1
|
Dan C, Hulse BK, Kappagantula R, Jayaraman V, Hermundstad AM. A neural circuit architecture for rapid learning in goal-directed navigation. Neuron 2024; 112:2581-2599.e23. [PMID: 38795708 DOI: 10.1016/j.neuron.2024.04.036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Revised: 01/16/2024] [Accepted: 04/30/2024] [Indexed: 05/28/2024]
Abstract
Anchoring goals to spatial representations enables flexible navigation but is challenging in novel environments when both representations must be acquired simultaneously. We propose a framework for how Drosophila uses internal representations of head direction (HD) to build goal representations upon selective thermal reinforcement. We show that flies use stochastically generated fixations and directed saccades to express heading preferences in an operant visual learning paradigm and that HD neurons are required to modify these preferences based on reinforcement. We used a symmetric visual setting to expose how flies' HD and goal representations co-evolve and how the reliability of these interacting representations impacts behavior. Finally, we describe how rapid learning of new goal headings may rest on a behavioral policy whose parameters are flexible but whose form is genetically encoded in circuit architecture. Such evolutionarily structured architectures, which enable rapidly adaptive behavior driven by internal representations, may be relevant across species.
Collapse
Affiliation(s)
- Chuntao Dan
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Brad K Hulse
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Ramya Kappagantula
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Vivek Jayaraman
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
| | - Ann M Hermundstad
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
| |
Collapse
|
2
|
Le Hen G, Masoni A, Manuelli M, Falsini S, Corti E, Balzani P, Renault D, Papini A, Santini G. Ants avoid food contaminated with micro- and nanoplastics. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 360:124625. [PMID: 39069242 DOI: 10.1016/j.envpol.2024.124625] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Revised: 07/07/2024] [Accepted: 07/26/2024] [Indexed: 07/30/2024]
Abstract
Micro- and nanoplastics (MNP) have recently received particular attention in freshwater and marine ecosystems, but less is known about their impact on terrestrial species. Ants can be used as biological indicators for many types of pollutants and are therefore a good candidate to explore the effects of MNP pollution. In the present study, we investigated the ability of workers from seven colonies of the acrobat ant Crematogaster scutellaris to detect MNP in their food. After two days of starvation, groups of ten ants were tested for their preference toward control and polyethylene-treated solutions. Every 5 min over a total 20 min period, the number of workers feeding on either solution was counted. The results showed that C. scutellaris workers could detect and avoid contaminated food, feeding more often on the uncontaminated solution in the first 10 min. However, after 10 min the food preference was no longer significant between the groups, likely owing to feeding satiation. We then assessed whether this feeding behaviour is sufficient to cause the accumulation of MNP in the ant. We thereby provided a solution containing fluorescent MNP (fMNP) at the same concentration as in the previous experiments. Observation of the ants' mouthparts using fluorescent light microscopy showed that after 10 min dense aggregations of fMNP were visible. Further investigations are needed to understand the mechanisms of detection of MNP by ants, and the accumulation dynamics in ants' bodies. Moreover, the effects of MNP on the integrity and fitness of ant colonies, as well as the potential transfer across terrestrial trophic chains should be explored.
Collapse
Affiliation(s)
- Gwendaline Le Hen
- Université de Rennes, CNRS, ECOBIO [(Ecosystèmes, biodiversité, évolution)], UMR 6553, 35000 Rennes, France; Università degli Studi di Firenze, Dipartimento di Biologia, Via Madonna del Piano, 6, 50019, Sesto Fiorentino, Italy.
| | - Alberto Masoni
- Università degli Studi di Firenze, Dipartimento di Biologia, Via Madonna del Piano, 6, 50019, Sesto Fiorentino, Italy
| | - Marta Manuelli
- Università degli Studi di Firenze, Dipartimento di Biologia, Via Madonna del Piano, 6, 50019, Sesto Fiorentino, Italy
| | - Sara Falsini
- Università degli Studi di Firenze, Dipartimento di Biologia, Via Pier Antonio Micheli, 3, 50121, Firenze, Italy
| | - Emilio Corti
- Università degli Studi di Firenze, Dipartimento di Biologia, Via Pier Antonio Micheli, 3, 50121, Firenze, Italy
| | - Paride Balzani
- University of South Bohemia in České Budějovice, South Bohemian Research Center of Aquaculture and Biodiversity of Hydrocenoses, Faculty of Fisheries and Protection of Waters, Zátiší 728/II, 389 25 Vodňany, Czech Republic
| | - David Renault
- Université de Rennes, CNRS, ECOBIO [(Ecosystèmes, biodiversité, évolution)], UMR 6553, 35000 Rennes, France; Institut Universitaire de France, 1 Rue Descartes, 75231 Paris cedex 05, France
| | - Alessio Papini
- Università degli Studi di Firenze, Dipartimento di Biologia, Via Pier Antonio Micheli, 3, 50121, Firenze, Italy
| | - Giacomo Santini
- Università degli Studi di Firenze, Dipartimento di Biologia, Via Madonna del Piano, 6, 50019, Sesto Fiorentino, Italy
| |
Collapse
|
3
|
Tadres D, Saxena N, Louis M. Tracking the Navigation Behavior of Drosophila Larvae in Real and Virtual Odor Gradients by Using the Raspberry Pi Virtual Reality (PiVR) System. Cold Spring Harb Protoc 2024; 2024:pdb.top108098. [PMID: 37258056 DOI: 10.1101/pdb.top108098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
In a closed-loop experimental paradigm, an animal experiences a modulation of its sensory input as a function of its own behavior. Tools enabling closed-loop experiments are crucial for delineating causal relationships between the activity of genetically labeled neurons and specific behavioral responses. We have recently developed an experimental platform known as "Raspberry Pi Virtual Reality" (PiVR) that is used to perform closed-loop optogenetic stimulation of neurons in unrestrained animals. PiVR is a system that operates at high temporal resolution (>30-Hz) and with low latencies. Larvae of the fruit fly Drosophila melanogaster are ideal to study the role of individual neurons in modulating behavior to aid the understanding of the neural pathways underlying various guided behaviors. Here, we introduce larval chemotaxis as an example of a navigational behavior in which an animal seeks to locate a target-in this case, the attractive source of an odor-by tracking a concentration gradient. The methodologies that we describe here combine the use of PiVR with the study of larval chemotaxis in real and virtual odor gradients, but these can also be readily adapted to other sensory modalities.
