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Kou B, Huo L, Cao M, Yu T, Wu Y, Hui K, Tan W, Yuan Y, Zhu X. Applying kitchen compost promoted soil chrysene degradation by optimizing microbial community structure. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 370:122761. [PMID: 39369537 DOI: 10.1016/j.jenvman.2024.122761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2024] [Revised: 09/14/2024] [Accepted: 09/29/2024] [Indexed: 10/08/2024]
Abstract
Chrysene, as a high molecular weight polycyclic aromatic hydrocarbon (PAH), has become an important factor in degrading soil quality and constraining the safe production of food crops. Compost has been widely used to amend contaminated soil. However, to date, the main components of kitchen compost that enhance the biodegradation of chrysene in the soil remain unidentified. Thus, in this study, the enhancing effect and mechanisms of kitchen compost (KC) and kitchen compost-derived dissolved organic matter (KCOM) on chrysene removal from soil were investigated through cultivation experiments combined with high-throughput sequencing technology. Additionally, the key components influencing the degradation of chrysene were identified. The results showed that KCOM was the main component of compost that promoted the degradation of chrysene. The average degradation rate of chrysene in 1% KC- and 1% KCOM-treated soil increased by 27.20% and 24.18%, respectively, at different levels of chrysene pollution compared with the control treatment (CK). KC and KCOM significantly increased soil nutrient content, accelerated humification of organic matter, and increased microbial activity in the chrysene-contaminated soil. Correlation analyses revealed that the application of KC and KCOM optimized the microbial community by altering soil properties and organic matter structure. This optimization enhanced the degradation of soil chrysene by increasing the abundance of chrysene-degrading functional bacteria from the genera Bacillus, Arthrobacter, Pseudomonas, Lysinibacillus, and Acinetobacter. This study provides insight into the identification of key components that promote chrysene degradation and into the microbial-enhanced remediation of chrysene-contaminated soil.
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Affiliation(s)
- Bing Kou
- State Key Laboratory of Environmental Criteria and Risk Assessment, and State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China; College of Urban and Environmental Science, Northwest University, Xi'an, 710127, China
| | - Lin Huo
- Swiss Federal Institute of Technology (ETH) Zurich, Universitaetstrasse 16, 8092, Zurich, Switzerland
| | - Minyi Cao
- College of Urban and Environmental Science, Northwest University, Xi'an, 710127, China
| | - Tingqiao Yu
- International Education College, Beijing Vocational College of Agriculture, Beijing, 102442, China
| | - Yuman Wu
- State Key Laboratory of Environmental Criteria and Risk Assessment, and State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Kunlong Hui
- State Key Laboratory of Environmental Criteria and Risk Assessment, and State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Wenbing Tan
- State Key Laboratory of Environmental Criteria and Risk Assessment, and State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Ying Yuan
- State Key Laboratory of Environmental Criteria and Risk Assessment, and State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China.
| | - Xiaoli Zhu
- College of Urban and Environmental Science, Northwest University, Xi'an, 710127, China.
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Liu P, Guo Z, Wang Y, He M, Kang Y, Wu H, Hu Z, Zhang J. Occurrence of polycyclic aromatic hydrocarbons in the Yellow River delta: Sources, ecological risks, and microbial response. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 370:122432. [PMID: 39243646 DOI: 10.1016/j.jenvman.2024.122432] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2024] [Revised: 08/22/2024] [Accepted: 09/04/2024] [Indexed: 09/09/2024]
Abstract
This research investigated the distribution, sources, and ecological risks of polycyclic aromatic hydrocarbons (PAHs) in the Yellow River Delta (YRD), China, emphasizing the response of soil microorganisms. The study involved quantitative analyses of 16 PAHs specified by the U.S. Environmental Protection Agency (USEPA) in both water and soil, utilizing metagenomic technique to determine the response of microbial communities and metabolism within the soil. Results noted that PAHs in the water mainly originate from pyrogenic source and in the soil originate from mixture source, with higher concentrations found in wetland areas compared to river regions. The ecological risk assessment revealed low-to-moderate risk. Microbial analysis demonstrated increased diversity and abundance of bacteria associated with PAHs in areas with higher PAHs pollution. Metagenomic insights revealed significant effects of organic carbon on PAHs degradation genes (ko00624 and ko00626), as well as significant differences in specific metabolic pathways including phenanthrene degradation, with key enzymes showing significant differences between the two environments. The study underscores the importance of understanding PAHs distribution and microbial responses to effectively manage and mitigate pollution in estuarine environments.
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Affiliation(s)
- Peiqiong Liu
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Zizhang Guo
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China.
| | - Yu Wang
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Mingyu He
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Yan Kang
- College of Safety and Environmental Engineering, Shandong University of Science and Technology, Qingdao, 266590, China
| | - Haiming Wu
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Zhen Hu
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Jian Zhang
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China; College of Chemistry, Chemical Engineering and Materials Science, Shandong Normal University, Jinan, 250014, China.
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3
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Němcová K, Lhotský O, Stavělová M, Komárek M, Semerád J, Filipová A, Najmanová P, Cajthaml T. Effects of different organic substrate compositions on the decontamination of aged PAH-polluted soils through outdoor co-composting. CHEMOSPHERE 2024; 362:142580. [PMID: 38866336 DOI: 10.1016/j.chemosphere.2024.142580] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Revised: 05/25/2024] [Accepted: 06/08/2024] [Indexed: 06/14/2024]
Abstract
The effects of different organic substrate compositions on the efficiency of outdoor co-composting as a bioremediation technology for decontaminating soil polluted by polycyclic aromatic hydrocarbons (PAHs) were investigated. Four different substrate mixtures and two different aged PAH-contaminated soils were used in a semi-pilot-scale experiment that lasted nearly 700 days. The two soils (A and B) differed concerning both the initial concentrations of the Ʃ16 US EPA PAHs (5926 vs. 369 mg kg-1, respectively) and the type of predominant PAH group by molecular weight. The experiments revealed that while the composition of the organic substrate had an impact on the rate of PAH degradation, it did not significantly influence the final extent of PAH degradation. Notably, the organic substrate consisting of green waste and wood chips (GW) was found to facilitate the most rapid rate of PAH degradation (first-order rate constant k = 0.033 ± 0.000 d-1 with soil A over the initial 42 days of the experiment and k = 0.036 ± 0.000 d-1 with soil B over the initial 56 days). Despite the differences in organic substrate compositions and types of soil being treated, PAH degradation levels exceeded at least 95% in all the treatments after more than 680 days of co-composting. Regardless of the composition, the removal of low- and medium- molecular-weight (2-4 rings) PAHs was nearly complete by the end of the experiment. Furthermore, high-molecular-weight PAHs (5 rings and more) were significantly degraded during co-composting, with reductions ranging from 54% to 79% in soil A and from 59% to 68% in soil B. All composts were dominated by Proteobacteria, Firmicutes, and Actinobacteria, with significant differences in abundance between soils. Genera with PAH degradation potentials were detected in all samples. The results of a battery of toxicity tests showed that there was almost no toxicity associated with the final composts.
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Affiliation(s)
- Kateřina Němcová
- Institute for Environmental Studies, Faculty of Science, Charles University, Benátská 2, CZ-128 01, Prague 2, Czech Republic; Institute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, CZ-142 20, Prague 4, Czech Republic
| | - Ondřej Lhotský
- Institute for Environmental Studies, Faculty of Science, Charles University, Benátská 2, CZ-128 01, Prague 2, Czech Republic; Dekonta, a.s., Dřetovice 109, CZ-273 42, Stehelčeves, Czech Republic
| | - Monika Stavělová
- AECOM CZ s.r.o., Trojská 92, CZ-171 00, Prague 7, Czech Republic
| | - Michael Komárek
- Faculty of Environmental Sciences, Czech University of Life Sciences Prague, Kamýcká 129, CZ-165 00, Prague - Suchdol, Czech Republic
| | - Jaroslav Semerád
- Institute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, CZ-142 20, Prague 4, Czech Republic
| | - Alena Filipová
- Institute for Environmental Studies, Faculty of Science, Charles University, Benátská 2, CZ-128 01, Prague 2, Czech Republic; Institute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, CZ-142 20, Prague 4, Czech Republic
| | - Petra Najmanová
- Dekonta, a.s., Dřetovice 109, CZ-273 42, Stehelčeves, Czech Republic
| | - Tomáš Cajthaml
- Institute for Environmental Studies, Faculty of Science, Charles University, Benátská 2, CZ-128 01, Prague 2, Czech Republic; Institute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, CZ-142 20, Prague 4, Czech Republic.
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Li Y, Liang H, Wang L, Chen G, Bai Y, Tang T, Gao D. Enhanced bioremediation of organically combined contaminated soil by white rot fungal agent: physiological characteristics and contaminants degradation. ENVIRONMENTAL TECHNOLOGY 2024:1-12. [PMID: 38522073 DOI: 10.1080/09593330.2024.2323025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Accepted: 02/18/2024] [Indexed: 03/26/2024]
Abstract
Microbial remediation of organically combined contaminated sites is currently facing technical challenges. White rot fungi possess broad-spectrum degradation capabilities, but most of the studies are conducted on polluted water bodies, and few research focus on the degradation of combined organically contaminated soils. This study aimed to investigate the physiological changes in Trametes versicolor to enhance its simultaneous degradation ability towards benzo(a)pyrene (BaP) and TPH. The results demonstrated that Trametes versicolor, when subjected to liquid fermentation, achieved an 88.08% degradation of individual BaP within 7 days. However, under the combined contamination conditions of BaP and TPH, the BaP degradation rate decreased to 69.25%, while the TPH degradation rate was only 16.95%. Furthermore, the degradation rate of BaP exhibited a significant correlation with the extracellular protein concentration and laccase activities. Conversely, the TPH degradation rate exhibited a significant and positive correlation with the intracellular protein concentration. Solid-state fermentation utilizing fungal agents proved to be the most effective method for removing BaP and TPH, yielding degradation rates of 56.16% and 15.73% respectively within 60 days. Overall, Trametes versicolor demonstrated a commendable capability for degrading combined PAHs-TPH pollutants, thereby providing theoretical insights and technical support for the remediation of organically combined contaminated sites.
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Affiliation(s)
- Ying Li
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
| | - Hong Liang
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
| | - Litao Wang
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
| | - Guanyu Chen
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
| | - Yuhong Bai
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
| | - Teng Tang
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
| | - Dawen Gao
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, People's Republic of China
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5
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Shang X, Wu S, Liu Y, Zhang K, Guo M, Zhou Y, Zhu J, Li X, Miao R. Rice husk and its derived biochar assist phytoremediation of heavy metals and PAHs co-contaminated soils but differently affect bacterial community. JOURNAL OF HAZARDOUS MATERIALS 2024; 466:133684. [PMID: 38310844 DOI: 10.1016/j.jhazmat.2024.133684] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Revised: 01/08/2024] [Accepted: 01/30/2024] [Indexed: 02/06/2024]
Abstract
In order to evaluate the feasibility of rice husk and rice husk biochar on assisting phytoremediation of polycyclic aromatic hydrocarbons (PAHs) and heavy metals (HMs) co-contaminated soils, a 150-day pot experiment planted with alfalfa was designed. Rice husk and its derived biochar were applied to remediate a PAHs, Zn, and Cr co-contaminated soil. The effects of rice husk and biochar on the removal and bioavailability of PAHs and HMs, PAH-ring hydroxylating dioxygenase gene abundance and bacterial community structure in rhizosphere soils were investigated. Results suggested that rice husk biochar had better performance on the removal of PAHs and immobilization of HMs than those of rice husk in co-contaminated rhizosphere soil. The abundance of PAH-degraders, which increased with the culture time, was positively correlated with PAHs removal. Rice husk biochar decreased the richness and diversity of bacterial community, enhanced the growth of Steroidobacter, Bacillus, and Sphingomonas in rhizosphere soils. However, Steroidobacter, Dongia and Acidibacter were stimulated in rice husk amended soils. According to the correlation analysis, Steroidobacter and Mycobacterium may play an important role in PAHs removal and HMs absorption. The combination of rice husk biochar and alfalfa would be a promising method to remediate PAHs and HMs co-contaminated soil.
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Affiliation(s)
- Xingtian Shang
- Henan Joint International Research Laboratory of Environmental Pollution Control Materials, College of Chemistry and Molecular Sciences, Henan University, Kaifeng 475004, China
| | - Sirui Wu
- Henan Joint International Research Laboratory of Environmental Pollution Control Materials, College of Chemistry and Molecular Sciences, Henan University, Kaifeng 475004, China
| | - Yuli Liu
- Henan Dabieshan National Observation and Research Field Station of Forest Ecosystem, International Joint Research Laboratory for Global Change Ecology, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Keke Zhang
- Henan Joint International Research Laboratory of Environmental Pollution Control Materials, College of Chemistry and Molecular Sciences, Henan University, Kaifeng 475004, China
| | - Meixia Guo
- Henan Joint International Research Laboratory of Environmental Pollution Control Materials, College of Chemistry and Molecular Sciences, Henan University, Kaifeng 475004, China.
| | - Yanmei Zhou
- Henan Joint International Research Laboratory of Environmental Pollution Control Materials, College of Chemistry and Molecular Sciences, Henan University, Kaifeng 475004, China
| | - Jiangwei Zhu
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Xuhui Li
- Henan Dabieshan National Observation and Research Field Station of Forest Ecosystem, Henan Engineering Research Centre for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng 475004 China.
| | - Renhui Miao
- Henan Dabieshan National Observation and Research Field Station of Forest Ecosystem, International Joint Research Laboratory for Global Change Ecology, School of Life Sciences, Henan University, Kaifeng 475004, China
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6
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Kaur R, Gupta S, Tripathi V, Chauhan A, Parashar D, Shankar P, Kashyap V. Microbiome based approaches for the degradation of polycyclic aromatic hydrocarbons (PAHs): A current perception. CHEMOSPHERE 2023; 341:139951. [PMID: 37652248 DOI: 10.1016/j.chemosphere.2023.139951] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2023] [Revised: 08/02/2023] [Accepted: 08/22/2023] [Indexed: 09/02/2023]
Abstract
Globally, polycyclic aromatic hydrocarbons (PAHs) pollution is primarily driven by their release into the air through various combustion processes, including burning fossil fuels such as coal, oil, and gas in motor vehicles, power plants, and industries, as well as burning organic matter like wood, tobacco, and food in fireplaces, cigarettes, and grills. Apart from anthropogenic pollution sources, PAHs also occur naturally in crude oil, and their potential release during oil extraction, refining processes, and combustion further contributes to contamination and pollution concerns. PAHs are resistant and persistent in the environment because of their inherent features, viz., heterocyclic aromatic ring configurations, hydrophobicity, and thermostability. A wide range of microorganisms have been found to be effective degraders of these recalcitrant contaminants. The presence of hydrocarbons as a result of numerous anthropogenic activities is one of the primary environmental concerns. PAHs are found in soil, water, and the air, making them ubiquitous in nature. The presence of PAHs in the environment creates a problem, as their presence has a detrimental effect on humans and animals. For a variety of life forms, PAH pollutants are reported to be toxic, carcinogenic, mutation-inducing, teratogenic, and immune toxicogenics. Degradation of PAHs via biological activity is an extensively used approach in which diverse microorganisms (fungal, algal, clitellate, and protozoan) and plant species and their derived composites are utilized as biocatalysts and biosurfactants. Some microbes have the ability to transform and degrade these PAHs, allowing them to be removed from the environment. The goal of this review is to provide a critical overview of the existing understanding of PAH biodegradation. It also examines current advances in diverse methodologies for PAH degradation in order to shed light on fundamental challenges and future potential.
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Affiliation(s)
- Rasanpreet Kaur
- Department of Biotechnology, GLA University, Mathura, 281406, Uttar Pradesh, India
| | - Saurabh Gupta
- Department of Biotechnology, GLA University, Mathura, 281406, Uttar Pradesh, India.
| | - Vishal Tripathi
- Department of Biotechnology, Graphic Era (Deemed to Be University), Dehradun 248002, Uttarakhand, India
| | - Arjun Chauhan
- Department of Biotechnology, GLA University, Mathura, 281406, Uttar Pradesh, India
| | - Deepak Parashar
- Department of Medicine, Medical College of Wisconsin, Milwaukee, WI, USA
| | - Prem Shankar
- Department of Neurobiology, The University of Texas Medical Branch, 301 University Blvd, Galveston, TX-77555, USA
| | - Vivek Kashyap
- Department of Immunology and Microbiology, School of Medicine, University of Texas Rio Grande Valley, McAllen, Texas, 78504, USA; South Texas Center of Excellence in Cancer Research, School of Medicine, University of Texas Rio Grande Valley, McAllen, TX 78504, USA.
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7
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Wu Y, Xi B, Fang F, Kou B, Gang C, Tang J, Tan W, Yuan Y, Yu T. Insights into relationships between polycyclic aromatic hydrocarbon concentration, bacterial communities and organic matter composition in coal gangue site. ENVIRONMENTAL RESEARCH 2023; 236:116502. [PMID: 37406721 DOI: 10.1016/j.envres.2023.116502] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 06/16/2023] [Accepted: 06/22/2023] [Indexed: 07/07/2023]
Abstract
Coal mining usually brought polycyclic aromatic hydrocarbons (PAHs) contamination. Relationships between the concentration of PAHs, bacterial communities and soil environmental factors were important for bioremediation of PAHs in soil. Total 4 kinds of soil samples with different concentrations of PAHs were selected from 7 typical coal gangue(CG) sites in Huainan, Anhui Province. The relationships between microorganisms, dissolved organic matter (DOM) composition and PAHs concentration were systematically analyzed in this work. Total 11 kinds of PAHs were enriched in the soil surface layer. That was attributed to the strong binding of soil organic matter (SOM) to PAHs. PAHs contamination reduced the diversity of soil microbial. The abundance of PAHs-degrading genera such as Arthrobacter decreased with the increasing concentration of PAHs. Mycobacterium increased with the increasing concentration of PAHs in all samples. The microbial activities decreased with increasing concentration of PAHs. The increasing contents of LWM-PAHs and DOM were beneficial to improve the activities of soil microbial. The increasing DOM aromaticity was beneficial to improve the bioavailability of PAHs according to the correlation analysis between PAHs content and DOM structural parameters. The obtained results provide a basis for better understanding the contamination characteristics and microbial communities of coal gangue PAH-contaminated sites.
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Affiliation(s)
- Yuman Wu
- State Key Laboratory of Environmental Criteria and Risk Assessment, And State Environmental Protection Key Laboratory of Simulation and Control of Groundwater, Chinese Research Academy of Environmental Sciences, Beijing 100012, China; College of Chemistry and Chemical Engineering, Xi'an Shiyou University, Xi'an 710065, China
| | - Beidou Xi
- State Key Laboratory of Environmental Criteria and Risk Assessment, And State Environmental Protection Key Laboratory of Simulation and Control of Groundwater, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
| | - Fei Fang
- Technical Centre for Soil, Agriculture and Rural Ecology and Environment, Ministry of Ecology and Environment, Beijing 100012, PR China
| | - Bing Kou
- State Key Laboratory of Environmental Criteria and Risk Assessment, And State Environmental Protection Key Laboratory of Simulation and Control of Groundwater, Chinese Research Academy of Environmental Sciences, Beijing 100012, China; College of Chemistry and Chemical Engineering, Xi'an Shiyou University, Xi'an 710065, China
| | - Chen Gang
- College of Chemistry and Chemical Engineering, Xi'an Shiyou University, Xi'an 710065, China
| | - Jun Tang
- State Key Laboratory of Environmental Criteria and Risk Assessment, And State Environmental Protection Key Laboratory of Simulation and Control of Groundwater, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
| | - Wenbing Tan
- State Key Laboratory of Environmental Criteria and Risk Assessment, And State Environmental Protection Key Laboratory of Simulation and Control of Groundwater, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
| | - Ying Yuan
- State Key Laboratory of Environmental Criteria and Risk Assessment, And State Environmental Protection Key Laboratory of Simulation and Control of Groundwater, Chinese Research Academy of Environmental Sciences, Beijing 100012, China.
| | - Tingqiao Yu
- International Education College, Beijing Vocational College of Agriculture, Beijing 102442, China
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8
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Li X, Wang M, Wen B, Zhang Q, Chen J, Li X, An Y. Reed-mushroom-fertilizer ecological agriculture in wetlands: Harvesting reed to cultivate mushroom and returning waste substrates to restore saline-alkaline marshes. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 878:162987. [PMID: 36958546 DOI: 10.1016/j.scitotenv.2023.162987] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Revised: 03/06/2023] [Accepted: 03/17/2023] [Indexed: 05/13/2023]
Abstract
Construction of wetland ecological agriculture is recommended to perform ecological function and produce considerable economic value. A mode of wetland ecological agriculture was established on inland saline-alkaline marshes in Northeast of China here. This study used reed as substrate to cultivate Pleurotus citrinopileatus and return the waste substrate (SMS) to ameliorate the saline-alkalized soil. The biological efficiency of mushroom was 69.01 %, and the contents of sugar, crude protein, crude fat, and amino acids were 30.82 %, 23.07 %, 1.58 %, and 19.48 %, respectively in P. citrinopileatus. The cultivated mushrooms had higher contents of Ca, Fe, Zn and Cu, with lower levels of harmful heavy metals. When compared with initial substrates, the SMS remained 93.42 % fiber, 87.08 % carbon, 97.72 % nitrogen, 51.35 % phosphorus, and more Ca contents. Compared with the control, SMS application decreased the soil pH and electro-conductivity by 12.33 % and 30.75 %, and increased total nitrogen and organic matter by 34.98 % and 46.55 %, respectively. In addition to the soil improvements, the above- and belowground biomasses of reed were increased by 172.92 % and 59.64 %, respectively. The study indicated that reed could be used as mushrooms substrates, subsequently applied SMS to ameliorate the saline-alkaline soil. Our wetland ecological agriculture mode of "reed-mushroom-fertilizer" is available and effective for saline-alkaline wetland functioning and economic development.
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Affiliation(s)
- Xiaoyu Li
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China.
| | - Miao Wang
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China
| | - Bolong Wen
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China
| | - Qilin Zhang
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China
| | - Junze Chen
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China
| | - Xiujun Li
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China
| | - Yu An
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China.
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9
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Nnadi MO, Bingle L, Thomas K. Bacterial community dynamics and associated genes in hydrocarbon contaminated soil during bioremediation using brewery spent grain. Access Microbiol 2023; 5:acmi000519.v3. [PMID: 37424545 PMCID: PMC10323799 DOI: 10.1099/acmi.0.000519.v3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2022] [Accepted: 04/05/2023] [Indexed: 07/11/2023] Open
Abstract
Brewery spent grain (BSG) has previously been exploited in bioremediation. However, detailed knowledge of the associated bacterial community dynamics and changes in relevant metabolites and genes over time is limited. This study investigated the bioremediation of diesel contaminated soil amended with BSG. We observed complete degradation of three total petroleum hydrocarbon (TPH C10-C28) fractions in amended treatments as compared to one fraction in the unamended, natural attenuation treatments. The biodegradation rate constant (k) was higher in amended treatments (0.1021k) than in unamended (0.059k), and bacterial colony forming units increased significantly in amended treatments. The degradation compounds observed fitted into the elucidated diesel degradation pathways and quantitative PCR results showed that the gene copy numbers of all three associated degradation genes, alkB, catA and xylE, were significantly higher in amended treatments. High-throughput sequencing of 16S rRNA gene amplicons showed that amendment with BSG enriched autochthonous hydrocarbon degraders. Also, community shifts of the genera Acinetobacter and Pseudomonas correlated with the abundance of catabolic genes and degradation compounds observed. This study showed that these two genera are present in BSG and thus may be associated with the enhanced biodegradation observed in amended treatments. The results suggest that the combined evaluation of TPH, microbiological, metabolite and genetic analysis provides a useful holistic approach to assessing bioremediation.
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Affiliation(s)
- Mabel Owupele Nnadi
- Faculty of Health Sciences & Wellbeing, University of Sunderland, Chester Road, Sunderland SR1 3SD, UK
| | - Lewis Bingle
- Faculty of Health Sciences & Wellbeing, University of Sunderland, Chester Road, Sunderland SR1 3SD, UK
| | - Keith Thomas
- Brewlab, Unit One, West Quay Court, Sunderland SR5 2TE, UK
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Wang J, Zhang H, Cai J, Li J, Sun B, Wu F. Effects of different carbon substrates on PAHs fractions and microbial community changes in PAHs-contaminated soils. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 324:121367. [PMID: 36858100 DOI: 10.1016/j.envpol.2023.121367] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 02/24/2023] [Accepted: 02/25/2023] [Indexed: 06/18/2023]
Abstract
Different types of carbon substrates were widely used in soil remediation. However, differences of their impacts and related mechanisms on degradation of polycyclic aromatic hydrocarbons (PAHs) and microbial community structures in contaminated soil still remain unclear. Here, we investigated the effects of corn straw (S), glucose (G), straw combined with glucose (SG), and sodium azide (N, as an abiotic control) on PAHs fractions and bacterial communities in soil. After 70 days' microcosm experiments, total PAHs concentrations were significantly reduced by 30.9%, 19.5% and 44.6% under S, G and SG treatments. Water soluble, acid soluble and residual PAHs under all treatments were significantly decreased after 70 days of incubation, while organically bound PAHs were increased by 11.4%, 22.7% and 36.1% under G, S and SG treatments. Additionally, straw and glucose application increased relative abundance related PAHs-degrading bacteria and the copy numbers of gram-negative (PAHs-RHDα GN) and gram-positive genes (PAHs-RHDα GP) in the contaminated soil. Redundancy analysis (RDA) and Random Forest (RF) indicated that PAHs fractions are crucial factors for biodegradation of PAHs in PAHs-contaminated soils amended with carbon substrates. These suggested that carbon substrates contributed to PAHs conversion from residual PAHs (nonlabile fractions) to organically bound PAHs and thus increased the potential for PAHs conversion to water-soluble and organic acid-soluble PAHs, which were more easy to be utilized by soil microorganisms. This study revealed the new insights of different carbon substrates on degradation and dynamic changes of PAHs fractions and the better potential of combined application of straw and glucose in enhancing degradation of PAHs in PAHs-contaminated soils.
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Affiliation(s)
- Jinfeng Wang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Institute of Eco-environment and Industrial Technology, Shanxi Agricultural University/Shanxi Province Key Laboratory of Soil Environment and Nutrient Resources, Taiyuan, 030031, Shanxi, PR China
| | - He Zhang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Jun Cai
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Jia Li
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China
| | - Benhua Sun
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Fuyong Wu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China.
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11
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Shen Q, Fu W, Chen B, Zhang X, Xing S, Ji C, Zhang X. Community response of soil microorganisms to combined contamination of polycyclic aromatic hydrocarbons and potentially toxic elements in a typical coking plant. Front Microbiol 2023; 14:1143742. [PMID: 36950156 PMCID: PMC10025358 DOI: 10.3389/fmicb.2023.1143742] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2023] [Accepted: 02/07/2023] [Indexed: 03/08/2023] Open
Abstract
Both polycyclic aromatic hydrocarbons (PAHs) and potentially toxic elements (PTEs) of coking industries impose negative effects on the stability of soil ecosystem. Soil microbes are regarded as an essential moderator of biochemical processes and soil remediation, while their responses to PAHs-PTEs combined contamination are largely unknown. In the present study, soil microbial diversity and community composition in the typical coking plant under the chronic co-exposure of PAHs and PTEs were investigated and microbial interaction networks were built to reveal microbial co-occurrence patterns. The results indicated that the concentrations of PAHs in the soil inside the coking plant were significantly higher than those outside the plant. The mean concentration of ∑16PAHs was 2894.4 ng·g-1, which is 5.58 times higher than that outside the plant. The average Hg concentration inside the coking plant was 22 times higher than the background value of Hebei province. The soil fungal community inside the coking plant showed lower richness compared with that of outside community, and there are significant difference in the bacterial and fungal community composition between inside and outside of coking plant (p < 0.01). Predicted contribution of different environmental factors to each dominant species based on random forest identified 20 and 25 biomarkers in bacteria and fungi, respectively, that were highly sensitive to coking plant soil in operation, such as Betaproteobacteria,Sordariomycetes and Dothideomycetes. Bacterial and fungal communities were shaped by the soil chemical properties (pH), PTEs (Hg), and PAHs together in the coking plant soils. Furthermore, the bacterial and fungal interaction patterns were investigated separately or jointly by intradomain and interdomain networks. Competition is the main strategy based on the co-exclusion pattern in fungal community, and the competitive relationship inside the coking plant is more complex than that outside the plant. In contrast, cooperation is the dominant strategy in bacterial networks based on the co-occurrence pattern. The present study provided insights into microbial response strategies and the interactions between bacteria and fungi under long-term combined contamination.
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Affiliation(s)
- Qihui Shen
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Wei Fu
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Baodong Chen
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | | | - Shuping Xing
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Chuning Ji
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Xin Zhang
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
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12
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Zheng Z, Liu W, Zhou Q, Li J, Zeb A, Wang Q, Lian Y, Shi R, Wang J. Effects of co-modified biochar immobilized laccase on remediation and bacterial community of PAHs-contaminated soil. JOURNAL OF HAZARDOUS MATERIALS 2023; 443:130372. [PMID: 36444066 DOI: 10.1016/j.jhazmat.2022.130372] [Citation(s) in RCA: 21] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2022] [Revised: 10/27/2022] [Accepted: 11/08/2022] [Indexed: 06/16/2023]
Abstract
Considering the stability and economy of immobilized enzymes, this study prepared co-modified biochar immobilized laccase product named Fe3O4@NaBC@GA@LC via orthogonal experimental design and explored its possibility of remediating polycyclic aromatic hydrocarbons (PAHs) contaminated soil in steel plants. Compared with the free laccase treatment, the relative activity of Fe3O4@NaBC@GA@LC remained 60 % after 50 days of incubation at room temperature. The relative activity of Fe3O4@NaBC@GA@LC could still retain nearly 80 % after five reuses. In the process of simulating the PAHs-contaminated site treatment experiment in Hangzhou Iron and steel plant, immobilized laccase exhibited efficient adsorption and degradation performances and even the removal rate of 5-ring PAHs reached more than 90 % in 40 days, resulting in improving urease activity and dehydrogenase in the soil and promoted the growth of a PAH degrading bacteria (Massilia). Our results further explained the efficient degradation effects of Fe3O4@NaBC@GA@LC on PAHs, which make it a promising candidate for PAHs-contaminated soil remediation.
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Affiliation(s)
- Zeqi Zheng
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education (MOE), College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China; Tianjin Key Laboratory of Urban Ecology Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Weitao Liu
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education (MOE), College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China; Tianjin Key Laboratory of Urban Ecology Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China.
| | - Qixing Zhou
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education (MOE), College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China; Tianjin Key Laboratory of Urban Ecology Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Jiantao Li
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education (MOE), College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China; Tianjin Key Laboratory of Urban Ecology Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Aurang Zeb
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education (MOE), College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China; Tianjin Key Laboratory of Urban Ecology Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Qi Wang
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education (MOE), College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China; Tianjin Key Laboratory of Urban Ecology Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Yuhang Lian
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education (MOE), College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China; Tianjin Key Laboratory of Urban Ecology Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Ruiying Shi
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education (MOE), College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China; Tianjin Key Laboratory of Urban Ecology Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Jianlin Wang
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education (MOE), College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China; Tianjin Key Laboratory of Urban Ecology Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
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13
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Zhang X, Zhang Y, Wang X, Zhang L, Ning G, Feng S, Zhang A, Yang Z. Enhancement of soil high-molecular-weight polycyclic aromatic hydrocarbon degradation by Fusarium sp. ZH-H2 using different carbon sources. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2023; 249:114379. [PMID: 36508814 DOI: 10.1016/j.ecoenv.2022.114379] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 11/26/2022] [Accepted: 11/29/2022] [Indexed: 06/17/2023]
Abstract
High-molecular-weight PAHs (HMW-PAHs) in soil cannot be easily degraded. However, nutrient supplementation could stimulate the growth of exogenously added strains to enhance the degradation of HMW-PAHs in polluted soil. This study evaluated the applicability of Fusarium sp. ZH-H2, a polycyclic aromatic hydrocarbon (PAH)-degrading strain isolated by our research group, for the bioremediation of contaminated soil from the Hebei coal mining area in China. A soil incubation experiment was conducted to investigate the effect of two carbon sources and different carbon, nitrogen, and phosphorus (C:N:P) ratios on the remediation of high-molecular-weight PAHs (HMW-PAHs) in soil by Fusarium sp. ZH-H2, as well as the induction of lignin peroxidase activity. Our findings indicated that the HDF2 treatment (equal parts of humic acid and starch as carbon sources at a 50:1:0.5 C:N:P ratio) enhanced the removal rate of total HMW-PAHs from soil, reaching a maximum removal rate of 37.15 %. The removal rates of Pyr (a 4-ring PAH), BaP (a 5-ring PAH), and BghiP (a 6-ring PAH) were the highest in HDF2 treatment, and the removal rates were 39.51 %, 54.63 %, and 38.60 %, respectively. Compared with the ZH-H2 treatment, different carbon sources and C:N:P ratios significantly induced soil lignin peroxidase activity and the HDF2 treatment also resulted in the highest enzyme activity (up to 34.68 U/L). Furthermore, there was a significant or highly significant linear positive correlation between the removal rate of HMW-PAHs and enzyme activity in all cases. Our findings suggest that the optimal HMW-PAH degradation performance and enhancement of lignin peroxidase activity by ZH-H2 were achieved when both starch and humic acid were used as carbon sources at a C:N:P ratio of 50:1:0.5.
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Affiliation(s)
- Xiaoxue Zhang
- College of Resources and Environmental Sciences, Key Laboratory for Farmland Eco-environment of Hebei Province, Hebei, Baoding 0710001, China
| | - Yukun Zhang
- College of Resources and Environmental Sciences, Key Laboratory for Farmland Eco-environment of Hebei Province, Hebei, Baoding 0710001, China
| | - Xiaomin Wang
- College of Resources and Environmental Sciences, Key Laboratory for Farmland Eco-environment of Hebei Province, Hebei, Baoding 0710001, China
| | - Lixiu Zhang
- College of Resources and Environmental Sciences, Key Laboratory for Farmland Eco-environment of Hebei Province, Hebei, Baoding 0710001, China
| | - Guohui Ning
- College of Resources and Environmental Sciences, Key Laboratory for Farmland Eco-environment of Hebei Province, Hebei, Baoding 0710001, China
| | - Shengdong Feng
- College of Resources and Environmental Sciences, Key Laboratory for Farmland Eco-environment of Hebei Province, Hebei, Baoding 0710001, China
| | - Aijun Zhang
- College of Resources and Environmental Sciences, Key Laboratory for Farmland Eco-environment of Hebei Province, Hebei, Baoding 0710001, China.
| | - Zhixin Yang
- College of Resources and Environmental Sciences, Key Laboratory for Farmland Eco-environment of Hebei Province, Hebei, Baoding 0710001, China; State Key Laboratory of North China Crop Improvement and Regulation, Baoding 071001, China.
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14
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Bao H, Wang J, Zhang H, Pan G, Li J, Wu F. Effects of Corn Straw and Citric Acid on Removal of PAHs in Contaminated Soil Related to Changing of Bacterial Community and Functional Gene Expression. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2022; 108:1147-1152. [PMID: 35171301 DOI: 10.1007/s00128-022-03477-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Accepted: 02/09/2022] [Indexed: 06/14/2023]
Abstract
Root exudates can stimulate microbial degradation in rhizosphere, but it is unclear whether the rhizodegradation of polycyclic aromatic hydrocarbons (PAHs) occurs in corn straw-amended soil. Either citric acid or corn straw was added into PAHs-contaminated soil to investigate their effect on the removal of PAHs. Either corn straw (Y) or combined application of corn straw and citric acid (YN100) significantly (p < 0.05) enhanced the removal of soil PAHs by 8.43% and 18.62%, respectively. Both Y and YN100 treatments obviously increased the abundance of PAHs degraders and the potential hosts of PAH-ring hydroxylating dioxygenase (PAH-RHDα) genes. Interestingly, the copies of PAH-RHDα Gram-negative bacteria genes under YN100 treatment was significantly (p < 0.05) higher than those under Y treatment. The present results indicated that combined application of corn straw and citric acid could efficiently enhance the removal of PAHs in soil, mainly via increasing the relative abundances of PAH-degrading bacteria and the expression of PAH-RHDα genes in contaminated soil.
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Affiliation(s)
- Huanyu Bao
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China
- Key Laboratory of Plant Nutrition and the Agri-Environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling, 712100, Shaanxi, People's Republic of China
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin, 150090, People's Republic of China
| | - Jinfeng Wang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China
- Key Laboratory of Plant Nutrition and the Agri-Environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling, 712100, Shaanxi, People's Republic of China
| | - He Zhang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China
- Key Laboratory of Plant Nutrition and the Agri-Environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling, 712100, Shaanxi, People's Republic of China
| | - Guodong Pan
- Jining Ecological Environment Monitoring Center of Shandong Province, Jining, 272100, People's Republic of China
| | - Jiao Li
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China
- Key Laboratory of Plant Nutrition and the Agri-Environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling, 712100, Shaanxi, People's Republic of China
| | - Fuyong Wu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China.
- Key Laboratory of Plant Nutrition and the Agri-Environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling, 712100, Shaanxi, People's Republic of China.
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15
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Influence of Organic Amendments and Moisture Regime on Soil CO2-C Efflux and Polycyclic Aromatic Hydrocarbons (PAHs) Degradation. SUSTAINABILITY 2022. [DOI: 10.3390/su14074116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
In this study, a 30-day incubation experiment was performed to investigate the interactive effects of soil moisture content and two types of organic manure (animal manure: M and wheat straw: WS) on organic C mineralization and the degradation of PAH compounds. Specifically, washed sandy soil sample free from PAHs was treated with combined standard solution containing six different PAHs; pyrene (Pyr), fluoranthene (Flt), benzo[a]pyrene (BaP), benzo[g,h,i]perylene (BghiP), benzo[k]fluoranthene (BkF), and indeno[123-cd]pyrene (IP). The soil samples treated with PAHs were amended with M or WS and then, the soil samples were incubated and subjected to two levels of moisture content (50% and 100% field capacity, FC). The results indicate that CO2–C rates were the highest at day 1, but they tended to be decreased sharply when incubation time increased. The results showed that the higher rate of CO2-C efflux rate and cumulative were observed in M and WS treatments at 100% FC. Applying organic amendments at 50% FC increased the total cumulative CO2-C from 21.6 mg kg−1 to 228 mg kg−1 for M and to 216 mg kg−1 for WS. Meanwhile, applying organic amendments at 50% FC increased the total cumulative CO2-C from 30 mg kg−1 to 381 mg kg−1 for M and to 492 mg kg−1 for WS. The highest increases at 100% FC could be explained by the optimum water content at field capacity. PAHs concentrations decreased significantly in the presence of organic amendments in relation to enhance CO2-C efflux (soil respiration) and to decrease soil pH. It could be concluded that applying organic amendments might be a useful technique to remediate soil PAHs through mineralization.
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16
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Omoni VT, Ibeto CN, Lag-Brotons AJ, Bankole PO, Semple KT. Impact of lignocellulosic waste-immobilised white-rot fungi on enhancing the development of 14C-phenanthrene catabolism in soil. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 811:152243. [PMID: 34921880 DOI: 10.1016/j.scitotenv.2021.152243] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2021] [Revised: 11/30/2021] [Accepted: 12/04/2021] [Indexed: 06/14/2023]
Abstract
In this study, an investigation was carried out to explore the the impact of white-rot fungi (WRF) on enhancing the development of phenanthrene catabolism in soil over time (1, 25, 50, 75 and 100 d). The WRF were immobilised on spent brewery grains (SBG) prior to inoculation to the soil. The results showed that SBG-immobilised WRF-amended soils reduced the lag phases and increased the extents of 14C-phenanthrene mineralisation. Greater reductions in the lag phases and increases in the rates of mineralisation were observed in immobilised Trametes versicolor-amended soil compared to the other WRF-amendments. However, the presence of Pleurotus ostreatus and Phanerochaete chrysosporium influenced biodegradation more strongly than the other fungal species. In addition, fungal enzyme activities increased in the amended soils and positively correlated with the extents of 14C-phenanthrene mineralisation in all soil amendments. Maximum ligninolytic enzyme activities were observed in P. ostreatus-amended soil. Microbial populations increased in all amended soils while PAH-degrading fungal numbers increased with increased soil-PAH contact time and strongly positively correlated with fastest rates of mineralisation. The findings presented in this study demonstrate that inoculating the soil with these immobilised WRFs generally enhanced the mineralisation of the 14C-phenanthrene in soil. This has the potential to be used to stimulate or enhance PAH catabolism in field-contaminated soils.
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Affiliation(s)
- Victor T Omoni
- Lancaster Environment Centre, Lancaster University, Lancaster LA1 4YQ, UK; Department of Microbiology, Federal University of Agriculture, Makurdi P.M.B 2373, Nigeria
| | - Cynthia N Ibeto
- Lancaster Environment Centre, Lancaster University, Lancaster LA1 4YQ, UK; Department of Pure and Industrial Chemistry, University of Nigeria, Nsukka, Nigeria
| | | | - Paul O Bankole
- Lancaster Environment Centre, Lancaster University, Lancaster LA1 4YQ, UK; Department of Pure and Applied Botany, Federal University of Agriculture, Abeokuta, Nigeria
| | - Kirk T Semple
- Lancaster Environment Centre, Lancaster University, Lancaster LA1 4YQ, UK.
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Geng S, Qin W, Cao W, Wang Y, Ding A, Zhu Y, Fan F, Dou J. Pilot-scale bioaugmentation of polycyclic aromatic hydrocarbon (PAH)-contaminated soil using an indigenous bacterial consortium in soil-slurry bioreactors. CHEMOSPHERE 2022; 287:132183. [PMID: 34500332 DOI: 10.1016/j.chemosphere.2021.132183] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2021] [Revised: 08/08/2021] [Accepted: 09/04/2021] [Indexed: 06/13/2023]
Abstract
Soil-slurry bioreactor based bioremediation of polycyclic aromatic hydrocarbons (PAHs) contaminated soil was studied through laboratory and pilot-scale trials, in which the degradation mechanism was explored. Indigenous PAH-degrading consortium was firstly screened out and it degraded 80.5% of total PAHs in lab-scale bioreactors. Then a pilot-scale trial lasting 410 days was conducted in two bioreactors of 1.5 m3 to examine the operating parameters and validate the optimum running conditions. During the initial 200 days, the crucial running parameters affecting PAH removal were evaluated and selected. Subsequently, an average PAH removal rate of 93.4% was achieved during 15 consecutive batches (210 days) under the optimum running conditions. The kinetic analysis showed that the reactor under optimum conditions achieved the highest PAH degradation rate of 0.1795 day-1 and the shortest half-life of 3.86 days. Notably, efficient mass transfer of PAHs and high biodegradation capability by bioaugmented consortia in soil-slurry bioreactors were two key mechanisms for appreciable PAH removal performance. Under the optimal operating conditions, the degradation rate of low-molecular-weight (LMW) PAHs was significantly higher than high-molecular-weight (HMW) PAHs; when the mass transfer was limited, there was no significant difference between their degradation behaviors. Both microbial co-metabolism and collaborative metabolism might occur when all PAHs demonstrated low degradation rates. The findings provide insightful guidance on the future assessment and remediation practices of PAH-contaminated sites.
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Affiliation(s)
- Shuying Geng
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Wei Qin
- School of Environment, Tsinghua University, Beijing, 100084, PR China
| | - Wei Cao
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Yingying Wang
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Aizhong Ding
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Yi Zhu
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China
| | - Fuqiang Fan
- Advanced Institute of Natural Sciences, Beijing Normal University at Zhuhai, Zhuhai, 519087, PR China.
| | - Junfeng Dou
- Engineering Research Center of Ministry of Education on Groundwater Pollution Control and Remediation, College of Water Sciences, Beijing Normal University, Beijing, 100875, PR China.
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18
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Wang J, Bao H, Pan G, Zhang H, Li J, Li J, Cai J, Wu F. Combined application of rhamnolipid and agricultural wastes enhances PAHs degradation via increasing their bioavailability and changing microbial community in contaminated soil. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 294:112998. [PMID: 34126539 DOI: 10.1016/j.jenvman.2021.112998] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Revised: 05/17/2021] [Accepted: 06/02/2021] [Indexed: 06/12/2023]
Abstract
Either biosurfactants or agricultural wastes were frequently used to enhance degradation of PAHs in soil, but there is still not clear whether combined application of biosurfactants and agricultural wastes is more efficient. Rhamnolipid and/or agricultural wastes (mushroom substrate or maize straw) were mixed with PAHs-contaminated soil to explore their performances in the removal of PAHs. The present study showed that rhamnolipid combined with mushroom substrate (MR, 30.36%) or maize straw (YR, 30.76%) significantly enhanced the degradation of soil PAHs compared with single application of mushroom substrate (M, 25.53%) or maize straw (Y, 25.77%) or no addition (19.38%). The addition of agricultural wastes significantly (p < 0.001) enhanced concentration of dissolved organic carbon (DOC) in soil. The combined application obviously improved the bioavailability of PAHs in soils and exhibited synergistic effects on concentration of organic acid-soluble HMW PAHs and the degradation rate of total HMW PAHs. Meanwhile, the combined application significantly (p < 0.01) enhanced the abundance of dominant bacterial and fungal genera being connected with PAHs degradation. The removal rate of PAHs was positively correlated with the dominant genera of bacteria (r = 0.539-0.886, p < 0.05) and fungi (r = 0.526-0.867, p < 0.05) related to PAHs degradation. Overall, the combined application exhibited a better performance in the removal of PAHs in contaminated soil via increasing their bioavailability and changing microbial communities in soil.
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Affiliation(s)
- Jinfeng Wang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Huanyu Bao
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin, 150090, PR China
| | - Guodong Pan
- Jining Ecological Environment Monitoring Center of Shandong Province, Jining, 272100, PR China
| | - He Zhang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Jia Li
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Jiao Li
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Jun Cai
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Fuyong Wu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China.
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19
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Hoang SA, Sarkar B, Seshadri B, Lamb D, Wijesekara H, Vithanage M, Liyanage C, Kolivabandara PA, Rinklebe J, Lam SS, Vinu A, Wang H, Kirkham MB, Bolan NS. Mitigation of petroleum-hydrocarbon-contaminated hazardous soils using organic amendments: A review. JOURNAL OF HAZARDOUS MATERIALS 2021; 416:125702. [PMID: 33866291 DOI: 10.1016/j.jhazmat.2021.125702] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2021] [Revised: 03/08/2021] [Accepted: 03/18/2021] [Indexed: 06/12/2023]
Abstract
The term "Total petroleum hydrocarbons" (TPH) is used to describe a complex mixture of petroleum-based hydrocarbons primarily derived from crude oil. Those compounds are considered as persistent organic pollutants in the terrestrial environment. A wide array of organic amendments is increasingly used for the remediation of TPH-contaminated soils. Organic amendments not only supply a source of carbon and nutrients but also add exogenous beneficial microorganisms to enhance the TPH degradation rate, thereby improving the soil health. Two fundamental approaches can be contemplated within the context of remediation of TPH-contaminated soils using organic amendments: (i) enhanced TPH sorption to the exogenous organic matter (immobilization) as it reduces the bioavailability of the contaminants, and (ii) increasing the solubility of the contaminants by supplying desorbing agents (mobilization) for enhancing the subsequent biodegradation. Net immobilization and mobilization of TPH have both been observed following the application of organic amendments to contaminated soils. This review examines the mechanisms for the enhanced remediation of TPH-contaminated soils by organic amendments and discusses the influencing factors in relation to sequestration, bioavailability, and subsequent biodegradation of TPH in soils. The uncertainty of mechanisms for various organic amendments in TPH remediation processes remains a critical area of future research.
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Affiliation(s)
- Son A Hoang
- Global Centre for Environmental Remediation, The University of Newcastle, Callaghan, NSW 2308, Australia; Division of Urban Infrastructural Engineering, Mien Trung University of Civil Engineering, Phu Yen 56000, Vietnam
| | - Binoy Sarkar
- Lancaster Environment Centre, Lancaster University, Lancaster LA1 4YQ, United Kingdom
| | - Balaji Seshadri
- Global Centre for Environmental Remediation, The University of Newcastle, Callaghan, NSW 2308, Australia
| | - Dane Lamb
- Global Innovative Centre for Advanced Nanomaterials, School of Engineering, Faculty of Engineering and Built Environment, The University of Newcastle, Callaghan, NSW 2308, Australia
| | - Hasintha Wijesekara
- Department of Natural Resources, Faculty of Applied Sciences, Sabaragamuwa University of Sri Lanka, P.O. Box 02, Belihuloya 70140, Sri Lanka
| | - Meththika Vithanage
- Ecosphere Resilience Research Centre, Faculty of Applied Sciences, University of Sri Jayewardenepura, Nugegoda 10250, Sri Lanka
| | - Chathuri Liyanage
- Ecosphere Resilience Research Centre, Faculty of Applied Sciences, University of Sri Jayewardenepura, Nugegoda 10250, Sri Lanka
| | - Pabasari A Kolivabandara
- Ecosphere Resilience Research Centre, Faculty of Applied Sciences, University of Sri Jayewardenepura, Nugegoda 10250, Sri Lanka
| | - Jörg Rinklebe
- University of Wuppertal, School of Architecture and Civil Engineering, Institute of Foundation Engineering, Water, and Waste Management, Laboratory of Soil, and Groundwater-Management, Pauluskirchstraße 7, 42285 Wuppertal, Germany; Department of Environment, Energy and Geoinformatics, Sejong University, 98 Gunja-Dong, Guangjin-Gu, Seoul, Republic of Korea
| | - Su Shiung Lam
- Pyrolysis Technology Research Group, Institute of Tropical Aquaculture and Fisheries (AKUATROP) & Institute of Tropical Biodiversity and Sustainable Development (Bio-D Tropika), Universiti Malaysia Terengganu, 21030 Kuala Nerus, Terengganu, Malaysia
| | - Ajayan Vinu
- Global Innovative Centre for Advanced Nanomaterials, School of Engineering, Faculty of Engineering and Built Environment, The University of Newcastle, Callaghan, NSW 2308, Australia
| | - Hailong Wang
- Biochar Engineering Technology Research Center of Guangdong Province, School of Environmental and Chemical Engineering, Foshan University, Foshan, Guangdong 528000, China
| | - M B Kirkham
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - Nanthi S Bolan
- Global Centre for Environmental Remediation, The University of Newcastle, Callaghan, NSW 2308, Australia.
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20
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Liao Q, Liu H, Lu C, Liu J, Waigi MG, Ling W. Root exudates enhance the PAH degradation and degrading gene abundance in soils. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 764:144436. [PMID: 33401039 DOI: 10.1016/j.scitotenv.2020.144436] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2020] [Revised: 12/07/2020] [Accepted: 12/08/2020] [Indexed: 06/12/2023]
Abstract
Root exudates could influence the bioavailability of polycyclic aromatic hydrocarbons (PAHs), provide nutrients for soil microorganisms, and affect PAH biodegradation. However, it remains unclear how a bacterial community and its PAH-degrading genes play crucial roles in PAH biodegradation and respond to root exudates. In this study, a 32-day soil microcosm study was conducted to explore the impacts of artificial and actual root exudates on PAH degradation, degrading genes, and bacterial community structure. The results showed that 10-100 mg DOC/kg artificial and actual root exudates promoted the degradation of naphthalene, phenanthrene, and pyrene in soils, and their percent removal increased initially and then decreased with the increasing root exudates. Quantitative polymerase chain reaction analysis and 16S rRNA gene high-throughput sequencing suggested that the artificial root exudates significantly promoted the Nocardioides and Arthrobacter genera, which may harbor the nidA gene (the representative PAH-degrading gene from Gram-positive bacteria). In contrast, actual root exudates significantly stimulated the Pseudomonas genus that may harbor the nahAc gene (the representative PAH-degrading gene from Gram-negative bacteria). The correlation analysis further indicated that the absolute abundance of PAH degraders and degrading genes had strong correlations with PAH degradation efficiency. Therefore, these findings suggest that root exudates enhanced PAH biodegradation probably due to increases in abundance of both PAH-degraders and their degrading genes.
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Affiliation(s)
- Qihang Liao
- Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Hua Liu
- College of Economics and Management, Nanjing Agricultural University, Nanjing 210095, China
| | - Chao Lu
- Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Juan Liu
- Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Michael Gatheru Waigi
- Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Wanting Ling
- Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China.
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21
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Wang S, Wang D, Yu Z, Dong X, Liu S, Cui H, Sun B. Advances in research on petroleum biodegradability in soil. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2021; 23:9-27. [PMID: 33393551 DOI: 10.1039/d0em00370k] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
With the increased demand for petroleum and petroleum products from all parts of the society, environmental pollution caused by petroleum development and production processes is becoming increasingly serious. Soil pollution caused by petroleum seriously affects environmental quality in addition to human lives and productivity. At present, petroleum in soil is mainly degraded by biological methods. In their natural state, native bacteria in the soil spontaneously degrade petroleum pollutants that enter the soil; however, when the pollution levels increase, the degradation rates decrease, and it is necessary to add nutrients, dissolved oxygen, biosurfactants and other additives to improve the degradation ability of the native bacteria in the soil. The degradation process can also be enhanced by adding exogenous petroleum-degrading bacteria, microbial immobilization technologies, and microbial fuel cell technologies.
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Affiliation(s)
- Song Wang
- School of Earth Science, Northeast Petroleum University, Daqing, China
| | - Dan Wang
- School of Earth Science, Northeast Petroleum University, Daqing, China
| | - Zhongchen Yu
- School of Civil Architecture Engineering, Northeast Petroleum University, Daqing, China.
| | - Xigui Dong
- 2nd Oil Production Plant Daqing Oilfield Co. Ltd, Daqing, China
| | - Shumeng Liu
- 2nd Oil Production Plant Daqing Oilfield Co. Ltd, Daqing, China
| | - Hongmei Cui
- School of Civil Architecture Engineering, Northeast Petroleum University, Daqing, China.
| | - Bing Sun
- 2nd Oil Production Plant Daqing Oilfield Co. Ltd, Daqing, China
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22
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Song L, Niu X, Tian Y, Xiao Y. Assessment of PAH degradation potential of native species from a coking plant through identifying of the beneficial bacterial community within the rhizosphere soil. CHEMOSPHERE 2021; 264:128513. [PMID: 33059278 DOI: 10.1016/j.chemosphere.2020.128513] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Revised: 09/12/2020] [Accepted: 09/29/2020] [Indexed: 06/11/2023]
Abstract
Understanding the mechanisms underlying plant-rhizobacteria interactions in field-contaminated soils is crucial for designing effective rhizoremediation strategies. This study aimed to test the ability of four native herb species to remove polycyclic aromatic hydrocarbons (PAHs) and to analyze their associated bacterial community structures and functional genes within the rhizosphere from the abandoned site of a former Shenyang coking plant in China; the bulk soil was collected as control. All four species removed PAHs, of which the rhizosphere of Kochia scoparia had the highest PAH removal rate (almost 30.2%). Although the composition of the bacterial community within the rhizosphere varied among plant species, all plant species could promote the growth of Sphingomonas, Pedomicrobium, Rhodoplanes, Blastoccus, Mycobacterium, Devosia, and Pseudomonas, and their relative abundance positively correlated with the removal rates of PAHs, soil moisture, and total carbon/total nitrogen in the rhizosphere. Moreover, the activities of 1-aminocyclopropane-1 -carboxylic deaminase gene and Gram-negative ring-hydroxylating dioxygenase gene significantly (P < 0.05) increased compared with those in the control, and these activities had a strong positive correlation with the removal rates of PAHs [r = 0.759 (P < 0.01) and 0.87 (P < 0.01), respectively]. The findings of this study indicated that PAHs were the main factor driving the composition of beneficial bacteria in PAH rhizodegradation, and the PAH rhizoremediation of native plants grown in coking plant can be controlled though altering soil properties.
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Affiliation(s)
- Lichao Song
- College of Land and Environment, Shenyang Agricultural University, Shenyang, 110866, PR China; Key Laboratory of Northeast Arable Land Conservation of Ministry of Agriculture, Shenyang Agricultural University, Shenyang, 110866, PR China.
| | - Xuguang Niu
- College of Land and Environment, Shenyang Agricultural University, Shenyang, 110866, PR China; Key Laboratory of Northeast Arable Land Conservation of Ministry of Agriculture, Shenyang Agricultural University, Shenyang, 110866, PR China
| | - Yumeng Tian
- College of Land and Environment, Shenyang Agricultural University, Shenyang, 110866, PR China; Key Laboratory of Northeast Arable Land Conservation of Ministry of Agriculture, Shenyang Agricultural University, Shenyang, 110866, PR China
| | - Yinong Xiao
- College of Land and Environment, Shenyang Agricultural University, Shenyang, 110866, PR China; Key Laboratory of Northeast Arable Land Conservation of Ministry of Agriculture, Shenyang Agricultural University, Shenyang, 110866, PR China
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23
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Zhou J, Ge W, Zhang X, Wu J, Chen Q, Ma D, Chai C. Effects of spent mushroom substrate on the dissipation of polycyclic aromatic hydrocarbons in agricultural soil. CHEMOSPHERE 2020; 259:127462. [PMID: 32590177 DOI: 10.1016/j.chemosphere.2020.127462] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2020] [Revised: 06/15/2020] [Accepted: 06/16/2020] [Indexed: 06/11/2023]
Abstract
Spent mushroom substrate (SMS) is an agricultural waste with a high potential for polycyclic aromatic hydrocarbons (PAH) removal in aged contaminated soils. In this study, fresh and air-dried Pleurotus ostreatus, Pleurotus eryngii, and Auricularia auricular SMSs were used to remove PAHs in agricultural soil under 60-day incubation. The potential of SMS in PAH dissipation was studied by detecting the dissipation rate and the soil physicochemical index, enzyme activity, PAH-degradation bacterial biomass, and microbial diversity. Results showed that SMS significantly enhanced the dissipation of PAHs and fresh SMS had a better effect than air-dried SMS. The highest dissipation rate of 16 PAHs was 34.5%, which was observed in soil amended with fresh P. eryngii SMS, and the PAH dissipation rates with low and high molecular weights were 41.3% and 19.4%, respectively. By comparison, fresh P. eryngii SMS presented high nutrient contents, which promoted the development of PAH-degrading bacteria and changed the soil bacterial community involved in degradation, thereby promoting the PAH dissipation. The lignin-degrading enzymes in fresh SMS were abundant, and the laccase and manganese peroxidase activities in the treatment of fresh P. eryngii SMS was higher than those in other treatments. Fresh P. eryngii SMS improved the relative abundance of Microbacterium, Rhizobium, and Pseudomonas in soil, which were all related to PAH degradation. Consequently, adding fresh P. eryngii SMS was an effective method for remediating aged PAH-contaminated agricultural soils.
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Affiliation(s)
- Jiajing Zhou
- Qingdao Engineering Research Center for Rural Environment, Qingdao Agricultural University, Qingdao, 266109, China
| | - Wei Ge
- Shandong Province Key Laboratory of Applied Mycology, Qingdao, 266109, China
| | - Xiaomei Zhang
- Qingdao Engineering Research Center for Rural Environment, Qingdao Agricultural University, Qingdao, 266109, China
| | - Juan Wu
- Qingdao Engineering Research Center for Rural Environment, Qingdao Agricultural University, Qingdao, 266109, China
| | - Qinghua Chen
- Qingdao Engineering Research Center for Rural Environment, Qingdao Agricultural University, Qingdao, 266109, China
| | - Dong Ma
- Qingdao Engineering Research Center for Rural Environment, Qingdao Agricultural University, Qingdao, 266109, China
| | - Chao Chai
- Qingdao Engineering Research Center for Rural Environment, Qingdao Agricultural University, Qingdao, 266109, China; Shandong Province Key Laboratory of Applied Mycology, Qingdao, 266109, China.
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24
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Bioremediation of PAH-Contaminated Soils: Process Enhancement through Composting/Compost. APPLIED SCIENCES-BASEL 2020. [DOI: 10.3390/app10113684] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Bioremediation of contaminated soils has gained increasing interest in recent years as a low-cost and environmentally friendly technology to clean soils polluted with anthropogenic contaminants. However, some organic pollutants in soil have a low biodegradability or are not bioavailable, which hampers the use of bioremediation for their removal. This is the case of polycyclic aromatic hydrocarbons (PAHs), which normally are stable and hydrophobic chemical structures. In this review, several approaches for the decontamination of PAH-polluted soil are presented and discussed in detail. The use of compost as biostimulation- and bioaugmentation-coupled technologies are described in detail, and some parameters, such as the stability of compost, deserve special attention to obtain better results. Composting as an ex situ technology, with the use of some specific products like surfactants, is also discussed. In summary, the use of compost and composting are promising technologies (in all the approaches presented) for the bioremediation of PAH-contaminated soils.
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25
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Deng B, Shi Y, Zhang L, Fang H, Gao Y, Luo L, Feng W, Hu X, Wan S, Huang W, Guo X, Siemann E. Effects of spent mushroom substrate-derived biochar on soil CO 2 and N 2O emissions depend on pyrolysis temperature. CHEMOSPHERE 2020; 246:125608. [PMID: 31884231 DOI: 10.1016/j.chemosphere.2019.125608] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2019] [Revised: 12/03/2019] [Accepted: 12/07/2019] [Indexed: 06/10/2023]
Abstract
Edible mushroom cultivation is an important industry in intensively managed forest understories. However, proper disposal of spent mushroom substrate (SMS) presents a challenge to its sustainable development. Biochar derived from SMS could be used to improve soil quality while providing a solution for SMS disposal. But SMS biochar pyrolyzed at different temperatures may alter carbon dioxide (CO2) and nitrous oxide (N2O) emissions associated with global warming, especially under the context of nitrogen (N) addition and warming. We conducted a factorial incubation study to examine greenhouse gas emissions and N transformations in moso bamboo forest soil amended with SMS-biochar (control vs. pyrolyzed at 300, 450 or 600 °C) in different N-addition (0 or 100 mg N kg-1 soil) and temperature (20, 25 or 30 °C) treatments. Pyrolysis temperature affected pH, C and N of SMS-biochars. N-transformations depended on the interaction of pyrolysis temperature, N-addition, and incubation temperature but were generally lower with 450 °C biochar addition. Soil N2O emissions increased with N-addition and they were more sensitive to incubation temperatures without biochar. Soil CO2 emissions increased with incubation temperature or biochar pyrolyzed at lower temperatures. Pyrolysis temperature might have regulated the effects of SMS-derived biochar on N2O emissions via changes in dissolved C, N, pH and associated changes in soil microbial community compositions. Because of the importance of sustainable development of this understory industry, amending soils with biochar produced at higher temperatures may be the best strategy for both the disposal of SMS and the mitigation of greenhouse gas emissions.
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Affiliation(s)
- Bangliang Deng
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China; Department of Entomology & Plant Pathology, North Carolina State University, Raleigh, 27695, USA
| | - Yanzhen Shi
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Ling Zhang
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China.
| | - Haifu Fang
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Yu Gao
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Laicong Luo
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Weixun Feng
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Xiaofei Hu
- School of Management, Nanchang University, Nanchang, Jiangxi, 330031, China
| | - Songze Wan
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Wei Huang
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Xiaomin Guo
- Key Laboratory of Silviculture, College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Evan Siemann
- Department of Biosciences, Rice University, Houston, 77005, USA
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26
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Bao H, Wang J, Zhang H, Li J, Li H, Wu F. Effects of biochar and organic substrates on biodegradation of polycyclic aromatic hydrocarbons and microbial community structure in PAHs-contaminated soils. JOURNAL OF HAZARDOUS MATERIALS 2020; 385:121595. [PMID: 31744730 DOI: 10.1016/j.jhazmat.2019.121595] [Citation(s) in RCA: 78] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2019] [Revised: 10/19/2019] [Accepted: 11/01/2019] [Indexed: 06/10/2023]
Abstract
A incubation experiment was conducted to investigate whether combined amendment of biochar (B) and compost (CP), mushroom residue (M) and corn straw (Y) could enhance biodegradation of polycyclic aromatic hydrocarbons (PAHs) in contaminated soils. After 77 days of incubation, both B + M and B + Y significantly (p < 0.01) increased removal rate of PAHs compared with amendment of biochar alone. However, B+CP resulted in a significant (p < 0.01) decreasing of PAHs removal. Compared with no biochar and no organic substrates addition (CK) and B, both B+M and B+Y significantly (p < 0.01) enhanced concentrations of dissolved organic carbon (DOC) and were favorable for the microbial growth reflected by microbial biomass carbons (MBC) and emission of carbon dioxide. Redundancy analysis (RDA) indicated that B + CP, B + M and B + Y separated the bacterial community compared with CK and B. However, the community composition structure in B + CP was different from that of B + M and B + Y. Moreover, the abundance of some PAHs degraders and PAH degradation genes predicted by PICRUSt software was promoted by B + M or B + Y, whereas that was inhibited under B + CP. The present study suggested that both B + M and B + Y could accelerate biodegradation of PAHs mainly through increasing the concentration of DOC and the abundances of microbial PAH degraders in soils.
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Affiliation(s)
- Huanyu Bao
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling 712100, Shaanxi, PR China; State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin 150090, PR China
| | - Jinfeng Wang
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling 712100, Shaanxi, PR China
| | - He Zhang
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling 712100, Shaanxi, PR China
| | - Jiao Li
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling 712100, Shaanxi, PR China
| | - Hui Li
- Guangdong Provincial Research Center for Environment Pollution Control and Remediation Materials, Department of Ecology, College of Life Science and Technology, Jinan University, Guangzhou 510632, PR China.
| | - Fuyong Wu
- College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agricultureand Rural Affairs, Yangling 712100, Shaanxi, PR China.
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27
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Zhuang M, Sanganyado E, Xu L, Zhu J, Li P, Liu W. High Throughput Sediment DNA Sequencing Reveals Azo Dye Degrading Bacteria Inhabit Nearshore Sediments. Microorganisms 2020; 8:microorganisms8020233. [PMID: 32050437 PMCID: PMC7074817 DOI: 10.3390/microorganisms8020233] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2020] [Revised: 02/06/2020] [Accepted: 02/07/2020] [Indexed: 11/24/2022] Open
Abstract
Estuaries and coastal environments are often regarded as a critical resource for the bioremediation of organic pollutants such as azo dyes due to their high abundance and diversity of extremophiles. Bioremediation through the activities of azoreductase, laccase, and other associated enzymes plays a critical role in the removal of azo dyes in built and natural environments. However, little is known about the biodegradation genes and azo dye degradation genes residing in sediments from coastal and estuarine environments. In this study, high-throughput sequencing (16S rRNA) of sediment DNA was used to explore the distribution of azo-dye degrading bacteria and their functional genes in estuaries and coastal environments. Unlike laccase genes, azoreductase (azoR), and naphthalene degrading genes were ubiquitous in the coastal and estuarine environments. The relative abundances of most functional genes were higher in the summer compared to winter at locations proximal to the mouths of the Hanjiang River and its distributaries. These results suggested inland river discharges influenced the occurrence and abundance of azo dye degrading genes in the nearshore environments. Furthermore, the azoR genes had a significant negative relationship with total organic carbon, Hg, and Cr (p < 0.05). This study provides critical insights into the biodegradation potential of indigenous microbial communities in nearshore environments and the influence of environmental factors on microbial structure, composition, and function which is essential for the development of technologies for bioremediation in azo dye contaminated sites.
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Affiliation(s)
- Mei Zhuang
- Guangdong Provincial Key Laboratory of Marine Biotechnology, Institute of Marine Science, Shantou University, Shantou 515063, China; (M.Z.); (L.X.); (P.L.)
| | - Edmond Sanganyado
- Guangdong Provincial Key Laboratory of Marine Biotechnology, Institute of Marine Science, Shantou University, Shantou 515063, China; (M.Z.); (L.X.); (P.L.)
- Correspondence: (E.S.); (W.L.)
| | - Liang Xu
- Guangdong Provincial Key Laboratory of Marine Biotechnology, Institute of Marine Science, Shantou University, Shantou 515063, China; (M.Z.); (L.X.); (P.L.)
| | - Jianming Zhu
- School of Marine Science and Technology, Harbin Institute of Technology at Weihai, Weihai 264209, China;
| | - Ping Li
- Guangdong Provincial Key Laboratory of Marine Biotechnology, Institute of Marine Science, Shantou University, Shantou 515063, China; (M.Z.); (L.X.); (P.L.)
| | - Wenhua Liu
- Guangdong Provincial Key Laboratory of Marine Biotechnology, Institute of Marine Science, Shantou University, Shantou 515063, China; (M.Z.); (L.X.); (P.L.)
- Correspondence: (E.S.); (W.L.)
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28
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Bao H, Wang J, Li J, Zhang H, Wu F. Effects of corn straw on dissipation of polycyclic aromatic hydrocarbons and potential application of backpropagation artificial neural network prediction model for PAHs bioremediation. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 186:109745. [PMID: 31606644 DOI: 10.1016/j.ecoenv.2019.109745] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2019] [Revised: 09/12/2019] [Accepted: 09/30/2019] [Indexed: 06/10/2023]
Abstract
In order to provide a viable option for remediation of PAHs-contaminated soils, a greenhouse experiment was conducted to assess the effect of corn straw amendment (1%, 2%, 4% or 6%, w/w) on dissipation of aged polycyclic aromatic hydrocarbons (PAHs) in contaminated soils. Backpropagation artificial neural network (BP-ANN) was applied to model the relationships between soil properties and PAHs concentration in soils. The removal rate of PAHs, enzyme activity (catalase and dehydrogenase), dissolved organic carbon (DOC) and microbial biomass carbon (MBC) in soils were investigated to evaluate the dissipation of PAHs under different ratio of corn straw amendment. The present study showed that corn straw amendment apparently accelerated the dissipation of PAHs after incubation of 112 days, especially under 4% and 6% treatments. Compared with non-amended soil, corn straw amendment significantly (p < 0.05) increased the removal rate of low molecular weight (LMW) PAHs and significantly (p < 0.05) enhanced the dissipation of high molecular weight (HMW) PAHs only under 6% treatment. Moreover, corn straw amendment increased activities of catalase and dehydrogenase, concentrations of DOC and MBC in soils, which are beneficial to the degradation of PAHs in soils. The performance of the BP-ANN model was assessed through the root mean square error (RMSE) and determination coefficient (R2). The results indicated that BP-ANN model could provide satisfactory prediction of PAHs concentration in soils during incubation period at R2 and RMSE values of 0.948, 187.4 μg kg-1, respectively. The results indicated that high amendment of corn straw was a potential option for remediation of PAHs-contaminated soils and that the BP-ANN model could successfully provide prompt prediction of PAHs concentration in soils.
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Affiliation(s)
- Huanyu Bao
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture and Rural Affairs, Yangling, 712100, Shaanxi, PR China
| | - Jinfeng Wang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture and Rural Affairs, Yangling, 712100, Shaanxi, PR China
| | - Jiao Li
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture and Rural Affairs, Yangling, 712100, Shaanxi, PR China
| | - He Zhang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture and Rural Affairs, Yangling, 712100, Shaanxi, PR China
| | - Fuyong Wu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture and Rural Affairs, Yangling, 712100, Shaanxi, PR China.
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Babu AG, Reja SI, Akhtar N, Sultana M, Deore PS, Ali FI. Bioremediation of Polycyclic Aromatic Hydrocarbons (PAHs): Current Practices and Outlook. MICROORGANISMS FOR SUSTAINABILITY 2019. [DOI: 10.1007/978-981-13-7462-3_9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Harmsen J, Rietra RPJJ. 25 years monitoring of PAHs and petroleum hydrocarbons biodegradation in soil. CHEMOSPHERE 2018; 207:229-238. [PMID: 29800823 DOI: 10.1016/j.chemosphere.2018.05.043] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2018] [Revised: 04/19/2018] [Accepted: 05/07/2018] [Indexed: 06/08/2023]
Abstract
Biodegradation of polycyclic aromatic hydrocarbons (PAHs) and total petroleum hydrocarbons (TPH) in sediment and soil has been monitored on seven experimental fields during periods up to 25 years. With this unique dataset, we investigated long-term very slow biodegradation under field conditions. . The data show that three biodegradation rates can be distinguished for PAHs: 1) rapid degradation during the first year, 2) slow degradation during the following 6 years and 3), subject of this paper, a very slow degradation after 7 years until at least 25 years. Beside 2-, 3- and 4-ring PAHs, also 5- and 6-ring PAHs (aromatic rings) were degraded, all at the same rate during very slow degradation. In the period of very slow degradation, 6% yr-1 of the PAHs present were removed in five fields and 2% yr-1 in two other fields, while in the same period no very slow degradation of TPH could be observed. The remaining petroleum hydrocarbons were high boiling and non-toxic. Using the calculated degradation rates and the independently measured bioavailability of the PAHs (Tenax-method), the PAHs degradation curves of all seven monitored fields could be modelled. Applying the model and data obtained with the Tenax-method for fresh contaminated material, results of long-term biodegradation can be predicted, which can support the use of bioremediation in order to obtain a legally acceptable residual concentration.
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Affiliation(s)
- Joop Harmsen
- Wageningen Environmental Research, P.O. Box 47, 6700 AA Wageningen, The Netherlands
| | - René P J J Rietra
- Wageningen Environmental Research, P.O. Box 47, 6700 AA Wageningen, The Netherlands.
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Cheng Y, Zang H, Wang H, Li D, Li C. Global transcriptomic analysis of Rhodococcus erythropolis D310-1 in responding to chlorimuron-ethyl. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2018; 157:111-120. [PMID: 29614448 DOI: 10.1016/j.ecoenv.2018.03.074] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2017] [Revised: 03/24/2018] [Accepted: 03/27/2018] [Indexed: 06/08/2023]
Abstract
Chlorimuron-ethyl is a typical long-term residual sulfonylurea herbicide whose long period of residence poses a serious hazard to rotational crops. Microbial degradation is considered to be the most acceptable method for its removal, but the degradation mechanism is not clear. In this work, we investigated gene expression changes during the degradation of chlorimuron-ethyl by an effective chlorimuron-ethyl-degrading bacterium, Rhodococcus erythropolis D310-1. The genes that correspond to this degradation and their mode of action were identified using RNA-Seq and qRT-PCR. The RNA-Seq results revealed that 500 genes were up-regulated during chlorimuron-ethyl degradation by strain D310-1. KEGG annotation showed that the dominant metabolic pathways were "Toluene degradation" and "Aminobenzoate degradation". Combining GO and KEGG classification with the relevant literature, we predicted that cytochrome P-450, carboxylesterase, and monooxygenase were involved in metabolic chlorimuron-ethyl biodegradation and that the enzyme active site and mode of action coincided with the degradation pathway proposed in our previous study. qRT-PCR experiments suggested that the R. erythropolis D310-1 carboxylesterase, cytochrome P-450 and glycosyltransferase genes were the key genes expressed during chlorimuron-ethyl biodegradation. To the best of our knowledge, this report is the first to describe the transcriptome analysis of a Rhodococcus species during the degradation of chlorimuron-ethyl.
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Affiliation(s)
- Yi Cheng
- College of Science, China Agricultural University, Beijing 100083, PR China
| | - Hailian Zang
- College of Resources and Environment, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Hailan Wang
- College of Resources and Environment, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Dapeng Li
- College of Resources and Environment, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Chunyan Li
- College of Resources and Environment, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China.
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Xue YN, Zhang JY, Tang S, Liu JK, Yue YB, Yang XH. Rapid degradation of unmanageable polycyclic aromatic hydrocarbons by a C-ZnO solid solution nanocatalyst. NEW J CHEM 2018. [DOI: 10.1039/c7nj04855f] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Unmanageable polycyclic aromatic hydrocarbons (PAHs) were rapidly degraded by a C atom-doped ZnO solid solution (C-ZnO SS) nanocatalyst due to the sucker effect.
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Affiliation(s)
- Ya-Nan Xue
- Key Laboratory for Advanced Materials
- School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai, 200237
- P. R. China
| | - Jing-Yu Zhang
- Key Laboratory for Advanced Materials
- School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai, 200237
- P. R. China
| | - Sheng Tang
- Shanghai Institute of Space Power-Sources
- Shanghai 200245
- P. R. China
| | - Jin-Ku Liu
- Key Laboratory for Advanced Materials
- School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai, 200237
- P. R. China
| | - Yun-Bo Yue
- Shanghai Institute of Space Power-Sources
- Shanghai 200245
- P. R. China
| | - Xiao-Hong Yang
- Department of Chemistry
- Chizhou University
- Chizhou, 247000
- P. R. China
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