1
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Tojima T, Suda Y, Jin N, Kurokawa K, Nakano A. Spatiotemporal dissection of the Golgi apparatus and the ER-Golgi intermediate compartment in budding yeast. eLife 2024; 13:e92900. [PMID: 38501165 PMCID: PMC10950332 DOI: 10.7554/elife.92900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Accepted: 02/23/2024] [Indexed: 03/20/2024] Open
Abstract
Cargo traffic through the Golgi apparatus is mediated by cisternal maturation, but it remains largely unclear how the cis-cisternae, the earliest Golgi sub-compartment, is generated and how the Golgi matures into the trans-Golgi network (TGN). Here, we use high-speed and high-resolution confocal microscopy to analyze the spatiotemporal dynamics of a diverse set of proteins that reside in and around the Golgi in budding yeast. We find many mobile punctate structures that harbor yeast counterparts of mammalian endoplasmic reticulum (ER)-Golgi intermediate compartment (ERGIC) proteins, which we term 'yeast ERGIC'. It occasionally exhibits approach and contact behavior toward the ER exit sites and gradually matures into the cis-Golgi. Upon treatment with the Golgi-disrupting agent brefeldin A, the ERGIC proteins form larger aggregates corresponding to the Golgi entry core compartment in plants, while cis- and medial-Golgi proteins are absorbed into the ER. We further analyze the dynamics of several late Golgi proteins to better understand the Golgi-TGN transition. Together with our previous studies, we demonstrate a detailed spatiotemporal profile of the entire cisternal maturation process from the ERGIC to the Golgi and further to the TGN.
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Grants
- KAKENHI 19K06669 Ministry of Education, Culture, Sports, Science and Technology
- KAKENHI 19H04764 Ministry of Education, Culture, Sports, Science and Technology
- KAKENHI 22K06213 Ministry of Education, Culture, Sports, Science and Technology
- CREST JPMJCR21E3 Japan Science and Technology Agency
- KAKENHI 17H06420 Ministry of Education, Culture, Sports, Science and Technology
- KAKENHI 18H05275 Ministry of Education, Culture, Sports, Science and Technology
- KAKENHI 23H00382 Ministry of Education, Culture, Sports, Science and Technology
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Affiliation(s)
- Takuro Tojima
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced PhotonicsWakoJapan
| | - Yasuyuki Suda
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced PhotonicsWakoJapan
- Laboratory of Molecular Cell Biology, Faculty of Medicine, University of TsukubaTsukubaJapan
| | - Natsuko Jin
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced PhotonicsWakoJapan
| | - Kazuo Kurokawa
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced PhotonicsWakoJapan
| | - Akihiko Nakano
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced PhotonicsWakoJapan
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2
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Wu L, Bian W, Abubakar YS, Lin J, Yan H, Zhang H, Wang Z, Wu C, Shim W, Lu GD. FvKex2 is required for development, virulence, and mycotoxin production in Fusarium verticillioides. Appl Microbiol Biotechnol 2024; 108:228. [PMID: 38386129 PMCID: PMC10884074 DOI: 10.1007/s00253-024-13022-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 01/03/2024] [Accepted: 01/18/2024] [Indexed: 02/23/2024]
Abstract
Fusarium verticillioides is one of the most important fungal pathogens causing maize ear and stalk rots, thereby undermining global food security. Infected seeds are usually unhealthy for consumption due to contamination with fumonisin B1 (FB1) mycotoxin produced by the fungus as a virulence factor. Unveiling the molecular factors that determine fungal development and pathogenesis will help in the control and management of the diseases. Kex2 is a kexin-like Golgi-resident proprotein convertase that is involved in the activation of some important proproteins. Herein, we identified and functionally characterized FvKex2 in relation to F. verticillioides development and virulence by bioinformatics and functional genomics approaches. We found that FvKex2 is required for the fungal normal vegetative growth, because the growth of the ∆Fvkex2 mutant was significantly reduced on culture media compared to the wild-type and complemented strains. The mutant also produced very few conidia with morphologically abnormal shapes when compared with those from the wild type. However, the kexin-like protein was dispensable for the male role in sexual reproduction in F. verticillioides. In contrast, pathogenicity was nearly abolished on wounded maize stalks and sugarcane leaves in the absence of FvKEX2 gene, suggesting an essential role of Fvkex2 in the virulence of F. verticillioides. Furthermore, high-performance liquid chromatography analysis revealed that the ∆Fvkex2 mutant produced a significantly lower level of FB1 mycotoxin compared to the wild-type and complemented strains, consistent with the loss of virulence observed in the mutant. Taken together, our results indicate that FvKex2 is critical for vegetative growth, FB1 biosynthesis, and virulence, but dispensable for sexual reproduction in F. verticillioides. The study presents the kexin-like protein as a potential drug target for the management of the devastating maize ear and stalk rot diseases. Further studies should aim at uncovering the link between FvKex2 activity and FB1 biosynthesis genes. KEY POINTS: •The kexin-like protein FvKex2 contributes significantly to the vegetative growth of Fusarium verticillioides. •The conserved protein is required for fungal conidiation and conidial morphology, but dispensable for sexual reproduction. •Deletion of FvKEX2 greatly attenuates the virulence and mycotoxin production potential of F. verticillioides.
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Affiliation(s)
- Limin Wu
- Fujian Vocational College of Bioengineering, Fuzhou, 350002, China
| | - Wenyin Bian
- Key Laboratory of Bio-Pesticide and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fujian, Fuzhou, 350002, China
| | - Yakubu Saddeeq Abubakar
- Key Laboratory of Bio-Pesticide and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fujian, Fuzhou, 350002, China
- Department of Biochemistry, Ahmadu Bello University, Zaria, 810281, Nigeria
| | - Jiayi Lin
- Guangzhou University of Chinese Medicine, Guangzhou, 510006, China
| | - Huijuan Yan
- Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, 77843-2132, USA
| | - Huan Zhang
- Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, 77843-2132, USA
| | - Zonghua Wang
- Key Laboratory of Bio-Pesticide and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fujian, Fuzhou, 350002, China
| | - Changbiao Wu
- Fujian Vocational College of Bioengineering, Fuzhou, 350002, China
| | - WonBo Shim
- Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, 77843-2132, USA.
| | - Guo-Dong Lu
- Key Laboratory of Bio-Pesticide and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fujian, Fuzhou, 350002, China.
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3
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Bian J, Su X, Yuan X, Zhang Y, Lin J, Li X. Endoplasmic reticulum membrane contact sites: cross-talk between membrane-bound organelles in plant cells. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:2956-2967. [PMID: 36847172 DOI: 10.1093/jxb/erad068] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Accepted: 02/20/2023] [Indexed: 05/21/2023]
Abstract
Eukaryotic cells contain organelles surrounded by monolayer or bilayer membranes. Organelles take part in highly dynamic and organized interactions at membrane contact sites, which play vital roles during development and response to stress. The endoplasmic reticulum extends throughout the cell and acts as an architectural scaffold to maintain the spatial distribution of other membrane-bound organelles. In this review, we highlight the structural organization, dynamics, and physiological functions of membrane contact sites between the endoplasmic reticulum and various membrane-bound organelles, especially recent advances in plants. We briefly introduce how the combined use of dynamic and static imaging techniques can enable monitoring of the cross-talk between organelles via membrane contact sites. Finally, we discuss future directions for research fields related to membrane contact.
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Affiliation(s)
- Jiahui Bian
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
- Institute of Tree Development and Genome Editing, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
| | - Xiao Su
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
- Institute of Tree Development and Genome Editing, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
| | - Xiaoyan Yuan
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
- Institute of Tree Development and Genome Editing, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
| | - Yuan Zhang
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
- Institute of Tree Development and Genome Editing, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
| | - Jinxing Lin
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
- Institute of Tree Development and Genome Editing, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
- Institute of Botany, Chinese Academy of Sciences, Beijing 100083, China
| | - Xiaojuan Li
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
- Institute of Tree Development and Genome Editing, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China
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4
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Ito Y, Uemura T. Super resolution live imaging: The key for unveiling the true dynamics of membrane traffic around the Golgi apparatus in plant cells. FRONTIERS IN PLANT SCIENCE 2022; 13:1100757. [PMID: 36618665 PMCID: PMC9818705 DOI: 10.3389/fpls.2022.1100757] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Accepted: 12/12/2022] [Indexed: 06/17/2023]
Abstract
In contrast to the relatively static image of the plants, the world inside each cell is surprisingly dynamic. Membrane-bounded organelles move actively on the cytoskeletons and exchange materials by vesicles, tubules, or direct contact between each other. In order to understand what is happening during those events, it is essential to visualize the working components in vivo. After the breakthrough made by the application of fluorescent proteins, the development of light microscopy enabled many discoveries in cell biology, including those about the membrane traffic in plant cells. Especially, super-resolution microscopy, which is becoming more and more accessible, is now one of the most powerful techniques. However, although the spatial resolution has improved a lot, there are still some difficulties in terms of the temporal resolution, which is also a crucial parameter for the visualization of the living nature of the intracellular structures. In this review, we will introduce the super resolution microscopy developed especially for live-cell imaging with high temporal resolution, and show some examples that were made by this tool in plant membrane research.
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Affiliation(s)
- Yoko Ito
- Institute for Human Life Science, Ochanomizu University, Tokyo, Japan
| | - Tomohiro Uemura
- Graduate School of Humanities and Sciences, Ochanomizu University, Tokyo, Japan
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5
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Cao Q, Zhang W, Liu X, Li Y. AtFTCD-L, a trans-Golgi network localized protein, modulates root growth of Arabidopsis in high-concentration agar culture medium. PLANTA 2022; 256:3. [PMID: 35637390 DOI: 10.1007/s00425-022-03911-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Accepted: 05/07/2022] [Indexed: 06/15/2023]
Abstract
AtFTCD-L protein is localized on the TGN vesicles in Arabidopsis root cap cells. AtFTCD-L mutation resulted in slow root growth of Arabidopsis in high-concentration agar culture medium. Arabidopsis formiminotransferase cyclodeaminase-like protein (AtFTCD-L) in Arabidopsis is homologous to the formiminotransferase cyclodeaminase (FTCD) protein in animal cells. However, the localization and function of AtFTCD-L remain unknown in Arabidopsis. In this study, we generated and analyzed a deletion mutant of AtFTCD-L with a T-DNA insertion. We found that the growth of Arabidopsis roots with the T-DNA insertion mutation in AtFTCD-L was slower than that of wild-type roots when grown in high-concentration 1/2 MS agar culture medium. AtFTCD-L-GFP could restore the ftcd-l mutant phenotype. In addition, the AtFTCD-L protein was localized on the trans-Golgi network (TGN) vesicles in Arabidopsis root cap cells. Fluorescence recovery after photobleaching (FRAP) experiment using Arabidopsis pollen-specific receptor-like kinase-GFP (AtPRK1-GFP) stably transformed plants showed that the deficiency of AtFTCD-L protein in Arabidopsis led to slower secretion in the root cap peripheral cells. The AtFTCD-L protein deficiency also resulted in a significantly reduced monosaccharides content in the culture medium. Based on the above results, we speculate that the AtFTCD-L protein may be involved in sorting and/or transportation of TGN vesicles in root cap peripheral cells, thereby regulating the extracellular secretion of mucilage components in the root cap.
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Affiliation(s)
- Qijiang Cao
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
- College of Life Sciences and Engineering, Shenyang University, Liaoning, 110044, China
| | - Wei Zhang
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Xinyan Liu
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Yan Li
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
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6
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Nakano A. The Golgi Apparatus and its Next-Door Neighbors. Front Cell Dev Biol 2022; 10:884360. [PMID: 35573670 PMCID: PMC9096111 DOI: 10.3389/fcell.2022.884360] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2022] [Accepted: 03/28/2022] [Indexed: 12/20/2022] Open
Abstract
The Golgi apparatus represents a central compartment of membrane traffic. Its apparent architecture, however, differs considerably among species, from unstacked and scattered cisternae in the budding yeast Saccharomyces cerevisiae to beautiful ministacks in plants and further to gigantic ribbon structures typically seen in mammals. Considering the well-conserved functions of the Golgi, its fundamental structure must have been optimized despite seemingly different architectures. In addition to the core layers of cisternae, the Golgi is usually accompanied by next-door compartments on its cis and trans sides. The trans-Golgi network (TGN) can be now considered as a compartment independent from the Golgi stack. On the cis side, the intermediate compartment between the ER and the Golgi (ERGIC) has been known in mammalian cells, and its functional equivalent is now suggested for yeast and plant cells. High-resolution live imaging is extremely powerful for elucidating the dynamics of these compartments and has revealed amazing similarities in their behaviors, indicating common mechanisms conserved along the long course of evolution. From these new findings, I would like to propose reconsideration of compartments and suggest a new concept to describe their roles comprehensively around the Golgi and in the post-Golgi trafficking.
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7
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Del Giudice S, De Luca V, Parizadeh S, Russo D, Luini A, Di Martino R. Endogenous and Exogenous Regulatory Signaling in the Secretory Pathway: Role of Golgi Signaling Molecules in Cancer. Front Cell Dev Biol 2022; 10:833663. [PMID: 35399533 PMCID: PMC8984190 DOI: 10.3389/fcell.2022.833663] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2021] [Accepted: 03/03/2022] [Indexed: 11/29/2022] Open
Abstract
The biosynthetic transport route that constitutes the secretory pathway plays a fundamental role in the cell, providing to the synthesis and transport of around one third of human proteins and most lipids. Signaling molecules within autoregulatory circuits on the intracellular membranes of the secretory pathway regulate these processes, especially at the level of the Golgi complex. Indeed, cancer cells can hijack several of these signaling molecules, and therefore also the underlying regulated processes, to bolster their growth or gain more aggressive phenotypes. Here, we review the most important autoregulatory circuits acting on the Golgi, emphasizing the role of specific signaling molecules in cancer. In fact, we propose to draw awareness to highlight the Golgi-localized regulatory systems as potential targets in cancer therapy.
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Affiliation(s)
| | | | | | | | - Alberto Luini
- *Correspondence: Alberto Luini, ; Rosaria Di Martino,
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8
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Current Methods to Unravel the Functional Properties of Lysosomal Ion Channels and Transporters. Cells 2022; 11:cells11060921. [PMID: 35326372 PMCID: PMC8946281 DOI: 10.3390/cells11060921] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2022] [Revised: 03/04/2022] [Accepted: 03/05/2022] [Indexed: 02/07/2023] Open
Abstract
A distinct set of channels and transporters regulates the ion fluxes across the lysosomal membrane. Malfunctioning of these transport proteins and the resulting ionic imbalance is involved in various human diseases, such as lysosomal storage disorders, cancer, as well as metabolic and neurodegenerative diseases. As a consequence, these proteins have stimulated strong interest for their suitability as possible drug targets. A detailed functional characterization of many lysosomal channels and transporters is lacking, mainly due to technical difficulties in applying the standard patch-clamp technique to these small intracellular compartments. In this review, we focus on current methods used to unravel the functional properties of lysosomal ion channels and transporters, stressing their advantages and disadvantages and evaluating their fields of applicability.
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9
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Jung Y, Artan M, Kim N, Yeom J, Hwang AB, Jeong DE, Altintas Ö, Seo K, Seo M, Lee D, Hwang W, Lee Y, Sohn J, Kim EJE, Ju S, Han SK, Nam HJ, Adams L, Ryu Y, Moon DJ, Kang C, Yoo JY, Park SK, Ha CM, Hansen M, Kim S, Lee C, Park SY, Lee SJV. MON-2, a Golgi protein, mediates autophagy-dependent longevity in Caenorhabditis elegans. SCIENCE ADVANCES 2021; 7:eabj8156. [PMID: 34860542 PMCID: PMC8641931 DOI: 10.1126/sciadv.abj8156] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 10/14/2021] [Indexed: 06/02/2023]
Abstract
The Golgi apparatus plays a central role in trafficking cargoes such as proteins and lipids. Defects in the Golgi apparatus lead to various diseases, but its role in organismal longevity is largely unknown. Using a quantitative proteomic approach, we found that a Golgi protein, MON-2, was up-regulated in long-lived Caenorhabditis elegans mutants with mitochondrial respiration defects and was required for their longevity. Similarly, we showed that DOP1/PAD-1, which acts with MON-2 to traffic macromolecules between the Golgi and endosome, contributed to the longevity of respiration mutants. Furthermore, we demonstrated that MON-2 was required for up-regulation of autophagy, a longevity-associated recycling process, by activating the Atg8 ortholog GABARAP/LGG-1 in C. elegans. Consistently, we showed that mammalian MON2 activated GABARAPL2 through physical interaction, which increased autophagic flux in mammalian cells. Thus, the evolutionarily conserved role of MON2 in trafficking between the Golgi and endosome is an integral part of autophagy-mediated longevity.
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Affiliation(s)
- Yoonji Jung
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, South Korea
| | - Murat Artan
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Nari Kim
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Jeonghun Yeom
- Center for Theragnosis, Korea Institute of Science and Technology, Seoul 02792, South Korea
| | - Ara B. Hwang
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Dae-Eun Jeong
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Özlem Altintas
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Keunhee Seo
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Mihwa Seo
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Dongyeop Lee
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Wooseon Hwang
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Yujin Lee
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, South Korea
| | - Jooyeon Sohn
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, South Korea
| | - Eun Ji E. Kim
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, South Korea
| | - Sungeun Ju
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Seong Kyu Han
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Hyun-Jun Nam
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Linnea Adams
- Development, Aging, and Regeneration Program, Sanford Burnham Prebys Medical Discovery Institute, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA
| | - Youngjae Ryu
- Research Division and Brain Research Core Facilities of Korea Brain Research Institute, Daegu 41068, South Korea
| | - Dong Jin Moon
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Chanhee Kang
- School of Biological Sciences, College of Natural Sciences, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, South Korea
| | - Joo-Yeon Yoo
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Sang Ki Park
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Chang Man Ha
- Research Division and Brain Research Core Facilities of Korea Brain Research Institute, Daegu 41068, South Korea
| | - Malene Hansen
- Development, Aging, and Regeneration Program, Sanford Burnham Prebys Medical Discovery Institute, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA
| | - Sanguk Kim
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Cheolju Lee
- Center for Theragnosis, Korea Institute of Science and Technology, Seoul 02792, South Korea
| | - Seung-Yeol Park
- Department of Life Sciences, Pohang University of Science and Technology, 77 Cheongam-ro, Nam-gu, Pohang, Gyeongbuk 37673, South Korea
| | - Seung-Jae V. Lee
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, South Korea
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10
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Pothukuchi P, Agliarulo I, Pirozzi M, Rizzo R, Russo D, Turacchio G, Nüchel J, Yang JS, Gehin C, Capolupo L, Hernandez-Corbacho MJ, Biswas A, Vanacore G, Dathan N, Nitta T, Henklein P, Thattai M, Inokuchi JI, Hsu VW, Plomann M, Obeid LM, Hannun YA, Luini A, D'Angelo G, Parashuraman S. GRASP55 regulates intra-Golgi localization of glycosylation enzymes to control glycosphingolipid biosynthesis. EMBO J 2021; 40:e107766. [PMID: 34516001 PMCID: PMC8521277 DOI: 10.15252/embj.2021107766] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2021] [Revised: 07/26/2021] [Accepted: 08/06/2021] [Indexed: 12/24/2022] Open
Abstract
The Golgi apparatus, the main glycosylation station of the cell, consists of a stack of discontinuous cisternae. Glycosylation enzymes are usually concentrated in one or two specific cisternae along the cis‐trans axis of the organelle. How such compartmentalized localization of enzymes is achieved and how it contributes to glycosylation are not clear. Here, we show that the Golgi matrix protein GRASP55 directs the compartmentalized localization of key enzymes involved in glycosphingolipid (GSL) biosynthesis. GRASP55 binds to these enzymes and prevents their entry into COPI‐based retrograde transport vesicles, thus concentrating them in the trans‐Golgi. In genome‐edited cells lacking GRASP55, or in cells expressing mutant enzymes without GRASP55 binding sites, these enzymes relocate to the cis‐Golgi, which affects glycosphingolipid biosynthesis by changing flux across metabolic branch points. These findings reveal a mechanism by which a matrix protein regulates polarized localization of glycosylation enzymes in the Golgi and controls competition in glycan biosynthesis.
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Affiliation(s)
- Prathyush Pothukuchi
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy
| | - Ilenia Agliarulo
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy
| | - Marinella Pirozzi
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy
| | - Riccardo Rizzo
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy
| | - Domenico Russo
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy
| | - Gabriele Turacchio
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy
| | - Julian Nüchel
- Medical Faculty, Center for Biochemistry, University of Cologne, Cologne, Germany
| | - Jia-Shu Yang
- Division of Rheumatology, Inflammation and Immunity, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA
| | - Charlotte Gehin
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Laura Capolupo
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | | | - Ansuman Biswas
- National Center of Biological Sciences, Bengaluru, India
| | - Giovanna Vanacore
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy
| | - Nina Dathan
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy
| | - Takahiro Nitta
- Division of Glycopathology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Japan
| | - Petra Henklein
- Universitätsmedizin Berlin Institut für Biochemie Charité CrossOver Charitéplatz 1 / Sitz, Berlin, Germany
| | - Mukund Thattai
- National Center of Biological Sciences, Bengaluru, India
| | - Jin-Ichi Inokuchi
- Division of Glycopathology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Japan
| | - Victor W Hsu
- Division of Rheumatology, Inflammation and Immunity, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA
| | - Markus Plomann
- Medical Faculty, Center for Biochemistry, University of Cologne, Cologne, Germany
| | - Lina M Obeid
- Stony Brook University Medical Center, Stony Brook, NY, USA
| | - Yusuf A Hannun
- Stony Brook University Medical Center, Stony Brook, NY, USA
| | - Alberto Luini
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy
| | - Giovanni D'Angelo
- Institute of Biochemistry and Cell Biology, National Research Council of Italy, Rome, Italy.,École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
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11
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Zhan L, Li J, Jew B, Sul JH. Rare variants in the endocytic pathway are associated with Alzheimer's disease, its related phenotypes, and functional consequences. PLoS Genet 2021; 17:e1009772. [PMID: 34516545 PMCID: PMC8460036 DOI: 10.1371/journal.pgen.1009772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Revised: 09/23/2021] [Accepted: 08/10/2021] [Indexed: 11/19/2022] Open
Abstract
Late-onset Alzheimer's disease (LOAD) is the most common type of dementia causing irreversible brain damage to the elderly and presents a major public health challenge. Clinical research and genome-wide association studies have suggested a potential contribution of the endocytic pathway to AD, with an emphasis on common loci. However, the contribution of rare variants in this pathway to AD has not been thoroughly investigated. In this study, we focused on the effect of rare variants on AD by first applying a rare-variant gene-set burden analysis using genes in the endocytic pathway on over 3,000 individuals with European ancestry from three large whole-genome sequencing (WGS) studies. We identified significant associations of rare-variant burden within the endocytic pathway with AD, which were successfully replicated in independent datasets. We further demonstrated that this endocytic rare-variant enrichment is associated with neurofibrillary tangles (NFTs) and age-related phenotypes, increasing the risk of obtaining severer brain damage, earlier age-at-onset, and earlier age-of-death. Next, by aggregating rare variants within each gene, we sought to identify single endocytic genes associated with AD and NFTs. Careful examination using NFTs revealed one significantly associated gene, ANKRD13D. To identify functional associations, we integrated bulk RNA-Seq data from over 600 brain tissues and found two endocytic expression genes (eGenes), HLA-A and SLC26A7, that displayed significant influences on their gene expressions. Differential expressions between AD patients and controls of these three identified genes were further examined by incorporating scRNA-Seq data from 48 post-mortem brain samples and demonstrated distinct expression patterns across cell types. Taken together, our results demonstrated strong rare-variant effect in the endocytic pathway on AD risk and progression and functional effect of gene expression alteration in both bulk and single-cell resolution, which may bring more insight and serve as valuable resources for future AD genetic studies, clinical research, and therapeutic targeting.
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Affiliation(s)
- Lingyu Zhan
- Molecular Biology Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California, United States of America
| | - Jiajin Li
- Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California, United States of America
| | - Brandon Jew
- Interdepartmental Program in Bioinformatics, University of California, Los Angeles, Los Angeles, California, United States of America
| | - Jae Hoon Sul
- Department of Psychiatry and Biobehavioral Sciences, University of California, Los Angeles, Los Angeles, California, United States of America
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12
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Newer Methods Drive Recent Insights into Rab GTPase Biology: An Overview. Methods Mol Biol 2021. [PMID: 34453706 DOI: 10.1007/978-1-0716-1346-7_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/18/2023]
Abstract
The conserved Ypt/Rab GTPases regulate all major intracellular protein traffic pathways, including secretion, endocytosis and autophagy. These GTPases undergo distinct changes in conformation between their GTP- and GDP-bound forms and cycle between the cytoplasm and membranes with the aid of their upstream regulators. When activated on the membrane in the GTP-bound form, they recruit their downstream effectors, which include components of vesicular transport. Progress in the past 5 years regarding mechanisms of Rab action, functions, and the effects of disruption of these functions on the well-being of cells and organisms has been propelled by advances in methodologies in molecular and cellular biology. Here, we highlight methods used recently to analyze regulation, localization, interactions, and function of Rab GTPases and their roles in human disease. We discuss contributions of these methods to new insights into Rabs, as well as their future use in addressing open questions in the field of Rab biology.
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13
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Lujan P, Campelo F. Should I stay or should I go? Golgi membrane spatial organization for protein sorting and retention. Arch Biochem Biophys 2021; 707:108921. [PMID: 34038703 DOI: 10.1016/j.abb.2021.108921] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 04/12/2021] [Accepted: 05/03/2021] [Indexed: 12/23/2022]
Abstract
The Golgi complex is the membrane-bound organelle that lies at the center of the secretory pathway. Its main functions are to maintain cellular lipid homeostasis, to orchestrate protein processing and maturation, and to mediate protein sorting and export. These functions are not independent of one another, and they all require that the membranes of the Golgi complex have a well-defined biochemical composition. Importantly, a finely-regulated spatiotemporal organization of the Golgi membrane components is essential for the correct performance of the organelle. In here, we review our current mechanistic and molecular understanding of how Golgi membranes are spatially organized in the lateral and axial directions to fulfill their functions. In particular, we highlight the current evidence and proposed models of intra-Golgi transport, as well as the known mechanisms for the retention of Golgi residents and for the sorting and export of transmembrane cargo proteins. Despite the controversies, conflicting evidence, clashes between models, and technical limitations, the field has moved forward and we have gained extensive knowledge in this fascinating topic. However, there are still many important questions that remain to be completely answered. We hope that this review will help boost future investigations on these issues.
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Affiliation(s)
- Pablo Lujan
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, 08860, Barcelona, Spain.
| | - Felix Campelo
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, 08860, Barcelona, Spain.
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14
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Rizzo R, Russo D, Kurokawa K, Sahu P, Lombardi B, Supino D, Zhukovsky MA, Vocat A, Pothukuchi P, Kunnathully V, Capolupo L, Boncompain G, Vitagliano C, Zito Marino F, Aquino G, Montariello D, Henklein P, Mandrich L, Botti G, Clausen H, Mandel U, Yamaji T, Hanada K, Budillon A, Perez F, Parashuraman S, Hannun YA, Nakano A, Corda D, D'Angelo G, Luini A. Golgi maturation-dependent glycoenzyme recycling controls glycosphingolipid biosynthesis and cell growth via GOLPH3. EMBO J 2021; 40:e107238. [PMID: 33749896 DOI: 10.15252/embj.2020107238] [Citation(s) in RCA: 43] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Revised: 01/24/2021] [Accepted: 02/10/2021] [Indexed: 01/08/2023] Open
Abstract
Glycosphingolipids are important components of the plasma membrane where they modulate the activities of membrane proteins including signalling receptors. Glycosphingolipid synthesis relies on competing reactions catalysed by Golgi-resident enzymes during the passage of substrates through the Golgi cisternae. The glycosphingolipid metabolic output is determined by the position and levels of the enzymes within the Golgi stack, but the mechanisms that coordinate the intra-Golgi localisation of the enzymes are poorly understood. Here, we show that a group of sequentially-acting enzymes operating at the branchpoint among glycosphingolipid synthetic pathways binds the Golgi-localised oncoprotein GOLPH3. GOLPH3 sorts these enzymes into vesicles for intra-Golgi retro-transport, acting as a component of the cisternal maturation mechanism. Through these effects, GOLPH3 controls the sub-Golgi localisation and the lysosomal degradation rate of specific enzymes. Increased GOLPH3 levels, as those observed in tumours, alter glycosphingolipid synthesis and plasma membrane composition thereby promoting mitogenic signalling and cell proliferation. These data have medical implications as they outline a novel oncogenic mechanism of action for GOLPH3 based on glycosphingolipid metabolism.
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Affiliation(s)
- Riccardo Rizzo
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy.,Institute of Nanotechnology, National Research Council (CNR-NANOTEC), Lecce, Italy
| | - Domenico Russo
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Kazuo Kurokawa
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Saitama, Japan
| | - Pranoy Sahu
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Bernadette Lombardi
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Domenico Supino
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Mikhail A Zhukovsky
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Anthony Vocat
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Prathyush Pothukuchi
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Vidya Kunnathully
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Laura Capolupo
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | | | - Carlo Vitagliano
- Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy
| | | | - Gabriella Aquino
- Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy
| | - Daniela Montariello
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Petra Henklein
- Humboldt-Universität zu Berlin, and Berlin Institute of Health, Institute of Biochemistry, Charité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Berlin, Germany
| | - Luigi Mandrich
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Gerardo Botti
- Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy
| | - Henrik Clausen
- Faculty of Health Sciences, Centre for Glycomics, Department of Cellular and Molecular Medicine Nørre Alle 20, University of Copenhagen, Copenhagen N, Denmark
| | - Ulla Mandel
- Faculty of Health Sciences, Centre for Glycomics, Department of Cellular and Molecular Medicine Nørre Alle 20, University of Copenhagen, Copenhagen N, Denmark
| | - Toshiyuki Yamaji
- Department of Biochemistry & Cell Biology, National Institute of Infectious Diseases, Tokyo, Japan
| | - Kentaro Hanada
- Department of Biochemistry & Cell Biology, National Institute of Infectious Diseases, Tokyo, Japan
| | - Alfredo Budillon
- Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy
| | - Franck Perez
- Institute Curie - CNRS UMR1 44, Research Center, Paris, France
| | | | - Yusuf A Hannun
- Stony Brook University Medical Center, New York, NY, USA
| | - Akihiko Nakano
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Saitama, Japan
| | - Daniela Corda
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
| | - Giovanni D'Angelo
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy.,École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Alberto Luini
- Institute of Biochemistry and Cell Biology, National Research Council, Naples, Italy
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15
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Lujan P, Angulo-Capel J, Chabanon M, Campelo F. Interorganelle communication and membrane shaping in the early secretory pathway. Curr Opin Cell Biol 2021; 71:95-102. [PMID: 33711785 DOI: 10.1016/j.ceb.2021.01.010] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Revised: 01/25/2021] [Accepted: 01/30/2021] [Indexed: 01/02/2023]
Abstract
Biomolecules in the secretory pathway use membrane trafficking for reaching their final intracellular destination or for secretion outside the cell. This highly dynamic and multipartite process involves different organelles that communicate to one another while maintaining their identity, shape, and function. Recent studies unraveled new mechanisms of interorganelle communication that help organize the early secretory pathway. We highlight how the spatial proximity between endoplasmic reticulum (ER) exit sites and early Golgi elements provides novel means of ER-Golgi communication for ER export. We also review recent findings on how membrane contact sites between the ER and the trans-Golgi membranes can sustain anterograde traffic out of the Golgi complex.
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Affiliation(s)
- Pablo Lujan
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, 08860 Barcelona, Spain
| | - Jessica Angulo-Capel
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, 08860 Barcelona, Spain
| | - Morgan Chabanon
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, 08860 Barcelona, Spain; Universitat Politècnica de Catalunya-BarcelonaTech, E-08034, Barcelona, Spain
| | - Felix Campelo
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, 08860 Barcelona, Spain.
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16
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De Loof A, Schoofs L. Two Undervalued Functions of the Golgi Apparatus: Removal of Excess Ca 2+ and Biosynthesis of Farnesol-Like Sesquiterpenoids, Possibly as Ca 2+-Pump Agonists and Membrane "Fluidizers-Plasticizers". Front Physiol 2020; 11:542879. [PMID: 33178030 PMCID: PMC7593688 DOI: 10.3389/fphys.2020.542879] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2020] [Accepted: 09/16/2020] [Indexed: 12/16/2022] Open
Abstract
The extensive literature dealing with the Golgi system emphasizes its role in protein secretion and modification, usually without specifying from which evolutionary ancient cell physiological necessity such secretion originated. Neither does it specify which functional requirements the secreted proteins must meet. From a reinterpretation of some classical and recent data gained mainly, but not exclusively, from (insect) endocrinology, the view emerged that the likely primordial function of the rough endoplasmic reticulum (RER)–Golgi complex in all eukaryotes was not the secretion of any type of protein but the removal of toxic excess Ca2+ from the cytoplasm. Such activity requires the concurrent secretion of large amounts of Ca2+-carrying/transporting proteins acting as a micro-conveyor belt system inside the RER–Golgi. Thus, (fitness increasing) protein secretion is subordinate to Ca2+ removal. Milk with its high content of protein and Ca2+ (60–90 mM vs. 100 nM in unstimulated mammary gland cells) is an extreme example. The sarco(endo)plasmatic reticulum Ca2+-ATPases (SERCAs) and SPCA1a Ca2+/Mn2+ transport ATPases are major players in Ca2+ removal through the Golgi. Both are blocked by the sesquiterpenoid thapsigargin. This strengthens the hypothesis (2014) that endogenous farnesol-like sesquiterpenoids (FLSs) may act as the long sought for but still unidentified agonist(s) for Ca2+-pumps in both the ER and Golgi. A second putative function also emerges. The fusion of both the incoming and outgoing transport vesicles, respectively, at the cis- and trans- side of Golgi stacks, with the membrane system requiring high flexibility and fast self-closing of the involved membranes. These properties may—possibly partially—be controlled by endogenous hydrophobic membrane “fluidizers” for which FLSs are prime candidates. A recent reexamination of unexplained classical data suggests that they are likely synthesized by the Golgi itself. This game-changing hypothesis is endorsed by several arguments and data, some of which date from 1964, that the insect corpus allatum (CA), which is the major production site of farnesol-esters, has active Golgi systems. Thus, in addition to secreting FLS, in particular juvenile hormone(s), it also secretes a protein(s) or peptide(s) with thus far unknown function. This paper suggests answers to various open questions in cell physiology and general endocrinology.
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Affiliation(s)
- Arnold De Loof
- Research Group of Functional Genomics and Proteomics, Department of Biology, KU Leuven, Leuven, Belgium
| | - Liliane Schoofs
- Research Group of Functional Genomics and Proteomics, Department of Biology, KU Leuven, Leuven, Belgium
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17
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Kurokawa K, Nakano A. Live-cell Imaging by Super-resolution Confocal Live Imaging Microscopy (SCLIM): Simultaneous Three-color and Four-dimensional Live Cell Imaging with High Space and Time Resolution. Bio Protoc 2020; 10:e3732. [PMID: 33659393 DOI: 10.21769/bioprotoc.3732] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Revised: 06/17/2020] [Accepted: 07/14/2020] [Indexed: 12/11/2022] Open
Abstract
Many questions in cell biology can be solved by state-of-the-art technology of live cell imaging. One good example is the mechanism of membrane traffic, in which small membrane carriers are rapidly moving around in the cytoplasm to deliver cargo proteins between organelles. For directly visualizing the events in membrane trafficking system, researchers have long awaited the technology that enables simultaneous multi-color and four-dimensional observation at high space and time resolution. Super-resolution microscopy methods, for example STED, PALM/STORM, and SIM, provide greater spatial resolution, however, these methods are not enough in temporal resolution. The super-resolution confocal live imaging microscopy (SCLIM) that we developed has now achieved the performance required. By using SCLIM, we have conducted high spatiotemporal visualization of secretory cargo together with early and late Golgi resident proteins tagged with three different fluorescence proteins. We have demonstrated that secretory cargo is indeed delivered within the Golgi by cisternal maturation. In addition, we have visualized details of secretory cargo trafficking in the Golgi, including formation of zones within a maturing cisterna, in which Golgi resident proteins are segregated, and movement of cargo between these zones. This protocol can be used for simultaneous three-color and four-dimensional observation of various phenomena in living cells, from yeast to higher plants and animals, at high spatiotemporal resolution.
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Affiliation(s)
- Kazuo Kurokawa
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Akihiko Nakano
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
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18
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De Tito S, Hervás JH, van Vliet AR, Tooze SA. The Golgi as an Assembly Line to the Autophagosome. Trends Biochem Sci 2020; 45:484-496. [PMID: 32307224 DOI: 10.1016/j.tibs.2020.03.010] [Citation(s) in RCA: 59] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2019] [Revised: 03/05/2020] [Accepted: 03/17/2020] [Indexed: 12/11/2022]
Abstract
Autophagy is traditionally depicted as a signaling cascade that culminates in the formation of an autophagosome that degrades cellular cargo. However, recent studies have identified myriad pathways and cellular organelles underlying the autophagy process, be it as signaling platforms or through the contribution of proteins and lipids. The Golgi complex is recognized as being a central transport hub in the cell, with a critical role in endocytic trafficking and endoplasmic reticulum (ER) to plasma membrane (PM) transport. However, the Golgi is also an important site of key autophagy regulators, including the protein autophagy-related (ATG)-9A and the lipid, phosphatidylinositol-4-phosphate [PI(4)P]. In this review, we highlight the central function of this organelle in autophagy as a transport hub supplying various components of autophagosome formation.
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Affiliation(s)
- Stefano De Tito
- The Molecular Cell Biology of Autophagy, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK
| | - Javier H Hervás
- The Molecular Cell Biology of Autophagy, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK; Instituto Biofisika (CSIC, UPV/EHU), Departamento de Bioquímica y Biología Molecular, Universidad del País Vasco, Bilbao, Spain
| | - Alexander R van Vliet
- The Molecular Cell Biology of Autophagy, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK
| | - Sharon A Tooze
- The Molecular Cell Biology of Autophagy, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
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19
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Luo PM, Boyce M. Directing Traffic: Regulation of COPI Transport by Post-translational Modifications. Front Cell Dev Biol 2019; 7:190. [PMID: 31572722 PMCID: PMC6749011 DOI: 10.3389/fcell.2019.00190] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Accepted: 08/23/2019] [Indexed: 12/12/2022] Open
Abstract
The coat protein complex I (COPI) is an essential, highly conserved pathway that traffics proteins and lipids between the endoplasmic reticulum (ER) and the Golgi. Many aspects of the COPI machinery are well understood at the structural, biochemical and genetic levels. However, we know much less about how cells dynamically modulate COPI trafficking in response to changing signals, metabolic state, stress or other stimuli. Recently, post-translational modifications (PTMs) have emerged as one common theme in the regulation of the COPI pathway. Here, we review a range of modifications and mechanisms that govern COPI activity in interphase cells and suggest potential future directions to address as-yet unanswered questions.
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Affiliation(s)
- Peter M Luo
- Department of Biochemistry, Duke University School of Medicine, Durham, NC, United States
| | - Michael Boyce
- Department of Biochemistry, Duke University School of Medicine, Durham, NC, United States
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20
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Tojima T, Suda Y, Ishii M, Kurokawa K, Nakano A. Spatiotemporal dissection of the trans-Golgi network in budding yeast. J Cell Sci 2019; 132:jcs.231159. [PMID: 31289195 PMCID: PMC6703704 DOI: 10.1242/jcs.231159] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2019] [Accepted: 07/01/2019] [Indexed: 12/27/2022] Open
Abstract
The trans-Golgi network (TGN) acts as a sorting hub for membrane traffic. It receives newly synthesized and recycled proteins, and sorts and delivers them to specific targets such as the plasma membrane, endosomes and lysosomes/vacuoles. Accumulating evidence suggests that the TGN is generated from the trans-most cisterna of the Golgi by maturation, but the detailed transition processes remain obscure. Here, we examine spatiotemporal assembly dynamics of various Golgi/TGN-resident proteins in budding yeast by high-speed and high-resolution spinning-disk confocal microscopy. The Golgi–TGN transition gradually proceeds via at least three successive stages: the ‘Golgi stage’ where glycosylation occurs; the ‘early TGN stage’, which receives retrograde traffic; and the ‘late TGN stage’, where transport carriers are produced. During the stage transition periods, earlier and later markers are often compartmentalized within a cisterna. Furthermore, for the late TGN stage, various types of coat/adaptor proteins exhibit distinct assembly patterns. Taken together, our findings characterize the identity of the TGN as a membrane compartment that is structurally and functionally distinguishable from the Golgi. This article has an associated First Person interview with the first author of the paper. Highlighted Article: The TGN displays two sub-stages of maturation: ‘early TGN’, when retrograde traffic is received, and ‘late TGN’, when transport carriers are produced. At the late TGN, various coat/adaptor proteins exhibit distinct assembly dynamics.
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Affiliation(s)
- Takuro Tojima
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Wako, Saitama 351-0198, Japan
| | - Yasuyuki Suda
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Wako, Saitama 351-0198, Japan.,Laboratory of Molecular Cell Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Ibaraki 305-8575, Japan
| | - Midori Ishii
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Wako, Saitama 351-0198, Japan
| | - Kazuo Kurokawa
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Wako, Saitama 351-0198, Japan
| | - Akihiko Nakano
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Wako, Saitama 351-0198, Japan
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21
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Caracci MO, Fuentealba LM, Marzolo MP. Golgi Complex Dynamics and Its Implication in Prevalent Neurological Disorders. Front Cell Dev Biol 2019; 7:75. [PMID: 31134199 PMCID: PMC6514153 DOI: 10.3389/fcell.2019.00075] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2019] [Accepted: 04/18/2019] [Indexed: 12/13/2022] Open
Abstract
Coupling of protein synthesis with protein delivery to distinct subcellular domains is essential for maintaining cellular homeostasis, and defects thereof have consistently been shown to be associated with several diseases. This function is particularly challenging for neurons given their polarized nature and differential protein requirements in synaptic boutons, dendrites, axons, and soma. Long-range trafficking is greatly enhanced in neurons by discrete mini-organelles resembling the Golgi complex (GC) referred to as Golgi outposts (GOPs) which play an essential role in the development of dendritic arborization. In this context, the morphology of the GC is highly plastic, and the polarized distribution of this organelle is necessary for neuronal migration and polarized growth. Furthermore, synaptic components are readily trafficked and modified at GOP suggesting a function for this organelle in synaptic plasticity. However, little is known about GOPs properties and biogenesis and the role of GOP dysregulation in pathology. In this review, we discuss current literature supporting a role for GC dynamics in prevalent neurological disorders such as Alzheimer’s disease, Parkinson’s disease, Huntington’s disease, and epilepsy, and examine the association of these disorders with the wide-ranging effects of GC function on common cellular pathways regulating neuronal excitability, polarity, migration, and organellar stress. First, we discuss the role of Golgins and Golgi-associated proteins in the regulation of GC morphology and dynamics. Then, we consider abnormal GC arrangements observed in neurological disorders and associations with common neuronal defects therein. Finally, we consider the cell signaling pathways involved in the modulation of GC dynamics and argue for a master regulatory role for Reelin signaling, a well-known regulator of neuronal polarity and migration. Determining the cellular pathways involved in shaping the Golgi network will have a direct and profound impact on our current understanding of neurodevelopment and neuropathology and aid the development of novel therapeutic strategies for improved patient care and prognosis.
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Affiliation(s)
- Mario O Caracci
- Departamento de Biología Celular y Molecular, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Luz M Fuentealba
- Departamento de Biología Celular y Molecular, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - María-Paz Marzolo
- Departamento de Biología Celular y Molecular, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
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22
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Kurokawa K, Osakada H, Kojidani T, Waga M, Suda Y, Asakawa H, Haraguchi T, Nakano A. Visualization of secretory cargo transport within the Golgi apparatus. J Cell Biol 2019; 218:1602-1618. [PMID: 30858192 PMCID: PMC6504898 DOI: 10.1083/jcb.201807194] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Revised: 12/31/2018] [Accepted: 02/04/2019] [Indexed: 01/09/2023] Open
Abstract
Kurokawa et al. visualize the transport of secretory cargo in the Golgi apparatus in living yeast cells. Cargo stays in the cisterna, whose property changes from cis to trans and further to the trans-Golgi network, but shows a dynamic behavior between the early and the late zones within the maturing cisterna. To describe trafficking of secretory cargo within the Golgi apparatus, the cisternal maturation model predicts that Golgi cisternae change their properties from cis to trans while cargo remains in the cisternae. Cisternal change has been demonstrated in living yeast Saccharomyces cerevisiae; however, the behavior of cargo has yet to be examined directly. In this study, we conducted simultaneous three-color and four-dimensional visualization of secretory transmembrane cargo together with early and late Golgi resident proteins. We show that cargo stays in a Golgi cisterna during maturation from cis-Golgi to trans-Golgi and further to the trans-Golgi network (TGN), which involves dynamic mixing and segregation of two zones of the earlier and later Golgi resident proteins. The location of cargo changes from the early to the late zone within the cisterna during the progression of maturation. In addition, cargo shows an interesting behavior during the maturation to the TGN. After most cargo has reached the TGN zone, a small amount of cargo frequently reappears in the earlier zone.
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Affiliation(s)
- Kazuo Kurokawa
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Saitama, Japan
| | - Hiroko Osakada
- Advanced ICT Research Institute Kobe, National Institute of Information and Communications Technology, Kobe, Japan
| | - Tomoko Kojidani
- Advanced ICT Research Institute Kobe, National Institute of Information and Communications Technology, Kobe, Japan.,Department of Chemical and Biological Sciences, Faculty of Science, Japan Women's University, Tokyo, Japan
| | - Miho Waga
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Saitama, Japan
| | - Yasuyuki Suda
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Saitama, Japan.,Laboratory of Molecular Cell Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Japan
| | - Haruhiko Asakawa
- Graduate School of Frontier Biosciences, Osaka University, Suita, Japan
| | - Tokuko Haraguchi
- Advanced ICT Research Institute Kobe, National Institute of Information and Communications Technology, Kobe, Japan.,Graduate School of Frontier Biosciences, Osaka University, Suita, Japan
| | - Akihiko Nakano
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Saitama, Japan
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23
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Golgi-localized LOT regulates trans-Golgi network biogenesis and pollen tube growth. Proc Natl Acad Sci U S A 2018; 115:12307-12312. [PMID: 30413616 DOI: 10.1073/pnas.1809206115] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
The trans-Golgi network (TGN) is an essential tubular-vesicular organelle derived from the Golgi and functions as an independent sorting and trafficking hub within the cell. However, the molecular regulation of TGN biogenesis remains enigmatic. Here we identified an Arabidopsis mutant loss of TGN (lot) that is defective in TGN formation and sterile due to impaired pollen tube growth in the style. The mutation leads to overstacking of the Golgi cisternae and significant reduction in the number of TGNs and vesicles surrounding the Golgi in pollen, which is corroborated by the dispersed cytosolic distribution of TGN-localized proteins. Consistently, deposition of extracellular pectin and plasma membrane localization of kinases and phosphoinositide species are also impaired. Subcellular localization analysis suggests that LOT is localized on the periphery of the Golgi cisternae, but the mutation does not affect the localization of Golgi-resident proteins. Furthermore, the yeast complementation result suggests that LOT could functionally act as a component of the guanine nucleotide exchange factor (GEF) complex of small Rab GTPase Ypt6. Taken together, these findings suggest that LOT is a critical player for TGN biogenesis in the plant lineage.
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24
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Saraste J, Marie M. Intermediate compartment (IC): from pre-Golgi vacuoles to a semi-autonomous membrane system. Histochem Cell Biol 2018; 150:407-430. [PMID: 30173361 PMCID: PMC6182704 DOI: 10.1007/s00418-018-1717-2] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/27/2018] [Indexed: 12/19/2022]
Abstract
Despite its discovery more than three decades ago and well-established role in protein sorting and trafficking in the early secretory pathway, the intermediate compartment (IC) has remained enigmatic. The prevailing view is that the IC evolved as a specialized organelle to mediate long-distance endoplasmic reticulum (ER)–Golgi communication in metazoan cells, but is lacking in other eukaryotes, such as plants and fungi. However, this distinction is difficult to reconcile with the high conservation of the core machineries that regulate early secretory trafficking from yeast to man. Also, it has remained unclear whether the pleiomorphic IC components—vacuoles, tubules and vesicles—represent transient transport carriers or building blocks of a permanent pre-Golgi organelle. Interestingly, recent studies have revealed that the IC maintains its compositional, structural and spatial properties throughout the cell cycle, supporting a model that combines the dynamic and stable aspects of the organelle. Moreover, the IC has been assigned novel functions, such as cell signaling, Golgi-independent trafficking and autophagy. The emerging permanent nature of the IC and its connections with the centrosome and the endocytic recycling system encourage reconsideration of its relationship with the Golgi ribbon, role in Golgi biogenesis and ubiquitous presence in eukaryotic cells.
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Affiliation(s)
- Jaakko Saraste
- Department of Biomedicine and Molecular Imaging Center (MIC), University of Bergen, Jonas Lies vei 91, 5009, Bergen, Norway.
| | - Michaël Marie
- Department of Biomedicine and Molecular Imaging Center (MIC), University of Bergen, Jonas Lies vei 91, 5009, Bergen, Norway
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25
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Ishii M, Lupashin VV, Nakano A. Detailed Analysis of the Interaction of Yeast COG Complex. Cell Struct Funct 2018; 43:119-127. [PMID: 29899178 DOI: 10.1247/csf.18014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
The Golgi apparatus is a central station for protein trafficking in eukaryotic cells. A widely accepted model of protein transport within the Golgi apparatus is cisternal maturation. Each cisterna has specific resident proteins, which are thought to be maintained by COPI-mediated transport. However, the mechanisms underlying specific sorting of these Golgi-resident proteins remain elusive. To obtain a clue to understand the selective sorting of vesicles between the Golgi cisterenae, we investigated the molecular arrangements of the conserved oligomeric Golgi (COG) subunits in yeast cells. Mutations in COG subunits cause defects in Golgi trafficking and glycosylation of proteins and are causative of Congenital Disorders of Glycosylation (CDG) in humans. Interactions among COG subunits in cytosolic and membrane fractions were investigated by co-immunoprecipitation. Cytosolic COG subunits existed as octamers, whereas membrane-associated COG subunits formed a variety of subcomplexes. Relocation of individual COG subunits to mitochondria resulted in recruitment of only a limited number of other COG subunits to mitochondria. These results indicate that COG proteins function in the forms of a variety of subcomplexes and suggest that the COG complex does not comprise stable tethering without other interactors.Key words: The Golgi apparatus, COG complex, yeast, membrane trafficking, multi-subunit tethering complex.
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Affiliation(s)
- Midori Ishii
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics.,Department of Biological Sciences, Graduate School of Science, The University of Tokyo
| | - Vladimir V Lupashin
- Department of Physiology and Biophysics, University of Arkansas for Medical Sciences
| | - Akihiko Nakano
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics.,Department of Biological Sciences, Graduate School of Science, The University of Tokyo
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26
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Boncompain G, Weigel AV. Transport and sorting in the Golgi complex: multiple mechanisms sort diverse cargo. Curr Opin Cell Biol 2018; 50:94-101. [DOI: 10.1016/j.ceb.2018.03.002] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2018] [Revised: 02/28/2018] [Accepted: 03/05/2018] [Indexed: 01/22/2023]
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27
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Ito Y, Uemura T, Nakano A. The Golgi entry core compartment functions as a COPII-independent scaffold for ER-to-Golgi transport in plant cells. J Cell Sci 2018; 131:jcs.203893. [PMID: 28839076 DOI: 10.1242/jcs.203893] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2017] [Accepted: 08/17/2017] [Indexed: 12/12/2022] Open
Abstract
Many questions remain about how the stacked structure of the Golgi is formed and maintained. In our previous study, we challenged this question using tobacco BY-2 cells and revealed that, upon Brefeldin A (BFA) treatment, previously undescribed small punctate structures containing a particular subset of cis-Golgi proteins are formed adjacent to the ER-exit sites and act as scaffolds for Golgi regeneration after BFA removal. In this study, we analyzed these structures further. The proteins that localize to these punctate structures originate from the cis-most cisternae. 3D time-lapse observations show that the trans-Golgi marker is transported through these structures during Golgi regeneration. These data indicate that the cis-most cisternae have a specialized region that receives cargo from the ER, which becomes obvious upon BFA treatment. Expression of a dominant mutant form of SAR1 does not affect the formation of the punctate structures. We propose to call these punctate structures the 'Golgi entry core compartment' (GECCO). They act as receivers for the rest of the Golgi materials and are formed independently of the COPII machinery.This article has an associated First Person interview with the first author of the paper.
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Affiliation(s)
- Yoko Ito
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Wako, Saitama 351-0198, Japan
| | - Tomohiro Uemura
- Laboratory of Developmental Cell Biology, Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Akihiko Nakano
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Wako, Saitama 351-0198, Japan.,Laboratory of Developmental Cell Biology, Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan
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28
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Suda Y, Kurokawa K, Nakano A. Regulation of ER-Golgi Transport Dynamics by GTPases in Budding Yeast. Front Cell Dev Biol 2018; 5:122. [PMID: 29473037 PMCID: PMC5810278 DOI: 10.3389/fcell.2017.00122] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2017] [Accepted: 12/28/2017] [Indexed: 01/21/2023] Open
Abstract
A large number of proteins are synthesized de novo in the endoplasmic reticulum (ER). They are transported through the Golgi apparatus and then delivered to their proper destinations. The ER and the Golgi play a central role in protein processing and sorting and show dynamic features in their forms. Ras super family small GTPases mediate the protein transport through and between these organelles. The ER-localized GTPase, Sar1, facilitates the formation of COPII transport carriers at the ER exit sites (ERES) on the ER for the transport of cargo proteins from the ER to the Golgi. The Golgi-localized GTPase, Arf1, controls intra-Golgi, and Golgi-to-ER transport of cargo proteins by the formation of COPI carriers. Rab GTPases localized at the Golgi, which are responsible for fusion of membranes, are thought to establish the identities of compartments. Recent evidence suggests that these small GTPases regulate not only discrete sites for generation/fusion of transport carriers, but also membrane dynamics of the organelles where they locate to ensure the integrity of transport. Here we summarize the current understandings about the membrane traffic between these organelles and highlight the cutting-edge advances from super-resolution live imaging of budding yeast, Saccharomyces cerevisiae.
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Affiliation(s)
- Yasuyuki Suda
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Saitama, Japan.,Laboratory of Molecular Cell Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Japan
| | - Kazuo Kurokawa
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Saitama, Japan
| | - Akihiko Nakano
- Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics, Saitama, Japan.,Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
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29
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Wang X, Chung KP, Lin W, Jiang L. Protein secretion in plants: conventional and unconventional pathways and new techniques. JOURNAL OF EXPERIMENTAL BOTANY 2017; 69:21-37. [PMID: 28992209 DOI: 10.1093/jxb/erx262] [Citation(s) in RCA: 60] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Protein secretion is an essential process in all eukaryotic cells and its mechanisms have been extensively studied. Proteins with an N-terminal leading sequence or transmembrane domain are delivered through the conventional protein secretion (CPS) pathway from the endoplasmic reticulum (ER) to the Golgi apparatus. This feature is conserved in yeast, animals, and plants. In contrast, the transport of leaderless secretory proteins (LSPs) from the cytosol to the cell exterior is accomplished via the unconventional protein secretion (UPS) pathway. So far, the CPS pathway has been well characterized in plants, with several recent studies providing new information about the regulatory mechanisms involved. On the other hand, studies on UPS pathways in plants remain descriptive, although a connection between UPS and the plant defense response is becoming more and more apparent. In this review, we present an update on CPS and UPS. With the emergence of new techniques, a more comprehensive understanding of protein secretion in plants can be expected in the future.
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Affiliation(s)
- Xiangfeng Wang
- State Key Laboratory of Agrobiotechnology, Centre for Cell and Developmental Biology, School of Life Sciences, The Chinese University of Hong Kong, Shatin, China
| | - Kin Pan Chung
- State Key Laboratory of Agrobiotechnology, Centre for Cell and Developmental Biology, School of Life Sciences, The Chinese University of Hong Kong, Shatin, China
| | - Weili Lin
- State Key Laboratory of Agrobiotechnology, Centre for Cell and Developmental Biology, School of Life Sciences, The Chinese University of Hong Kong, Shatin, China
| | - Liwen Jiang
- State Key Laboratory of Agrobiotechnology, Centre for Cell and Developmental Biology, School of Life Sciences, The Chinese University of Hong Kong, Shatin, China
- CUHK Shenzhen Research Institute, The Chinese University of Hong Kong, China
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30
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Saito K, Maeda M, Katada T. Regulation of the Sar1 GTPase Cycle Is Necessary for Large Cargo Secretion from the Endoplasmic Reticulum. Front Cell Dev Biol 2017; 5:75. [PMID: 28879181 PMCID: PMC5572378 DOI: 10.3389/fcell.2017.00075] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2017] [Accepted: 08/10/2017] [Indexed: 12/22/2022] Open
Abstract
Proteins synthesized within the endoplasmic reticulum (ER) are transported to the Golgi via coat protein complex II (COPII)-coated vesicles. The formation of COPII-coated vesicles is regulated by the GTPase cycle of Sar1. Activated Sar1 is recruited to ER membranes and forms a pre-budding complex with cargoes and the inner-coat complex. The outer-coat complex then stimulates Sar1 inactivation and completes vesicle formation. The mechanisms of forming transport carriers are well-conserved among species; however, in mammalian cells, several cargo molecules such as collagen, and chylomicrons are too large to be accommodated in conventional COPII-coated vesicles. Thus, special cargo-receptor complexes are required for their export from the ER. cTAGE5/TANGO1 complexes and their isoforms have been identified as cargo receptors for these macromolecules. Recent reports suggest that the cTAGE5/TANGO1 complex interacts with the GEF and the GAP of Sar1 and tightly regulates its GTPase cycle to accomplish large cargo secretion.
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Affiliation(s)
- Kota Saito
- Department of Physiological Chemistry, Graduate School of Pharmaceutical Sciences, University of TokyoTokyo, Japan
| | - Miharu Maeda
- Department of Physiological Chemistry, Graduate School of Pharmaceutical Sciences, University of TokyoTokyo, Japan
| | - Toshiaki Katada
- Department of Physiological Chemistry, Graduate School of Pharmaceutical Sciences, University of TokyoTokyo, Japan
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31
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Schoberer J, Strasser R. Plant glyco-biotechnology. Semin Cell Dev Biol 2017; 80:133-141. [PMID: 28688929 DOI: 10.1016/j.semcdb.2017.07.005] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2017] [Revised: 07/03/2017] [Accepted: 07/04/2017] [Indexed: 11/17/2022]
Abstract
Glycosylation is an important protein modification in all eukaryotes. Whereas the early asparagine-linked glycosylation (N-glycosylation) and N-glycan processing steps in the endoplasmic reticulum are conserved between mammals and plants, the maturation of complex N-glycans in the Golgi apparatus differs considerably. Due to a restricted number of Golgi-resident N-glycan processing enzymes and the absence of nucleotide sugars such as CMP-N-acetylneuraminic acid, plants produce only a limited repertoire of different N-glycan structures. Moreover, mammalian mucin-type O-glycosylation of serine or threonine residues has not been described in plants and the required machinery is not encoded in their genome which enables de novo build-up of the pathway. As a consequence, plants are very well-suited for the production of homogenous N- and O-glycans and are increasingly used for the production of recombinant glycoproteins with custom-made glycans that may result in the generation of biopharmaceuticals with improved therapeutic potential.
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Affiliation(s)
- Jennifer Schoberer
- Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Richard Strasser
- Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences, Vienna, Austria.
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32
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 or not 5519=5519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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33
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and updatexml(7827,concat(0x2e,0x71707a7171,(select (elt(7827=7827,1))),0x7162766a71),5439)# ubmy] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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34
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and 6475=('qpzqq'||(select case 6475 when 6475 then 1 else 0 end from rdb$database)||'qbvjq')# hcka] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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35
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 or row(6651,6872)>(select count(*),concat(0x71707a7171,(select (elt(6651=6651,1))),0x7162766a71,floor(rand(0)*2))x from (select 8166 union select 3967 union select 5546 union select 5314)a group by x)-- snjb] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and (1555=5860)*5860] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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37
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and 6238=concat(char(113)+char(112)+char(122)+char(113)+char(113),(select (case when (6238=6238) then char(49) else char(48) end)),char(113)+char(98)+char(118)+char(106)+char(113))-- orzw] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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38
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 or not 3930=3930-- kuvo] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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39
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and 7735=utl_inaddr.get_host_address(chr(113)||chr(112)||chr(122)||chr(113)||chr(113)||(select (case when (7735=7735) then 1 else 0 end) from dual)||chr(113)||chr(98)||chr(118)||chr(106)||chr(113))-- qjpw] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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40
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and (7752=6318)*6318# msqg] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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41
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 or updatexml(6141,concat(0x2e,0x71707a7171,(select (elt(6141=6141,1))),0x7162766a71),6507)] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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42
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and (select 3601 from(select count(*),concat(0x71707a7171,(select (elt(3601=3601,1))),0x7162766a71,floor(rand(0)*2))x from information_schema.plugins group by x)a)-- tmux] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and (select (case when (4915=4726) then null else cast((chr(111)||chr(87)||chr(97)||chr(72)) as numeric) end)) is null# prap] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 or extractvalue(3376,concat(0x5c,0x71707a7171,(select (elt(3376=3376,1))),0x7162766a71))# dfaf] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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45
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and 9781=convert(int,(select char(113)+char(112)+char(122)+char(113)+char(113)+(select (case when (9781=9781) then char(49) else char(48) end))+char(113)+char(98)+char(118)+char(106)+char(113)))# ppzo] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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46
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 having 1430=1430] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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47
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and make_set(3444=3444,8563)-- nety] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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48
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and 6485=5700#] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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49
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 or not 1773=1867-- cdjn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
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50
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Capasso S, Sticco L, Rizzo R, Pirozzi M, Russo D, Dathan NA, Campelo F, Galen J, Hölttä‐Vuori M, Turacchio G, Hausser A, Malhotra V, Riezman I, Riezman H, Ikonen E, Luberto C, Parashuraman S, Luini A, D'Angelo G. Sphingolipid metabolic flow controls phosphoinositide turnover at the
trans
‐Golgi network. EMBO J 2017. [DOI: 10.15252/embj.201696048 and 1384=4254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Serena Capasso
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
| | - Lucia Sticco
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Riccardo Rizzo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Marinella Pirozzi
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Domenico Russo
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Nina A Dathan
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Felix Campelo
- ICFO‐Institut de Ciencies Fotoniques The Barcelona Institute of Science and Technology Barcelona Spain
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Josse Galen
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
| | - Maarit Hölttä‐Vuori
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Gabriele Turacchio
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Angelika Hausser
- Institute of Cell Biology and Immunology University of Stuttgart Stuttgart Germany
| | - Vivek Malhotra
- Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain
- Universitat Pompeu Fabra Barcelona Spain
- Institució Catalana de Recerca i Estudis Avançats Barcelona Spain
| | - Isabelle Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Howard Riezman
- Department of Biochemistry NCCR Chemical Biology University of Geneva Geneva Switzerland
| | - Elina Ikonen
- Department of Anatomy Faculty of Medicine Minerva Research Institute for Medical Research University of Helsinki Helsinki Finland
| | - Chiara Luberto
- Stony Brook Cancer Center Health Science Center Stony Brook University Stony Brook NY USA
| | | | - Alberto Luini
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| | - Giovanni D'Angelo
- Istituto di Ricovero e Cura a Carattere Scientifico‐SDN Naples Italy
- Institute of Protein Biochemistry‐National Research Council Naples Italy
| |
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