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Deng H, Wang F, Wu Q, Sun H, Ma J, Ni R, Li Z, Zhang L, Zhang J, Liu M. Novel Multiresistant Osmotin-like Protein from Sweetpotato as a Promising Biofungicide to Control Ceratocystis fimbriata by Destroying Spores through Accumulation of Reactive Oxygen Species. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:1487-1499. [PMID: 38215405 DOI: 10.1021/acs.jafc.3c07663] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2024]
Abstract
Osmotin-like proteins (OLPs) play an important role in host-plant defense. In this study, a novel multiresistant OLP (IbOLP1) was screened from sweetpotato (Ipomoea batatas) with a molecular weight of 26.3 kDa. The expression level of IbOLP1 was significantly higher in resistant cultivars than susceptible ones after inoculation with Ceratocystis fimbriata, which causes black rot disease in sweetpotato. The expression of IbOLP1 in Pichia pastoris led to the lysis of yeast cells themselves. The recombinant IbOLP1 displayed antifungal, antibacterial, and antinematode activity and stability. IbOLP1 could restrain the mycelial growth and lyse spores of C. fimbriata, distinctly reducing the incidence of black rot in sweetpotato. The IbOLP1 can trigger the apoptosis of black rot spores by elevating the intracellular levels of reactive oxygen species. Collectively, these findings suggest that IbOLP1 can be used to develop natural antimicrobial resources instead of chemical agents and generate new, disease-resistant germplasm.
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Affiliation(s)
- Huangyue Deng
- Department of Plant Biology, School of Life Sciences, Jiangsu Normal University, Xuzhou, Jiangsu Province 221116, China
| | - Fangrui Wang
- Department of Plant Biology, School of Life Sciences, Jiangsu Normal University, Xuzhou, Jiangsu Province 221116, China
| | - Qian Wu
- Department of Plant Biology, School of Life Sciences, Jiangsu Normal University, Xuzhou, Jiangsu Province 221116, China
| | - Houjun Sun
- Xuzhou Institute of Agricultural Sciences in Jiangsu, Xuhuai District, Xuzhou, Jiangsu Province 221131, China
| | - Jukui Ma
- Xuzhou Institute of Agricultural Sciences in Jiangsu, Xuhuai District, Xuzhou, Jiangsu Province 221131, China
| | - Rui Ni
- Department of Plant Biology, School of Life Sciences, Jiangsu Normal University, Xuzhou, Jiangsu Province 221116, China
| | - Zongyun Li
- Department of Plant Biology, School of Life Sciences, Jiangsu Normal University, Xuzhou, Jiangsu Province 221116, China
| | - Liming Zhang
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong Province 250100, China
| | - Jian Zhang
- Department of Plant Biology, School of Life Sciences, Jiangsu Normal University, Xuzhou, Jiangsu Province 221116, China
| | - Meiyan Liu
- Department of Plant Biology, School of Life Sciences, Jiangsu Normal University, Xuzhou, Jiangsu Province 221116, China
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Li X, Sun Y, Yuan X, Ma Z, Hong Y, Chen S. Impact of Cucurbita moschata Resistant Rootstocks on Cucumis sativus Fruit and Meloidogyne incognita Development. PLANT DISEASE 2023; 107:3851-3857. [PMID: 37272044 DOI: 10.1094/pdis-02-22-0319-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Plant grafting can provide resistance to nematodes. There is a distinct need to determine the role of Meloidogyne incognita-resistant rootstocks on the growth and quality of grafted cucumber plants. Cucumber (Cucumis sativus L.) cultivar Jinchun No. 4 (J) was hole grafted onto the pumpkin (Cucurbita moschata) cultivars Xiuli (X), Banzhen No. 3 (B), and its root to generate JX, JB, and JJ plants. The histopathology and M. incognita development associated with JX, JB, and JJ were analyzed under incubator and high plastic tunnel conditions. Under incubator conditions, M. incognita root galls and egg mass indices associated with the JX and JB resistant rootstocks were significantly (P < 0.05) lower than those associated with JJ susceptible rootstocks. In addition, the number of eggs were 73.3 ± 8.8% and 85.3 ± 7.7% less, respectively. The number of second-stage juveniles (J2s) in JX roots decreased by 57.1 ± 9.2% compared with that in JJ, and the giant cell and J2 development were poor in JX and JB roots. In pot experiments under a high plastic tunnel, plant height, stem diameter, leaf area, and yield of M. incognita-infected JX plants were not significantly different from those of noninoculated control. There was no significant difference in fruit weight, length, firmness, soluble solids, and color among the three grafted plants. The yield per JB plant was increased compared with that of JJ, irrespective of nematode presence. In the M. incognita-infested soil experiment in a high plastic tunnel, the yield per JX and JB plant were significantly higher than JJ (P < 0.05). Thus, the pumpkin rootstock Xiuli and Banzhen No. 3 are promising rootstocks for managing M. incognita without affecting cucumber fruit quality. Grafting provides a good basis for studying the defense mechanism of rootstocks against M. incognita.
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Affiliation(s)
- Xuzhen Li
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling 712100, China
| | - Yinhui Sun
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling 712100, China
| | - Xin Yuan
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling 712100, China
| | - Zhaoyang Ma
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling 712100, China
| | - Yuanyuan Hong
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling 712100, China
| | - Shuxia Chen
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling 712100, China
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3
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Kumar A, Joshi I, Changwal C, Sirohi A, Jain PK. Host-delivered RNAi-mediated silencing of the root-knot nematode (Meloidogyne incognita) effector genes, Mi-msp10 and Mi-msp23, confers resistance in Arabidopsis and impairs reproductive ability of the root-knot nematode. PLANTA 2022; 256:74. [PMID: 36083352 DOI: 10.1007/s00425-022-03977-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2022] [Accepted: 08/18/2022] [Indexed: 06/15/2023]
Abstract
Mi-msp10 and Mi-msp23 effector genes play a significant role during Meloidogyne incognita parasitism on Arabidopsis roots. The role of these genes was confirmed by demonstrating the decrease of the level of susceptibility of Arabidopsis by the silencing of Mi-msp10 and Mi-msp23 genes using HD-RNAi technology. Root-knot nematodes (RKNs) are the most damaging pathogens severely affecting global food production. The sustainable options to minimize menace of nematode populations through economically feasible measures are limited. Thus, the development of innovative and target-specific strategies that aid in their management is imperative. RNAi technology has emerged as a sustainable and target-specific alternative to control phytonematodes. Here, we characterized two novel subventral gland and dorsal gland-specific effectors, Mi-msp10 and Mi-msp23, to determine their potential effectiveness in controlling M. incognita. Comparative developmental profiling using qRT-PCR revealed higher expression of both effectors in the adult nematode female. Furthermore, functional evaluation of Mi-msp10 and Mi-msp23 dsRNA cassettes was performed using host-delivered RNAi (HD-RNAi) in Arabidopsis. The transgenic lines were examined against M. incognita, and the phenotypic effect of HD-RNAi was evident with a 61% and 51% reduction in gall formation in the Mi-msp10 and Mi-msp23 RNAi lines, respectively. A significant drop in the nematode adult females by 59% for Mi-msp10 and 49% for Mi-msp23-RNAi lines was observed. Similarly, production in egg masses decreased significantly by 76% (Mi-msp10) and 60% (Mi-msp23) for the RNAi lines, which eventually decreased the reproductive factor by 92% and 75%, respectively. The gene expression analysis showed a significant decrease in the transcript level by up to 72% (Mi-msp10) and 66% (Mi-msp23) in M. incognita females feeding on RNAi lines, providing further evidence of effective gene silencing. Overall, our findings provide useful information and support further development of RNAi-based strategies to control M. incognita.
