associated compartments. •Mulching increased bacterial interactions among compartments.
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Affiliation(s)
- Yingdan Yuan
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center of Modern Production Technology of Grain Crops, College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China
| | - Mengting Zu
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center of Modern Production Technology of Grain Crops, College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China
| | - Jiajia Zuo
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center of Modern Production Technology of Grain Crops, College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China
| | - Runze Li
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center of Modern Production Technology of Grain Crops, College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China
| | - Jun Tao
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center of Modern Production Technology of Grain Crops, College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
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47
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Zhang Y, Wei Z, Guo J, Zhang S, Zhao L, Pan C, Wang L, Zhang R, Chen Y. Resource utilization of mink manure: Functional microbial inoculation to elevate the bioavailability of organic nitrogen during composting. BIORESOURCE TECHNOLOGY 2022; 353:127149. [PMID: 35427735 DOI: 10.1016/j.biortech.2022.127149] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2022] [Revised: 04/06/2022] [Accepted: 04/08/2022] [Indexed: 06/14/2023]
Abstract
Mink manure is one of the high nitrogenous wastes, which can easily cause nitrogen mineralization during composting, resulting in low resource reutilization. However, there are few studies on the resource utilization of mink manure. Therefore, this study investigated the effects of functional microbial (bacterial and actinomycetes agents) inoculation on nitrogen mineralization during mink manure composting. Results suggested that the inoculum, especially actinomycetes agents, could increase organic nitrogen and bioavailable organic nitrogen (BON) content. Principal component analysis and Random Forest model demonstrated that the inoculants increase the abundance of microorganisms that positively correlated with BON, decrease the microorganisms that negatively correlated with BON. Consequently, the inoculation of functional microbial agents could effectively reduce nitrogen mineralization and improve composting quality. Therefore, this study provided theoretical and technical support for optimizing mink manure composting, promoting the resource utilization of high nitrogen wastes.
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Affiliation(s)
- Yunxian Zhang
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
| | - Zimin Wei
- College of Life Science, Northeast Agricultural University, Harbin 150030, China.
| | - Jia Guo
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
| | - Shubo Zhang
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
| | - Li Zhao
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
| | - Chaonan Pan
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
| | - Liqin Wang
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
| | - Ruju Zhang
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
| | - Yufeng Chen
- College of Life Science, Northeast Agricultural University, Harbin 150030, China
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48
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Zhang W, Shi M, Wang L, Li Y, Wang H, Niu L, Zhang H, Wang L. New insights into nitrogen removal potential in urban river by revealing the importance of microbial community succession on suspended particulate matter. ENVIRONMENTAL RESEARCH 2022; 204:112371. [PMID: 34774512 DOI: 10.1016/j.envres.2021.112371] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2021] [Revised: 11/07/2021] [Accepted: 11/08/2021] [Indexed: 06/13/2023]
Abstract
The importance of suspended particulate matter (SPM) in nitrogen removal from aquatic environments has been acknowledged in recent years by recognizing the role of attached microbes. However, the succession of attached microbes on suspended particles and their role in nitrogen removal under specific surface microenvironment are still unknown. In this study, the causation among characteristics of SPM, composition and diversity of particle-attached microbial communities, and abundances of nitrogen-related genes in urban rivers was firstly quantitatively established by combing spectroscopy, 16 S rRNA amplicon sequencing, absolute gene quantification and supervised integrated machine learning. SPM in urban rivers, coated with organic layers, was mainly composed of silt and clay (87.59-96.87%) with D50 (medium particle size) of 8.636-30.130 μm. In terms of material composition of SPM, primary mineral was quartz and the four most abundant elements were O, Si, C, Al. The principal functional groups on SPM were hydroxyl and amide. Furthermore, samples with low, medium and high levels of ammoxidation potential were classified into three groups, among which significant differences of microbial communities were found. Samples were also separated into three groups with low, medium and high levels of denitrification potential and significant differences occurred among groups. The particle size, content of functional groups and concentration of SPM were identified as the most significant factors related with microbial communities, playing an important role in succession of particle-attached microbes. In addition, the path model revealed the significantly positive effect of organic matter and particle size on the microbial communities and potential nitrogen removal. The content of hydroxyl and temperature were identified as the most effective predicting factors for ammoxidation potential and denitrification potential respectively by Random Forests Regression models, which had good predictive performances for potential of ammoxidation (R2 = 0.71) and denitrification (R2 = 0.61). These results provide a basis for quickly assessing the ability of nitrogen removal in urban rivers.