Collapse
Affiliation(s)
- David Tadres
- Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California 93106, USA
- Neuroscience Research Institute, University of California, Santa Barbara, Santa Barbara, California 93106, USA
- Department of Molecular Life Sciences, University of Zurich, CH-8057 Zurich, Switzerland
| | - Nitesh Saxena
- Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California 93106, USA
- Neuroscience Research Institute, University of California, Santa Barbara, Santa Barbara, California 93106, USA
| | - Matthieu Louis
- Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California 93106, USA
- Neuroscience Research Institute, University of California, Santa Barbara, Santa Barbara, California 93106, USA
- Department of Physics, University of California, Santa Barbara, Santa Barbara, California 93106, USA
| |
Collapse
|
4
|
Dombrovski M, Peek MY, Park JY, Vaccari A, Sumathipala M, Morrow C, Breads P, Zhao A, Kurmangaliyev YZ, Sanfilippo P, Rehan A, Polsky J, Alghailani S, Tenshaw E, Namiki S, Zipursky SL, Card GM. Synaptic gradients transform object location to action. Nature 2023; 613:534-542. [PMID: 36599984 PMCID: PMC9849133 DOI: 10.1038/s41586-022-05562-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Accepted: 11/11/2022] [Indexed: 01/06/2023]
Abstract
To survive, animals must convert sensory information into appropriate behaviours1,2. Vision is a common sense for locating ethologically relevant stimuli and guiding motor responses3-5. How circuitry converts object location in retinal coordinates to movement direction in body coordinates remains largely unknown. Here we show through behaviour, physiology, anatomy and connectomics in Drosophila that visuomotor transformation occurs by conversion of topographic maps formed by the dendrites of feature-detecting visual projection neurons (VPNs)6,7 into synaptic weight gradients of VPN outputs onto central brain neurons. We demonstrate how this gradient motif transforms the anteroposterior location of a visual looming stimulus into the fly's directional escape. Specifically, we discover that two neurons postsynaptic to a looming-responsive VPN type promote opposite takeoff directions. Opposite synaptic weight gradients onto these neurons from looming VPNs in different visual field regions convert localized looming threats into correctly oriented escapes. For a second looming-responsive VPN type, we demonstrate graded responses along the dorsoventral axis. We show that this synaptic gradient motif generalizes across all 20 primary VPN cell types and most often arises without VPN axon topography. Synaptic gradients may thus be a general mechanism for conveying spatial features of sensory information into directed motor outputs.
Collapse
Affiliation(s)
- Mark Dombrovski
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA
| | - Martin Y Peek
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jin-Yong Park
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Andrea Vaccari
- Department of Computer Science, Middlebury College, Middlebury, VT, USA
| | | | - Carmen Morrow
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Patrick Breads
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Arthur Zhao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Yerbol Z Kurmangaliyev
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA
| | - Piero Sanfilippo
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA
| | - Aadil Rehan
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA
| | - Jason Polsky
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shada Alghailani
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Emily Tenshaw
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shigehiro Namiki
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.,Research Center for Advanced Science and Technology, University of Tokyo, Tokyo, Japan
| | - S Lawrence Zipursky
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.
| | - Gwyneth M Card
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA. .,Department of Neuroscience, Howard Hughes Medical Institute, The Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
| |
Collapse
|
5
|
Liu F, Deswal S, Christou A, Sandamirskaya Y, Kaboli M, Dahiya R. Neuro-inspired electronic skin for robots. Sci Robot 2022; 7:eabl7344. [PMID: 35675450 DOI: 10.1126/scirobotics.abl7344] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Touch is a complex sensing modality owing to large number of receptors (mechano, thermal, pain) nonuniformly embedded in the soft skin all over the body. These receptors can gather and encode the large tactile data, allowing us to feel and perceive the real world. This efficient somatosensation far outperforms the touch-sensing capability of most of the state-of-the-art robots today and suggests the need for neural-like hardware for electronic skin (e-skin). This could be attained through either innovative schemes for developing distributed electronics or repurposing the neuromorphic circuits developed for other sensory modalities such as vision and audio. This Review highlights the hardware implementations of various computational building blocks for e-skin and the ways they can be integrated to potentially realize human skin-like or peripheral nervous system-like functionalities. The neural-like sensing and data processing are discussed along with various algorithms and hardware architectures. The integration of ultrathin neuromorphic chips for local computation and the printed electronics on soft substrate used for the development of e-skin over large areas are expected to advance robotic interaction as well as open new avenues for research in medical instrumentation, wearables, electronics, and neuroprosthetics.
Collapse
Affiliation(s)
- Fengyuan Liu
- Bendable Electronics and Sensing Technologies (BEST) Group, James Watt School of Engineering, University of Glasgow, G12 8QQ Glasgow, UK
| | - Sweety Deswal
- Bendable Electronics and Sensing Technologies (BEST) Group, James Watt School of Engineering, University of Glasgow, G12 8QQ Glasgow, UK
| | - Adamos Christou
- Bendable Electronics and Sensing Technologies (BEST) Group, James Watt School of Engineering, University of Glasgow, G12 8QQ Glasgow, UK
| | | | - Mohsen Kaboli
- Department of Research, New Technologies, Innovation, BMW Group, Parkring 19, 85748 Garching bei Munchen, Germany.,Cognitive Robotics and Tactile Intelligence Group, Donders Institute for Brain, Cognition, and Behaviour, Radboud University, Nijmegen, Netherlands
| | - Ravinder Dahiya
- Bendable Electronics and Sensing Technologies (BEST) Group, James Watt School of Engineering, University of Glasgow, G12 8QQ Glasgow, UK
| |
Collapse
|
6
|
Krauhausen I, Koutsouras DA, Melianas A, Keene ST, Lieberth K, Ledanseur H, Sheelamanthula R, Giovannitti A, Torricelli F, Mcculloch I, Blom PWM, Salleo A, van de Burgt Y, Gkoupidenis P. Organic neuromorphic electronics for sensorimotor integration and learning in robotics. SCIENCE ADVANCES 2021; 7:eabl5068. [PMID: 34890232 PMCID: PMC8664264 DOI: 10.1126/sciadv.abl5068] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
In living organisms, sensory and motor processes are distributed, locally merged, and capable of forming dynamic sensorimotor associations. We introduce a simple and efficient organic neuromorphic circuit for local sensorimotor merging and processing on a robot that is placed in a maze. While the robot is exposed to external environmental stimuli, visuomotor associations are formed on the adaptable neuromorphic circuit. With this on-chip sensorimotor integration, the robot learns to follow a path to the exit of a maze, while being guided by visually indicated paths. The ease of processability of organic neuromorphic electronics and their unconventional form factors, in combination with education-purpose robotics, showcase a promising approach of an affordable, versatile, and readily accessible platform for exploring, designing, and evaluating behavioral intelligence through decentralized sensorimotor integration.
Collapse
Affiliation(s)
- Imke Krauhausen
- Max Planck Institute for Polymer Research, Mainz, Germany
- Microsystems, Institute for Complex Molecular Systems, Eindhoven University of Technology, Eindhoven, Netherlands
| | | | - Armantas Melianas
- Department of Materials Science and Engineering, Stanford University, Stanford, CA 94305, USA
- Exponent, 149 Commonwealth Dr, Menlo Park, CA 94025, USA
| | - Scott T. Keene
- Department of Engineering, University of Cambridge, Cambridge, UK
| | | | | | - Rajendar Sheelamanthula
- KAUST Solar Center, Physical Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia
| | - Alexander Giovannitti
- Department of Materials Science and Engineering, Stanford University, Stanford, CA 94305, USA
| | - Fabrizio Torricelli
- Department of Information Engineering, University of Brescia, 25123 Brescia, Italy
| | - Iain Mcculloch
- KAUST Solar Center, Physical Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia
- Department of Chemistry, University of Oxford, Oxford, UK
| | | | - Alberto Salleo
- Department of Materials Science and Engineering, Stanford University, Stanford, CA 94305, USA
- Corresponding author. (A.S.); (Y.v.d.B); (P.G.)
| | - Yoeri van de Burgt
- Microsystems, Institute for Complex Molecular Systems, Eindhoven University of Technology, Eindhoven, Netherlands
- Corresponding author. (A.S.); (Y.v.d.B); (P.G.)
| | - Paschalis Gkoupidenis
- Max Planck Institute for Polymer Research, Mainz, Germany
- Corresponding author. (A.S.); (Y.v.d.B); (P.G.)