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Affiliation(s)
- Anil Kumar
- ICAR-National Institute for Plant Biotechnology, New Delhi, 110012, India
| | - Ila Joshi
- ICAR-National Institute for Plant Biotechnology, New Delhi, 110012, India
| | - Chunoti Changwal
- ICAR-IARI, Division of Plant Physiology, New Delhi, 110012, India
| | - Anil Sirohi
- ICAR-IARI, Division of Nematology, New Delhi, 110012, India
| | - Pradeep K Jain
- ICAR-National Institute for Plant Biotechnology, New Delhi, 110012, India.
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Abstract
Resistance to the soybean cyst nematode (SCN) is a topic incorporating multiple mechanisms and multiple types of science. It is also a topic of substantial agricultural importance, as SCN is estimated to cause more yield damage than any other pathogen of soybean, one of the world's main food crops. Both soybean and SCN have experienced jumps in experimental tractability in the past decade, and significant advances have been made. The rhg1-b locus, deployed on millions of farm acres, has been durable and will remain important, but local SCN populations are gradually evolving to overcome rhg1-b. Multiple other SCN resistance quantitative trait loci (QTL) of proven value are now in play with soybean breeders. QTL causal gene discovery and mechanistic insights into SCN resistance are contributing to both basic and applied disciplines. Additional understanding of SCN and other cyst nematodes will also grow in importance and lead to novel disease control strategies.
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Affiliation(s)
- Andrew F Bent
- Department of Plant Pathology, University of Wisconsin-Madison, Madison, Wisconsin, USA;
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Schleker ASS, Rist M, Matera C, Damijonaitis A, Collienne U, Matsuoka K, Habash SS, Twelker K, Gutbrod O, Saalwächter C, Windau M, Matthiesen S, Stefanovska T, Scharwey M, Marx MT, Geibel S, Grundler FMW. Mode of action of fluopyram in plant-parasitic nematodes. Sci Rep 2022; 12:11954. [PMID: 35831379 PMCID: PMC9279378 DOI: 10.1038/s41598-022-15782-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 06/29/2022] [Indexed: 11/10/2022] Open
Abstract
Plant-parasitic nematodes (PPN) are responsible for severe yield losses in crop production. Management is challenging as effective and safe means are rare. Recently, it has been discovered that the succinate dehydrogenase (SDH) inhibitor fluopyram is highly effective against PPN while accompanying an excellent safety profile. Here we show that fluopyram is a potent inhibitor of SDH in nematodes but not in mammals, insects and earthworm, explaining the selectivity on molecular level. As a consequence of SDH inhibition, fluopyram impairs ATP generation and causes paralysis in PPN and Caenorhabditis elegans. Interestingly, efficacy differences of fluopyram amongst PPN species can be observed. Permanent exposure to micromolar to nanomolar amounts of fluopyram prevents Meloidogyne spp. and Heterodera schachtii infection and their development at the root. Preincubation of Meloidogyne incognita J2 with fluopyram followed by a recovery period effectively reduces gall formation. However, the same procedure does not inhibit H. schachtii infection and development. Sequence comparison of sites relevant for ligand binding identified amino acid differences in SDHC which likely mediate selectivity, coincidently revealing a unique amino acid difference within SDHC conserved among Heterodera spp. Docking and C. elegans mutant studies suggest that this minute difference mediates altered sensitivity of H. schachtii towards fluopyram.
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Affiliation(s)
- A Sylvia S Schleker
- Molecular Phytomedicine, University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany.
| | - Marc Rist
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany.
| | - Christiane Matera
- Molecular Phytomedicine, University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
| | - Arunas Damijonaitis
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Ursel Collienne
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Koichi Matsuoka
- Molecular Phytomedicine, University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
| | - Samer S Habash
- Molecular Phytomedicine, University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
- BASF Vegetable Seeds, Napoleonsweg 152, 6083 AB, Nunhem, The Netherlands
| | - Katja Twelker
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Oliver Gutbrod
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Corinna Saalwächter
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Maren Windau
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Svend Matthiesen
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Tatyana Stefanovska
- Department of Entomology, National University of Life and Environmental Sciences, Kyiv, 03041, Ukraine
| | - Melanie Scharwey
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Michael T Marx
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Sven Geibel
- Research and Development, CropScience Division, Bayer AG, Alfred-Nobel-Str.50, 40789, Monheim am Rhein, Germany
| | - Florian M W Grundler
- Molecular Phytomedicine, University of Bonn, Karlrobert-Kreiten-Straße 13, 53115, Bonn, Germany
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6
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Li X, Sun Y, Yang Y, Yang X, Xue W, Wu M, Chen P, Weng Y, Chen S. Transcriptomic and Histological Analysis of the Response of Susceptible and Resistant Cucumber to Meloidogyne incognita Infection Revealing Complex Resistance via Multiple Signaling Pathways. FRONTIERS IN PLANT SCIENCE 2021; 12:675429. [PMID: 34194451 PMCID: PMC8236822 DOI: 10.3389/fpls.2021.675429] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2021] [Accepted: 05/18/2021] [Indexed: 05/24/2023]
Abstract
The root-knot nematode (RKN), Meloidogyne incognita, is a devastating pathogen for cucumber (Cucumis sativus L.) specially in production under protected environments or continuous cropping. High level RKN resistance has been identified in African horned melon Cucumis metuliferus (CM). However, the resistance mechanism remains unclear. In this study, the comparative analysis on phenotypic and transcriptomic responses in the susceptible cucumber inbred line Q24 and the resistant CM, after M. incognita infection, was performed. The results showed that, in comparison with Q24, the CM was able to significantly reduce penetration numbers of second stage juveniles (J2), slow its development in the roots resulting in fewer galls and smaller giant cells suggesting the presence of host resistance in CM. Comparative transcriptomes analysis of Q24 and CM before and after M. incognita infection was conducted and differentially expressed genes (DEGs) associated with host resistance were identified in CM. Enrichment analyses revealed most enriched DEGs in Ca2+ signaling, salicylic acid (SA)/jamonate signaling (JA), as well as auxin (IAA) signaling pathways. In particular, in CM, DEGs in the Ca2+ signaling pathway such as those for the calmodulin and calcium-binding proteins were upregulated at the early stage of M. incognita infection; genes for SA/JA synthesis/signal transduction were markedly activated, whereas the IAA signaling pathway genes were inhibited upon infection suggesting the importance of SA/JA signaling pathways in mediating M. incognita resistance in CM. A model was established to explain the different molecular mechanisms on M. incognita susceptibility in cucumber and resistance to M. incognita infection in CM.
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Affiliation(s)
- Xvzhen Li
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling, China
| | - Yinhui Sun
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling, China
| | - Yuting Yang
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling, China
| | - Xiaopei Yang
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling, China
| | - Wanyu Xue
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling, China
| | - Meiqian Wu
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling, China
| | - Panpan Chen
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling, China
| | - Yiqun Weng
- United States Department of Agriculture, Agriculture Research Service, Vegetable Crops Research Unit, Horticulture Department, University of Wisconsin, Madison, WI, United States
| | - Shuxia Chen
- College of Horticulture, Northwest A&F University/Shaanxi Engineering Research Center for Vegetables, Yangling, China
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Zinovieva SV, Udalova ZV, Seiml-Buchinger VV, Khasanov FK. Gene Expression of Protease Inhibitors in Tomato Plants with Invasion by Root-Knot Nematode Meloidogyne incognita and Modulation of Their Activity with Salicylic and Jasmonic Acids. BIOL BULL+ 2021. [DOI: 10.1134/s1062359021020175] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Abstract—
The expression of the genes encoding the inhibitors of serine (ISP) and cysteine proteinases (ICP) was studied in the roots of tomato plants resistant and susceptible to the root-knot nematode Meloidogyne incognita during infection and under the effects of signaling molecules: salicylic (SA) and jasmonic (JA) acids. It was shown that, upon infection, resistant plants are characterized by an increased accumulation of transcripts of the ICP and ISP genes at the stages of penetration and development in the roots, while the level of transcription does not change in susceptible plants. There was a significant decrease in nematode invasion in susceptible plants after treatment with SA or JA compared to untreated plants, which makes it possible to determine the role of the studied proteinase inhibitors in resistance induced by signaling molecules. It was revealed that an increase in expression of the genes of proteinase inhibitors is accompanied by inhibition of the reproductive potential and size of M. incognita females, as well as by a decrease in plant infection.
