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Ranjbari S, Almahmeed W, Kesharwani P, Sahebkar A. Advancements in biosensor technologies for fibrinogen detection in cardiovascular disorders. Talanta 2024; 280:126687. [PMID: 39126966 DOI: 10.1016/j.talanta.2024.126687] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2024] [Revised: 08/04/2024] [Accepted: 08/06/2024] [Indexed: 08/12/2024]
Abstract
Rapid and accurate identification of cardiovascular diseases (CVDs) are crucial for timely medical interventions and improved patient outcomes. Fibrinogen (Fib) has emerged as a valuable biomarker for CVDs, playing a significant role in their early detection. Elevated levels of Fib are associated with an increased risk of developing CVD, highlighting its importance for more precise diagnosis and effective treatment strategies. In recent years, significant advancements have been made in developing biosensor-based approaches for detecting Fib, offering high sensitivity and specificity. This review aims to explore the impact of Fib on cardiovascular conditions, assess the current advancements, and discuss the future potential of biosensors in Fib research for diagnosing cardiovascular disorders. Furthermore, we evaluate various biosensor techniques, including optical, electrochemical, electronic, and gravimetric methods, in terms of their utility for measuring Fib in clinical samples such as serum, plasma, whole blood, and other body fluids. A comparative analysis of these techniques is conducted based on their performance characteristics. By providing a comprehensive overview of the relationship between Fib and cardiovascular ailments, this review aims to clarify the advancements in biosensor technology for Fib detection. The comparison of different biosensor techniques will aid researchers and clinicians in selecting the most suitable approach for their specific diagnostic needs. Ultimately, integrating biosensors into clinical practice has the potential to revolutionize the detection and management of CVDs, leading to improved patient care and outcomes.
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Affiliation(s)
- Sara Ranjbari
- Applied Biomedical Research Center, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran
| | - Wael Almahmeed
- Heart and Vascular Institute, Cleveland Clinic Abu Dhabi, Abu Dhabi, United Arab Emirates
| | - Prashant Kesharwani
- Department of Pharmaceutics, School of Pharmaceutical Education and Research, Jamia Hamdard, New Delhi, 110062, India.
| | - Amirhossein Sahebkar
- Center for Global Health Research, Saveetha Medical College and Hospitals, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, India; Biotechnology Research Center, Pharmaceutical Technology Institute, Mashhad University of Medical Sciences, Mashhad, Iran; Applied Biomedical Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.
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2
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Lee E, Choi HK, Kwon Y, Lee KB. Real-Time, Non-Invasive Monitoring of Neuronal Differentiation Using Intein-Enabled Fluorescence Signal Translocation in Genetically Encoded Stem Cell-Based Biosensors. ADVANCED FUNCTIONAL MATERIALS 2024; 34:2400394. [PMID: 39308638 PMCID: PMC11412434 DOI: 10.1002/adfm.202400394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Indexed: 09/25/2024]
Abstract
Real-time and non-invasive monitoring of neuronal differentiation will help increase our understanding of neuronal development and help develop regenerative stem cell therapies for neurodegenerative diseases. Traditionally, reverse transcription-polymerase chain reaction (RT-PCR), western blotting, and immunofluorescence (IF) staining have been widely used to investigate stem cell differentiation; however, their limitations include endpoint analysis, invasive nature of monitoring, and lack of single-cell-level resolution. Several limitations hamper current approaches to studying neural stem cell (NSC) differentiation. In particular, fixation and staining procedures can introduce artificial changes in cellular morphology, hindering our ability to accurately monitor the progression of the process and fully understand its functional aspects, particularly those related to cellular connectivity and neural network formation. Herein, we report a novel approach to monitor neuronal differentiation of NSCs non-invasively in real-time using cell-based biosensors (CBBs). Our research efforts focused on utilizing intein-mediated protein engineering to design and construct a highly sensitive biosensor capable of detecting a biomarker of neuronal differentiation, hippocalcin. Hippocalcin is a critical protein involved in neurogenesis, and the CBB functions by translocating a fluorescence signal to report the presence of hippocalcin externally. To construct the hippocalcin sensor proteins, hippocalcin bioreceptors, AP2 and glutamate ionotropic receptor AMPA-type subunit 2 (GRIA2), were fused to each split-intein carrying split-nuclear localization signal (NLS) peptides, respectively, and a fluorescent protein was introduced as a reporter. Protein splicing (PS) was triggered in the presence of hippocalcin to generate functional signal peptides, which promptly translocated the fluorescence signal to the nucleus. The stem cell-based biosensor showed fluorescence signal translocation only upon neuronal differentiation. Undifferentiated stem cells or cells that had differentiated into astrocytes or oligodendrocytes did not show fluorescence signal translocation. The number of differentiated neurons was consistent with that measured by conventional IF staining. Furthermore, this approach allowed for the monitoring of neuronal differentiation at an earlier stage than that detected using conventional approaches, and the translocation of fluorescence signal was monitored before the noticeable expression of class III β-tubulin (TuJ1), an early neuronal differentiation marker. We believe that these novel CBBs offer an alternative to current techniques by capturing the dynamics of differentiation progress at the single-cell level and by providing a tool to evaluate how NSCs efficiently differentiate into specific cell types, particularly neurons.