| |
Collapse
|
7
|
Hulse BK, Haberkern H, Franconville R, Turner-Evans DB, Takemura SY, Wolff T, Noorman M, Dreher M, Dan C, Parekh R, Hermundstad AM, Rubin GM, Jayaraman V. A connectome of the Drosophila central complex reveals network motifs suitable for flexible navigation and context-dependent action selection. eLife 2021; 10:66039. [PMID: 34696823 PMCID: PMC9477501 DOI: 10.7554/elife.66039] [Citation(s) in RCA: 122] [Impact Index Per Article: 40.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2020] [Accepted: 09/07/2021] [Indexed: 11/13/2022] Open
Abstract
Flexible behaviors over long timescales are thought to engage recurrent neural networks in deep brain regions, which are experimentally challenging to study. In insects, recurrent circuit dynamics in a brain region called the central complex (CX) enable directed locomotion, sleep, and context- and experience-dependent spatial navigation. We describe the first complete electron-microscopy-based connectome of the Drosophila CX, including all its neurons and circuits at synaptic resolution. We identified new CX neuron types, novel sensory and motor pathways, and network motifs that likely enable the CX to extract the fly's head-direction, maintain it with attractor dynamics, and combine it with other sensorimotor information to perform vector-based navigational computations. We also identified numerous pathways that may facilitate the selection of CX-driven behavioral patterns by context and internal state. The CX connectome provides a comprehensive blueprint necessary for a detailed understanding of network dynamics underlying sleep, flexible navigation, and state-dependent action selection.
Collapse
Affiliation(s)
- Brad K Hulse
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Hannah Haberkern
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Romain Franconville
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | | | | | - Tanya Wolff
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Marcella Noorman
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Marisa Dreher
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Chuntao Dan
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Ruchi Parekh
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | | | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Vivek Jayaraman
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| |
Collapse
|
8
|
Schwaner MJ, Hsieh ST, Braasch I, Bradley S, Campos CB, Collins CE, Donatelli CM, Fish FE, Fitch OE, Flammang BE, Jackson BE, Jusufi A, Mekdara PJ, Patel A, Swalla BJ, Vickaryous M, McGowan CP. Future Tail Tales: A Forward-Looking, Integrative Perspective on Tail Research. Integr Comp Biol 2021; 61:521-537. [PMID: 33999184 PMCID: PMC8680820 DOI: 10.1093/icb/icab082] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Synopsis Tails are a defining characteristic of chordates and show enormous diversity in function and shape. Although chordate tails share a common evolutionary and genetic-developmental origin, tails are extremely versatile in morphology and function. For example, tails can be short or long, thin or thick, and feathered or spiked, and they can be used for propulsion, communication, or balancing, and they mediate in predator-prey outcomes. Depending on the species of animal the tail is attached to, it can have extraordinarily multi-functional purposes. Despite its morphological diversity and broad functional roles, tails have not received similar scientific attention as, for example, the paired appendages such as legs or fins. This forward-looking review article is a first step toward interdisciplinary scientific synthesis in tail research. We discuss the importance of tail research in relation to five topics: (1) evolution and development, (2) regeneration, (3) functional morphology, (4) sensorimotor control, and (5) computational and physical models. Within each of these areas, we highlight areas of research and combinations of long-standing and new experimental approaches to move the field of tail research forward. To best advance a holistic understanding of tail evolution and function, it is imperative to embrace an interdisciplinary approach, re-integrating traditionally siloed fields around discussions on tail-related research.
Collapse
Affiliation(s)
- M J Schwaner
- Department of Ecology and Evolutionary Biology, University of California Irvine, Irvine, CA 92697, USA
| | - S T Hsieh
- Department of Biology, Temple University, Philadelphia, PA 19122, USA
| | - I Braasch
- Department of Integrative Biology and Program in Ecology, Evolution, and Behavior (EEB), Michigan State University, East Lansing, MI 48824, USA
| | - S Bradley
- Department of Biomedical Science, University of Guelph, Guelph N1G 2W1, Canada
| | - C B Campos
- Department of Biological Sciences, Sacramento State University, Sacramento, CA 95819, USA
| | - C E Collins
- Department of Biological Sciences, Sacramento State University, Sacramento, CA 95819, USA
| | - C M Donatelli
- Department of Biology, University of Ottawa, Ontario K1N 6N5, Canada
| | - F E Fish
- Department of Biology, West Chester University, West Chester, PA 19383, USA
| | - O E Fitch
- Department of Integrative Biology and Program in Ecology, Evolution, and Behavior (EEB), Michigan State University, East Lansing, MI 48824, USA
| | - B E Flammang
- Department of Biological Sciences, New Jersey Institute of Technology, Newark, NJ 07102, USA
| | - B E Jackson
- Department of Biological and Environmental Sciences, Longwood University, Farmville, VA 23909, USA
| | - A Jusufi
- Max Planck Institute for Intelligent Systems, Stuttgart 70569, Germany
| | - P J Mekdara
- National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD 20892, USA
| | - A Patel
- Department of Electrical Engineering, University of Cape Town, Cape Town 7701, South Africa
| | - B J Swalla
- Department of Biology, University of Washington, Seattle, WA 98195, USA
| | - M Vickaryous
- Department of Biomedical Science, University of Guelph, Guelph N1G 2W1, Canada
| | - C P McGowan
- Department of Integrative Anatomical Sciences, University of Southern California, Los Angeles, CA 90033, USA
| |
Collapse
|
9
|
Louis M. Mini-brain computations converting dynamic olfactory inputs into orientation behavior. Curr Opin Neurobiol 2020; 64:1-9. [PMID: 31837503 PMCID: PMC7286801 DOI: 10.1016/j.conb.2019.11.015] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2019] [Revised: 11/18/2019] [Accepted: 11/20/2019] [Indexed: 01/15/2023]
Abstract
The neural logic underlying the conversion of non-stationary (dynamic) olfactory inputs into odor-search behaviors has been difficult to crack due to the distributed nature of the olfactory code - food odors typically co-activate multiple olfactory sensory neurons. In the Drosophila larva, the activity of a single olfactory sensory neuron is sufficient to direct accurate reorientation maneuvers in odor gradients (chemotaxis). In this reduced sensory system, a descending pathway essential for larval chemotaxis has been delineated from the peripheral olfactory system down to the premotor system. Here, I review how anatomical and functional inspections of this pathway have advanced our understanding of the neural mechanisms that convert behaviorally relevant sensory signals into orientation responses.
Collapse
Affiliation(s)
- Matthieu Louis
- Neuroscience Research Institute & Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA; Department of Physics, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
| |
Collapse
|
10
|
Mukherjee N, Wachutka J, Katz DB. Impact of precisely-timed inhibition of gustatory cortex on taste behavior depends on single-trial ensemble dynamics. eLife 2019; 8:e45968. [PMID: 31232693 PMCID: PMC6625792 DOI: 10.7554/elife.45968] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2019] [Accepted: 06/21/2019] [Indexed: 11/21/2022] Open
Abstract
Sensation and action are necessarily coupled during stimulus perception - while tasting, for instance, perception happens while an animal decides to expel or swallow the substance in the mouth (the former via a behavior known as 'gaping'). Taste responses in the rodent gustatory cortex (GC) span this sensorimotor divide, progressing through firing-rate epochs that culminate in the emergence of action-related firing. Population analyses reveal this emergence to be a sudden, coherent and variably-timed ensemble transition that reliably precedes gaping onset by 0.2-0.3s. Here, we tested whether this transition drives gaping, by delivering 0.5s GC perturbations in tasting trials. Perturbations significantly delayed gaping, but only when they preceded the action-related transition - thus, the same perturbation impacted behavior or not, depending on the transition latency in that particular trial. Our results suggest a distributed attractor network model of taste processing, and a dynamical role for cortex in driving motor behavior.