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8
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Touray M, Cimen H, Gulsen SH, Ulug D, Erdogus D, Shapiro-Ilan D, Hazir S. The impact of chemical nematicides on entomopathogenic nematode survival and infectivity. J Nematol 2021. [DOI: 10.21307/jofnem-2021-049] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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Costa SR, Chin S, Mathesius U. Infection of Medicago truncatula by the Root-Knot Nematode Meloidogyne javanica Does Not Require Early Nodulation Genes. FRONTIERS IN PLANT SCIENCE 2020; 11:1050. [PMID: 32733526 PMCID: PMC7363973 DOI: 10.3389/fpls.2020.01050] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2020] [Accepted: 06/25/2020] [Indexed: 05/27/2023]
Abstract
Because of the developmental similarities between root nodules induced by symbiotic rhizobia and root galls formed by parasitic nematodes, we investigated the involvement of nodulation genes in the infection of Medicago truncatula by the root knot nematode (RKN), Meloidogyne javanica. We found that gall formation, including giant cell formation, pericycle and cortical cell division, as well as egg laying, occurred successfully in the non-nodulating mutants nfp1 (nod factor perception1), nin1 (nodule inception1) and nsp2 (nodulation signaling pathway2) and the cytokinin perception mutant cre1 (cytokinin receptor1). Gall and egg formation were significantly reduced in the ethylene insensitive, hypernodulating mutant skl (sickle), and to a lesser extent, in the low nodulation, abscisic acid insensitive mutant latd/nip (lateral root-organ defective/numerous infections and polyphenolics). Despite its supernodulation phenotype, the sunn4 (super numeric nodules4) mutant, which has lost the ability to autoregulate nodule numbers, did not form excessive numbers of galls. Co-inoculation of roots with nematodes and rhizobia significantly reduced nodule numbers compared to rhizobia-only inoculated roots, but only in the hypernodulation mutant skl. Thus, this effect is likely to be influenced by ethylene signaling, but is not likely explained by resource competition between galls and nodules. Co-inoculation with rhizobia also reduced gall numbers compared to nematode-only infected roots, but only in the wild type. Therefore, the protective effect of rhizobia on nematode infection does not clearly depend on nodule number or on Nod factor signaling. Our study demonstrates that early nodulation genes that are essential for successful nodule development are not necessary for nematode-induced gall formation, that gall formation is not under autoregulation of nodulation control, and that ethylene signaling plays a positive role in successful RKN parasitism in M. truncatula.
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Affiliation(s)
- Sofia R. Costa
- Division of Plant Sciences, Research School of Biology, Australian National University, Canberra, ACT, Australia
- CBMA—Centre of Molecular and Environmental Biology, Department of Biology, University of Minho, Braga, Portugal
| | - Sabrina Chin
- Division of Plant Sciences, Research School of Biology, Australian National University, Canberra, ACT, Australia
| | - Ulrike Mathesius
- Division of Plant Sciences, Research School of Biology, Australian National University, Canberra, ACT, Australia
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10
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Khan MR, Sharma RK. Fusarium-nematode wilt disease complexes, etiology and mechanism of development. ACTA ACUST UNITED AC 2020. [DOI: 10.1007/s42360-020-00240-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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11
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Chaudhary S, Dutta TK, Tyagi N, Shivakumara TN, Papolu PK, Chobhe KA, Rao U. Host-induced silencing of Mi-msp-1 confers resistance to root-knot nematode Meloidogyne incognita in eggplant. Transgenic Res 2019; 28:327-340. [PMID: 30955133 DOI: 10.1007/s11248-019-00126-5] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2019] [Accepted: 04/02/2019] [Indexed: 11/28/2022]
Abstract
RNA interference (RNAi)-based host-induced gene silencing (HIGS) is emerging as a novel, efficient and target-specific tool to combat phytonematode infection in crop plants. Mi-msp-1, an effector gene expressed in the subventral pharyngeal gland cells of Meloidogyne incognita plays an important role in the parasitic process. Mi-msp-1 effector is conserved in few of the species of root-knot nematodes (RKNs) and does not share considerable homology with the other phytonematodes, thereby making it a suitable target for HIGS with minimal off-target effects. Six putative eggplant transformants harbouring a single copy RNAi transgene of Mi-msp-1 was generated. Stable expression of the transgene was detected in T1, T2 and T3 transgenic lines for which a detrimental effect on RKN penetration, development and reproduction was documented upon challenge infection with nematode juveniles. The post-parasitic nematode stages extracted from the transgenic plants showed long-term RNAi effect in terms of targeted downregulation of Mi-msp-1. These findings suggest that HIGS of Mi-msp-1 enhances nematode resistance in eggplant and protect the plant against RKN parasitism at very early stage.
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Affiliation(s)
- Sonam Chaudhary
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.,School of Biotechnology, Kalinga Institute of Industrial Technology, Bhubaneswar, 751024, India
| | - Tushar K Dutta
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Nidhi Tyagi
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India
| | | | - Pradeep K Papolu
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Kapil A Chobhe
- Division of Soil Science and Agricultural Chemistry, New Delhi, 110012, India
| | - Uma Rao
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
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12
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Abstract
Efficient plant protoplast production from cell suspension cultures, leaf, and stem tissue allows for single-cell plant biology. Since protoplasts do not have cell walls, they can be readily transformed to enable rapid assessment of regulatory elements, synthetic constructs, gene expression, and more recently genome-editing tools and approaches. Historically, enzymatic cell wall digestion has been both expensive and laborious. Protoplast production, transformation, and analysis of fluorescence have recently been automated using an integrated robotic system. Here we describe its use for bulk protoplast isolation, counting, transformation, and analysis at very low cost for high-throughput experiments.
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Affiliation(s)
- Scott C Lenaghan
- Department of Food Science, University of Tennessee, Knoxville, TN, USA.
- Department of Mechanical, Aerospace, and Biomedical Engineering, University of Tennessee, Knoxville, TN, USA.
| | - C Neal Stewart
- Department of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
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13
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Coyne DL, Cortada L, Dalzell JJ, Claudius-Cole AO, Haukeland S, Luambano N, Talwana H. Plant-Parasitic Nematodes and Food Security in Sub-Saharan Africa. ANNUAL REVIEW OF PHYTOPATHOLOGY 2018; 56:381-403. [PMID: 29958072 PMCID: PMC7340484 DOI: 10.1146/annurev-phyto-080417-045833] [Citation(s) in RCA: 82] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Sub-Saharan Africa (SSA) is a region beset with challenges, not least its ability to feed itself. Low agricultural productivity, exploding populations, and escalating urbanization have led to declining per capita food availability. In order to reverse this trend, crop production systems must intensify, which brings with it an elevated threat from pests and diseases, including plant-parasitic nematodes. A holistic systems approach to pest management recognizes disciplinary integration. However, a critical under-representation of nematology expertise is a pivotal shortcoming, especially given the magnitude of the threat nematodes pose under more intensified systems. With more volatile climates, efficient use of water by healthy root systems is especially crucial. Within SSA, smallholder farming systems dominate the agricultural landscape, where a limited understanding of nematode problems prevails. This review provides a synopsis of current nematode challenges facing SSA and presents the opportunities to overcome current shortcomings, including a means to increase nematology capacity.