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Affiliation(s)
- Euiyeon Lee
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA
- Department of Biomedical Engineering, Dongguk University, Seoul 04620, Korea
| | - Hye Kyu Choi
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA
| | - Youngeun Kwon
- Department of Biomedical Engineering, Dongguk University, Seoul 04620, Korea
| | - Ki-Bum Lee
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA
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3
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Mohammadinejad A, Aleyaghoob G, Nooranian S, Dima L, Moga MA, Badea M. Development of biosensors for detection of fibrinogen: a review. Anal Bioanal Chem 2024; 416:21-36. [PMID: 37837539 DOI: 10.1007/s00216-023-04976-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Accepted: 09/20/2023] [Indexed: 10/16/2023]
Abstract
Fibrinogen as a major inflammation marker and blood coagulation factor has a direct impact on the health of humanity. The variations in fibrinogen content lead to risky conditions such as bleeding and cardiovascular diseases. So, accurate methods for monitoring of this glycoprotein are of high importance. The conventional methods, such as the Clauss method, are time consuming and require highly specialized expert analysts. The development of fast, simple, easy to use, and inexpensive methods is highly desired. In this way, biosensors have gained outstanding attention since they offer means for performing analyses at the points-of-care using self-testing devices, which can be applied outside of clinical laboratories or hospital. This review indicates that different electrochemical and optical sensors have been successfully implemented for the detection of fibrinogen under normal levels of fibrinogen in plasma. The biosensors for the detection of fibrinogen have been designed based on the quartz crystal microbalance, field-effect transistor, electrochemical impedance spectroscopy, amperometry, surface plasmon resonance, localized surface plasmon resonance, and colorimetric techniques. Also, this review demonstrates the utility of the application of nanoparticles in different detection techniques.
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Affiliation(s)
- Arash Mohammadinejad
- Department of Fundamental, Prophylactic and Clinical Disciplines, Faculty of Medicine, Transilvania University of Brasov, Brașov, Romania
- Research Center for Fundamental Research and Prevention Strategies in Medicine, Research and Development Institute of Transilvania University of Brasov, Brașov, Romania
| | - Ghazaleh Aleyaghoob
- Department of Medical Biotechnology and Nanotechnology, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran
- Department of Chemistry, Payame Noor University, Tehran, 19395-4697, Iran
| | - Samin Nooranian
- Department of Medical Biotechnology and Nanotechnology, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran
| | - Lorena Dima
- Department of Fundamental, Prophylactic and Clinical Disciplines, Faculty of Medicine, Transilvania University of Brasov, Brașov, Romania
- Research Center for Fundamental Research and Prevention Strategies in Medicine, Research and Development Institute of Transilvania University of Brasov, Brașov, Romania
| | - Marius Alexandru Moga
- Department of Medical and Surgical Specialties, Faculty of Medicine, Transilvania University of Brasov, Brașov, Romania
- Centre for Applied Medicine and Intervention Strategies in Medical Practice, Research and Development Institute of Transilvania University of Brasov, Brașov, Romania
| | - Mihaela Badea
- Department of Fundamental, Prophylactic and Clinical Disciplines, Faculty of Medicine, Transilvania University of Brasov, Brașov, Romania.
- Research Center for Fundamental Research and Prevention Strategies in Medicine, Research and Development Institute of Transilvania University of Brasov, Brașov, Romania.