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Affiliation(s)
- Wenlong Zhang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing, 210098, PR China
| | - Meng Shi
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing, 210098, PR China
| | - Linqiong Wang
- College of Oceanography, Hohai University, Nanjing, 210098, PR China
| | - Yi Li
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing, 210098, PR China.
| | - Haolan Wang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing, 210098, PR China
| | - Lihua Niu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing, 210098, PR China
| | - Huanjun Zhang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing, 210098, PR China
| | - Longfei Wang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing, 210098, PR China
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49
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Benthic Biofilm Bacterial Communities and Their Linkage with Water-Soluble Organic Matter in Effluent Receivers. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:ijerph19041994. [PMID: 35206183 PMCID: PMC8872271 DOI: 10.3390/ijerph19041994] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/15/2022] [Revised: 02/04/2022] [Accepted: 02/07/2022] [Indexed: 02/04/2023]
Abstract
Benthic biofilms are pioneering microbial aggregates responding to effluent discharge from wastewater treatment plants (WWTPs). However, knowledge of the characteristics and linkage of bacterial communities and water-soluble organic matter (WSOM) of benthic biofilms in effluent-receiving rivers remains unknown. Here, we investigated the quality of WSOM and the evolution of bacterial communities in benthic biofilm to evaluate the ecological impacts of effluent discharge on a representative receiving water. Tryptophan-like proteins showed an increased proportion in biofilms collected from the discharge area and downstream from the WWTP, especially in summer. Biofilm WSOM showed weak humic character and strong autochthonous components, and species turnover was proven to be the main factor governing biofilm bacteria community diversity patterns. The bacterial community alpha diversity, interspecies interaction, biological index, and humification index were signally altered in the biofilms from the discharge area, while the values were more similar in biofilms collected upstream and downstream from the WWTP, indicating that both biofilm bacterial communities and WSOM characters have resilience capacities. Although effluent discharge simplified the network pattern of the biofilm bacterial community, its metabolic functional abundance was basically stable. The functional abundance of carbohydrate metabolism and amino acid metabolism in the discharge area increased, and the key modules in the non-random co-occurrence network also verified the important ecological role of carbon metabolism in the effluent-receiving river. The study sheds light on how benthic biofilms respond to effluent discharge from both ecological and material points of view, providing new insights on the feasibility of utilizing benthic biofilms as robust indicators reflecting river ecological health.
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50
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Chen Z, Fu Q, Wen Q, Wu Y, Bao H, Guo J. Microbial community competition rather than high-temperature predominates ARGs elimination in swine manure composting. JOURNAL OF HAZARDOUS MATERIALS 2022; 423:127149. [PMID: 34530271 DOI: 10.1016/j.jhazmat.2021.127149] [Citation(s) in RCA: 44] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Revised: 08/16/2021] [Accepted: 09/03/2021] [Indexed: 06/13/2023]
Abstract
Aerobic composting is commonly used in pig manure treatment, however, antibiotic resistance genes (ARGs) and their unclear transformation during composting process make the treated manure land using risky. The effects of enhanced thermophilic phase strategy (external heating (HTC) and thermophiles inoculation (MC)) on ARGs removal and the underlying mechanisms were investigated during swine manure composting. HTC increased the total relative abundance (RA) of ARGs by 32.38%, and MC decreased by 21.50% compared to CK by the end of the composting. Mantel test indicated that it was not temperature (P > 0.05), but environmental parameters (pH, Electric Conductivity (EC), etc.) and metabolic products (nitrogen forms) significantly affected the ARGs profile. Partial least-squares path modeling (PLS-PM) suggested that microbial community structure (bacterial abundance and diversities) was the main factor for ARGs evolution. Co-occurrence analysis revealed that HTC could promote the propagation of ARG hosts in later stage of the composting because the strong selection of thermophiles resulted in ecological niches vacancy, and MC enhanced the competition between hosts and nonhosts for ecological niches by increasing thermophiles diversities. These results suggested that competitive inhibition to potential ARGs hosts could be a helpful strategy in ARGs threaten elimination during composting.
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Affiliation(s)
- Zhiqiang Chen
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China
| | - Qiqi Fu
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China
| | - Qinxue Wen
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China.
| | - Yiqi Wu
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China
| | - Huanyu Bao
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China
| | - Jingbo Guo
- School of Civil Engineering and Architecture, Northeast Electric Power University, Jilin 132000, PR China.
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