Collapse
Affiliation(s)
- Narendra Mukherjee
- Program in NeuroscienceBrandeis UniversityWalthamUnited States
- Volen National Center for Complex SystemsBrandeis UniversityWalthamUnited States
- Department of PsychologyBrandeis UniversityWalthamUnited States
| | - Joseph Wachutka
- Program in NeuroscienceBrandeis UniversityWalthamUnited States
- Volen National Center for Complex SystemsBrandeis UniversityWalthamUnited States
- Department of PsychologyBrandeis UniversityWalthamUnited States
| | - Donald B Katz
- Program in NeuroscienceBrandeis UniversityWalthamUnited States
- Volen National Center for Complex SystemsBrandeis UniversityWalthamUnited States
- Department of PsychologyBrandeis UniversityWalthamUnited States
| |
Collapse
|
11
|
Budaev S, Jørgensen C, Mangel M, Eliassen S, Giske J. Decision-Making From the Animal Perspective: Bridging Ecology and Subjective Cognition. Front Ecol Evol 2019. [DOI: 10.3389/fevo.2019.00164] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
|
12
|
|
13
|
Schretter CE, Vielmetter J, Bartos I, Marka Z, Marka S, Argade S, Mazmanian SK. A gut microbial factor modulates locomotor behaviour in Drosophila. Nature 2018; 563:402-406. [PMID: 30356215 PMCID: PMC6237646 DOI: 10.1038/s41586-018-0634-9] [Citation(s) in RCA: 160] [Impact Index Per Article: 26.7] [Reference Citation Analysis] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Accepted: 09/11/2018] [Indexed: 12/19/2022]
Affiliation(s)
- Catherine E Schretter
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.
| | - Jost Vielmetter
- Protein Expression Center, Beckman Institute, California Institute of Technology, Pasadena, CA, USA
| | - Imre Bartos
- Department of Physics, Columbia University, New York, NY, USA
| | - Zsuzsa Marka
- Department of Physics, Columbia University, New York, NY, USA
| | - Szabolcs Marka
- Department of Physics, Columbia University, New York, NY, USA
| | - Sulabha Argade
- GlycoAnalytics Core, University of California, San Diego, CA, USA
| | - Sarkis K Mazmanian
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.
| |
Collapse
|
14
|
Parmiani P, Lucchetti C, Franchi G. Whisker and Nose Tactile Sense Guide Rat Behavior in a Skilled Reaching Task. Front Behav Neurosci 2018. [PMID: 29515377 PMCID: PMC5826357 DOI: 10.3389/fnbeh.2018.00024] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023] Open
Abstract
Skilled reaching is a complex movement in which a forelimb is extended to grasp food for eating. Video-recordings analysis of control rats enables us to distinguish several components of skilled reaching: Orient, approaching the front wall of the reaching box and poking the nose into the slot to locate the food pellet; Transport, advancing the forelimb through the slot to reach-grasp the pellet; and Withdrawal of the grasped food to eat. Although food location and skilled reaching is guided by olfaction, the importance of whisker/nose tactile sense in rats suggests that this too could play a role in reaching behavior. To test this hypothesis, we studied skilled reaching in rats trained in a single-pellet reaching task before and after bilateral whisker trimming and bilateral infraorbital nerve (ION) severing. During the task, bilaterally trimmed rats showed impaired Orient with respect to controls. Specifically, they detected the presence of the wall by hitting it with their nose (rather than their whiskers), and then located the slot through repetitive nose touches. The number of nose touches preceding poking was significantly higher in comparison to controls. On the other hand, macrovibrissae trimming resulted in no change in reaching/grasping or withdrawal components of skilled reaching. Bilaterally ION-severed rats, displayed a marked change in the structure of their skilled reaching. With respect to controls, in ION-severed rats: (a) approaches to the front wall were significantly reduced at 3–5 and 6–8 days; (b) nose pokes were significantly reduced at 3–5 days, and the slot was only located after many repetitive nose touches; (c) the reaching-grasping-retracting movement never appeared at 3–5 days; (d) explorative paw movements, equal to zero in controls, reached significance at 9–11 days; and (e) the restored reaching-grasping-retracting sequence was globally slower than in controls, but the success rate was the same. These findings strongly indicate that whisker trimming affected Orient, but not the reaching-grasping movement, while ION severing impaired both Orient (persistently) and reaching-grasping-retracting (transiently, for 1–2 weeks) components of skilled reaching in rats.
Collapse
Affiliation(s)
- Pierantonio Parmiani
- Department of Biomedical and Specialty Surgical Sciences, Section of Human Physiology, University of Ferrara, Ferrara, Italy.,Center for Translational Neurophysiology, Istituto Italiano di Tecnologia, Ferrara, Italy
| | - Cristina Lucchetti
- Department of Biomedical, Metabolic and Neural Sciences, Section of Physiology and Neuroscience, University of Modena and Reggio Emilia, Modena, Italy
| | - Gianfranco Franchi
- Department of Biomedical and Specialty Surgical Sciences, Section of Human Physiology, University of Ferrara, Ferrara, Italy
| |
Collapse
|
15
|
White RS, Spencer RM, Nusbaum MP, Blitz DM. State-dependent sensorimotor gating in a rhythmic motor system. J Neurophysiol 2017; 118:2806-2818. [PMID: 28814634 DOI: 10.1152/jn.00420.2017] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2017] [Revised: 08/14/2017] [Accepted: 08/14/2017] [Indexed: 11/22/2022] Open
Abstract
Sensory feedback influences motor circuits and/or their projection neuron inputs to adjust ongoing motor activity, but its efficacy varies. Currently, less is known about regulation of sensory feedback onto projection neurons that control downstream motor circuits than about sensory regulation of the motor circuit neurons themselves. In this study, we tested whether sensory feedback onto projection neurons is sensitive only to activation of a motor system, or also to the modulatory state underlying that activation, using the crab Cancer borealis stomatogastric nervous system. We examined how proprioceptor neurons (gastropyloric receptors, GPRs) influence the gastric mill (chewing) circuit neurons and the projection neurons (MCN1, CPN2) that drive the gastric mill rhythm. During gastric mill rhythms triggered by the mechanosensory ventral cardiac neurons (VCNs), GPR was shown previously to influence gastric mill circuit neurons, but its excitation of MCN1/CPN2 was absent. In this study, we tested whether GPR effects on MCN1/CPN2 are also absent during gastric mill rhythms triggered by the peptidergic postoesophageal commissure (POC) neurons. The VCN and POC pathways both trigger lasting MCN1/CPN2 activation, but their distinct influence on circuit feedback to these neurons produces different gastric mill motor patterns. We show that GPR excites MCN1 and CPN2 during the POC-gastric mill rhythm, altering their firing rates and activity patterns. This action changes both phases of the POC-gastric mill rhythm, whereas GPR only alters one phase of the VCN-gastric mill rhythm. Thus sensory feedback to projection neurons can be gated as a function of the modulatory state of an active motor system, not simply switched on/off with the onset of motor activity.NEW & NOTEWORTHY Sensory feedback influences motor systems (i.e., motor circuits and their projection neuron inputs). However, whether regulation of sensory feedback to these projection neurons is consistent across different versions of the same motor pattern driven by the same motor system was not known. We found that gating of sensory feedback to projection neurons is determined by the modulatory state of the motor system, and not simply by whether the system is active or inactive.