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Affiliation(s)
- Danny L Coyne
- International Institute of Tropical Agriculture, Kasarani, Nairobi, Kenya;
| | - Laura Cortada
- International Institute of Tropical Agriculture, Kasarani, Nairobi, Kenya;
| | - Johnathan J Dalzell
- Queen's University Belfast, School of Biological Sciences, Medical Biology Centre, Belfast, BT9 7BL, United Kingdom
| | - Abiodun O Claudius-Cole
- Department of Crop Protection and Environmental Biology, University of Ibadan, Ibadan, Nigeria
| | - Solveig Haukeland
- International Centre for Insect Physiology and Ecology, Kasarani, Nairobi, Kenya
| | | | - Herbert Talwana
- Department of Agricultural Production, School of Agricultural Sciences, Makerere University, Kampala, Uganda
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Sun H, Li H, Wang J, Song G. Synthesis and nematicidal activity of piperazinedione derivatives based on the natural product Barettin. CHINESE CHEM LETT 2018. [DOI: 10.1016/j.cclet.2017.10.015] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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15
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Knight AL, Light DM, Judd GJR, Witzgall P. Pear Ester – From Discovery to Delivery for Improved Codling Moth Management. ACS SYMPOSIUM SERIES 2018. [DOI: 10.1021/bk-2018-1294.ch008] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Affiliation(s)
- Alan L. Knight
- Temperate Tree Fruit and Vegetable Research, Agricultural Research Service, U.S. Department of Agriculture, 5230 Konnowac Pass Road, Wapato, Washington 98951, United States
| | - Douglas M. Light
- Foodborne Toxin Detection and Prevention Research Unit, Western Regional Research Center, Agricultural Research Service, U.S. Department of Agriculture, 800 Buchanan Street, Albany California 94710, United States
| | - Gary J. R. Judd
- Agriculture and Agri-Food Canada, Summerland Research and Development Centre, 4200 Highway 97, Summerland, British Columbia, Canada
| | - Peter Witzgall
- Division of Chemical Ecology, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, Alnarp, Sweden
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Ali MA, Azeem F, Abbas A, Joyia FA, Li H, Dababat AA. Transgenic Strategies for Enhancement of Nematode Resistance in Plants. FRONTIERS IN PLANT SCIENCE 2017; 8:750. [PMID: 28536595 PMCID: PMC5422515 DOI: 10.3389/fpls.2017.00750] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2017] [Accepted: 04/21/2017] [Indexed: 05/19/2023]
Abstract
Plant parasitic nematodes (PPNs) are obligate biotrophic parasites causing serious damage and reduction in crop yields. Several economically important genera parasitize various crop plants. The root-knot, root lesion, and cyst nematodes are the three most economically damaging genera of PPNs on crops within the family Heteroderidae. It is very important to devise various management strategies against PPNs in economically important crop plants. Genetic engineering has proven a promising tool for the development of biotic and abiotic stress tolerance in crop plants. Additionally, the genetic engineering leading to transgenic plants harboring nematode resistance genes has demonstrated its significance in the field of plant nematology. Here, we have discussed the use of genetic engineering for the development of nematode resistance in plants. This review article also provides a detailed account of transgenic strategies for the resistance against PPNs. The strategies include natural resistance genes, cloning of proteinase inhibitor coding genes, anti-nematodal proteins and use of RNA interference to suppress nematode effectors. Furthermore, the manipulation of expression levels of genes induced and suppressed by nematodes has also been suggested as an innovative approach for inducing nematode resistance in plants. The information in this article will provide an array of possibilities to engineer resistance against PPNs in different crop plants.
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Affiliation(s)
- Muhammad A. Ali
- Department of Plant Pathology, University of AgricultureFaisalabad, Pakistan
- Centre of Agricultural Biochemistry and Biotechnology, University of AgricultureFaisalabad, Pakistan
| | - Farrukh Azeem
- Department of Bioinformatics and Biotechnology, Government College UniversityFaisalabad, Pakistan
| | - Amjad Abbas
- Department of Plant Pathology, University of AgricultureFaisalabad, Pakistan
| | - Faiz A. Joyia
- Centre of Agricultural Biochemistry and Biotechnology, University of AgricultureFaisalabad, Pakistan
| | - Hongjie Li
- National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural SciencesBeijing, China
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Shivakumara TN, Chaudhary S, Kamaraju D, Dutta TK, Papolu PK, Banakar P, Sreevathsa R, Singh B, Manjaiah KM, Rao U. Host-Induced Silencing of Two Pharyngeal Gland Genes Conferred Transcriptional Alteration of Cell Wall-Modifying Enzymes of Meloidogyne incognita vis-à-vis Perturbed Nematode Infectivity in Eggplant. FRONTIERS IN PLANT SCIENCE 2017; 8:473. [PMID: 28424727 PMCID: PMC5371666 DOI: 10.3389/fpls.2017.00473] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2017] [Accepted: 03/17/2017] [Indexed: 05/19/2023]
Abstract
The complex parasitic strategy of Meloidogyne incognita appears to involve simultaneous expression of its pharyngeal gland-specific effector genes in order to colonize the host plants. Research reports related to effector crosstalk in phytonematodes for successful parasitism of the host tissue is yet underexplored. In view of this, we have used in planta effector screening approach to understand the possible interaction of pioneer genes (msp-18 and msp-20, putatively involved in late and early stage of M. incognita parasitism, respectively) with other unrelated effectors such as cell-wall modifying enzymes (CWMEs) in M. incognita. Host-induced gene silencing (HIGS) strategy was used to generate the transgenic eggplants expressing msp-18 and msp-20, independently. Putative transformants were characterized via qRT-PCR and Southern hybridization assay. SiRNAs specific to msp-18 and msp-20 were also detected in the transformants via Northern hybridization assay. Transgenic expression of the RNAi constructs of msp-18 and msp-20 genes resulted in 43.64-69.68% and 41.74-67.30% reduction in M. incognita multiplication encompassing 6 and 10 events, respectively. Additionally, transcriptional oscillation of CWMEs documented in the penetrating and developing nematodes suggested the possible interaction among CWMEs and pioneer genes. The rapid assimilation of plant-derived carbon by invading nematodes was also demonstrated using 14C isotope probing approach. Our data suggests that HIGS of msp-18 and msp-20, improves nematode resistance in eggplant by affecting the steady-state transcription level of CWME genes in invading nematodes, and safeguard the plant against nematode invasion at very early stage because nematodes may become the recipient of bioactive RNA species during the process of penetration into the plant root.
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Affiliation(s)
- Tagginahalli N. Shivakumara
- Division of Nematology, Indian Council of Agricultural Research – Indian Agricultural Research InstituteNew Delhi, India
| | - Sonam Chaudhary
- Division of Nematology, Indian Council of Agricultural Research – Indian Agricultural Research InstituteNew Delhi, India
| | - Divya Kamaraju
- Division of Nematology, Indian Council of Agricultural Research – Indian Agricultural Research InstituteNew Delhi, India
| | - Tushar K. Dutta
- Division of Nematology, Indian Council of Agricultural Research – Indian Agricultural Research InstituteNew Delhi, India
| | - Pradeep K. Papolu
- Division of Nematology, Indian Council of Agricultural Research – Indian Agricultural Research InstituteNew Delhi, India
| | - Prakash Banakar
- Division of Nematology, Indian Council of Agricultural Research – Indian Agricultural Research InstituteNew Delhi, India
| | - Rohini Sreevathsa
- Indian Council of Agricultural Research – National Research Centre on Plant BiotechnologyNew Delhi, India
| | - Bhupinder Singh
- Nuclear Research Laboratory, Indian Council of Agricultural Research – Indian Agricultural Research InstituteNew Delhi, India
| | - K. M. Manjaiah
- Division of Soil Science and Agricultural Chemistry, Indian Council of Agricultural Research – Indian Agricultural Research InstituteNew Delhi, India
| | - Uma Rao
- Division of Nematology, Indian Council of Agricultural Research – Indian Agricultural Research InstituteNew Delhi, India
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18
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Dlugosz EM, Lenaghan SC, Stewart CN. A Robotic Platform for High-throughput Protoplast Isolation and Transformation. J Vis Exp 2016:54300. [PMID: 27768035 PMCID: PMC5092064 DOI: 10.3791/54300] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Over the last decade there has been a resurgence in the use of plant protoplasts that range from model species to crop species, for analysis of signal transduction pathways, transcriptional regulatory networks, gene expression, genome-editing, and gene-silencing. Furthermore, significant progress has been made in the regeneration of plants from protoplasts, which has generated even more interest in the use of these systems for plant genomics. In this work, a protocol has been developed for automation of protoplast isolation and transformation from a 'Bright Yellow' 2 (BY-2) tobacco suspension culture using a robotic platform. The transformation procedures were validated using an orange fluorescent protein (OFP) reporter gene (pporRFP) under the control of the Cauliflower mosaic virus 35S promoter (35S). OFP expression in protoplasts was confirmed by epifluorescence microscopy. Analyses also included protoplast production efficiency methods using propidium iodide. Finally, low-cost food-grade enzymes were used for the protoplast isolation procedure, circumventing the need for lab-grade enzymes that are cost-prohibitive in high-throughput automated protoplast isolation and analysis. Based on the protocol developed in this work, the complete procedure from protoplast isolation to transformation can be conducted in under 4 hr, without any input from the operator. While the protocol developed in this work was validated with the BY-2 cell culture, the procedures and methods should be translatable to any plant suspension culture/protoplast system, which should enable acceleration of crop genomics research.