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Çimen D, Üzek R, Günaydın S, Denizli A. Real‐Time Detection of Fibrinogen via Imprinted Recognition Sites. ChemistrySelect 2021. [DOI: 10.1002/slct.202101942] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Duygu Çimen
- Hacettepe University Department of Chemistry, Beytepe Ankara Turkey
| | - Recep Üzek
- Hacettepe University Department of Chemistry, Beytepe Ankara Turkey
| | - Serdar Günaydın
- Department of Cardiovascular Surgery University of Health Sciences Ankara City Hospital Ankara Turkey
| | - Adil Denizli
- Hacettepe University Department of Chemistry, Beytepe Ankara Turkey
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Lee S, Bristol RE, Preul MC, Chae J. Three-Dimensionally Printed Microelectromechanical-System Hydrogel Valve for Communicating Hydrocephalus. ACS Sens 2020; 5:1398-1404. [PMID: 32141291 DOI: 10.1021/acssensors.0c00181] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Hydrocephalus (HCP) is a chronic neurological brain disorder caused by a malfunction of the cerebrospinal fluid (CSF) drainage mechanism in the brain. The current standard method to treat HCP is a shunt system. Unfortunately, the shunt system suffers from complications including mechanical malfunctions, obstructions, infections, blockage, breakage, overdrainage, and/or underdrainage. Some of these complications may be attributed to the shunts' physically large and lengthy course making them susceptible to external forces, siphoning effects, and risks of infection. Additionally, intracranial catheters artificially traverse the brain and drain the ventricle rather than the subarachnoid space. We report a 3D-printed microelectromechanical system-based implantable valve to improve HCP treatment. This device provides an alternative approach targeting restoration of near-natural CSF dynamics by artificial arachnoid granulations (AGs), natural components for CSF drainage in the brain. The valve, made of hydrogel, aims to regulate the CSF flow between the subarachnoid space and the superior sagittal sinus, in essence, substituting for the obstructed arachnoid granulations. The valve, operating in a fully passive manner, utilizes the hydrogel swelling feature to create nonzero cracking pressure, PT ≈ 47.4 ± 6.8 mmH2O, as well as minimize reverse flow leakage, QO ≈ 0.7 μL/min on benchtop experiments. The additional measurements performed in realistic experimental setups using a fixed sheep brain also deliver comparable results, PT ≈ 113.0 ± 9.8 mmH2O and QO ≈ 3.7 μL/min. In automated loop functional tests, the valve maintains functionality for a maximum of 1536 cycles with the PT variance of 44.5 mmH2O < PT < 61.1 mmH2O and negligible average reverse flow leakage rates of ∼0.3 μL/min.
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Affiliation(s)
- Seunghyun Lee
- School of Electrical Computer and Energy Engineering, Arizona State University, Tempe, Arizona 85281, United States
| | - Ruth E. Bristol
- Phoenix Children’s Hospital, Phoenix, Arizona 85016, United States
| | - Mark C. Preul
- Dignity Health, Phoenix, Arizona 85013, United States
| | - Junseok Chae
- School of Electrical Computer and Energy Engineering, Arizona State University, Tempe, Arizona 85281, United States
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6
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Liu S, Meng X, Zhang J, Chae J. A wireless fully-passive acquisition of biopotentials. Biosens Bioelectron 2019; 139:111336. [PMID: 31128477 DOI: 10.1016/j.bios.2019.111336] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Revised: 05/13/2019] [Accepted: 05/16/2019] [Indexed: 12/15/2022]
Abstract
Biopotential signals contain essential information for assessing functionality of organs and diagnosing diseases. We present a flexible sensor, capable of measuring biopotentials, in real time, in wireless and fully-passive manner. The flexible sensor collects and transmits biopotentials to an external reader without wire, battery, or harvesting/regulating element. The sensor is fabricated on a 90 μm-thick polyimide substrate with footprint of 18 × 15 × 0.5 mm3. The wireless fully-passive acquisition of biopotentials is enabled by the RF (Radio Frequency) microwave backscattering effect where the biopotentials are modulated by an array of varactors with incoming RF carrier that is backscattered to the external reader. The flexile sensor is verified and validated by emulated signal and Electrocardiogram (ECG), Electromyogram (EMG), and Electrooculogram (EOG), respectively. A deep learning algorithm analyzes the signal quality of wirelessly acquired data, along with the data from commercially-available wired sensor counterparts. Wired and wireless data shows <3% discrepancy in deep learning testing accuracy for ECG and EMG up to the wireless distance of 240 mm. Wireless acquisition of EOG further demonstrates accurate tracking of horizontal eye movement with deep learning training and testing accuracy reaching up to 93.6% and 92.2%, respectively, indicating successful detection of biopotentials signal as low as 250 μVPP. These findings support that the real-time wireless fully-passive acquisition of on-body biopotentials is indeed feasible and may find various uses for future clinical research.
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Affiliation(s)
- Shiyi Liu
- School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA.
| | - Xueling Meng
- School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA
| | - Jianwei Zhang
- School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA
| | - Junseok Chae
- School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA
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7
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Wu C, Li X, Song S, Pei Y, Guo L, Pei Z. QCM Biosensor Based on Polydopamine Surface for Real-Time Analysis of the Binding Kinetics of Protein-Protein Interactions. Polymers (Basel) 2017; 9:E482. [PMID: 30965783 PMCID: PMC6418727 DOI: 10.3390/polym9100482] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2017] [Revised: 09/28/2017] [Accepted: 09/29/2017] [Indexed: 12/19/2022] Open
Abstract
A quartz crystal microbalance (QCM) biosensor based on polydopamine (PDA) surface was developed for real-time analysis of the binding kinetics of protein-protein interactions. The biosensor was fabricated by simply immersing the gold sensor chip into an aqueous dopamine solution at pH 8.5 leading to a spontaneous deposition of PDA film onto the sensor chip surface, which was followed by incubation with the protein to immobilize it onto the PDA-coated sensor chip surface via Michael addition and/or Schiff base reactions. In this paper, the interaction between monoclonal anti-myoglobin 7005 antibody (IgG1) and its antigen human cardiac myoglobin was used as a model system for real-time analysis of biomolecule interactions on the biosensor surface. The kinetic parameters of the interaction between anti-myoglobin 7005 and myoglobin were studied on the biosensor surface, which were consistent with the results obtained via amine coupling. The biosensor based on PDA surface has excellent regenerability, reproducibility, and specificity. Compared with the most frequently/typically used amine coupling method for immobilization of proteins on carboxylated substrates, the modification methodology presented in this paper is simple, mild and is not subjected to the limitations of the isoelectric point (pI) of the protein. In addition, the PDA biosensor chip can be easily reused, which makes QCM biosensor analysis more efficient and cost effective.
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Affiliation(s)
- Chunli Wu
- School of Pharmaceutical Sciences, Zhengzhou University, 100 Kexue Avenue, Zhengzhou 450001, China.
| | - Xueming Li
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A & F University, Yangling 712100, China.
| | - Siyu Song
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A & F University, Yangling 712100, China.
| | - Yuxin Pei
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A & F University, Yangling 712100, China.
| | - Lili Guo
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A & F University, Yangling 712100, China.
| | - Zhichao Pei
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A & F University, Yangling 712100, China.
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Abstract
The design and application of sensors for monitoring biomolecules in clinical samples is a common goal of the sensing research community. Surface plasmon resonance (SPR) and other plasmonic techniques such as localized surface plasmon resonance (LSPR) and imaging SPR are reaching a maturity level sufficient for their application in monitoring biomolecules in clinical samples. In recent years, the first examples for monitoring antibodies, proteins, enzymes, drugs, small molecules, peptides, and nucleic acids in biofluids collected from patients afflicted with a series of medical conditions (Alzheimer's, hepatitis, diabetes, leukemia, and cancers such as prostate and breast cancers, among others) demonstrate the progress of SPR sensing in clinical chemistry. This Perspective reviews the current status of the field, showcasing a series of early successes in the application of SPR for clinical analysis and detailing a series of considerations regarding sensing schemes, exposing issues with analysis in biofluids, and comparing SPR with ELISA, while providing an outlook of the challenges currently associated with plasmonic materials, instrumentation, microfluidics, bioreceptor selection, selection of a clinical market, and validation of a clinical assay for applying SPR sensors to clinical samples. Research opportunities are proposed to further advance the field and transition SPR biosensors from research proof-of-concept stage to actual clinical applications.
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Affiliation(s)
- Jean-Francois Masson
- Département
de chimie, Université de Montréal, C.P. 6128 Succ. Centre-Ville, Montreal, Quebec H3C 3J7, Canada
- Centre
for self-assembled chemical structures (CSACS), McGill University, 801
Sherbrooke Street West, Montreal, Quebec H3A 2K6, Canada
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Aubé A, Charbonneau DM, Pelletier JN, Masson JF. Response Monitoring of Acute Lymphoblastic Leukemia Patients Undergoing l-Asparaginase Therapy: Successes and Challenges Associated with Clinical Sample Analysis in Plasmonic Sensing. ACS Sens 2016. [DOI: 10.1021/acssensors.6b00531] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Alexandra Aubé
- Département
de Chimie and Département de Biochimie, Université de Montréal, C.P. 6128 Succ. Centre-ville, Montreal, Quebec H3C 3J7, Canada
| | - David M. Charbonneau
- Département
de Chimie and Département de Biochimie, Université de Montréal, C.P. 6128 Succ. Centre-ville, Montreal, Quebec H3C 3J7, Canada
- PROTEO, The Québec Network for Research on Protein Function, Engineering and Applications, Québec G1V 0A6, Canada
| | - Joelle N. Pelletier
- Département
de Chimie and Département de Biochimie, Université de Montréal, C.P. 6128 Succ. Centre-ville, Montreal, Quebec H3C 3J7, Canada
- PROTEO, The Québec Network for Research on Protein Function, Engineering and Applications, Québec G1V 0A6, Canada
| | - Jean-François Masson
- Département
de Chimie and Département de Biochimie, Université de Montréal, C.P. 6128 Succ. Centre-ville, Montreal, Quebec H3C 3J7, Canada
- Centre
for Self-Assembled Chemical Structures (CSACS), McGill University, 801
Sherbrooke Street West, Montreal, Québec, H3A 2K6, Canada
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10
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Nguyen TT, Bea SO, Kim DM, Yoon WJ, Park JW, An SSA, Ju H. A regenerative label-free fiber optic sensor using surface plasmon resonance for clinical diagnosis of fibrinogen. Int J Nanomedicine 2015; 10 Spec Iss:155-63. [PMID: 26347331 PMCID: PMC4556302 DOI: 10.2147/ijn.s88963] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
Purpose We present the regenerative label-free fiber optical biosensor that exploits surface plasmon resonance for quantitative detection of fibrinogen (Fbg) extracted from human blood plasma. Materials and methods The sensor head was made up of a multimode optical fiber with its polymer cladding replaced by metal composite of nanometer thickness made of silver, aluminum, and nickel. The Ni layer coated allowed a direct immobilization of histidine-tagged peptide (HP) on its metal surface without an additional cross-linker in between. On the coated HP layer, immunoglobulin G was then immobilized for specific capturing of Fbg. Results We demonstrated a real-time quantitative detection of Fbg concentrations with limit of detection of ~10 ng/mL. The fact that the HP layer could be removed by imidazole with acid also permitted us to demonstrate the regeneration of the outermost metal surface of the sensor head for the sensor reusability. Conclusion The sensor detection limit was estimated to be ~10 pM, which was believed to be sensitive enough for detecting Fbg during the clinical diagnosis of cardiovascular diseases, myocardial infarction, strokes, and Alzheimer’s diseases.
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Affiliation(s)
- Tan Tai Nguyen
- Department of Bionano Technology, College of Bionano Technology, Gachon University, Seongnam, South Korea
| | - Sun Oh Bea
- Department of Bionano Technology, College of Bionano Technology, Gachon University, Seongnam, South Korea
| | - Dong Min Kim
- Department of Materials Science and Engineering, Hongik University, Sejong City, South Korea
| | - Won Jung Yoon
- Department of Chemical and Bio Engineering, Gachon University, Seongnam, South Korea
| | - Jin-Won Park
- Department of Chemical and Biomolecular Engineering, College of Energy and Biotechnology, Seoul National University of Science and Technology, Seoul, South Korea
| | - Seong Soo A An
- Department of Bionano Technology, College of Bionano Technology, Gachon University, Seongnam, South Korea
| | - Heongkyu Ju
- Department of Bionano Technology, College of Bionano Technology, Gachon University, Seongnam, South Korea ; Department of Nanophysics, College of Bionano Technology, Gachon University, Seongnam, South Korea ; Neuroscience Institute, Gil Hospital, Incheon, South Korea
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11
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Jeon SD, Kim SJ, Park SH, Choi GW, Han SO. An enhanced protein-protein interaction based on enzymatic complex through replacement of the recognition site. Int J Biol Macromol 2015; 75:1-6. [PMID: 25603141 DOI: 10.1016/j.ijbiomac.2015.01.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2014] [Revised: 12/30/2014] [Accepted: 01/01/2015] [Indexed: 12/01/2022]
Abstract
Clostridium cellulovorans, produce multi-enzymatic complexes known as cellulosomes, which assemble via the interaction of a dockerin module in the cellulosomal subunit with one of the several cohesin modules in the scaffolding protein, to degrade the plant cell wall polymer. An enhanced cohesin-dockerin interaction was demonstrated by modified certain cellulosomal enzymes with altered amino acid residues at the crucial binding site, 11th and 12th positions in dockerin module. In fluorescence intensity analyses using the cellulosome-based biomarker system, the modified cellulosomal enzymes (EngE SL to AI and EngH SM to AI) showed an increased intensity (1.4- to 2.2-fold) compared with the wild-type proteins. Conversely, modified ExgS (AI to SM) exhibited a reduced intensity (0.6- to 0.7-fold) compared with the wild type. In enzyme-linked and competitive enzyme-linked interaction assays, the some modified protein (EngE SL to AI and EngH SM to AI) showed their increased binding affinity toward the cohesins (Coh2 and Coh9). Surface plasmon resonance analysis quantitatively demonstrated the binding affinity of these two modified proteins toward cohesins showed similar or higher affinity comparing with its with wild type proteins. These results suggest the replacement of amino acid residues in the certain recognition site significantly affects the binding affinity of the cohesin-dockerin interaction.
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Affiliation(s)
- Sang Duck Jeon
- Department of Biotechnology, Korea University, Seoul 136-701, Republic of Korea
| | - Su Jung Kim
- Department of Biotechnology, Korea University, Seoul 136-701, Republic of Korea
| | - Sung Hyun Park
- Department of Biotechnology, Korea University, Seoul 136-701, Republic of Korea
| | - Gi-Wook Choi
- Changhae Advanced Institute of Technology, Changhae Ethanol Co., Ltd., Jeonju 561-203, Republic of Korea
| | - Sung Ok Han
- Department of Biotechnology, Korea University, Seoul 136-701, Republic of Korea.
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12
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Esfahani H, Prabhakaran MP, Salahi E, Tayebifard A, Keyanpour-Rad M, Rahimipour MR, Ramakrishna S. Protein adsorption on electrospun zinc doped hydroxyapatite containing nylon 6 membrane: Kinetics and isotherm. J Colloid Interface Sci 2015; 443:143-52. [DOI: 10.1016/j.jcis.2014.12.014] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2014] [Revised: 12/03/2014] [Accepted: 12/04/2014] [Indexed: 01/01/2023]
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13
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Ojeda I, Garcinuño B, Moreno-Guzmán M, González-Cortés A, Yudasaka M, Iijima S, Langa F, Yáñez-Sedeño P, Pingarrón JM. Carbon Nanohorns as a Scaffold for the Construction of Disposable Electrochemical Immunosensing Platforms. Application to the Determination of Fibrinogen in Human Plasma and Urine. Anal Chem 2014; 86:7749-56. [DOI: 10.1021/ac501681n] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Irene Ojeda
- Department
of Analytical Chemistry, Faculty of Chemistry, University Complutense of Madrid, 28040-Madrid, Spain
| | - Belit Garcinuño
- Department
of Analytical Chemistry, Faculty of Chemistry, University Complutense of Madrid, 28040-Madrid, Spain
| | - María Moreno-Guzmán
- Department
of Analytical Chemistry, Faculty of Chemistry, University Complutense of Madrid, 28040-Madrid, Spain
| | - A. González-Cortés
- Department
of Analytical Chemistry, Faculty of Chemistry, University Complutense of Madrid, 28040-Madrid, Spain
| | - Masako Yudasaka
- Nanotube Research Center, National Institute of Advanced Industrial and Technology, Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Sumio Iijima
- Department
of Physics, Meijo University, Shiogamaguchi, Tenpaku-ku, Nagoya 468-8502, Japan
| | - Fernando Langa
- Instituto
de Nanociencia, Nanotecnología y Materiales Moleculares (INAMOL), Universidad de Castilla-La Mancha, 45071-Toledo, Spain
| | - Paloma Yáñez-Sedeño
- Department
of Analytical Chemistry, Faculty of Chemistry, University Complutense of Madrid, 28040-Madrid, Spain
| | - José M. Pingarrón
- Department
of Analytical Chemistry, Faculty of Chemistry, University Complutense of Madrid, 28040-Madrid, Spain
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14
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Wang R, Wang W, Ren H, Chae J. Detection of copper ions in drinking water using the competitive adsorption of proteins. Biosens Bioelectron 2014; 57:179-85. [DOI: 10.1016/j.bios.2014.01.056] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2013] [Revised: 01/27/2014] [Accepted: 01/28/2014] [Indexed: 10/25/2022]
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15
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Dargahi M, Omanovic S. A comparative PM-IRRAS and ellipsometry study of the adsorptive behaviour of bovine serum albumin on a gold surface. Colloids Surf B Biointerfaces 2014; 116:383-8. [DOI: 10.1016/j.colsurfb.2013.12.028] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2013] [Revised: 12/12/2013] [Accepted: 12/16/2013] [Indexed: 10/25/2022]
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16
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Jeon SD, Lee JE, Kim SJ, Kim SW, Han SO. Analysis of selective, high protein-protein binding interaction of cohesin-dockerin complex using biosensing methods. Biosens Bioelectron 2012; 35:382-389. [PMID: 22480778 DOI: 10.1016/j.bios.2012.03.023] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2011] [Revised: 03/07/2012] [Accepted: 03/12/2012] [Indexed: 10/28/2022]
Abstract
Optical biosensors that use fluorescence are promising tools for the analysis of target materials such as protein, DNA and other biomaterial. To analyze the binding properties of a protein-protein interaction, we constructed fluorescent biomarkers based on the cohesin-dockerin interaction, which coordinates the assembly of cellulolytic enzymes and scaffolding proteins to produce a cell surface multiprotein complex known as the "cellulosome" in some anaerobic bacteria. Our 2D-PAGE results displayed diverse binding profiles to the dockerin containing cellulosomal proteins produced by Clostridium cellulovorans grown on different carbon sources, such as Avicel, xylan and AXP (Avicel:xylan:pectin (3:1:1)). Fluorescence intensity analysis indicated that EngE and EngH bound more efficiently to Coh6 than to Coh2 or Coh9 (2-fold to 6-fold and 1.5-fold to 5-fold, respectively), while others cellulosomal proteins displayed similar results. In addition, both an enzyme-linked interaction assay (ELIA) and surface plasmon resonance (SPR) analyses demonstrated that both EngE and EngH preferentially bound cohesin6 versus the other two cohesin molecules. This work demonstrated the analysis of the binding patterns between interacting proteins using fluorescent biomarkers. We also illustrated the potential of this sensitive approach to quantify specific target analytical materials via the example of the cohesin-dockerin interaction.
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Affiliation(s)
- Sang Duck Jeon
- School of Life Sciences and Biotechnology, Korea University, Seoul, 136-701, Republic of Korea
| | - Ji Eun Lee
- School of Life Sciences and Biotechnology, Korea University, Seoul, 136-701, Republic of Korea
| | - Su Jung Kim
- School of Life Sciences and Biotechnology, Korea University, Seoul, 136-701, Republic of Korea
| | - Seung Wook Kim
- Department of Chemical and Biological Engineering, Korea University, Seoul 136-701, Republic of Korea
| | - Sung Ok Han
- School of Life Sciences and Biotechnology, Korea University, Seoul, 136-701, Republic of Korea.
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A method for regenerating gold surface for prolonged reuse of gold-coated surface plasmon resonance chip. Anal Biochem 2012; 423:23-5. [PMID: 22285980 DOI: 10.1016/j.ab.2011.12.045] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2011] [Revised: 12/10/2011] [Accepted: 12/29/2011] [Indexed: 11/24/2022]
Abstract
We developed a method to completely regenerate the gold (Au) surface of 3-aminopropyltriethoxysilane (APTES)-functionalized Au-coated surface plasmon resonance (SPR) chip that had been used for human fetuin A (HFA) immunoassay. It involved treatment of the used SPR chip with freshly prepared piranha solution (concentrated H(2)SO(4)/30% H(2)O(2)=3:1, v/v) for 15 min followed by extensive rinsing with ethanol and deionized water. The developed method enabled prolonged reuse of the regenerated SPR chip that increased its cost-effectiveness without affecting the reproducibility of HFA immunoassays.
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