Collapse
Affiliation(s)
- Rachel S White
- Department of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania
| | | | - Michael P Nusbaum
- Department of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania
| | - Dawn M Blitz
- Department of Biology, Miami University, Oxford, Ohio; and
| |
Collapse
|
16
|
Oh H, Kim J, Kim J, Kim T, Lee S, Bovik AC. Enhancement of Visual Comfort and Sense of Presence on Stereoscopic 3D Images. IEEE TRANSACTIONS ON IMAGE PROCESSING : A PUBLICATION OF THE IEEE SIGNAL PROCESSING SOCIETY 2017; 26:3789-3801. [PMID: 28499997 DOI: 10.1109/tip.2017.2702383] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Conventional stereoscopic 3D (S3D) displays do not provide accommodation depth cues of the 3D image or video contents being viewed. The sense of content depths is thus limited to cues supplied by motion parallax (for 3D video), stereoscopic vergence cues created by presenting left and right views to the respective eyes, and other contextual and perspective depth cues. The absence of accommodation cues can induce two kinds of accommodation vergence mismatches (AVM) at the fixation and peripheral points, which can result in severe visual discomfort. With the aim of alleviating discomfort arising from AVM, we propose a new visual comfort enhancement approach for processing S3D visual signals to deliver a more comfortable 3D viewing experience at the display. This is accomplished via an optimization process whereby a predictive indicator of visual discomfort is minimized, while still aiming to maintain the viewer's sense of 3D presence by performing a suitable parallax shift, and by directed blurring of the signal. Our processing framework is defined on 3D visual coordinates that reflect the nonuniform resolution of retinal sensors and that uses a measure of 3D saliency strength. An appropriate level of blur that corresponds to the degree of parallax shift is found, making it possible to produce synthetic accommodation cues implemented using a perceptively relevant filter. By this method, AVM, the primary contributor to the discomfort felt when viewing S3D images, is reduced. We show via a series of subjective experiments that the proposed approach improves visual comfort while preserving the sense of 3D presence.
Collapse
|
17
|
|
18
|
Givon LE, Lazar AA. Neurokernel: An Open Source Platform for Emulating the Fruit Fly Brain. PLoS One 2016; 11:e0146581. [PMID: 26751378 PMCID: PMC4709234 DOI: 10.1371/journal.pone.0146581] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2015] [Accepted: 12/18/2015] [Indexed: 11/23/2022] Open
Abstract
We have developed an open software platform called Neurokernel for collaborative development of comprehensive models of the brain of the fruit fly Drosophila melanogaster and their execution and testing on multiple Graphics Processing Units (GPUs). Neurokernel provides a programming model that capitalizes upon the structural organization of the fly brain into a fixed number of functional modules to distinguish between these modules' local information processing capabilities and the connectivity patterns that link them. By defining mandatory communication interfaces that specify how data is transmitted between models of each of these modules regardless of their internal design, Neurokernel explicitly enables multiple researchers to collaboratively model the fruit fly's entire brain by integration of their independently developed models of its constituent processing units. We demonstrate the power of Neurokernel's model integration by combining independently developed models of the retina and lamina neuropils in the fly's visual system and by demonstrating their neuroinformation processing capability. We also illustrate Neurokernel's ability to take advantage of direct GPU-to-GPU data transfers with benchmarks that demonstrate scaling of Neurokernel's communication performance both over the number of interface ports exposed by an emulation's constituent modules and the total number of modules comprised by an emulation.
Collapse
Affiliation(s)
- Lev E. Givon
- Department of Electrical Engineering, Columbia University, New York, NY 10027, United States of America
| | - Aurel A. Lazar
- Department of Electrical Engineering, Columbia University, New York, NY 10027, United States of America
| |
Collapse
|
19
|
Motor and somatosensory abnormalities are significant etiological factors for adolescent idiopathic scoliosis. J Neurol Sci 2015; 359:117-23. [PMID: 26671099 DOI: 10.1016/j.jns.2015.10.048] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2015] [Revised: 10/13/2015] [Accepted: 10/28/2015] [Indexed: 11/22/2022]
Abstract
OBJECTIVE In adolescent idiopathic scoliosis (AIS), we explore the role of lateralized motor and somatosensory abnormalities as a possible etiological factor. METHODS Intraoperative transcranial electrical stimulation was performed in 15 AIS and 14 adult degenerative scoliosis (ADS) patients. Inter-side motor output balance (MOB) by comparing the ratios of right to left motor evoked potentials (MEP) amplitudes, and inter-side motor output excitability (MOE) computed with MEP amplitude, was determined separately for both patients groups. For somatosensory evoked potentials (SSEP), peak to peak P37 amplitudes from right and left lower limb SSEP and inter-side P37 amplitude ratios were obtained. RESULTS Inter-side MOB was significantly asymmetric in AIS patients, contributed mainly by inter-side MOB changes in the upper than the lower limbs. Inter-side MOE comparisons of ipsilateral and contralateral MEP amplitudes were significantly different between AIS and ADS patients. Mean upper limb MEP amplitudes were significantly reduced in AIS patients. Amplitude of the right upper limb MEPs were positively correlated with inter-side MEP ratio. AIS patients show larger mean MEP amplitudes on the same side as the scoliotic curve. Overall, no correlation of Cobb's angle or total levels of scoliosis involvement with inter-side MOB and MOE parameters was found. Inter-side SSEP ratios were significantly higher in AIS patients. CONCLUSIONS Primary dysfunctional and distributed motor output contributing to abnormalities of inter-side MOB and MOE changes involving the upper limbs is evident in AIS. Simultaneous but independent somatosensory and motor observations seen these patients suggest a central mechanism as an etiological factor.
Collapse
|
20
|
Dasgupta S, Goldschmidt D, Wörgötter F, Manoonpong P. Distributed recurrent neural forward models with synaptic adaptation and CPG-based control for complex behaviors of walking robots. Front Neurorobot 2015; 9:10. [PMID: 26441629 PMCID: PMC4585172 DOI: 10.3389/fnbot.2015.00010] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2015] [Accepted: 08/31/2015] [Indexed: 11/24/2022] Open
Abstract
Walking animals, like stick insects, cockroaches or ants, demonstrate a fascinating range of locomotive abilities and complex behaviors. The locomotive behaviors can consist of a variety of walking patterns along with adaptation that allow the animals to deal with changes in environmental conditions, like uneven terrains, gaps, obstacles etc. Biological study has revealed that such complex behaviors are a result of a combination of biomechanics and neural mechanism thus representing the true nature of embodied interactions. While the biomechanics helps maintain flexibility and sustain a variety of movements, the neural mechanisms generate movements while making appropriate predictions crucial for achieving adaptation. Such predictions or planning ahead can be achieved by way of internal models that are grounded in the overall behavior of the animal. Inspired by these findings, we present here, an artificial bio-inspired walking system which effectively combines biomechanics (in terms of the body and leg structures) with the underlying neural mechanisms. The neural mechanisms consist of (1) central pattern generator based control for generating basic rhythmic patterns and coordinated movements, (2) distributed (at each leg) recurrent neural network based adaptive forward models with efference copies as internal models for sensory predictions and instantaneous state estimations, and (3) searching and elevation control for adapting the movement of an individual leg to deal with different environmental conditions. Using simulations we show that this bio-inspired approach with adaptive internal models allows the walking robot to perform complex locomotive behaviors as observed in insects, including walking on undulated terrains, crossing large gaps, leg damage adaptations, as well as climbing over high obstacles. Furthermore, we demonstrate that the newly developed recurrent network based approach to online forward models outperforms the adaptive neuron forward models, which have hitherto been the state of the art, to model a subset of similar walking behaviors in walking robots.
Collapse
Affiliation(s)
- Sakyasingha Dasgupta
- Institute for Physics - Biophysics, George-August-University Göttingen, Germany ; Bernstein Center for Computational Neuroscience, George-August-University Göttingen, Germany ; Laboratory for Neural Computation and Adaptation, Riken Brain Science Institute Saitama, Japan
| | - Dennis Goldschmidt
- Bernstein Center for Computational Neuroscience, George-August-University Göttingen, Germany
| | - Florentin Wörgötter
- Institute for Physics - Biophysics, George-August-University Göttingen, Germany ; Bernstein Center for Computational Neuroscience, George-August-University Göttingen, Germany
| | - Poramate Manoonpong
- Bernstein Center for Computational Neuroscience, George-August-University Göttingen, Germany ; CBR, Embodied AI and Neurorobotics Lab, The Mærsk Mc-Kinney Møller Institute, University of Southern Denmark Odense, Denmark
| |
Collapse
|
21
|
Boeddeker N, Mertes M, Dittmar L, Egelhaaf M. Bumblebee Homing: The Fine Structure of Head Turning Movements. PLoS One 2015; 10:e0135020. [PMID: 26352836 PMCID: PMC4564262 DOI: 10.1371/journal.pone.0135020] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2014] [Accepted: 07/17/2015] [Indexed: 11/18/2022] Open
Abstract
Changes in flight direction in flying insects are largely due to roll, yaw and pitch rotations of their body. Head orientation is stabilized for most of the time by counter rotation. Here, we use high-speed video to analyse head- and body-movements of the bumblebee Bombus terrestris while approaching and departing from a food source located between three landmarks in an indoor flight-arena. The flight paths consist of almost straight flight segments that are interspersed with rapid turns. These short and fast yaw turns ("saccades") are usually accompanied by even faster head yaw turns that change gaze direction. Since a large part of image rotation is thereby reduced to brief instants of time, this behavioural pattern facilitates depth perception from visual motion parallax during the intersaccadic intervals. The detailed analysis of the fine structure of the bees' head turning movements shows that the time course of single head saccades is very stereotypical. We find a consistent relationship between the duration, peak velocity and amplitude of saccadic head movements, which in its main characteristics resembles the so-called "saccadic main sequence" in humans. The fact that bumblebee head saccades are highly stereotyped as in humans, may hint at a common principle, where fast and precise motor control is used to reliably reduce the time during which the retinal images moves.
Collapse
Affiliation(s)
- Norbert Boeddeker
- Department of Neurobiology & Center of Excellence ‘Cognitive Interaction Technology’ (CITEC), Bielefeld University, Bielefeld, Germany
- Department of Cognitive Neurosciences & Center of Excellence ‘Cognitive Interaction Technology’ (CITEC), Bielefeld University, Bielefeld, Germany
| | - Marcel Mertes
- Department of Neurobiology & Center of Excellence ‘Cognitive Interaction Technology’ (CITEC), Bielefeld University, Bielefeld, Germany
| | - Laura Dittmar
- Department of Neurobiology & Center of Excellence ‘Cognitive Interaction Technology’ (CITEC), Bielefeld University, Bielefeld, Germany
| | - Martin Egelhaaf
- Department of Neurobiology & Center of Excellence ‘Cognitive Interaction Technology’ (CITEC), Bielefeld University, Bielefeld, Germany
| |
Collapse
|
22
|
Neural dynamics for landmark orientation and angular path integration. Nature 2015; 521:186-91. [PMID: 25971509 PMCID: PMC4704792 DOI: 10.1038/nature14446] [Citation(s) in RCA: 392] [Impact Index Per Article: 43.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2014] [Accepted: 04/09/2015] [Indexed: 12/11/2022]
Abstract
Many animals navigate using a combination of visual landmarks and path integration. In mammalian brains, head direction cells integrate these two streams of information by representing an animal's heading relative to landmarks, yet maintaining their directional tuning in darkness based on self-motion cues. Here we use two-photon calcium imaging in head-fixed flies walking on a ball in a virtual reality arena to demonstrate that landmark-based orientation and angular path integration are combined in the population responses of neurons whose dendrites tile the ellipsoid body — a toroidal structure in the center of the fly brain. The population encodes the fly's azimuth relative to its environment, tracking visual landmarks when available and relying on self-motion cues in darkness. When both visual and self-motion cues are absent, a representation of the animal's orientation is maintained in this network through persistent activity — a potential substrate for short-term memory. Several features of the population dynamics of these neurons and their circular anatomical arrangement are suggestive of ring attractors — network structures proposed to support the function of navigational brain circuits.
Collapse
|
23
|
Noise-robust recognition of wide-field motion direction and the underlying neural mechanisms in Drosophila melanogaster. Sci Rep 2015; 5:10253. [PMID: 25974721 PMCID: PMC4431354 DOI: 10.1038/srep10253] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2014] [Accepted: 04/08/2015] [Indexed: 12/03/2022] Open
Abstract
Appropriate and robust behavioral control in a noisy environment is important for the survival of most organisms. Understanding such robust behavioral control has been an attractive subject in neuroscience research. Here, we investigated the processing of wide-field motion with random dot noise at both the behavioral and neuronal level in Drosophila melanogaster. We measured the head yaw optomotor response (OMR) and the activity of motion-sensitive neurons, horizontal system (HS) cells, with in vivo whole-cell patch clamp recordings at various levels of noise intensity. We found that flies had a robust sensation of motion direction under noisy conditions, while membrane potential changes of HS cells were not correlated with behavioral responses. By applying signal classification theory to the distributions of HS cell responses, however, we found that motion direction under noise can be clearly discriminated by HS cells, and that this discrimination performance was quantitatively similar to that of OMR. Furthermore, we successfully reproduced HS cell activity in response to noisy motion stimuli with a local motion detector model including a spatial filter and threshold function. This study provides evidence for the physiological basis of noise-robust behavior in a tiny insect brain.
Collapse
|
24
|
Carvalho MJA, Mirth CK. Coordinating morphology with behavior during development: an integrative approach from a fly perspective. Front Ecol Evol 2015. [DOI: 10.3389/fevo.2015.00005] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
|
25
|
Internal models direct dragonfly interception steering. Nature 2014; 517:333-8. [PMID: 25487153 DOI: 10.1038/nature14045] [Citation(s) in RCA: 150] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2014] [Accepted: 11/06/2014] [Indexed: 11/08/2022]
Abstract
Sensorimotor control in vertebrates relies on internal models. When extending an arm to reach for an object, the brain uses predictive models of both limb dynamics and target properties. Whether invertebrates use such models remains unclear. Here we examine to what extent prey interception by dragonflies (Plathemis lydia), a behaviour analogous to targeted reaching, requires internal models. By simultaneously tracking the position and orientation of a dragonfly's head and body during flight, we provide evidence that interception steering is driven by forward and inverse models of dragonfly body dynamics and by models of prey motion. Predictive rotations of the dragonfly's head continuously track the prey's angular position. The head-body angles established by prey tracking appear to guide systematic rotations of the dragonfly's body to align it with the prey's flight path. Model-driven control thus underlies the bulk of interception steering manoeuvres, while vision is used for reactions to unexpected prey movements. These findings illuminate the computational sophistication with which insects construct behaviour.
Collapse
|
26
|
Seeds AM, Ravbar P, Chung P, Hampel S, Midgley FM, Mensh BD, Simpson JH. A suppression hierarchy among competing motor programs drives sequential grooming in Drosophila. eLife 2014; 3:e02951. [PMID: 25139955 PMCID: PMC4136539 DOI: 10.7554/elife.02951] [Citation(s) in RCA: 123] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
Abstract
Motor sequences are formed through the serial execution of different movements, but how nervous systems implement this process remains largely unknown. We determined the organizational principles governing how dirty fruit flies groom their bodies with sequential movements. Using genetically targeted activation of neural subsets, we drove distinct motor programs that clean individual body parts. This enabled competition experiments revealing that the motor programs are organized into a suppression hierarchy; motor programs that occur first suppress those that occur later. Cleaning one body part reduces the sensory drive to its motor program, which relieves suppression of the next movement, allowing the grooming sequence to progress down the hierarchy. A model featuring independently evoked cleaning movements activated in parallel, but selected serially through hierarchical suppression, was successful in reproducing the grooming sequence. This provides the first example of an innate motor sequence implemented by the prevailing model for generating human action sequences. DOI:http://dx.doi.org/10.7554/eLife.02951.001 Anyone who has ever lived with a cat is familiar with its grooming behavior. This innate behavior follows a particular sequence as the cat methodically cleans its body parts one-by-one. Many animals also have grooming habits, even insects such as fruit flies. The fact that grooming sequences are seen across such different species suggests that this behavior is important for survival. Nevertheless, how the brain organizes grooming sequences, or other behaviors that involve a sequence of tasks, is not well understood. Fruit flies make a good model for studying grooming behavior for a couple of reasons. First, they are fastidious cleaners. When coated with dust they will faithfully carry out a series of cleaning tasks to clean each body part. Second, there are many genetic tools and techniques that researchers can use to manipulate the fruit flies' behaviors. One technique allows specific brain cells to be targeted and activated to trigger particular behaviors. Seeds et al. used these sophisticated techniques, computer modeling, and behavioral observations to uncover how the brains of fruit flies orchestrate a grooming sequence. Dust-covered flies follow a predictable sequence of cleaning tasks: beginning by using their front legs to clean their eyes, they then clean their antennae and head. This likely helps to protect their sensory organs. Next, they move on to the abdomen, possibly to ensure that dust doesn't interfere with their ability to breathe. Wings and thorax follow last. Periodically, the flies stop to rub their legs together to remove any accumulated dust before resuming the cleaning sequence. Seeds et al. activated different sets of brain cells one-by-one to see if they could trigger a particular grooming task and found that individual cleaning tasks could be triggered, in the absence of dust, by stimulating a specific group of brain cells. This suggests each cleaning task is a discrete behavior controlled by a subset of cells. Then Seeds et al. tried to stimulate more than one cleaning behavior at a time; they discovered that wing-cleaning suppressed thorax-cleaning, abdomen-cleaning suppressed both of these, and head-cleaning suppressed all the others. This suggests that a ‘hierarchy’ exists in the brain that exactly matches the sequence that flies normally follow as they clean their body parts. By learning more about how the brain coordinates grooming sequences, the findings of Seeds et al. may also provide insights into other behaviors that involve a sequence of tasks, such as nest building in animals or typing in humans. Following on from this work, one of the next challenges will be to see if such behaviors also use a ‘suppression hierarchy’ to ensure that individual tasks are carried out in the right order. DOI:http://dx.doi.org/10.7554/eLife.02951.002
Collapse
Affiliation(s)
- Andrew M Seeds
- Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Primoz Ravbar
- Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Phuong Chung
- Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Stefanie Hampel
- Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Frank M Midgley
- Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Brett D Mensh
- Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Julie H Simpson
- Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| |
Collapse
|
27
|
Guo P, Pollack AJ, Varga AG, Martin JP, Ritzmann RE. Extracellular wire tetrode recording in brain of freely walking insects. J Vis Exp 2014. [PMID: 24747699 DOI: 10.3791/51337] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022] Open
Abstract
Increasing interest in the role of brain activity in insect motor control requires that we be able to monitor neural activity while insects perform natural behavior. We previously developed a technique for implanting tetrode wires into the central complex of cockroach brains that allowed us to record activity from multiple neurons simultaneously while a tethered cockroach turned or altered walking speed. While a major advance, tethered preparations provide access to limited behaviors and often lack feedback processes that occur in freely moving animals. We now present a modified version of that technique that allows us to record from the central complex of freely moving cockroaches as they walk in an arena and deal with barriers by turning, climbing or tunneling. Coupled with high speed video and cluster cutting, we can now relate brain activity to various parameters of the movement of freely behaving insects.
Collapse
Affiliation(s)
- Peiyuan Guo
- Department of Biology, Case Western Reserve University
| | | | | | | | | |
Collapse
|
28
|
Serotonin receptors expressed in Drosophila mushroom bodies differentially modulate larval locomotion. PLoS One 2014; 9:e89641. [PMID: 24586928 PMCID: PMC3934909 DOI: 10.1371/journal.pone.0089641] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2013] [Accepted: 01/25/2014] [Indexed: 12/20/2022] Open
Abstract
Drosophila melanogaster has been successfully used as a simple model to study the cellular and molecular mechanisms underlying behaviors, including the generation of motor programs. Thus, it has been shown that, as in vertebrates, CNS biogenic amines (BA) including serotonin (5HT) participate in motor control in Drosophila. Several evidence show that BA systems innervate an important association area in the insect brain previously associated to the planning and/or execution of motor programs, the Mushroom Bodies (MB). The main objective of this work is to evaluate the contribution of 5HT and its receptors expressed in MB to motor behavior in fly larva. Locomotion was evaluated using an automated tracking system, in Drosophila larvae (3rd-instar) exposed to drugs that affect the serotonergic neuronal transmission: alpha-methyl-L-dopa, MDMA and fluoxetine. In addition, animals expressing mutations in the 5HT biosynthetic enzymes or in any of the previously identified receptors for this amine (5HT1AR, 5HT1BR, 5HT2R and 5HT7R) were evaluated in their locomotion. Finally, RNAi directed to the Drosophila 5HT receptor transcripts were expressed in MB and the effect of this manipulation on motor behavior was assessed. Data obtained in the mutants and in animals exposed to the serotonergic drugs, suggest that 5HT systems are important regulators of motor programs in fly larvae. Studies carried out in animals pan-neuronally expressing the RNAi for each of the serotonergic receptors, support this idea and further suggest that CNS 5HT pathways play a role in motor control. Moreover, animals expressing an RNAi for 5HT1BR, 5HT2R and 5HT7R in MB show increased motor behavior, while no effect is observed when the RNAi for 5HT1AR is expressed in this region. Thus, our data suggest that CNS 5HT systems are involved in motor control, and that 5HT receptors expressed in MB differentially modulate motor programs in fly larvae.
Collapse
|
29
|
Guo P, Ritzmann RE. Neural activity in the central complex of the cockroach brain is linked to turning behaviors. ACTA ACUST UNITED AC 2012. [PMID: 23197098 DOI: 10.1242/jeb.080473] [Citation(s) in RCA: 78] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
An animal moving through complex terrain must consider sensory cues around it and alter its movements accordingly. In the arthropod brain, the central complex (CC) receives highly preprocessed sensory information and sends outputs to premotor regions, suggesting that it may play a role in the central control of oriented locomotion. We performed tetrode recordings within the CC in cockroaches walking on an air-suspended ball to examine the role of the CC in turning behaviors. When a rod was placed near the cockroach's head, the cockroach touched the rod repeatedly with one or both antennae before locomotion was initiated. Some CC units responded to self-generated antennal contact with the object, but at lower levels compared with externally imposed antennal stimulation. The neural activity of other CC units responded to locomotion. We found that some CC units showed discrete firing fields corresponding to specific locomotion states. We also found that changes in firing rate of some CC units preceded changes in turning speed in one direction but not the other. Furthermore, such biased units were located in the side of the brain ipsilateral to the direction of the turning speed they could predict. Moreover, electrical stimulation of the CC elicited or modified locomotion, and the direction of some evoked locomotion could be predicted by the response property of locomotion-predictive units near the stimulation site. Therefore, our results suggest that, at the population level, asymmetrical activity in the CC precedes and influences turning behavior.
Collapse
Affiliation(s)
- Peiyuan Guo
- Case Western Reserve University, 2080 Adelbert Road, DeGrace 214, Cleveland, OH 44106, USA.
| | | |
Collapse
|
30
|
Warzecha AK, Rosner R, Grewe J. Impact and sources of neuronal variability in the fly's motion vision pathway. ACTA ACUST UNITED AC 2012. [PMID: 23178476 DOI: 10.1016/j.jphysparis.2012.10.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
Nervous systems encode information about dynamically changing sensory input by changes in neuronal activity. Neuronal activity changes, however, also arise from noise sources within and outside the nervous system or from changes of the animal's behavioral state. The resulting variability of neuronal responses in representing sensory stimuli limits the reliability with which animals can respond to stimuli and may thus even affect the chances for survival in certain situations. Relevant sources of noise arising at different stages along the motion vision pathway have been investigated from the sensory input to the initiation of behavioral reactions. Here, we concentrate on the reliability of processing visual motion information in flies. Flies rely on visual motion information to guide their locomotion. They are among the best established model systems for the processing of visual motion information allowing us to bridge the gap between behavioral performance and underlying neuronal computations. It has been possible to directly assess the consequences of noise at major stages of the fly's visual motion processing system on the reliability of neuronal signals. Responses of motion sensitive neurons and their variability have been related to optomotor movements as indicators for the overall performance of visual motion computation. We address whether and how noise already inherent in the stimulus, e.g. photon noise for the visual system, influences later processing stages and to what extent variability at the output level of the sensory system limits behavioral performance. Recent advances in circuit analysis and the progress in monitoring neuronal activity in behaving animals should now be applied to understand how the animal meets the requirements of fast and reliable manoeuvres in naturalistic situations.
Collapse
Affiliation(s)
| | - Ronny Rosner
- Tierphysiologie, Philipps-Universität Marburg, 35032 Marburg, Germany
| | - Jan Grewe
- Dept. Biology II, Ludwig-Maximilians Univ., 82152 Martinsried, Germany
| |
Collapse
|
31
|
Gomez-Marin A, Partoune N, Stephens GJ, Louis M. Automated tracking of animal posture and movement during exploration and sensory orientation behaviors. PLoS One 2012; 7:e41642. [PMID: 22912674 PMCID: PMC3415430 DOI: 10.1371/journal.pone.0041642] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2011] [Accepted: 06/28/2012] [Indexed: 11/18/2022] Open
Abstract
BACKGROUND The nervous functions of an organism are primarily reflected in the behavior it is capable of. Measuring behavior quantitatively, at high-resolution and in an automated fashion provides valuable information about the underlying neural circuit computation. Accordingly, computer-vision applications for animal tracking are becoming a key complementary toolkit to genetic, molecular and electrophysiological characterization in systems neuroscience. METHODOLOGY/PRINCIPAL FINDINGS We present Sensory Orientation Software (SOS) to measure behavior and infer sensory experience correlates. SOS is a simple and versatile system to track body posture and motion of single animals in two-dimensional environments. In the presence of a sensory landscape, tracking the trajectory of the animal's sensors and its postural evolution provides a quantitative framework to study sensorimotor integration. To illustrate the utility of SOS, we examine the orientation behavior of fruit fly larvae in response to odor, temperature and light gradients. We show that SOS is suitable to carry out high-resolution behavioral tracking for a wide range of organisms including flatworms, fishes and mice. CONCLUSIONS/SIGNIFICANCE Our work contributes to the growing repertoire of behavioral analysis tools for collecting rich and fine-grained data to draw and test hypothesis about the functioning of the nervous system. By providing open-access to our code and documenting the software design, we aim to encourage the adaptation of SOS by a wide community of non-specialists to their particular model organism and questions of interest.
Collapse
Affiliation(s)
- Alex Gomez-Marin
- European Molecular Biology Laboratory/Center for Genomic Regulation Systems Biology Unit, Center for Genomic Regulation & Universitat Pompeu Fabra, Barcelona, Spain
| | - Nicolas Partoune
- European Molecular Biology Laboratory/Center for Genomic Regulation Systems Biology Unit, Center for Genomic Regulation & Universitat Pompeu Fabra, Barcelona, Spain
- Department of Electrical Engineering and Computer Science, Université de Liège, Liege Sart-Tilman, Belgium
| | - Greg J. Stephens
- Joseph Henry Laboratories of Physics & Lewis-Sigler Institute for Integrative Genomics Princeton University, Princeton, New Jersey, United States of America
| | - Matthieu Louis
- European Molecular Biology Laboratory/Center for Genomic Regulation Systems Biology Unit, Center for Genomic Regulation & Universitat Pompeu Fabra, Barcelona, Spain
| |
Collapse
|
32
|
Ritzmann RE, Harley CM, Daltorio KA, Tietz BR, Pollack AJ, Bender JA, Guo P, Horomanski AL, Kathman ND, Nieuwoudt C, Brown AE, Quinn RD. Deciding which way to go: how do insects alter movements to negotiate barriers? Front Neurosci 2012; 6:97. [PMID: 22783160 PMCID: PMC3390555 DOI: 10.3389/fnins.2012.00097] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2012] [Accepted: 06/13/2012] [Indexed: 11/13/2022] Open
Abstract
Animals must routinely deal with barriers as they move through their natural environment. These challenges require directed changes in leg movements and posture performed in the context of ever changing internal and external conditions. In particular, cockroaches use a combination of tactile and visual information to evaluate objects in their path in order to effectively guide their movements in complex terrain. When encountering a large block, the insect uses its antennae to evaluate the object’s height then rears upward accordingly before climbing. A shelf presents a choice between climbing and tunneling that depends on how the antennae strike the shelf; tapping from above yields climbing, while tapping from below causes tunneling. However, ambient light conditions detected by the ocelli can bias that decision. Similarly, in a T-maze turning is determined by antennal contact but influenced by visual cues. These multi-sensory behaviors led us to look at the central complex as a center for sensori-motor integration within the insect brain. Visual and antennal tactile cues are processed within the central complex and, in tethered preparations, several central complex units changed firing rates in tandem with or prior to altered step frequency or turning, while stimulation through the implanted electrodes evoked these same behavioral changes. To further test for a central complex role in these decisions, we examined behavioral effects of brain lesions. Electrolytic lesions in restricted regions of the central complex generated site specific behavioral deficits. Similar changes were also found in reversible effects of procaine injections in the brain. Finally, we are examining these kinds of decisions made in a large arena that more closely matches the conditions under which cockroaches forage. Overall, our studies suggest that CC circuits may indeed influence the descending commands associated with navigational decisions, thereby making them more context dependent.
Collapse
Affiliation(s)
- Roy E Ritzmann
- Department of Biology, Case Western Reserve University Cleveland, OH, USA
| | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|