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Affiliation(s)
| | - Scott C Lenaghan
- Center for Renewable Carbon, University of Tennessee, Knoxville; Department of Mechanical, Aerospace, and Biomedical Engineering, University of Tennessee, Knoxville;
| | - C Neal Stewart
- Department of Plant Sciences, University of Tennessee, Knoxville
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19
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Wen AM, Steinmetz NF. Design of virus-based nanomaterials for medicine, biotechnology, and energy. Chem Soc Rev 2016; 45:4074-126. [PMID: 27152673 PMCID: PMC5068136 DOI: 10.1039/c5cs00287g] [Citation(s) in RCA: 246] [Impact Index Per Article: 30.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
This review provides an overview of recent developments in "chemical virology." Viruses, as materials, provide unique nanoscale scaffolds that have relevance in chemical biology and nanotechnology, with diverse areas of applications. Some fundamental advantages of viruses, compared to synthetically programmed materials, include the highly precise spatial arrangement of their subunits into a diverse array of shapes and sizes and many available avenues for easy and reproducible modification. Here, we will first survey the broad distribution of viruses and various methods for producing virus-based nanoparticles, as well as engineering principles used to impart new functionalities. We will then examine the broad range of applications and implications of virus-based materials, focusing on the medical, biotechnology, and energy sectors. We anticipate that this field will continue to evolve and grow, with exciting new possibilities stemming from advancements in the rational design of virus-based nanomaterials.
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Affiliation(s)
- Amy M Wen
- Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH 44106, USA.
| | - Nicole F Steinmetz
- Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH 44106, USA. and Department of Radiology, Case Western Reserve University, Cleveland, OH 44106, USA and Department of Materials Science and Engineering, Case Western Reserve University, Cleveland, OH 44106, USA and Department of Macromolecular Science and Engineering, Case Western Reserve University, Cleveland, OH 44106, USA and Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH 44106, USA
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20
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Synthesis of novel 1,2,3-triazole-containing pyridine–pyrazole amide derivatives based on one-pot click reaction and their evaluation for potent nematicidal activity against Meloidogyne incognita. RESEARCH ON CHEMICAL INTERMEDIATES 2015. [DOI: 10.1007/s11164-015-2381-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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21
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Barbary A, Djian-Caporalino C, Palloix A, Castagnone-Sereno P. Host genetic resistance to root-knot nematodes, Meloidogyne spp., in Solanaceae: from genes to the field. PEST MANAGEMENT SCIENCE 2015; 71:1591-1598. [PMID: 26248710 DOI: 10.1002/ps.4091] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2015] [Revised: 08/04/2015] [Accepted: 08/05/2015] [Indexed: 06/04/2023]
Abstract
Root-knot nematodes (RKNs) heavily damage most solanaceous crops worldwide. Fortunately, major resistance genes are available in a number of plant species, and their use provides a safe and economically relevant strategy for RKN control. From a structural point of view, these genes often harbour NBS-LRR motifs (i.e. a nucleotide binding site and a leucine rich repeat region near the carboxy terminus) and are organised in syntenic clusters in solanaceous genomes. Their introgression from wild to cultivated plants remains a challenge for breeders, although facilitated by marker-assisted selection. As shown with other pathosystems, the genetic background into which the resistance genes are introgressed is of prime importance to both the expression of the resistance and its durability, as exemplified by the recent discovery of quantitative trait loci conferring quantitative resistance to RKNs in pepper. The deployment of resistance genes at a large scale may result in the emergence and spread of virulent nematode populations able to overcome them, as already reported in tomato and pepper. Therefore, careful management of the resistance genes available in solanaceous crops is crucial to avoid significant reduction in the duration of RKN genetic control in the field. From that perspective, only rational management combining breeding and cultivation practices will allow the design and implementation of innovative, sustainable crop production systems that protect the resistance genes and maintain their durability.
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Affiliation(s)
- Arnaud Barbary
- INRA, Institut Sophia Agrobiotech, Sophia Antipolis, France
- Université de Nice Sophia Antipolis, Institut Sophia Agrobiotech, Sophia Antipolis, France
- CNRS, Institut Sophia Agrobiotech, Sophia Antipolis, France
| | - Caroline Djian-Caporalino
- INRA, Institut Sophia Agrobiotech, Sophia Antipolis, France
- Université de Nice Sophia Antipolis, Institut Sophia Agrobiotech, Sophia Antipolis, France
- CNRS, Institut Sophia Agrobiotech, Sophia Antipolis, France
| | - Alain Palloix
- INRA, Génétique et Amélioration des Fruits et Légumes, Montfavet Cedex, France
| | - Philippe Castagnone-Sereno
- INRA, Institut Sophia Agrobiotech, Sophia Antipolis, France
- Université de Nice Sophia Antipolis, Institut Sophia Agrobiotech, Sophia Antipolis, France
- CNRS, Institut Sophia Agrobiotech, Sophia Antipolis, France
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22
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Fan W, Wei Z, Zhang M, Ma P, Liu G, Zheng J, Guo X, Zhang P. Resistance to Ditylenchus destructor Infection in Sweet Potato by the Expression of Small Interfering RNAs Targeting unc-15, a Movement-Related Gene. PHYTOPATHOLOGY 2015; 105:1458-65. [PMID: 26034810 DOI: 10.1094/phyto-04-15-0087-r] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Stem nematode (Ditylenchus destructor) is one of most serious diseases that limit the productivity and quality of sweet potato (Ipomoea batatas), a root crop with worldwide importance for food security and nutrition improvement. Hence, there is a global demand for developing sweet potato varieties that are resistant to the disease. In this study, we have investigated the interference of stem nematode infectivity by the expression of small interfering RNAs (siRNAs) in transgenic sweet potato that are homologous to the unc-15 gene, which affects the muscle protein paramyosin of the pathogen. The production of double-stranded RNAs and siRNAs in transgenic lines with a single transgene integration event was verified by Northern blot analysis. The expression of unc-15 was reduced dramatically in stem nematodes collected from the inoculated storage roots of transgenic plants, and the infection areas of their storage roots were dramatically smaller than that of wild-type (WT). Compared with the WT, the transgenic plants showed increased yield in the stem nematode-infested field. Our results demonstrate that the expression of siRNAs targeting the unc-15 gene of D. destructor is an effective approach in improving stem nematode resistance in sweet potato, in adjunct with the global integrated pest management programs.
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Affiliation(s)
- Weijuan Fan
- First, second, third, and eighth authors: National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China; fourth and seventh authors: Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, 50 Zhongling Street, Nanjing 210014, China; fifth and sixth authors: Tai'an Academy of Agricultural Science, 16 Tailai Road, Tai'an, Shandong 271000, China; and eighth author: Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, 3888 Chenhua Road, Shanghai 201602, China
| | - Zhaorong Wei
- First, second, third, and eighth authors: National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China; fourth and seventh authors: Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, 50 Zhongling Street, Nanjing 210014, China; fifth and sixth authors: Tai'an Academy of Agricultural Science, 16 Tailai Road, Tai'an, Shandong 271000, China; and eighth author: Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, 3888 Chenhua Road, Shanghai 201602, China
| | - Min Zhang
- First, second, third, and eighth authors: National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China; fourth and seventh authors: Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, 50 Zhongling Street, Nanjing 210014, China; fifth and sixth authors: Tai'an Academy of Agricultural Science, 16 Tailai Road, Tai'an, Shandong 271000, China; and eighth author: Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, 3888 Chenhua Road, Shanghai 201602, China
| | - Peiyong Ma
- First, second, third, and eighth authors: National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China; fourth and seventh authors: Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, 50 Zhongling Street, Nanjing 210014, China; fifth and sixth authors: Tai'an Academy of Agricultural Science, 16 Tailai Road, Tai'an, Shandong 271000, China; and eighth author: Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, 3888 Chenhua Road, Shanghai 201602, China
| | - Guiling Liu
- First, second, third, and eighth authors: National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China; fourth and seventh authors: Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, 50 Zhongling Street, Nanjing 210014, China; fifth and sixth authors: Tai'an Academy of Agricultural Science, 16 Tailai Road, Tai'an, Shandong 271000, China; and eighth author: Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, 3888 Chenhua Road, Shanghai 201602, China
| | - Jianli Zheng
- First, second, third, and eighth authors: National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China; fourth and seventh authors: Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, 50 Zhongling Street, Nanjing 210014, China; fifth and sixth authors: Tai'an Academy of Agricultural Science, 16 Tailai Road, Tai'an, Shandong 271000, China; and eighth author: Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, 3888 Chenhua Road, Shanghai 201602, China
| | - Xiaoding Guo
- First, second, third, and eighth authors: National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China; fourth and seventh authors: Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, 50 Zhongling Street, Nanjing 210014, China; fifth and sixth authors: Tai'an Academy of Agricultural Science, 16 Tailai Road, Tai'an, Shandong 271000, China; and eighth author: Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, 3888 Chenhua Road, Shanghai 201602, China
| | - Peng Zhang
- First, second, third, and eighth authors: National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China; fourth and seventh authors: Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, 50 Zhongling Street, Nanjing 210014, China; fifth and sixth authors: Tai'an Academy of Agricultural Science, 16 Tailai Road, Tai'an, Shandong 271000, China; and eighth author: Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, 3888 Chenhua Road, Shanghai 201602, China
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Wever CM, Farrington D, Dent JA. The Validation of Nematode-Specific Acetylcholine-Gated Chloride Channels as Potential Anthelmintic Drug Targets. PLoS One 2015; 10:e0138804. [PMID: 26393923 PMCID: PMC4578888 DOI: 10.1371/journal.pone.0138804] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2015] [Accepted: 09/03/2015] [Indexed: 01/06/2023] Open
Abstract
New compounds are needed to treat parasitic nematode infections in humans, livestock and plants. Small molecule anthelmintics are the primary means of nematode parasite control in animals; however, widespread resistance to the currently available drug classes means control will be impossible without the introduction of new compounds. Adverse environmental effects associated with nematocides used to control plant parasitic species are also motivating the search for safer, more effective compounds. Discovery of new anthelmintic drugs in particular has been a serious challenge due to the difficulty of obtaining and culturing target parasites for high-throughput screens and the lack of functional genomic techniques to validate potential drug targets in these pathogens. We present here a novel strategy for target validation that employs the free-living nematode Caenorhabditis elegans to demonstrate the value of new ligand-gated ion channels as targets for anthelmintic discovery. Many successful anthelmintics, including ivermectin, levamisole and monepantel, are agonists of pentameric ligand-gated ion channels, suggesting that the unexploited pentameric ion channels encoded in parasite genomes may be suitable drug targets. We validated five members of the nematode-specific family of acetylcholine-gated chloride channels as targets of agonists with anthelmintic properties by ectopically expressing an ivermectin-gated chloride channel, AVR-15, in tissues that endogenously express the acetylcholine-gated chloride channels and using the effects of ivermectin to predict the effects of an acetylcholine-gated chloride channel agonist. In principle, our strategy can be applied to validate any ion channel as a putative anti-parasitic drug target.
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Affiliation(s)
- Claudia M. Wever
- Department of Biology, McGill University, Montreal, Quebec, Canada
| | | | - Joseph A. Dent
- Department of Biology, McGill University, Montreal, Quebec, Canada
- * E-mail:
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24
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Cabrera J, Díaz-Manzano FE, Barcala M, Arganda-Carreras I, de Almeida-Engler J, Engler G, Fenoll C, Escobar C. Phenotyping nematode feeding sites: three-dimensional reconstruction and volumetric measurements of giant cells induced by root-knot nematodes in Arabidopsis. THE NEW PHYTOLOGIST 2015; 206:868-80. [PMID: 25613856 DOI: 10.1111/nph.13249] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2014] [Accepted: 11/19/2014] [Indexed: 05/08/2023]
Abstract
The control of plant parasitic nematodes is an increasing problem. A key process during the infection is the induction of specialized nourishing cells, called giant cells (GCs), in roots. Understanding the function of genes required for GC development is crucial to identify targets for new control strategies. We propose a standardized method for GC phenotyping in different plant genotypes, like those with modified genes essential for GC development. The method combines images obtained by bright-field microscopy from the complete serial sectioning of galls with TrakEM2, specialized three-dimensional (3D) reconstruction software for biological structures. The volumes and shapes from 162 3D models of individual GCs induced by Meloidogyne javanica in Arabidopsis were analyzed for the first time along their life cycle. A high correlation between the combined volume of all GCs within a gall and the total area occupied by all the GCs in the section/s where they show maximum expansion, and a proof of concept from two Arabidopsis transgenic lines (J0121 ≫ DTA and J0121 ≫ GFP) demonstrate the reliability of the method. We phenotyped GCs and developed a reliable simplified method based on a two-dimensional (2D) parameter for comparison of GCs from different Arabidopsis genotypes, which is also applicable to galls from different plant species and in different growing conditions, as thickness/transparency is not a restriction.
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Affiliation(s)
- Javier Cabrera
- Facultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Av. Carlos III s/n, E-45071, Toledo, Spain
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25
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Dutta TK, Papolu PK, Banakar P, Choudhary D, Sirohi A, Rao U. Tomato transgenic plants expressing hairpin construct of a nematode protease gene conferred enhanced resistance to root-knot nematodes. Front Microbiol 2015; 6:260. [PMID: 25883594 PMCID: PMC4381642 DOI: 10.3389/fmicb.2015.00260] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2015] [Accepted: 03/16/2015] [Indexed: 11/13/2022] Open
Abstract
Root-knot nematodes (Meloidogyne incognita) cause substantial yield losses in vegetables worldwide, and are difficult to manage. Continuous withdrawal of environmentally-harmful nematicides from the global market warrants the need for novel nematode management strategies. Utility of host-delivered RNAi has been demonstrated in several plants (Arabidopsis, tobacco, and soybean) that exhibited resistance against root-knot and cyst nematodes. Herein, a M. incognita-specific protease gene, cathepsin L cysteine proteinase (Mi-cpl-1), was targeted to generate tomato transgenic lines to evaluate the genetically modified nematode resistance. In vitro knockdown of Mi-cpl-1 gene led to the reduced attraction and penetration of M. incognita in tomato, suggesting the involvement of Mi-cpl-1 in nematode parasitism. Transgenic expression of the RNAi construct of Mi-cpl-1 gene resulted in 60-80% reduction in infection and multiplication of M. incognita in tomato. Evidence for in vitro and in vivo silencing of Mi-cpl-1 was confirmed by expression analysis using quantitative PCR. Our study demonstrates that Mi-cpl-1 plays crucial role during plant-nematode interaction and plant-mediated downregulation of this gene elicits detrimental effect on M. incognita development, reinforcing the potential of RNAi technology for management of phytonematodes in crop plants.
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Affiliation(s)
- Tushar K. Dutta
- Division of Nematology, ICAR-Indian Agricultural Research InstituteNew Delhi, India
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26
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Dutta TK, Banakar P, Rao U. The status of RNAi-based transgenic research in plant nematology. Front Microbiol 2015; 5:760. [PMID: 25628609 PMCID: PMC4290618 DOI: 10.3389/fmicb.2014.00760] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2014] [Accepted: 12/12/2014] [Indexed: 11/13/2022] Open
Abstract
With the understanding of nematode-plant interactions at the molecular level, new avenues for engineering resistance have opened up, with RNA interference being one of them. Induction of RNAi by delivering double-stranded RNA (dsRNA) has been very successful in the model non-parasitic nematode, Caenorhabditis elegans, while in plant nematodes, dsRNA delivery has been accomplished by soaking nematodes with dsRNA solution mixed with synthetic neurostimulants. The success of in vitro RNAi of target genes has inspired the use of in planta delivery of dsRNA to feeding nematodes. The most convincing success of host-delivered RNAi has been achieved against root-knot nematodes. Plant-mediated RNAi has been shown to lead to the specific down-regulation of target genes in invading nematodes, which had a profound effect on nematode development. RNAi-based transgenics are advantageous as they do not produce any functional foreign proteins and target organisms in a sequence-specific manner. Although the development of RNAi-based transgenics against plant nematodes is still in the preliminary stage, they offer novel management strategy for the future.
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Affiliation(s)
- Tushar K. Dutta
- Division of Nematology, Indian Agricultural Research InstituteNew Delhi, India
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Li J, Zhang Z, Xu X, Shao X, Li Z. Nematicidal Activities of Diamides with Diphenylacetylene Scaffold Against Meloidogyne Incognita. Aust J Chem 2015. [DOI: 10.1071/ch15065] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
With the goal of searching for new potential nematicides with high activity and low toxicity, new molecules are needed as potential prototypes for the synthesis of new nematicidal compounds. A series of novel diamides based on diphenylacetylene scaffold were designed and synthesised. The conformation of the amide was restricted through the ten-membered H-bonded ring. Their structures were characterised by 1H NMR, 13C NMR, 19F NMR, and high-resolution mass spectrometry. The preliminary bioassays evaluated against Meloidogyne Incognita indicated that most of the title compounds were endowed with moderate-to-good activities at the concentration of 25 mg L–1. In particular, compounds 9a, 9c, 9g, 9h, 9k, and 9l displayed >50 % nematicidal activity at 5 mg L–1. It is possible that the novel diamides with diphenylacetylene scaffold, which possess good nematicidal activities, provide distinct nematicidal chemotypes that can be used as leads for further optimisation.
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Buckingham SD, Partridge FA, Sattelle DB. Automated, high-throughput, motility analysis in Caenorhabditis elegans and parasitic nematodes: Applications in the search for new anthelmintics. Int J Parasitol Drugs Drug Resist 2014; 4:226-32. [PMID: 25516833 PMCID: PMC4266775 DOI: 10.1016/j.ijpddr.2014.10.004] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
The scale of the damage worldwide to human health, animal health and agricultural crops resulting from parasitic nematodes, together with the paucity of treatments and the threat of developing resistance to the limited set of widely-deployed chemical tools, underlines the urgent need to develop novel drugs and chemicals to control nematode parasites. Robust chemical screens which can be automated are a key part of that discovery process. Hitherto, the successful automation of nematode behaviours has been a bottleneck in the chemical discovery process. As the measurement of nematode motility can provide a direct scalar readout of the activity of the neuromuscular system and an indirect measure of the health of the animal, this omission is acute. Motility offers a useful assay for high-throughput, phenotypic drug/chemical screening and several recent developments have helped realise, at least in part, the potential of nematode-based drug screening. Here we review the challenges encountered in automating nematode motility and some important developments in the application of machine vision, statistical imaging and tracking approaches which enable the automated characterisation of nematode movement. Such developments facilitate automated screening for new drugs and chemicals aimed at controlling human and animal nematode parasites (anthelmintics) and plant nematode parasites (nematicides).
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Affiliation(s)
| | | | - David B. Sattelle
- Wolfson Institute for Biomedical Research, Division of Medicine, University College London, Cruciform Building, Gower Street, London WC1E 6BT, United Kingdom
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Genomic characterisation of the effector complement of the potato cyst nematode Globodera pallida. BMC Genomics 2014; 15:923. [PMID: 25342461 PMCID: PMC4213498 DOI: 10.1186/1471-2164-15-923] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2014] [Accepted: 10/13/2014] [Indexed: 01/07/2023] Open
Abstract
Background The potato cyst nematode Globodera pallida has biotrophic interactions with its host. The nematode induces a feeding structure – the syncytium – which it keeps alive for the duration of the life cycle and on which it depends for all nutrients required to develop to the adult stage. Interactions of G. pallida with the host are mediated by effectors, which are produced in two sets of gland cells. These effectors suppress host defences, facilitate migration and induce the formation of the syncytium. Results The recent completion of the G. pallida genome sequence has allowed us to identify the effector complement from this species. We identify 128 orthologues of effectors from other nematodes as well as 117 novel effector candidates. We have used in situ hybridisation to confirm gland cell expression of a subset of these effectors, demonstrating the validity of our effector identification approach. We have examined the expression profiles of all effector candidates using RNAseq; this analysis shows that the majority of effectors fall into one of three clusters of sequences showing conserved expression characteristics (invasive stage nematode only, parasitic stage only or invasive stage and adult male only). We demonstrate that further diversity in the effector pool is generated by alternative splicing. In addition, we show that effectors target a diverse range of structures in plant cells, including the peroxisome. This is the first identification of effectors from any plant pathogen that target this structure. Conclusion This is the first genome scale search for effectors, combined to a life-cycle expression analysis, for any plant-parasitic nematode. We show that, like other phylogenetically unrelated plant pathogens, plant parasitic nematodes deploy hundreds of effectors in order to parasitise plants, with different effectors required for different phases of the infection process. Electronic supplementary material The online version of this article (doi:10.1186/1471-2164-15-923) contains supplementary material, which is available to authorized users.
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Dinh PTY, Brown CR, Elling AA. RNA Interference of Effector Gene Mc16D10L Confers Resistance Against Meloidogyne chitwoodi in Arabidopsis and Potato. PHYTOPATHOLOGY 2014; 104:1098-106. [PMID: 24835223 DOI: 10.1094/phyto-03-14-0063-r] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Meloidogyne chitwoodi, a quarantine pathogen, is a significant problem in potato-producing areas worldwide. In spite of considerable genetic diversity in wild potato species, no commercial potato cultivars with resistance to M. chitwoodi are available. Nematode effector genes are essential for the molecular interactions between root-knot nematodes and their hosts. Stable transgenic lines of Arabidopsis and potato (Solanum tuberosum) with resistance against M. chitwoodi were developed. RNA interference (RNAi) construct pART27(16D10i-2) was introduced into Arabidopsis thaliana and potato to express double-stranded RNA complementary to the putative M. chitwoodi effector gene Mc16D10L. Plant-mediated RNAi led to a significant level of resistance against M. chitwoodi in Arabidopsis and potato. In transgenic Arabidopsis lines, the number of M. chitwoodi egg masses and eggs was reduced by up to 57 and 67% compared with empty vector controls, respectively. Similarly, in stable transgenic lines of potato, the number of M. chitwoodi egg masses and eggs was reduced by up to 71 and 63% compared with empty vector controls, respectively. The relative transcript level of Mc16D10L was reduced by up to 76% in M. chitwoodi eggs and infective second-stage juveniles that developed on transgenic pART27(16D10i-2) potato, suggesting that the RNAi effect is systemic and heritable in M. chitwoodi.
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Cabrera J, Díaz-Manzano FE, Sanchez M, Rosso MN, Melillo T, Goh T, Fukaki H, Cabello S, Hofmann J, Fenoll C, Escobar C. A role for LATERAL ORGAN BOUNDARIES-DOMAIN 16 during the interaction Arabidopsis-Meloidogyne spp. provides a molecular link between lateral root and root-knot nematode feeding site development. THE NEW PHYTOLOGIST 2014; 203:632-645. [PMID: 24803293 DOI: 10.1111/nph.12826] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2014] [Accepted: 03/21/2014] [Indexed: 05/08/2023]
Abstract
Plant endoparasitic nematodes induce the formation of their feeding cells by injecting effectors from the esophageal glands into root cells. Although vascular cylinder cells seem to be involved in the formation of root-knot nematode (RKN) feeding structures, molecular evidence is scarce. We address the role during gall development of LATERAL ORGAN BOUNDARIES-DOMAIN 16 (LBD16), a key component of the auxin pathway leading to the divisions in the xylem pole pericycle (XPP) for lateral root (LR) formation. Arabidopsis T-DNA tagged J0192 and J0121 XPP marker lines, LBD16 and DR5::GUS promoter lines, and isolated J0192 protoplasts were assayed for nematode-dependent gene expression. Infection tests in LBD16 knock-out lines were used for functional analysis. J0192 and J0121 lines were activated in early developing galls and giant cells (GCs), resembling the pattern of the G2/M-transition specific ProC yc B 1;1 :CycB1;1(NT)-GUS line. LBD16 was regulated by auxins in galls as in LRs, and induced by RKN secretions. LBD16 loss of function mutants and a transgenic line with defective XPP cells showed a significantly reduced infection rate. The results show that genes expressed in the dividing XPP, particularly LBD16, are important for gall formation, as they are for LR development.
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Affiliation(s)
- Javier Cabrera
- Facultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Av. Carlos III s/n, E-45071, Toledo, Spain
| | - Fernando E Díaz-Manzano
- Facultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Av. Carlos III s/n, E-45071, Toledo, Spain
| | - María Sanchez
- Facultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Av. Carlos III s/n, E-45071, Toledo, Spain
| | - Marie-Noëlle Rosso
- INRA, Aix-Marseille Université, UMR 1163, Biotechnologie des Champignons Filamenteux, F-13009, Marseille, France
| | - Teresa Melillo
- Istituto per la Protezione de lle Piante, CNR, 70126, Bari, Italy
| | - Tatsuaki Goh
- Department of Biology, Graduate School of Science, Kobe University, 1-1 Rokkodai, Kobe, 657-8501, Japan
| | - Hidehiro Fukaki
- Department of Biology, Graduate School of Science, Kobe University, 1-1 Rokkodai, Kobe, 657-8501, Japan
| | - Susana Cabello
- Division of Plant Protection, Department of Crop Sciences, University of Natural Resources and Applied Life Sciences, Konrad Lorenz Str. 24, Tulln a. d. Donau, A-3430, Austria
| | - Julia Hofmann
- Division of Plant Protection, Department of Crop Sciences, University of Natural Resources and Applied Life Sciences, Konrad Lorenz Str. 24, Tulln a. d. Donau, A-3430, Austria
| | - Carmen Fenoll
- Facultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Av. Carlos III s/n, E-45071, Toledo, Spain
| | - Carolina Escobar
- Facultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Av. Carlos III s/n, E-45071, Toledo, Spain
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Identification of novel target genes for safer and more specific control of root-knot nematodes from a pan-genome mining. PLoS Pathog 2013; 9:e1003745. [PMID: 24204279 PMCID: PMC3814813 DOI: 10.1371/journal.ppat.1003745] [Citation(s) in RCA: 67] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2013] [Accepted: 09/19/2013] [Indexed: 11/27/2022] Open
Abstract
Root-knot nematodes are globally the most aggressive and damaging plant-parasitic nematodes. Chemical nematicides have so far constituted the most efficient control measures against these agricultural pests. Because of their toxicity for the environment and danger for human health, these nematicides have now been banned from use. Consequently, new and more specific control means, safe for the environment and human health, are urgently needed to avoid worldwide proliferation of these devastating plant-parasites. Mining the genomes of root-knot nematodes through an evolutionary and comparative genomics approach, we identified and analyzed 15,952 nematode genes conserved in genomes of plant-damaging species but absent from non target genomes of chordates, plants, annelids, insect pollinators and mollusks. Functional annotation of the corresponding proteins revealed a relative abundance of putative transcription factors in this parasite-specific set compared to whole proteomes of root-knot nematodes. This may point to important and specific regulators of genes involved in parasitism. Because these nematodes are known to secrete effector proteins in planta, essential for parasitism, we searched and identified 993 such effector-like proteins absent from non-target species. Aiming at identifying novel targets for the development of future control methods, we biologically tested the effect of inactivation of the corresponding genes through RNA interference. A total of 15 novel effector-like proteins and one putative transcription factor compatible with the design of siRNAs were present as non-redundant genes and had transcriptional support in the model root-knot nematode Meloidogyne incognita. Infestation assays with siRNA-treated M. incognita on tomato plants showed significant and reproducible reduction of the infestation for 12 of the 16 tested genes compared to control nematodes. These 12 novel genes, showing efficient reduction of parasitism when silenced, constitute promising targets for the development of more specific and safer control means. Plant-parasitic nematodes are annually responsible for more than $100 billion crop yield loss worldwide and those considered as causing most of the damages are root-knot nematodes. These nematodes used to be controlled by chemicals that are now banned from use because of their poor specificity and high toxicity for the environment and human health. In the absence of sustainable alternative solutions, new control means, more specifically targeted against these nematodes and safe for the environment are needed. We searched in root-knot nematode genomes, genes conserved in various plant-damaging species while otherwise absent from the genomes of non target species such as those of chordates, plants, annelids, insect pollinators and mollusks. These genes are probably important for plant parasitism and their absence from non-target species make them interesting candidates for the development of more specific and safer control means. Further bioinformatics pruning of this set of genes yielded 16 novel candidates that could be biologically tested. Using RNA interference, we knocked down each of these 16 genes in a root-knot nematode and tested the effect on plant parasitism efficiency. Out of the 16 tested genes, 12 showed a significant and reproducible diminution of infestation when silenced and are thus particularly promising.
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Zhang WP, Ruan WB, Deng YY, Gao YB. Potential antagonistic effects of nine natural fatty acids against Meloidogyne incognita. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2012; 60:11631-7. [PMID: 23121218 DOI: 10.1021/jf3036885] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
Fatty acids, the essential components of life, were widely present in various seed cakes, gutter oil, and other resources. The objective of this study was to evaluate the potential antagonistic effects of nine fatty acids (FAs) against Meloidogyne incognita (root-knot nematodes). The results showed that butyric, caprylic, capric, lauric, myristic, palmitic, and oleic acids significantly reduced M. incognita reproduction, whereas cucumber (Cucumus sativus) biomass was not adversely affected by the tested FAs and was even significantly increased in several fatty acids treatments. All nine tested fatty acids showed apparent inhibitory effects on egg hatching on day 21, especially capric acid with which the hatching rate was reduced to 15.8% as compared to that using sterile distilled water. Caproic, caprylic, capric, lauric, myristic, and palmitic acids caused significantly higher mortality of the second-stage juvenile of M. incognita than the other three FAs, and both caprylic and capric acids resulted in approximately 50% mortality (2000 μmol/L) after a 24 h exposure. In conclusion, fatty acids showed the nematicidal effect differently, among which capric acid showed a strong nematicidal effect and might be a powerful active substance for integrated M. incognita management. Given the general nematicidal properties of FAs, farmers might utilize waste resources, such as oil seed cake, gutter oil, etc., containing various FAs or use pure FAs for effective M. incognita management.
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Affiliation(s)
- Wei-pu Zhang
- College of Life Sciences, Nankai University, Tianjin 300071, PR China
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Parry M. Food and energy security: exploring the challenges of attaining secure and sustainable supplies of food and energy. Food Energy Secur 2012. [DOI: 10.1002/fes3.1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
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