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Marconi M, Wabnik K. Computer models of cell polarity establishment in plants. PLANT PHYSIOLOGY 2023; 193:42-53. [PMID: 37144853 PMCID: PMC10469401 DOI: 10.1093/plphys/kiad264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Revised: 03/30/2023] [Accepted: 04/14/2023] [Indexed: 05/06/2023]
Abstract
Plant development is a complex task, and many processes involve changes in the asymmetric subcellular distribution of cell components that strongly depend on cell polarity. Cell polarity regulates anisotropic growth and polar localization of membrane proteins and helps to identify the cell's position relative to its neighbors within an organ. Cell polarity is critical in a variety of plant developmental processes, including embryogenesis, cell division, and response to external stimuli. The most conspicuous downstream effect of cell polarity is the polar transport of the phytohormone auxin, which is the only known hormone transported in a polar fashion in and out of cells by specialized exporters and importers. The biological processes behind the establishment of cell polarity are still unknown, and researchers have proposed several models that have been tested using computer simulations. The evolution of computer models has progressed in tandem with scientific discoveries, which have highlighted the importance of genetic, chemical, and mechanical input in determining cell polarity and regulating polarity-dependent processes such as anisotropic growth, protein subcellular localization, and the development of organ shapes. The purpose of this review is to provide a comprehensive overview of the current understanding of computer models of cell polarity establishment in plants, focusing on the molecular and cellular mechanisms, the proteins involved, and the current state of the field.
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Affiliation(s)
- Marco Marconi
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación Agraria y Alimentaria (INIA/CSIC), Campus de Montegancedo, Pozuelo de Alarcón, Madrid, Spain
| | - Krzysztof Wabnik
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación Agraria y Alimentaria (INIA/CSIC), Campus de Montegancedo, Pozuelo de Alarcón, Madrid, Spain
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2
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Peng Z, Alique D, Xiong Y, Hu J, Cao X, Lü S, Long M, Wang Y, Wabnik K, Jiao Y. Differential growth dynamics control aerial organ geometry. Curr Biol 2022; 32:4854-4868.e5. [PMID: 36272403 DOI: 10.1016/j.cub.2022.09.055] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2021] [Revised: 07/05/2022] [Accepted: 09/27/2022] [Indexed: 11/22/2022]
Abstract
How gene activities and biomechanics together direct organ shapes is poorly understood. Plant leaf and floral organs develop from highly similar initial structures and share similar gene expression patterns, yet they gain drastically different shapes later-flat and bilateral leaf primordia and radially symmetric floral primordia, respectively. We analyzed cellular growth patterns and gene expression in young leaves and flowers of Arabidopsis thaliana and found significant differences in cell growth rates, which correlate with convergence sites of phytohormone auxin that require polar auxin transport. In leaf primordia, the PRESSED-FLOWER-expressing middle domain grows faster than adjacent adaxial domain and coincides with auxin convergence. In contrast, in floral primordia, the LEAFY-expressing domain shows accelerated growth rates and pronounced auxin convergence. This distinct cell growth dynamics between leaf and flower requires changes in levels of cell-wall pectin de-methyl-esterification and mechanical properties of the cell wall. Data-driven computer model simulations at organ and cellular levels demonstrate that growth differences are central to obtaining distinct organ shape, corroborating in planta observations. Together, our study provides a mechanistic basis for the establishment of early aerial organ symmetries through local modulation of differential growth patterns with auxin and biomechanics.
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Affiliation(s)
- Ziyuan Peng
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Daniel Alique
- Centro de Biotecnología y Genómica de Plantas (CBGP), Universidad Politécnica de Madrid (UPM), Centro Nacional Instituto de Investigación y Tecnología Agraria y Alimentaria (INIA, CSIC), Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain
| | - Yuanyuan Xiong
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing 100101, China
| | - Jinrong Hu
- Key Laboratory of Microgravity (National Microgravity Laboratory), Center of Biomechanics and Bioengineering, and Beijing Key Laboratory of Engineered Construction and Mechanobiology, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190, China; School of Engineering Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiuwei Cao
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing 100101, China
| | - Shouqin Lü
- Key Laboratory of Microgravity (National Microgravity Laboratory), Center of Biomechanics and Bioengineering, and Beijing Key Laboratory of Engineered Construction and Mechanobiology, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190, China; School of Engineering Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Mian Long
- Key Laboratory of Microgravity (National Microgravity Laboratory), Center of Biomechanics and Bioengineering, and Beijing Key Laboratory of Engineered Construction and Mechanobiology, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190, China; School of Engineering Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ying Wang
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Krzysztof Wabnik
- Centro de Biotecnología y Genómica de Plantas (CBGP), Universidad Politécnica de Madrid (UPM), Centro Nacional Instituto de Investigación y Tecnología Agraria y Alimentaria (INIA, CSIC), Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain.
| | - Yuling Jiao
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing 100101, China; State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, School of Life Sciences, Center for Quantitative Biology, Peking University, Beijing 100871, China; Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agricultural Sciences at Weifang, Weifang, Shandong 261000, China.
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3
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Mills AM, Rasmussen CG. Defects in division plane positioning in the root meristematic zone affect cell organization in the differentiation zone. J Cell Sci 2022; 135:276936. [PMID: 36074053 DOI: 10.1242/jcs.260127] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Accepted: 09/01/2022] [Indexed: 11/20/2022] Open
Abstract
Cell division plane orientation is critical for plant and animal development and growth. TANGLED1 (TAN1) and AUXIN-INDUCED-IN-ROOT-CULTURES9 (AIR9) are division-site localized microtubule-binding proteins required for division plane positioning. tan1 and air9 Arabidopsis thaliana single mutants have minor or no noticeable phenotypes but the tan1 air9 double mutant has synthetic phenotypes including stunted growth, misoriented divisions, and aberrant cell-file rotation in the root differentiation zone. These data suggest that TAN1 plays a role in nondividing cells. To determine whether TAN1 is required in elongating and differentiating cells in the tan1 air9 double mutant, we limited its expression to actively dividing cells using the G2/M-specific promoter of the syntaxin KNOLLE (pKN:TAN1-YFP). Unexpectedly, in addition to rescuing division plane defects, pKN:TAN1-YFP rescued root growth and the root differentiation zone cell file rotation defects in the tan1 air9 double mutant. This suggests that defects that occur in the meristematic zone later affect the organization of elongating and differentiating cells.
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Affiliation(s)
- Alison M Mills
- Graduate Group in Biochemistry and Molecular Biology, USA
| | - Carolyn G Rasmussen
- Graduate Group in Biochemistry and Molecular Biology, USA.,Department of Botany and Plant Sciences, Center for Plant Cell Biology, Institute of Integrative Genome Biology, University of California, Riverside, USA
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4
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Guo K, Huang C, Miao Y, Cosgrove DJ, Hsia KJ. Leaf morphogenesis: The multifaceted roles of mechanics. MOLECULAR PLANT 2022; 15:1098-1119. [PMID: 35662674 DOI: 10.1016/j.molp.2022.05.015] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Revised: 05/18/2022] [Accepted: 05/26/2022] [Indexed: 05/12/2023]
Abstract
Plants produce a rich diversity of biological forms, and the diversity of leaves is especially notable. Mechanisms of leaf morphogenesis have been studied in the past two decades, with a growing focus on the interactive roles of mechanics in recent years. Growth of plant organs involves feedback by mechanical stress: growth induces stress, and stress affects growth and morphogenesis. Although much attention has been given to potential stress-sensing mechanisms and cellular responses, the mechanical principles guiding morphogenesis have not been well understood. Here we synthesize the overarching roles of mechanics and mechanical stress in multilevel and multiple stages of leaf morphogenesis, encompassing leaf primordium initiation, phyllotaxis and venation patterning, and the establishment of complex mature leaf shapes. Moreover, the roles of mechanics at multiscale levels, from subcellular cytoskeletal molecules to single cells to tissues at the organ scale, are articulated. By highlighting the role of mechanical buckling in the formation of three-dimensional leaf shapes, this review integrates the perspectives of mechanics and biology to provide broader insights into the mechanobiology of leaf morphogenesis.
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Affiliation(s)
- Kexin Guo
- School of Mechanical and Aerospace Engineering, Nanyang Technological University, Singapore 639798, Singapore
| | - Changjin Huang
- School of Mechanical and Aerospace Engineering, Nanyang Technological University, Singapore 639798, Singapore
| | - Yansong Miao
- School of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore
| | - Daniel J Cosgrove
- Department of Biology, The Pennsylvania State University, University Park, PA 16802, USA.
| | - K Jimmy Hsia
- School of Mechanical and Aerospace Engineering, Nanyang Technological University, Singapore 639798, Singapore; School of Chemical and Biomedical Engineering, Nanyang Technological University, Singapore 637459, Singapore.
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5
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Vijayan A, Strauss S, Tofanelli R, Mody TA, Lee K, Tsiantis M, Smith RS, Schneitz K. The annotation and analysis of complex 3D plant organs using 3DCoordX. PLANT PHYSIOLOGY 2022; 189:1278-1295. [PMID: 35348744 PMCID: PMC9237718 DOI: 10.1093/plphys/kiac145] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2021] [Accepted: 03/05/2022] [Indexed: 06/14/2023]
Abstract
A fundamental question in biology concerns how molecular and cellular processes become integrated during morphogenesis. In plants, characterization of 3D digital representations of organs at single-cell resolution represents a promising approach to addressing this problem. A major challenge is to provide organ-centric spatial context to cells of an organ. We developed several general rules for the annotation of cell position and embodied them in 3DCoordX, a user-interactive computer toolbox implemented in the open-source software MorphoGraphX. 3DCoordX enables rapid spatial annotation of cells even in highly curved biological shapes. Using 3DCoordX, we analyzed cellular growth patterns in organs of several species. For example, the data indicated the presence of a basal cell proliferation zone in the ovule primordium of Arabidopsis (Arabidopsis thaliana). Proof-of-concept analyses suggested a preferential increase in cell length associated with neck elongation in the archegonium of Marchantia (Marchantia polymorpha) and variations in cell volume linked to central morphogenetic features of a trap of the carnivorous plant Utricularia (Utricularia gibba). Our work demonstrates the broad applicability of the developed strategies as they provide organ-centric spatial context to cellular features in plant organs of diverse shape complexity.
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Affiliation(s)
| | | | - Rachele Tofanelli
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Tejasvinee Atul Mody
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | | | - Miltos Tsiantis
- Department of Comparative Developmental and Genetics, Max Planck Institute for Plant Breeding Research, Cologne, Germany
| | - Richard S Smith
- Department of Comparative Developmental and Genetics, Max Planck Institute for Plant Breeding Research, Cologne, Germany
- The John Innes Centre, Norwich, UK
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6
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Burgess AJ, Majda M. A future in 3D: Analyzing morphology in all dimensions. PLANT PHYSIOLOGY 2022; 189:1175-1176. [PMID: 35478044 PMCID: PMC9237670 DOI: 10.1093/plphys/kiac190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Accepted: 04/11/2022] [Indexed: 06/14/2023]
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Agrawal A, Pareek A, Dkhar J. Genetic Basis of Carnivorous Leaf Development. FRONTIERS IN PLANT SCIENCE 2022; 12:825289. [PMID: 35095989 PMCID: PMC8792892 DOI: 10.3389/fpls.2021.825289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Accepted: 12/23/2021] [Indexed: 06/14/2023]
Abstract
Plant carnivory is often manifested as dramatic changes in the structure and morphology of the leaf. These changes appear to begin early in leaf development. For example, the development of the Sarracenia purpurea leaf primordium is associated with the formation of an adaxial ridge, whose growth along with that of the leaf margin resulted in a hollow structure that later developed into a pitcher. In Nepenthes khasiana, pitcher formation occurs during the initial stages of leaf development, although this has not been shown at the primordial stage. The formation of the Utricularia gibba trap resulted from the growth of the dome-shaped primordium in both the longitudinal and transverse directions. Recent research has begun to unfold the genetic basis of the development of the carnivorous leaf. We review these findings and discuss them in relation to the flat-shaped leaves of the model plant Arabidopsis.
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Affiliation(s)
- Arpita Agrawal
- Plant EvoDevo Laboratory, Agrotechnology Division, CSIR-Institute of Himalayan Bioresource Technology, Palampur, India
| | - Ashwani Pareek
- Stress Physiology and Molecular Biology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, India
- National Agri-Food Biotechnology Institute, Mohali, India
| | - Jeremy Dkhar
- Plant EvoDevo Laboratory, Agrotechnology Division, CSIR-Institute of Himalayan Bioresource Technology, Palampur, India
- Academy of Scientific and Innovative Research, Ghaziabad, India
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Miranda VFO, Silva SR, Reut MS, Dolsan H, Stolarczyk P, Rutishauser R, Płachno BJ. A Historical Perspective of Bladderworts ( Utricularia): Traps, Carnivory and Body Architecture. PLANTS (BASEL, SWITZERLAND) 2021; 10:plants10122656. [PMID: 34961127 PMCID: PMC8707321 DOI: 10.3390/plants10122656] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Revised: 11/28/2021] [Accepted: 11/29/2021] [Indexed: 05/14/2023]
Abstract
The genus Utricularia includes around 250 species of carnivorous plants, commonly known as bladderworts. The generic name Utricularia was coined by Carolus Linnaeus in reference to the carnivorous organs (Utriculus in Latin) present in all species of the genus. Since the formal proposition by Linnaeus, many species of Utricularia were described, but only scarce information about the biology for most species is known. All Utricularia species are herbs with vegetative organs that do not follow traditional models of morphological classification. Since the formal description of Utricularia in the 18th century, the trap function has intrigued naturalists. Historically, the traps were regarded as floating organs, a common hypothesis that was maintained by different botanists. However, Charles Darwin was most likely the first naturalist to refute this idea, since even with the removal of all traps, the plants continued to float. More recently, due mainly to methodological advances, detailed studies on the trap function and mechanisms could be investigated. This review shows a historical perspective on Utricularia studies which focuses on the traps and body organization.
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Affiliation(s)
- Vitor F. O. Miranda
- Laboratory of Plant Systematics, Department of Applied Biology, School of Agricultural and Veterinarian Sciences, Campus Jaboticabal, UNESP—São Paulo State University, Jaboticabal CEP 14884-900, Brazil; (S.R.S.); (H.D.)
- Correspondence:
| | - Saura R. Silva
- Laboratory of Plant Systematics, Department of Applied Biology, School of Agricultural and Veterinarian Sciences, Campus Jaboticabal, UNESP—São Paulo State University, Jaboticabal CEP 14884-900, Brazil; (S.R.S.); (H.D.)
| | - Markus S. Reut
- Department of Plant Cytology and Embryology, Institute of Botany, Faculty of Biology, Jagiellonian University in Kraków, Gronostajowa 9 St., 30-387 Kraków, Poland; (M.S.R.); (B.J.P.)
| | - Hugo Dolsan
- Laboratory of Plant Systematics, Department of Applied Biology, School of Agricultural and Veterinarian Sciences, Campus Jaboticabal, UNESP—São Paulo State University, Jaboticabal CEP 14884-900, Brazil; (S.R.S.); (H.D.)
| | - Piotr Stolarczyk
- Department of Botany, Physiology and Plant Protection, Faculty of Biotechnology and Horticulture, University of Agriculture in Kraków, al. 29 Listopada 54, 31-425 Kraków, Poland;
| | - Rolf Rutishauser
- Department of Systematic and Evolutionary Botany, University of Zurich, CH-8008 Zurich, Switzerland;
| | - Bartosz J. Płachno
- Department of Plant Cytology and Embryology, Institute of Botany, Faculty of Biology, Jagiellonian University in Kraków, Gronostajowa 9 St., 30-387 Kraków, Poland; (M.S.R.); (B.J.P.)
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Galipot P, Gerber S, Le Guilloux M, Jabbour F, Damerval C. Micro- and Macroscale Patterns of Petal Morphogenesis in Nigella damascena (Ranunculaceae) Revealed by Geometric Morphometrics and Cellular Analyses. FRONTIERS IN PLANT SCIENCE 2021; 12:769246. [PMID: 34868166 PMCID: PMC8640125 DOI: 10.3389/fpls.2021.769246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Accepted: 10/12/2021] [Indexed: 06/13/2023]
Abstract
Petals, the inner organs in a differentiated perianth, generally play an important role in pollinator attraction. As such they exhibit an extraordinary diversity of shapes, sizes, and colors. Being involved in pollinator attraction and reward, they are privileged targets of evolution. The corolla of the Ranunculaceae species Nigella damascena consists of elaborate nectariferous petals, made of a stalk, upper, and lower lips forming a nectar pouch, shiny pseudonectaries, and pilose ears. While the main events of petal development are properly described, a few is known about the pattern of organ size and shape covariation and the cellular dynamics during development. In this study, we investigated the relationships between morphogenesis and growth of N. damascena petals using geometric morphometrics coupled with the study of cell characteristics. First, we found that petal shape and size dynamics are allometric during development and that their covariation suggests that petal shape change dynamics are exponentially slower than growth. We then found that cell proliferation is the major driver of shape patterning during development, while petal size dynamics are mostly driven by cell expansion. Our analyses provide a quantitative basis to characterize the relationships between shape, size, and cell characteristics during the development of an elaborate floral structure. Such studies lay the ground for future evo-devo investigations of the large morphological diversity observed in nectariferous structures, in Ranunculaceae and beyond.
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Affiliation(s)
- Pierre Galipot
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum National d’Histoire Naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France
- Génétique Quantitative et Evolution-Le Moulon, Université Paris-Saclay, INRAE, CNRS, AgroParisTech, Gif-sur-Yvette, France
| | - Sylvain Gerber
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum National d’Histoire Naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France
| | - Martine Le Guilloux
- Génétique Quantitative et Evolution-Le Moulon, Université Paris-Saclay, INRAE, CNRS, AgroParisTech, Gif-sur-Yvette, France
| | - Florian Jabbour
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum National d’Histoire Naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France
| | - Catherine Damerval
- Génétique Quantitative et Evolution-Le Moulon, Université Paris-Saclay, INRAE, CNRS, AgroParisTech, Gif-sur-Yvette, France
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Conway SJ, Walcher-Chevillet CL, Salome Barbour K, Kramer EM. Brassinosteroids regulate petal spur length in Aquilegia by controlling cell elongation. ANNALS OF BOTANY 2021; 128:931-942. [PMID: 34508638 PMCID: PMC8577200 DOI: 10.1093/aob/mcab116] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Accepted: 09/10/2021] [Indexed: 05/26/2023]
Abstract
BACKGROUND AND AIMS Aquilegia produce elongated, three-dimensional petal spurs that fill with nectar to attract pollinators. Previous studies have shown that the diversity of spur length across the Aquilegia genus is a key innovation that is tightly linked with its recent and rapid diversification into new ranges, and that evolution of increased spur lengths is achieved via anisotropic cell elongation. Previous work identified a brassinosteroid response transcription factor as being enriched in the early developing spur cup. Brassinosteroids are known to be important for cell elongation, suggesting that brassinosteroid-mediated response may be an important regulator of spur elongation and potentially a driver of spur length diversity in Aquilegia. In this study, we investigated the role of brassinosteroids in the development of the Aquilegia coerulea petal spur. METHODS We exogenously applied the biologically active brassinosteroid brassinolide to developing petal spurs to investigate spur growth under high hormone conditions. We used virus-induced gene silencing and gene expression experiments to understand the function of brassinosteroid-related transcription factors in A. coerulea petal spurs. KEY RESULTS We identified a total of three Aquilegia homologues of the BES1/BZR1 protein family and found that these genes are ubiquitously expressed in all floral tissues during development, yet, consistent with the previous RNAseq study, we found that two of these paralogues are enriched in early developing petals. Exogenously applied brassinosteroid increased petal spur length due to increased anisotropic cell elongation as well as cell division. We found that targeting of the AqBEH genes with virus-induced gene silencing resulted in shortened petals, a phenotype caused in part by a loss of cell anisotropy. CONCLUSIONS Collectively, our results support a role for brassinosteroids in anisotropic cell expansion in Aquilegia petal spurs and highlight the brassinosteroid pathway as a potential player in the diversification of petal spur length in Aquilegia.
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Affiliation(s)
- Stephanie J Conway
- Department of Organismic and Evolutionary Biology, Harvard University, 16 Divinity Ave., Cambridge, MA 02138, USA
| | - Cristina L Walcher-Chevillet
- Department of Organismic and Evolutionary Biology, Harvard University, 16 Divinity Ave., Cambridge, MA 02138, USA
- 10x Genomics Inc., 6230 Stoneridge Mall Road, Pleasanton, CA 94588, USA
| | - Kate Salome Barbour
- Department of Organismic and Evolutionary Biology, Harvard University, 16 Divinity Ave., Cambridge, MA 02138, USA
- Abramson Cancer Center, University of Pennsylvania, 3400 Civic Center Blvd., Philadelphia, PA 19104, USA
| | - Elena M Kramer
- Department of Organismic and Evolutionary Biology, Harvard University, 16 Divinity Ave., Cambridge, MA 02138, USA
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11
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Phan PT, Hoang TT, Thai MT, Low H, Lovell NH, Do TN. Twisting and Braiding Fluid-Driven Soft Artificial Muscle Fibers for Robotic Applications. Soft Robot 2021; 9:820-836. [PMID: 34613831 DOI: 10.1089/soro.2021.0040] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
Research on soft artificial muscles (SAMs) is rapidly growing, both in developing new actuation ideas and improving existing structures with multifunctionality. The human body has more than 600 muscles that drive organs and joints to achieve desired functions. Inspired by the human muscles, this article presents a new type of SAM fiber formed from twisting and braiding soft hydraulic filament artificial muscles with high aspect ratio, high strain, and high energy efficiency. We systematically investigated the relationship between input pressure and output elongation as well as contraction force of the new muscles using different configurations in terms of an array of single and multiple muscles arranged in nontwisting (or straight), twisting, and braiding variants. Experimental results revealed that the twisting and braiding configurations greatly enhanced the muscle elongation and generated force compared with their nontwisting/braiding counterparts. To demonstrate the new muscles' usability, we implemented several muscle variants to bidirectionally manipulate 3D-printed human fingers and elbow, mimicking the human upper limb with a full range of motion. We also created a bioinspired growing soft tubular muscle that could simultaneously exert longitudinal and radial expansion upon pressurization, similar to that of auxetic metamaterial structures. The new growing soft tubular muscles were experimentally validated and the results showed that they could be potentially implemented in several emerging applications, including smart compression garments, stent-like supporting devices, and tubular grippers for medical use.
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Affiliation(s)
- Phuoc Thien Phan
- Graduate School of Biomedical Engineering, Faculty of Engineering, University of New South Wales (UNSW), Sydney, New South Wales, Australia
| | - Trung Thien Hoang
- Graduate School of Biomedical Engineering, Faculty of Engineering, University of New South Wales (UNSW), Sydney, New South Wales, Australia
| | - Mai Thanh Thai
- Graduate School of Biomedical Engineering, Faculty of Engineering, University of New South Wales (UNSW), Sydney, New South Wales, Australia
| | - Harrison Low
- Graduate School of Biomedical Engineering, Faculty of Engineering, University of New South Wales (UNSW), Sydney, New South Wales, Australia
| | - Nigel Hamilton Lovell
- Graduate School of Biomedical Engineering, Faculty of Engineering, University of New South Wales (UNSW), Sydney, New South Wales, Australia
| | - Thanh Nho Do
- Graduate School of Biomedical Engineering, Faculty of Engineering, University of New South Wales (UNSW), Sydney, New South Wales, Australia
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12
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Refahi Y, Zardilis A, Michelin G, Wightman R, Leggio B, Legrand J, Faure E, Vachez L, Armezzani A, Risson AE, Zhao F, Das P, Prunet N, Meyerowitz EM, Godin C, Malandain G, Jönsson H, Traas J. A multiscale analysis of early flower development in Arabidopsis provides an integrated view of molecular regulation and growth control. Dev Cell 2021; 56:540-556.e8. [PMID: 33621494 PMCID: PMC8519405 DOI: 10.1016/j.devcel.2021.01.019] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 12/17/2020] [Accepted: 01/25/2021] [Indexed: 12/31/2022]
Abstract
We have analyzed the link between the gene regulation and growth during the early stages of flower development in Arabidopsis. Starting from time-lapse images, we generated a 4D atlas of early flower development, including cell lineage, cellular growth rates, and the expression patterns of regulatory genes. This information was introduced in MorphoNet, a web-based platform. Using computational models, we found that the literature-based molecular network only explained a minority of the gene expression patterns. This was substantially improved by adding regulatory hypotheses for individual genes. Correlating growth with the combinatorial expression of multiple regulators led to a set of hypotheses for the action of individual genes in morphogenesis. This identified the central factor LEAFY as a potential regulator of heterogeneous growth, which was supported by quantifying growth patterns in a leafy mutant. By providing an integrated view, this atlas should represent a fundamental step toward mechanistic models of flower development.
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Affiliation(s)
- Yassin Refahi
- The Sainsbury Laboratory, University of Cambridge, Bateman Street, Cambridge CB2 1LR, UK; Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France; Université de Reims Champagne Ardenne, INRAE, FARE, UMR A 614, 51097 Reims, France.
| | - Argyris Zardilis
- The Sainsbury Laboratory, University of Cambridge, Bateman Street, Cambridge CB2 1LR, UK
| | - Gaël Michelin
- Université Côte d'Azur, Inria, Sophia Antipolis, CNRS, I3S, France
| | - Raymond Wightman
- The Sainsbury Laboratory, University of Cambridge, Bateman Street, Cambridge CB2 1LR, UK
| | - Bruno Leggio
- Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France
| | - Jonathan Legrand
- Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France
| | | | - Laetitia Vachez
- Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France
| | - Alessia Armezzani
- Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France
| | - Anne-Evodie Risson
- Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France
| | - Feng Zhao
- Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France
| | - Pradeep Das
- Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France
| | - Nathanaël Prunet
- Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA
| | - Elliot M Meyerowitz
- The Sainsbury Laboratory, University of Cambridge, Bateman Street, Cambridge CB2 1LR, UK; Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA; Howard Hughes Medical Institute and Division of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA 91125, USA
| | - Christophe Godin
- Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France
| | | | - Henrik Jönsson
- The Sainsbury Laboratory, University of Cambridge, Bateman Street, Cambridge CB2 1LR, UK; Computational Biology and Biological Physics, Lund University, Sölvegatan 14A, 223 62 Lund, Sweden; Department of Applied Mathematics and Theoretical Physics (DAMTP), University of Cambridge, Cambridge, UK.
| | - Jan Traas
- Laboratoire RDP, Université de Lyon 1, ENS-Lyon, INRAE, CNRS, UCBL, 69364 Lyon, France.
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13
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Chaudhary A, Chen X, Leśniewska B, Boikine R, Gao J, Wolf S, Schneitz K. Cell wall damage attenuates root hair patterning and tissue morphogenesis mediated by the receptor kinase STRUBBELIG. Development 2021; 148:270854. [PMID: 34251020 DOI: 10.1242/dev.199425] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2021] [Accepted: 06/14/2021] [Indexed: 01/15/2023]
Abstract
Cell wall remodeling is essential for the control of growth and development as well as the regulation of stress responses. However, the underlying cell wall monitoring mechanisms remain poorly understood. Regulation of root hair fate and flower development in Arabidopsis thaliana requires signaling mediated by the atypical receptor kinase STRUBBELIG (SUB). Furthermore, SUB is involved in cell wall integrity signaling and regulates the cellular response to reduced levels of cellulose, a central component of the cell wall. Here, we show that continuous exposure to sub-lethal doses of the cellulose biosynthesis inhibitor isoxaben results in altered root hair patterning and floral morphogenesis. Genetically impairing cellulose biosynthesis also results in root hair patterning defects. We further show that isoxaben exerts its developmental effects through the attenuation of SUB signaling. Our evidence indicates that downregulation of SUB is a multi-step process and involves changes in SUB complex architecture at the plasma membrane, enhanced removal of SUB from the cell surface, and downregulation of SUB transcript levels. The results provide molecular insight into how the cell wall regulates cell fate and tissue morphogenesis.
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Affiliation(s)
- Ajeet Chaudhary
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, 85354 Freising, Germany
| | - Xia Chen
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, 85354 Freising, Germany
| | - Barbara Leśniewska
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, 85354 Freising, Germany
| | - Rodion Boikine
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, 85354 Freising, Germany
| | - Jin Gao
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, 85354 Freising, Germany
| | - Sebastian Wolf
- Cell wall signaling group, Centre for Organismal Studies, University of Heidelberg, 69120 Heidelberg, Germany
| | - Kay Schneitz
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, 85354 Freising, Germany
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14
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Bhatia N, Runions A, Tsiantis M. Leaf Shape Diversity: From Genetic Modules to Computational Models. ANNUAL REVIEW OF PLANT BIOLOGY 2021; 72:325-356. [PMID: 34143649 DOI: 10.1146/annurev-arplant-080720-101613] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Plant leaves display considerable variation in shape. Here, we introduce key aspects of leaf development, focusing on the morphogenetic basis of leaf shape diversity. We discuss the importance of the genetic control of the amount, duration, and direction of cellular growth for the emergence of leaf form. We highlight how the combined use of live imaging and computational frameworks can help conceptualize how regulated cellular growth is translated into different leaf shapes. In particular, we focus on the morphogenetic differences between simple and complex leaves and how carnivorous plants form three-dimensional insect traps. We discuss how evolution has shaped leaf diversity in the case of complex leaves, by tinkering with organ-wide growth and local growth repression, and in carnivorous plants, by modifying the relative growth of the lower and upper sides of the leaf primordium to create insect-digesting traps.
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Affiliation(s)
- Neha Bhatia
- Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany;
| | - Adam Runions
- Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany;
- Current affiliation: Department of Computer Science, University of Calgary, Calgary, Alberta T2N 1N4, Canada
| | - Miltos Tsiantis
- Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany;
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15
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Xiong Y, Wu B, Du F, Guo X, Tian C, Hu J, Lü S, Long M, Zhang L, Wang Y, Jiao Y. A crosstalk between auxin and brassinosteroid regulates leaf shape by modulating growth anisotropy. MOLECULAR PLANT 2021; 14:949-962. [PMID: 33722761 DOI: 10.1016/j.molp.2021.03.011] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Revised: 01/13/2021] [Accepted: 03/10/2021] [Indexed: 06/12/2023]
Abstract
Leaf shape is highly variable within and among plant species, ranging from slender to oval shaped. This is largely determined by the proximodistal axis of growth. However, little is known about how proximal-distal growth is controlled to determine leaf shape. Here, we show that Arabidopsis leaf and sepal proximodistal growth is tuned by two phytohormones. Two class A AUXIN RESPONSE FACTORs (ARFs), ARF6 and ARF8, activate the transcription of DWARF4, which encodes a key brassinosteroid (BR) biosynthetic enzyme. At the cellular level, the phytohormones promote more directional cell expansion along the proximodistal axis, as well as final cell sizes. BRs promote the demethyl-esterification of cell wall pectins, leading to isotropic in-plane cell wall loosening. Notably, numerical simulation showed that isotropic cell wall loosening could lead to directional cell and organ growth along the proximodistal axis. Taken together, we show that auxin acts through biosynthesis of BRs to determine cell wall mechanics and directional cell growth to generate leaves of variable roundness.
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Affiliation(s)
- Yuanyuan Xiong
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, the Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing 100101, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Binbin Wu
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, the Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing 100101, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Fei Du
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, the Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing 100101, China
| | - Xiaolu Guo
- Beijing International Center for Mathematical Research, Peking University, Beijing 100871, China
| | - Caihuan Tian
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, the Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing 100101, China
| | - Jinrong Hu
- Key Laboratory of Microgravity (National Microgravity Laboratory), Center of Biomechanics and Bioengineering, and Beijing Key Laboratory of Engineered Construction and Mechanobiology, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190, China; School of Engineering Science, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Shouqin Lü
- Key Laboratory of Microgravity (National Microgravity Laboratory), Center of Biomechanics and Bioengineering, and Beijing Key Laboratory of Engineered Construction and Mechanobiology, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190, China; School of Engineering Science, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Mian Long
- Key Laboratory of Microgravity (National Microgravity Laboratory), Center of Biomechanics and Bioengineering, and Beijing Key Laboratory of Engineered Construction and Mechanobiology, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190, China; School of Engineering Science, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Lei Zhang
- Beijing International Center for Mathematical Research, Peking University, Beijing 100871, China.
| | - Ying Wang
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Yuling Jiao
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, the Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing 100101, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China.
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16
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Płachno BJ, Kapusta M, Świątek P, Banaś K, Miranda VFO, Bogucka-Kocka A. Spatio-Temporal Distribution of Cell Wall Components in the Placentas, Ovules and Female Gametophytes of Utricularia during Pollination. Int J Mol Sci 2021; 22:ijms22115622. [PMID: 34070693 PMCID: PMC8199428 DOI: 10.3390/ijms22115622] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2021] [Revised: 05/22/2021] [Accepted: 05/23/2021] [Indexed: 01/04/2023] Open
Abstract
In most angiosperms, the female gametophyte is hidden in the mother tissues and the pollen tube enters the ovule via a micropylar canal. The mother tissues play an essential role in the pollen tube guidance. However, in Utricularia, the female gametophyte surpasses the entire micropylar canal and extends beyond the limit of the integument. The female gametophyte then invades the placenta and a part of the central cell has direct contact with the ovary chamber. To date, information about the role of the placenta and integument in pollen tube guidance in Utricularia, which have extra-ovular female gametophytes, has been lacking. The aim of this study was to evaluate the role of the placenta, central cell and integument in pollen tube pollen tube guidance in Utricularia nelumbifolia Gardner and Utricularia humboldtii R.H. Schomb. by studying the production of arabinogalactan proteins. It was also determined whether the production of the arabinogalactan proteins is dependent on pollination in Utricularia. In both of the examined species, arabinogalactan proteins (AGPs) were observed in the placenta (epidermis and nutritive tissue), ovule (integument, chalaza), and female gametophyte of both pollinated and unpollinated flowers, which means that the production of AGPs is independent of pollination; however, the production of some AGPs was lower after fertilization. There were some differences in the production of AGPs between the examined species. The occurrence of AGPs in the placental epidermis and nutritive tissue suggests that they function as an obturator. The production of some AGPs in the ovular tissues (nucellus, integument) was independent of the presence of a mature embryo sac.
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Affiliation(s)
- Bartosz Jan Płachno
- Department of Plant Cytology and Embryology, Faculty of Biology, Institute of Botany, Jagiellonian University in Kraków, 9 Gronostajowa St., 30-387 Kraków, Poland
- Correspondence:
| | - Małgorzata Kapusta
- Department of Plant Cytology and Embryology, Faculty of Biology, University of Gdańsk, 59 Wita Stwosza St., 80-308 Gdańsk, Poland;
| | - Piotr Świątek
- Faculty of Natural Sciences, Biotechnology and Environmental Protection, Institute of Biology, University of Silesia in Katowice, 9 Bankowa St., 40-007 Katowice, Poland;
| | - Krzysztof Banaś
- Department of Plant Ecology, Faculty of Biology, University of Gdańsk, 59 Wita Stwosza St., 80-308 Gdańsk, Poland;
| | - Vitor F. O. Miranda
- Laboratory of Plant Systematics, School of Agricultural and Veterinarian Sciences, São Paulo State University (Unesp), Jaboticabal CEP 14884-900, SP, Brazil;
| | - Anna Bogucka-Kocka
- Chair and Department of Biology and Genetics, Medical University of Lublin, 20-093 Lublin, Poland;
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17
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Hernandez-Lagana E, Mosca G, Mendocilla-Sato E, Pires N, Frey A, Giraldo-Fonseca A, Michaud C, Grossniklaus U, Hamant O, Godin C, Boudaoud A, Grimanelli D, Autran D, Baroux C. Organ geometry channels reproductive cell fate in the Arabidopsis ovule primordium. eLife 2021; 10:e66031. [PMID: 33960300 PMCID: PMC8219382 DOI: 10.7554/elife.66031] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 05/03/2021] [Indexed: 12/13/2022] Open
Abstract
In multicellular organisms, sexual reproduction requires the separation of the germline from the soma. In flowering plants, the female germline precursor differentiates as a single spore mother cell (SMC) as the ovule primordium forms. