1
|
Leech G, Melcher L, Chiu M, Nugent M, Juliano S, Burton L, Kang J, Kim SJ, Roy S, Farhadi L, Ross JL, Das M, Rust MJ, Robertson-Anderson RM. Programming scheduled self-assembly of circadian materials. Nat Commun 2025; 16:176. [PMID: 39747896 PMCID: PMC11696221 DOI: 10.1038/s41467-024-55645-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2024] [Accepted: 12/17/2024] [Indexed: 01/04/2025] Open
Abstract
Active biological molecules present a powerful, yet largely untapped, opportunity to impart autonomous regulation of materials. Because these systems can function robustly to regulate when and where chemical reactions occur, they have the ability to bring complex, life-like behavior to synthetic materials. Here, we achieve this design feat by using functionalized circadian clock proteins, KaiB and KaiC, to engineer time-dependent crosslinking of colloids. The resulting material self-assembles with programmable kinetics, producing macroscopic changes in material properties, via molecular assembly of KaiB-KaiC complexes. We show that colloid crosslinking depends strictly on the phosphorylation state of KaiC, with kinetics that are synced with KaiB-KaiC complexing. Our microscopic image analyses and computational models indicate that the stability of colloidal super-structures depends sensitively on the number of Kai complexes per colloid connection. Consistent with our model predictions, a high concentration stabilizes the material against dissolution after a robust self-assembly phase, while a low concentration allows for oscillatory material structure. This work introduces the concept of harnessing biological timers to control synthetic materials; and, more generally, opens the door to using protein-based reaction networks to endow synthetic systems with life-like functional properties.
Collapse
Affiliation(s)
- Gregor Leech
- Department of Physics and Biophysics, University of San Diego, San Diego, CA, USA
| | - Lauren Melcher
- School of Mathematical Sciences, Rochester Institute of Technology, Rochester, NY, USA
| | - Michelle Chiu
- Graduate Program in Biophysical Sciences, University of Chicago, Chicago, IL, USA
| | - Maya Nugent
- Department of Physics and Biophysics, University of San Diego, San Diego, CA, USA
| | - Shirlaine Juliano
- Department of Physics and Biophysics, University of San Diego, San Diego, CA, USA
| | - Lily Burton
- Department of Biochemistry and Molecular Biophysics, University of Chicago, Chicago, IL, USA
| | - Janet Kang
- Department of Molecular Genetics and Cell Biology and Department of Physics, University of Chicago, Chicago, IL, USA
| | - Soo Ji Kim
- Department of Biochemistry and Molecular Biophysics, University of Chicago, Chicago, IL, USA
| | - Sourav Roy
- Department of Physics, Syracuse University, Syracuse, NY, USA
| | - Leila Farhadi
- Department of Physics, Syracuse University, Syracuse, NY, USA
| | - Jennifer L Ross
- Department of Physics, Syracuse University, Syracuse, NY, USA
| | - Moumita Das
- School of Mathematical Sciences, Rochester Institute of Technology, Rochester, NY, USA
- School of Physics and Astronomy, Rochester Institute of Technology, Rochester, NY, USA
| | - Michael J Rust
- Department of Molecular Genetics and Cell Biology and Department of Physics, University of Chicago, Chicago, IL, USA
| | | |
Collapse
|
2
|
Navas SF, Klapp SHL. Discrete state model of a self-aggregating colloidal system with directional interactions. J Chem Phys 2024; 161:234903. [PMID: 39679522 DOI: 10.1063/5.0243978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2024] [Accepted: 12/02/2024] [Indexed: 12/17/2024] Open
Abstract
The construction of coarse-grained descriptions of a system's kinetics is well established in biophysics. One prominent example is Markov state models in protein folding dynamics. In this paper, we develop a coarse-grained, discrete state model of a self-aggregating colloidal particle system inspired by the concepts of Markov state modeling. The specific self-aggregating system studied here involves field-responsive colloidal particles in orthogonal electric and magnetic fields. Starting from particle-resolved (Brownian dynamics) simulations, we define the discrete states by categorizing each particle according to its local structure. We then describe the kinetics between these states as a series of stochastic, memoryless jumps. In contrast to other works on colloidal self-assembly, our coarse-grained approach describes the simultaneous formation and evolution of multiple aggregates from single particles. Our discrete model also takes into account the changes in transition dynamics between the discrete states as the size of the largest cluster grows. We validate the coarse-grained model by comparing the predicted population fraction in each of the discrete states with those calculated directly from the particle-resolved simulations as a function of the largest cluster size. We then predict population fractions in the presence of noise-averaging and in a situation where a model parameter is changed instantaneously after a certain time. Finally, we explore the validity of the detailed balance condition in the various stages of aggregation.
Collapse
Affiliation(s)
- Salman Fariz Navas
- Institute for Theoretical Physics, Technical University of Berlin, Hardenbergstr. 36, 10623 Berlin, Germany
| | - Sabine H L Klapp
- Institute for Theoretical Physics, Technical University of Berlin, Hardenbergstr. 36, 10623 Berlin, Germany
| |
Collapse
|
3
|
Löffler RJG, Gorecki J. Dynamics of Aggregation in Systems of Self-Propelled Rods. ENTROPY (BASEL, SWITZERLAND) 2024; 26:980. [PMID: 39593924 PMCID: PMC11593231 DOI: 10.3390/e26110980] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2024] [Revised: 11/06/2024] [Accepted: 11/12/2024] [Indexed: 11/28/2024]
Abstract
We highlight camphene-camphor-polypropylene plastic as a useful material for self-propelled objects that show aggregation while floating on a water surface. We consider self-propelled rods as an example of aggregation of objects characterized by non-trivial individual shapes with low-symmetry interactions between them. The motion of rods made of the camphene-camphor-polypropylene plastic is supported by dissipation of the surface-active molecules. The physical processes leading to aggregation and the mathematical model of the process are discussed. We analyze experimental data of aggregate formation dynamics and relate them to the system's properties. We speculate that the aggregate structure can be represented as a string of symbols, which opens the potential applicability of the phenomenon for information processing if objects floating on a water surface are regarded as reservoir computers.
Collapse
Affiliation(s)
- Richard J. G. Löffler
- Center for Star and Planet Formation, Globe Institute, University of Copenhagen, Øster Voldgade 5-7, 1350 Copenhagen, Denmark;
| | - Jerzy Gorecki
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| |
Collapse
|
4
|
Wang J, Wang G, Chen H, Liu Y, Wang P, Yuan D, Ma X, Xu X, Cheng Z, Ji B, Yang M, Shuai J, Ye F, Wang J, Jiao Y, Liu L. Robo-Matter towards reconfigurable multifunctional smart materials. Nat Commun 2024; 15:8853. [PMID: 39402043 PMCID: PMC11473820 DOI: 10.1038/s41467-024-53123-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Accepted: 09/27/2024] [Indexed: 10/17/2024] Open
Abstract
Maximizing materials utilization efficiency via enhancing their reconfigurability and multifunctionality offers a promising avenue in addressing the global challenges in sustainability. To this end, significant efforts have been made in developing reconfigurable multifunctional smart materials, which can exhibit remarkable behaviors such as morphing and self-healing. However, the difficulty in efficiently manipulating and controlling matter at the building block level with manageable cost and complexity, which is crucial to achieving superior responsiveness to environmental clues and stimuli, has significantly hindered the further development of such smart materials. Here we introduce a concept of Robo-Matter, which can be activated and controlled through external information exchange at the building block level, to enable a high-level of controllability, mutability and versatility for reconfigurable multifunctional smart materials. Using specially designed micro-robot building blocks with symmetry-breaking active motion modes, tunable anisotropic interactions, and interactive coupling with a programmable spatial-temporal dynamic light field, we demonstrate an emergent Robot-Matter duality, which enables a spectrum of desirable behaviors spanning from matter-like properties such as ultra-fast self-assembly and adaptivity, to robot-like properties including active force output, smart healing, smart morphing and infiltration. Our work demonstrates a promising direction for designing next-generation smart materials and large-scale robotic swarms.
Collapse
Affiliation(s)
- Jing Wang
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
- School of Physical Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Gao Wang
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
- School of Physical Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Huaicheng Chen
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
| | - Yanping Liu
- College of Physics, Chongqing University, Chongqing, 401331, China
| | - Peilong Wang
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
| | - Daming Yuan
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
| | - Xingyu Ma
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
| | - Xiangyu Xu
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
| | - Zhengdong Cheng
- College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, 310058, Zhejiang, China
| | - Baohua Ji
- Institute of Biomechanics and Applications, Department of Engineering Mechanics, Zhejiang University, Hangzhou, 310027, Zhejiang, China
| | - Mingcheng Yang
- School of Physical Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China
- Beijing National Laboratory for Condensed Matter Physics and Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing, 100190, China
| | - Jianwei Shuai
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
| | - Fangfu Ye
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
- School of Physical Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China
- Beijing National Laboratory for Condensed Matter Physics and Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing, 100190, China
| | - Jin Wang
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, 325001, Zhejiang, China
- Department of Chemistry, Physics and Applied Mathematics, State University of New York at Stony Brook, New York, 11794-3400, NY, USA
| | - Yang Jiao
- Materials Science and Engineering, Arizona State University, Tempe, 85287, AZ, USA.
- Department of Physics, Arizona State University, Tempe, 85287, AZ, USA.
| | - Liyu Liu
- College of Physics, Chongqing University, Chongqing, 401331, China.
| |
Collapse
|
5
|
Rivera-Yoshida N, Arzola AV, Benítez M. Unravelling a diversity of cellular structures and aggregation dynamics during the early development of Myxococcus xanthus. Biol Lett 2024; 20:20240360. [PMID: 39439355 PMCID: PMC11496945 DOI: 10.1098/rsbl.2024.0360] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2024] [Revised: 08/21/2024] [Accepted: 09/17/2024] [Indexed: 10/25/2024] Open
Abstract
Aggregation underlies the collective dynamics of a diversity of organisms, enabling the formation of complex structures and emergent behaviours on interaction with the environment. Cellular aggregation constitutes one of the routes to collective motility and multicellular development. Myxococcus xanthus, a social bacterium, is a valuable model for studying the aggregative path to multicellularity, a major transition in the evolutionary history of life. While the collective developmental behaviour of M. xanthus has been largely studied in high cellular densities, there is a lack of understanding at low-density conditions that can be ecologically relevant. In this work, we study the early stages of emergent collective behaviour of M. xanthus under nutrient-poor and low-density conditions, uncovering the formation of diverse cellular structures with different shapes and sizes, ranging from individual cells to networks comprising thousands of cells. We study their motility patterns and their prevalence along development and discuss their cross-scale role on the population's exploratory dynamics. This work contributes to understanding key, yet largely understudied, aspects in the early stages of multicellular development in myxobacteria, shedding light on the dynamics underlying aggregative processes in this and other taxa and study systems.
Collapse
Affiliation(s)
- Natsuko Rivera-Yoshida
- Laboratorio Nacional de Ciencias de la Sostenibilidad, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de MéxicoC.P. 04350, Mexico
| | - Alejandro V. Arzola
- Departamento de Física Cuántica y Fotónica, Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de MéxicoC.P. 04350, Mexico
| | - Mariana Benítez
- Laboratorio Nacional de Ciencias de la Sostenibilidad, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de MéxicoC.P. 04350, Mexico
| |
Collapse
|
6
|
Zhang X, Liu X, Liu Q, Feng Y, Qiu S, Wang T, Xu H, Li H, Yin L, Kang H, Fan Z. Reversible Constrained Dissociation and Reassembly of MXene Films. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2309171. [PMID: 38582527 PMCID: PMC11186054 DOI: 10.1002/advs.202309171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Revised: 02/08/2024] [Indexed: 04/08/2024]
Abstract
Enabling materials to undergo reversible dynamic transformations akin to the behaviors of living organisms represents a critical challenge in the field of material assembly. The pursuit of such capabilities using conventional materials has largely been met with limited success. Herein, the discovery of reversible constrained dissociation and reconfiguration in MXene films, offering an effective solution to overcome this obstacle is reported. Specifically, MXene films permit rapid intercalation of water molecules between their distinctive layers, resulting in a significant expansion and exhibiting confined dissociation within constrained spaces. Meanwhile, the process of capillary compression driven by water evaporation reinstates the dissociated MXene film to its original compact state. Further, the adhesive properties emerging from the confined disassociation of MXene films can spontaneously induce fusion between separate films. Utilizing this attribute, complex structures of MXene films can be effortlessly foamed and interlayer porosity precisely controlled, using only water as the inducer. Additionally, a parallel phenomenon has been identified in graphene oxide films. This work not only provides fresh insights into the microscopic mechanisms of 2D materials such as MXene but also paves a transformative path for their macroscopic assembly applications in the future.
Collapse
Affiliation(s)
- Xuefeng Zhang
- School of chemistry and Materials EngineeringGuangdong Provincial Key Laboratory for Electronic Functional Materials and DevicesHuizhou UniversityHuizhou516007China
| | - Xudong Liu
- School of Materials Science and EngineeringHarbin Institute of TechnologyHarbin150001China
| | - Qingqiang Liu
- School of chemistry and Materials EngineeringGuangdong Provincial Key Laboratory for Electronic Functional Materials and DevicesHuizhou UniversityHuizhou516007China
| | - Yufa Feng
- School of chemistry and Materials EngineeringGuangdong Provincial Key Laboratory for Electronic Functional Materials and DevicesHuizhou UniversityHuizhou516007China
| | - Si Qiu
- School of chemistry and Materials EngineeringGuangdong Provincial Key Laboratory for Electronic Functional Materials and DevicesHuizhou UniversityHuizhou516007China
| | - Ting Wang
- School of chemistry and Materials EngineeringGuangdong Provincial Key Laboratory for Electronic Functional Materials and DevicesHuizhou UniversityHuizhou516007China
| | - Huayu Xu
- School of chemistry and Materials EngineeringGuangdong Provincial Key Laboratory for Electronic Functional Materials and DevicesHuizhou UniversityHuizhou516007China
| | - Hao Li
- School of chemistry and Materials EngineeringGuangdong Provincial Key Laboratory for Electronic Functional Materials and DevicesHuizhou UniversityHuizhou516007China
| | - Liang Yin
- MIIT Key Laboratory of Critical Materials Technology for New Energy Conversion and StorageSchool of Chemistry and Chemical EngineeringHarbin Institute of TechnologyHarbin150001China
| | - Hui Kang
- Advanced Materials ThrustThe Hong Kong University of Science and Technology (Guangzhou)Guangzhou510000China
| | - Zhimin Fan
- School of Materials Science and EngineeringHarbin Institute of TechnologyHarbin150001China
- MIIT Key Laboratory of Critical Materials Technology for New Energy Conversion and StorageSchool of Chemistry and Chemical EngineeringHarbin Institute of TechnologyHarbin150001China
| |
Collapse
|
7
|
Abdelrahman MK, Wagner RJ, Kalairaj MS, Zadan M, Kim MH, Jang LK, Wang S, Javed M, Dana A, Singh KA, Hargett SE, Gaharwar AK, Majidi C, Vernerey FJ, Ware TH. Material assembly from collective action of shape-changing polymers. NATURE MATERIALS 2024; 23:281-289. [PMID: 38177377 DOI: 10.1038/s41563-023-01761-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Accepted: 11/14/2023] [Indexed: 01/06/2024]
Abstract
Some animals form transient, responsive and solid-like ensembles through dynamic structural interactions. These ensembles demonstrate emergent responses such as spontaneous self-assembly, which are difficult to achieve in synthetic soft matter. Here we use shape-morphing units comprising responsive polymers to create solids that self-assemble, modulate their volume and disassemble on demand. The ensemble is composed of a responsive hydrogel, liquid crystal elastomer or semicrystalline polymer ribbons that reversibly bend or twist. The dispersions of these ribbons mechanically interlock, inducing reversible aggregation. The aggregated liquid crystal elastomer ribbons have a 12-fold increase in the yield stress compared with cooled dispersion and contract by 34% on heating. Ribbon type, concentration and shape dictate the aggregation and govern the global mechanical properties of the solid that forms. Coating liquid crystal elastomer ribbons with a liquid metal begets photoresponsive and electrically conductive aggregates, whereas seeding cells on hydrogel ribbons enables self-assembling three-dimensional scaffolds, providing a versatile platform for the design of dynamic materials.
Collapse
Affiliation(s)
- Mustafa K Abdelrahman
- Department of Materials Science and Engineering, Texas A&M University, College Station, TX, USA
| | - Robert J Wagner
- Mechanical Engineering Department, Materials Science and Engineering Program, University of Colorado, Boulder, CO, USA
- Department of Mechanical and Aerospace Engineering, Cornell University, Ithaca, NY, USA
| | | | - Mason Zadan
- Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA, USA
| | - Min Hee Kim
- Department of Biomedical Engineering, Texas A&M University, College Station, TX, USA
| | - Lindy K Jang
- Department of Biomedical Engineering, Texas A&M University, College Station, TX, USA
- Materials Engineering Division, Lawrence Livermore National Laboratory, Livermore, CA, USA
| | - Suitu Wang
- Department of Materials Science and Engineering, Texas A&M University, College Station, TX, USA
| | - Mahjabeen Javed
- Department of Biomedical Engineering, Texas A&M University, College Station, TX, USA
| | - Asaf Dana
- Department of Biomedical Engineering, Texas A&M University, College Station, TX, USA
| | - Kanwar Abhay Singh
- Department of Biomedical Engineering, Texas A&M University, College Station, TX, USA
| | - Sarah E Hargett
- Department of Biomedical Engineering, Texas A&M University, College Station, TX, USA
| | - Akhilesh K Gaharwar
- Department of Biomedical Engineering, Texas A&M University, College Station, TX, USA
| | - Carmel Majidi
- Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA, USA
| | - Franck J Vernerey
- Mechanical Engineering Department, Materials Science and Engineering Program, University of Colorado, Boulder, CO, USA
| | - Taylor H Ware
- Department of Materials Science and Engineering, Texas A&M University, College Station, TX, USA.
- Department of Biomedical Engineering, Texas A&M University, College Station, TX, USA.
| |
Collapse
|
8
|
Muratore IB, Garnier S. Ontogeny of collective behaviour. Philos Trans R Soc Lond B Biol Sci 2023; 378:20220065. [PMID: 36802780 PMCID: PMC9939274 DOI: 10.1098/rstb.2022.0065] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2022] [Accepted: 10/21/2022] [Indexed: 02/21/2023] Open
Abstract
During their lifetime, superorganisms, like unitary organisms, undergo transformations that change the machinery of their collective behaviour. Here, we suggest that these transformations are largely understudied and propose that more systematic research into the ontogeny of collective behaviours is needed if we hope to better understand the link between proximate behavioural mechanisms and the development of collective adaptive functions. In particular, certain social insects engage in self-assemblage, forming dynamic and physically connected architectures with striking similarities to developing multicellular organisms, making them good model systems for ontogenetic studies of collective behaviour. However, exhaustive time series and three-dimensional data are required to thoroughly characterize the different life stages of the collective structures and the transitions between these stages. The well-established fields of embryology and developmental biology offer practical tools and theoretical frameworks that could speed up the acquisition of new knowledge about the formation, development, maturity and dissolution of social insect self-assemblages and, by extension, other superorganismal behaviours. We hope that this review will encourage an expansion of the ontogenetic perspective in the field of collective behaviour and, in particular, in self-assemblage research, which has far-reaching applications in robotics, computer science and regenerative medicine. This article is part of a discussion meeting issue 'Collective behaviour through time'.
Collapse
Affiliation(s)
| | - Simon Garnier
- Department of Biological Sciences, New Jersey Institute of Technology, Newark, NJ 07102, USA
| |
Collapse
|
9
|
Han K. Electric and Magnetic Field-Driven Dynamic Structuring for Smart Functional Devices. MICROMACHINES 2023; 14:661. [PMID: 36985068 PMCID: PMC10057767 DOI: 10.3390/mi14030661] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 03/11/2023] [Accepted: 03/14/2023] [Indexed: 06/18/2023]
Abstract
The field of soft matter is rapidly growing and pushing the limits of conventional materials science and engineering. Soft matter refers to materials that are easily deformed by thermal fluctuations and external forces, allowing for better adaptation and interaction with the environment. This has opened up opportunities for applications such as stretchable electronics, soft robotics, and microfluidics. In particular, soft matter plays a crucial role in microfluidics, where viscous forces at the microscale pose a challenge to controlling dynamic material behavior and operating functional devices. Field-driven active colloidal systems are a promising model system for building smart functional devices, where dispersed colloidal particles can be activated and controlled by external fields such as magnetic and electric fields. This review focuses on building smart functional devices from field-driven collective patterns, specifically the dynamic structuring of hierarchically ordered structures. These structures self-organize from colloidal building blocks and exhibit reconfigurable collective patterns that can implement smart functions such as shape shifting and self-healing. The review clarifies the basic mechanisms of field-driven particle dynamic behaviors and how particle-particle interactions determine the collective patterns of dynamic structures. Finally, the review concludes by highlighting representative application areas and future directions.
Collapse
Affiliation(s)
- Koohee Han
- Department of Chemical Engineering, Kyungpook National University, Daegu 41566, Republic of Korea
| |
Collapse
|
10
|
Shukla AK, Mitra S, Dhakar S, Maiti A, Sharma S, Dey KK. Electrochemical Energy Harvesting Using Microbial Active Matter. ACS APPLIED BIO MATERIALS 2023; 6:117-125. [PMID: 36503255 DOI: 10.1021/acsabm.2c00785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
With the continuous growth in world population and economy, the global energy demand is increasing rapidly. Given that non-renewable energy sources will eventually deplete, there is increasing need for clean, alternative renewable energy sources, which will be inexpensive and involve minimum risk of environmental pollution. In this paper, harnessing the activity of cupric reductase NDH-2 enzyme present in Escherichia coli bacterial cells, we demonstrate a simple and efficient energy harvesting strategy within an electrochemical chamber without the requirement of any external fuels or force fields. The transduction of energy has been demonstrated with various strains of E. coli, indicating that this strategy could, in principle, be applicable for other microbial catalytic systems. We offer a simple mechanism of the energy transduction process considering the bacterial enzyme-mediated redox reaction occurring over the working electrode of the electrochemical cell. Also, the amount of energy generated has been found to be depending on the motility of bacteria within the experimental chamber, suggesting possible opportunities for developing microbial motility-controlled small scale power generators. Finally, we show that the Faradaic electrochemical energy harvested is large enough to power a commercial light emitting diode connected to an amplifier circuit. We expect the present study to generate sufficient interest within soft condensed matter and biophysics communities, and offer useful platforms for controlled energy generation at the small scales.
Collapse
Affiliation(s)
- Ashish K Shukla
- Laboratory of Soft and Living Materials, Discipline of Physics, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar382055, India
| | - Shirsendu Mitra
- Laboratory of Soft and Living Materials, Discipline of Physics, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar382055, India
| | - Shikha Dhakar
- Discipline of Chemistry, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar382055, India
| | - Arnab Maiti
- Laboratory of Soft and Living Materials, Discipline of Physics, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar382055, India
| | - Sudhanshu Sharma
- Discipline of Chemistry, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar382055, India
| | - Krishna K Dey
- Laboratory of Soft and Living Materials, Discipline of Physics, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar382055, India
| |
Collapse
|
11
|
Geiß D, Kroy K, Holubec V. Signal propagation and linear response in the delay Vicsek model. Phys Rev E 2022; 106:054612. [PMID: 36559364 DOI: 10.1103/physreve.106.054612] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Accepted: 11/01/2022] [Indexed: 06/17/2023]
Abstract
Retardation between sensation and action is an inherent biological trait. Here we study its effect in the Vicsek model, which is a paradigmatic swarm model. We find that (1) a discrete time delay in the orientational interactions diminishes the ability of strongly aligned swarms to follow a leader and, in return, increases their stability against random orientation fluctuations; (2) both longer delays and higher speeds favor ballistic over diffusive spreading of information (orientation) through the swarm; (3) for short delays, the mean change in the total orientation (the order parameter) scales linearly in a small orientational bias of the leaders and inversely in the delay time, while its variance first increases and then saturates with increasing delays; and (4) the linear response breaks down when orientation conservation is broken.
Collapse
Affiliation(s)
- Daniel Geiß
- Institute for Theoretical Physics, University of Leipzig, 04103 Leipzig, Germany
- Max Planck Institute for Mathematics in the Sciences, 04103 Leipzig, Germany
| | - Klaus Kroy
- Institute for Theoretical Physics, University of Leipzig, 04103 Leipzig, Germany
| | - Viktor Holubec
- Faculty of Mathematics and Physics, Charles University, CZ-180 00 Prague, Czech Republic
| |
Collapse
|
12
|
Strength-mass scaling law governs mass distribution inside honey bee swarms. Sci Rep 2022; 12:17388. [PMID: 36253489 PMCID: PMC9576786 DOI: 10.1038/s41598-022-21347-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Accepted: 09/26/2022] [Indexed: 01/10/2023] Open
Abstract
To survive during colony reproduction, bees create dense clusters of thousands of suspended individuals. How does this swarm, which is orders of magnitude larger than the size of an individual, maintain mechanical stability? We hypothesize that the internal structure in the bulk of the swarm, about which there is little prior information, plays a key role in mechanical stability. Here, we provide the first-ever 3D reconstructions of the positions of the bees in the bulk of the swarm using x-ray computed tomography. We find that the mass of bees in a layer decreases with distance from the attachment surface. By quantifying the distribution of bees within swarms varying in size (made up of 4000-10,000 bees), we find that the same power law governs the smallest and largest swarms, with the weight supported by each layer scaling with the mass of each layer to the [Formula: see text] power. This arrangement ensures that each layer exerts the same fraction of its total strength, and on average a bee supports a lower weight than its maximum grip strength. This illustrates the extension of the scaling law relating weight to strength of single organisms to the weight distribution within a superorganism made up of thousands of individuals.
Collapse
|
13
|
Geiß D, Kroy K, Holubec V. Information conduction and convection in noiseless Vicsek flocks. Phys Rev E 2022; 106:014609. [PMID: 35974505 DOI: 10.1103/physreve.106.014609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Accepted: 06/30/2022] [Indexed: 06/15/2023]
Abstract
Physical interactions generally respect certain symmetries, such as reciprocity and energy conservation, which survive in coarse-grained isothermal descriptions. Active many-body systems usually break such symmetries intrinsically, on the particle level, so that their collective behavior is often more naturally interpreted as a result of information exchange. Here we study numerically how information spreads from a "leader" particle through an initially aligned flock, described by the Vicsek model without noise. In the low-speed limit of a static spin lattice, we find purely conductive spreading, reminiscent of heat transfer. Swarm motility and heterogeneity can break reciprocity and spin conservation. But what seems more consequential for the swarm response is that the dispersion relation acquires a significant convective contribution along the leader's direction of motion.
Collapse
Affiliation(s)
- Daniel Geiß
- Institut für Theoretische Physik, Universität Leipzig, Postfach 100 920, D-04009 Leipzig, Germany
- Max Planck Institute for Mathematics in the Sciences, D-04103 Leipzig, Germany
| | - Klaus Kroy
- Institut für Theoretische Physik, Universität Leipzig, Postfach 100 920, D-04009 Leipzig, Germany
| | - Viktor Holubec
- Charles University, Faculty of Mathematics and Physics, Department of Macromolecular Physics, V Holešovičkách 2, CZ-180 00 Praha, Czech Republic
| |
Collapse
|
14
|
Wagner RJ, Vernerey FJ. Computational exploration of treadmilling and protrusion growth observed in fire ant rafts. PLoS Comput Biol 2022; 18:e1009869. [PMID: 35176019 PMCID: PMC8890740 DOI: 10.1371/journal.pcbi.1009869] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 03/02/2022] [Accepted: 01/26/2022] [Indexed: 11/20/2022] Open
Abstract
Collective living systems regularly achieve cooperative emergent functions that individual organisms could not accomplish alone. The rafts of fire ants (Solenopsis invicta) are often studied in this context for their ability to create aggregated structures comprised entirely of their own bodies, including tether-like protrusions that facilitate exploration of and escape from flooded environments. While similar protrusions are observed in cytoskeletons and cellular aggregates, they are generally dependent on morphogens or external gradients leaving the isolated role of local interactions poorly understood. Here we demonstrate through an ant-inspired, agent-based numerical model how protrusions in ant rafts may emerge spontaneously due to local interactions. The model is comprised of a condensed structural network of agents that represents the monolayer of interconnected worker ants, which floats on the water and gives ant rafts their form. Experimentally, this layer perpetually contracts, which we capture through the pairwise contraction of all neighboring structural agents at a strain rate of [Formula: see text]. On top of the structural layer, we model a dispersed, on-lattice layer of motile agents that represents free ants, which walk on top of the floating network. Experimentally, these self-propelled free ants walk with some mean persistence length and speed that we capture through an ant-inspired phenomenological model. Local interactions occur between neighboring free ants within some radius of detection, R, and the persistence length of freely active agents is tuned through a noise parameter, η as introduced by the Vicsek model. Both R and η where fixed to match the experimental trajectories of free ants. Treadmilling of the raft occurs as agents transition between the structural and free layers in accordance with experimental observations. Ultimately, we demonstrate how phases of exploratory protrusion growth may be induced by increased ant activity as characterized by a dimensionless parameter, [Formula: see text]. These results provide an example in which functional morphogenesis of a living system may emerge purely from local interactions at the constituent length scale, thereby providing a source of inspiration for the development of decentralized, autonomous active matter and swarm robotics.
Collapse
Affiliation(s)
- Robert J. Wagner
- University of Colorado, U.S. Mechanical Engineering Department, Material Science and Engineering Program, Boulder, Colorado, United State of America
| | - Franck J. Vernerey
- University of Colorado, U.S. Mechanical Engineering Department, Material Science and Engineering Program, Boulder, Colorado, United State of America
| |
Collapse
|
15
|
Abstract
Colloidal self-assembly refers to a solution-processed assembly of nanometer-/micrometer-sized, well-dispersed particles into secondary structures, whose collective properties are controlled by not only nanoparticle property but also the superstructure symmetry, orientation, phase, and dimension. This combination of characteristics makes colloidal superstructures highly susceptible to remote stimuli or local environmental changes, representing a prominent platform for developing stimuli-responsive materials and smart devices. Chemists are achieving even more delicate control over their active responses to various practical stimuli, setting the stage ready for fully exploiting the potential of this unique set of materials. This review addresses the assembly of colloids into stimuli-responsive or smart nanostructured materials. We first delineate the colloidal self-assembly driven by forces of different length scales. A set of concepts and equations are outlined for controlling the colloidal crystal growth, appreciating the importance of particle connectivity in creating responsive superstructures. We then present working mechanisms and practical strategies for engineering smart colloidal assemblies. The concepts underpinning separation and connectivity control are systematically introduced, allowing active tuning and precise prediction of the colloidal crystal properties in response to external stimuli. Various exciting applications of these unique materials are summarized with a specific focus on the structure-property correlation in smart materials and functional devices. We conclude this review with a summary of existing challenges in colloidal self-assembly of smart materials and provide a perspective on their further advances to the next generation.
Collapse
Affiliation(s)
- Zhiwei Li
- Department of Chemistry, University of California, Riverside, California 92521, United States
| | - Qingsong Fan
- Department of Chemistry, University of California, Riverside, California 92521, United States
| | - Yadong Yin
- Department of Chemistry, University of California, Riverside, California 92521, United States
| |
Collapse
|
16
|
Wagner RJ, Such K, Hobbs E, Vernerey FJ. Treadmilling and dynamic protrusions in fire ant rafts. J R Soc Interface 2021; 18:20210213. [PMID: 34186017 PMCID: PMC8241487 DOI: 10.1098/rsif.2021.0213] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Accepted: 06/09/2021] [Indexed: 11/18/2022] Open
Abstract
Fire ants (Solenopsis invicta) are exemplary for their formation of cohered, buoyant and dynamic structures composed entirely of their own bodies when exposed to flooded environments. Here, we observe tether-like protrusions that emerge from aggregated fire ant rafts when docked to stationary, vertical rods. Ant rafts comprise a floating, structural network of interconnected ants on which a layer of freely active ants walk. We show here that sustained shape evolution is permitted by the competing mechanisms of perpetual raft contraction aided by the transition of bulk structural ants to the free active layer and outward raft expansion owing to the deposition of free ants into the structural network at the edges, culminating in global treadmilling. Furthermore, we see that protrusions emerge as a result of asymmetries in the edge deposition rate of free ants. Employing both experimental characterization and a model for self-propelled particles in strong confinement, we interpret that these asymmetries are likely to occur stochastically owing to wall accumulation effects and directional motion of active ants when strongly confined by the protrusions' relatively narrow boundaries. Together, these effects may realize the cooperative, yet spontaneous formation of protrusions that fire ants sometimes use for functional exploration and to escape flooded environments.
Collapse
Affiliation(s)
- Robert J. Wagner
- Mechanical Engineering Department, Material Science and Engineering Program, University of Colorado, Boulder, CO 80309 USA
| | - Kristen Such
- Mechanical Engineering Department, University of Colorado, Boulder, CO 80309 USA
| | - Ethan Hobbs
- Computer Science Department, Interdisciplinary Quantitative Biology Program, University of Colorado, Boulder, CO 80309 USA
| | - Franck J. Vernerey
- Mechanical Engineering Department, Material Science and Engineering Program, University of Colorado, Boulder, CO 80309 USA
| |
Collapse
|
17
|
Lavrentovich OD. Design of nematic liquid crystals to control microscale dynamics. LIQUID CRYSTALS REVIEWS 2021; 8:59-129. [PMID: 34956738 PMCID: PMC8698256 DOI: 10.1080/21680396.2021.1919576] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Accepted: 04/11/2021] [Indexed: 05/25/2023]
Abstract
The dynamics of small particles, both living such as swimming bacteria and inanimate, such as colloidal spheres, has fascinated scientists for centuries. If one could learn how to control and streamline their chaotic motion, that would open technological opportunities in the transformation of stored or environmental energy into systematic motion, with applications in micro-robotics, transport of matter, guided morphogenesis. This review presents an approach to command microscale dynamics by replacing an isotropic medium with a liquid crystal. Orientational order and associated properties, such as elasticity, surface anchoring, and bulk anisotropy, enable new dynamic effects, ranging from the appearance and propagation of particle-like solitary waves to self-locomotion of an active droplet. By using photoalignment, the liquid crystal can be patterned into predesigned structures. In the presence of the electric field, these patterns enable the transport of solid and fluid particles through nonlinear electrokinetics rooted in anisotropy of conductivity and permittivity. Director patterns command the dynamics of swimming bacteria, guiding their trajectories, polarity of swimming, and distribution in space. This guidance is of a higher level of complexity than a simple following of the director by rod-like microorganisms. Namely, the director gradients mediate hydrodynamic interactions of bacteria to produce an active force and collective polar modes of swimming. The patterned director could also be engraved in a liquid crystal elastomer. When an elastomer coating is activated by heat or light, these patterns produce a deterministic surface topography. The director gradients define an activation force that shapes the elastomer in a manner similar to the active stresses triggering flows in active nematics. The patterned elastomer substrates could be used to define the orientation of cells in living tissues. The liquid-crystal guidance holds a major promise in achieving the goal of commanding microscale active flows.
Collapse
Affiliation(s)
- Oleg D Lavrentovich
- Advanced Materials and Liquid Crystal Institute, Department of Physics, Materials Science Graduate Program, Kent State University, Kent, OH 44242, USA
| |
Collapse
|
18
|
Sheng Z, Zhang M, Liu J, Malgaretti P, Li J, Wang S, Lv W, Zhang R, Fan Y, Zhang Y, Chen X, Hou X. Reconfiguring confined magnetic colloids with tunable fluid transport behavior. Natl Sci Rev 2021; 8:nwaa301. [PMID: 34691643 PMCID: PMC8352900 DOI: 10.1093/nsr/nwaa301] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Revised: 12/01/2020] [Accepted: 12/07/2020] [Indexed: 12/19/2022] Open
Abstract
Collective dynamics of confined colloids are crucial in diverse scenarios such as self-assembly and phase behavior in materials science, microrobot swarms for drug delivery and microfluidic control. Yet, fine-tuning the dynamics of colloids in microscale confined spaces is still a formidable task due to the complexity of the dynamics of colloidal suspension and to the lack of methodology to probe colloids in confinement. Here, we show that the collective dynamics of confined magnetic colloids can be finely tuned by external magnetic fields. In particular, the mechanical properties of the confined colloidal suspension can be probed in real time and this strategy can be also used to tune microscale fluid transport. Our experimental and theoretical investigations reveal that the collective configuration characterized by the colloidal entropy is controlled by the colloidal concentration, confining ratio and external field strength and direction. Indeed, our results show that mechanical properties of the colloidal suspension as well as the transport of the solvent in microfluidic devices can be controlled upon tuning the entropy of the colloidal suspension. Our approach opens new avenues for the design and application of drug delivery, microfluidic logic, dynamic fluid control, chemical reaction and beyond.
Collapse
Affiliation(s)
- Zhizhi Sheng
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
- Collaborative Innovation Center of Chemistry for Energy Materials, Xiamen University, Xiamen 361005, China
| | - Mengchuang Zhang
- Department of Physics, Research Institute for Biomimetics and Soft Matter, Fujian Provincial Key Laboratory for Soft Functional Materials Research, Jiujiang Research Institute, College of Physical Science and Technology, Xiamen University, Xiamen 361005, China
| | - Jing Liu
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Paolo Malgaretti
- Max Planck Institute for Intelligent Systems, Stuttgart 70569, Germany
- IV Institute for Theoretical Physics, University of Stuttgart, Stuttgart 70049, Germany
| | - Jianyu Li
- Department of Mechanical Engineering, McGill University, Montreal H3A 0G4, Canada
- Department of Biomedical Engineering, McGill University, Montreal H3A 0G4, Canada
| | - Shuli Wang
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
- Collaborative Innovation Center of Chemistry for Energy Materials, Xiamen University, Xiamen 361005, China
| | - Wei Lv
- Department of Physics, Research Institute for Biomimetics and Soft Matter, Fujian Provincial Key Laboratory for Soft Functional Materials Research, Jiujiang Research Institute, College of Physical Science and Technology, Xiamen University, Xiamen 361005, China
| | - Rongrong Zhang
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Yi Fan
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Yunmao Zhang
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Xinyu Chen
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Xu Hou
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
- Collaborative Innovation Center of Chemistry for Energy Materials, Xiamen University, Xiamen 361005, China
- Department of Physics, Research Institute for Biomimetics and Soft Matter, Fujian Provincial Key Laboratory for Soft Functional Materials Research, Jiujiang Research Institute, College of Physical Science and Technology, Xiamen University, Xiamen 361005, China
- Tan Kah KeeInnovation Laboratory, Xiamen 361102, China
| |
Collapse
|
19
|
Elismaili M, Bécu L, Xu H, Gonzalez-Rodriguez D. Dissipative non-equilibrium dynamics of self-assembled paramagnetic colloidal clusters. SOFT MATTER 2021; 17:3234-3241. [PMID: 33624661 DOI: 10.1039/d0sm02218g] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
We study experimentally and theoretically the dynamics of two-dimensional clusters of paramagnetic colloids under a time-varying magnetic field. These self-assembled clusters are a dissipative non-equilibrium system with shared features with aggregates of living matter. We investigate the dynamics of cluster rotation and develop a theoretical model to explain the emergence of collective viscoelastic properties. The model successfully captures the observed dependence on particle, cluster, and field characteristics, and it provides an estimate of cluster viscoelasticity. We also study the rapid cluster disassembly in response to a change in the external field. The experimentally observed disassembly dynamics are successfully described by a model, which also allows estimating the particle-substrate friction coefficient. Our study highlights physical mechanisms that may be at play in biological aggregates, where similar dynamical behaviors are observed.
Collapse
|
20
|
Joshi G, Okeyoshi K, Adila Amat Yusof F, Mitsumata T, Okajima MK, Kaneko T. Interfacial self-assembly of polysaccharide rods and platelets bridging over capillary lengths. J Colloid Interface Sci 2021; 591:483-489. [PMID: 33640850 DOI: 10.1016/j.jcis.2021.02.017] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Revised: 01/13/2021] [Accepted: 02/04/2021] [Indexed: 10/22/2022]
Abstract
HYPOTHESIS Generation of long-range ordering of colloidal particles through anisotropic interactions is of growing interest in material designing. At submicron-scale, routine works use synthetic spheres or rods but the knowledge pertaining to assembly of binary combination of particles is severely restricted. Improved understanding of the fundamental aspects that drive self-assembly, can lead to robust strategies for fabrication of topographically oriented films. EXPERIMENT The fluidical geometry of a liquid crystalline (LC) solution of polysaccharide consisting of micron-sized rod and platelet units was explored. The solutions, characterized for their rheological behavior, were evaporated from a rectangular cavity. The assembly and orientation of the units was monitored by polarizing microscopy and the interparticle capillary forces approximated mathematically. FINDINGS The units deposited into an uninterrupted membrane upon interfacial evaporation, forming a bridge along the 8 mm gap, linking the substrates. The membrane, composed of a lamellar structure, was uniaxially oriented along the direction of the gap. The rheological estimations corroborated an extremely high value of viscosity with the presence of crosslinking junctions in this solution when compared to a solution with only rod units, capable of bridging a maximum of 1 mm. It has been demonstrated for the very first time that the presence of platelet-units contributes lateral capillary interactions and assist rod-units towards a wider, self-assembled structure.
Collapse
Affiliation(s)
- Gargi Joshi
- Graduate School of Advanced Science and Technology, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa 923-1292, Japan; B CUBE-Center for Molecular Bioengineering, Technische Universität Dresden 01307, Germany
| | - Kosuke Okeyoshi
- Graduate School of Advanced Science and Technology, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa 923-1292, Japan.
| | | | - Tetsu Mitsumata
- Graduate School of Science and Technology, Niigata University, Niigata 950-2181, Japan
| | - Maiko K Okajima
- Graduate School of Advanced Science and Technology, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa 923-1292, Japan
| | - Tatsuo Kaneko
- Graduate School of Advanced Science and Technology, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa 923-1292, Japan.
| |
Collapse
|
21
|
Abstract
Living systems at all scales aggregate in large numbers for a variety of functions including mating, predation, and survival. The majority of such systems consist of unconnected individuals that collectively flock, school, or swarm. However, some aggregations involve physically entangled individuals, which can confer emergent mechanofunctional material properties to the collective. Here, we study in laboratory experiments and rationalize in theoretical and robophysical models the dynamics of physically entangled and motile self-assemblies of 1-cm-long California blackworms (Lumbriculus variegatus, Annelida: Clitellata: Lumbriculidae). Thousands of individual worms form braids with their long, slender, and flexible bodies to make a three-dimensional, soft, and shape-shifting "blob." The blob behaves as a living material capable of mitigating damage and assault from environmental stresses through dynamic shape transformations, including minimizing surface area for survival against desiccation and enabling transport (negative thermotaxis) from hazardous environments (like heat). We specifically focus on the locomotion of the blob to understand how an amorphous entangled ball of worms can break symmetry to move across a substrate. We hypothesize that the collective blob displays rudimentary differentiation of function across itself, which when combined with entanglement dynamics facilitates directed persistent blob locomotion. To test this, we develop a robophysical model of the worm blobs, which displays emergent locomotion in the collective without sophisticated control or programming of any individual robot. The emergent dynamics of the living functional blob and robophysical model can inform the design of additional classes of adaptive mechanofunctional living materials and emergent robotics.
Collapse
|
22
|
Han K, Snezhko A. Programmable chiral states in flocks of active magnetic rollers. LAB ON A CHIP 2021; 21:215-222. [PMID: 33295921 DOI: 10.1039/d0lc00892c] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Inspired by nature, active matter exemplified by self-organization of motile units into macroscopic structures holds great promise for advanced tunable materials capable of flocking, shape-shifting, and self-healing. Active particles driven by external fields have repeatedly demonstrated potential for complex self-organization and collective behavior, yet how to guide the direction of their collective motion largely remains unexplored. Here, we report a system of microscopic ferromagnetic rollers driven by an alternating magnetic field that demonstrates programmable control of the direction of a self-organized coherent vortical motion (i.e., chirality). Facilitated by a droplet confinement, the rollers get synchronized and display either right- or left-handed spontaneous vortical motion, such that their moving direction determines the vortex chirality. We reveal that one can remotely command a flock of magnetic rollers to switch or maintain its chiral state by modulating a phase shift of the sinusoidal magnetic field powering the active rollers. Building on our findings, we realize a self-assembled remotely controlled micro-pump architecture capable of switching the fluid transport direction on demand. Our studies may stimulate new design strategies for directed transport and flocking robotics at the microscale based on active colloids.
Collapse
Affiliation(s)
- Koohee Han
- Materials Science Division, Argonne National Laboratory, Lemont, IL 60439, USA.
| | | |
Collapse
|
23
|
Tennenbaum M, Fernandez-Nieves A. Activity effects on the nonlinear mechanical properties of fire-ant aggregations. Phys Rev E 2020; 102:012602. [PMID: 32794916 DOI: 10.1103/physreve.102.012602] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Accepted: 06/09/2020] [Indexed: 12/14/2022]
Abstract
Individual fire ants are inherently active as they are living organisms that convert stored chemical energy into motion. However, each individual ant is not equally disposed to motion at any given time. In an active aggregation, most of the constituent ants are active, and vice versa for an inactive aggregation. Here we look at the role activity plays on the nonlinear mechanical behavior of the aggregation through large amplitude oscillatory shear measurements. We find that the level of viscous nonlinearity can be decreased by increasing the activity or by increasing the volume fraction. In contrast, the level of elastic nonlinearity is not affected by either activity or volume fraction. We interpret this in terms of a transient network with equal rates of linking and unlinking but with varying number of linking and unlinking events.
Collapse
Affiliation(s)
- Michael Tennenbaum
- School of Physics, Georgia Institute of Technology, Atlanta, Georgia 30332, USA.,Department of Condensed Matter Physics, University of Barcelona, 08028 Barcelona, Spain
| | - Alberto Fernandez-Nieves
- School of Physics, Georgia Institute of Technology, Atlanta, Georgia 30332, USA.,Department of Condensed Matter Physics, University of Barcelona, 08028 Barcelona, Spain.,ICREA-Instituci Catalana de Recerca i Estudis Avanats, 08010 Barcelona, Spain
| |
Collapse
|
24
|
Nave GK, Mitchell NT, Chan Dick JA, Schuessler T, Lagarrigue JA, Peleg O. Attraction, Dynamics, and Phase Transitions in Fire Ant Tower-Building. Front Robot AI 2020; 7:25. [PMID: 33501194 PMCID: PMC7806095 DOI: 10.3389/frobt.2020.00025] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2019] [Accepted: 02/13/2020] [Indexed: 11/18/2022] Open
Abstract
Many insect species, and even some vertebrates, assemble their bodies to form multi-functional materials that combine sensing, computation, and actuation. The tower-building behavior of red imported fire ants, Solenopsis invicta, presents a key example of this phenomenon of collective construction. While biological studies of collective construction focus on behavioral assays to measure the dynamics of formation and studies of swarm robotics focus on developing hardware that can assemble and interact, algorithms for designing such collective aggregations have been mostly overlooked. We address this gap by formulating an agent-based model for collective tower-building with a set of behavioral rules that incorporate local sensing of neighboring agents. We find that an attractive force makes tower building possible. Next, we explore the trade-offs between attraction and random motion to characterize the dynamics and phase transition of the tower building process. Lastly, we provide an optimization tool that may be used to design towers of specific shapes, mechanical loads, and dynamical properties, such as mechanical stability and mobility of the center of mass.
Collapse
Affiliation(s)
- Gary K. Nave
- BioFrontiers Institute, University of Colorado Boulder, Boulder, CO, United States
- Computer Science, University of Colorado Boulder, Boulder, CO, United States
| | - Nelson T. Mitchell
- Computer Science, University of Colorado Boulder, Boulder, CO, United States
| | - Jordan A. Chan Dick
- Computer Science, University of Colorado Boulder, Boulder, CO, United States
| | - Tyler Schuessler
- Applied Mathematics, University of Colorado Boulder, Boulder, CO, United States
| | - Joaquin A. Lagarrigue
- Computer Science, University of Colorado Boulder, Boulder, CO, United States
- Psychology and Neuroscience, University of Colorado Boulder, Boulder, CO, United States
| | - Orit Peleg
- BioFrontiers Institute, University of Colorado Boulder, Boulder, CO, United States
- Computer Science, University of Colorado Boulder, Boulder, CO, United States
- Santa Fe Institute, Santa Fe, NM, United States
| |
Collapse
|
25
|
Koshani R, Jafari SM. Ultrasound-assisted preparation of different nanocarriers loaded with food bioactive ingredients. Adv Colloid Interface Sci 2019; 270:123-146. [PMID: 31226521 DOI: 10.1016/j.cis.2019.06.005] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Revised: 05/09/2019] [Accepted: 06/09/2019] [Indexed: 12/30/2022]
Abstract
Developing green and facile approaches to produce nanostructures suitable for bioactives, nanoencapsulation faces some challenges in the nutraceutical and food bioactive industries due to potential risks arising from nanomaterials fabrication and consumption. High-intensity ultrasound is an effective technology to generate different bio-based structures in sub-micron or nanometer scale. This technique owing to some intrinsic advantages such as safety, straightforward operation, energy efficiency, and scale-up potential, as well as, ability to control over size and morpHology has stood out among various nanosynthetic routes. Ultrasonically-provided energy is mainly transferred to the droplets and particles via acoustic cavitation (which is formation, growth, and implosive collapse of bubbles in solvent). This review provides an outlook on the fundamentals of ultrasonication and some applicable setups in nanoencapsulation. Different kinds of nanostructures based on surfactants, lipids, proteins and carbohydrates formed by sonication, along with their advantages and disadvantages are assessed from the viewpoint of stability, particle size, and process impacts on some functionalities. The gastrointestinal fate and safety issues of ultrasonically prepared nanostructures are also discussed. Sonication, itself or in combination with other encapsulation approaches, alongside biopolymers generate nano-engineered carriers with enough stability, small particle sizes, and a low polydispersity. The nano-sized systems improve techno-functional activities of encapsulated bioactive agents including stability, solubility, dissolution, availability, controlled and targeted release profile in vitro and in vivo plus other bioactive properties such as antioxidant and antimicrobial capacities. Ultrasonically prepared nanocarriers show a great potential in fortifying food products with desired bioactive components, especially for the industrial applications.
Collapse
Affiliation(s)
- Roya Koshani
- Department of Chemistry, Quebec Centre for Advanced Materials, Pulp and Paper Research Centre, McGill University, Montreìal, Queìbec H3A 0B8, Canada; Department of Food Materials and Process Design Engineering, Gorgan University of Agricultural Science and Natural Resources, Gorgan, Iran
| | - Seid Mahdi Jafari
- Department of Food Materials and Process Design Engineering, Gorgan University of Agricultural Science and Natural Resources, Gorgan, Iran.
| |
Collapse
|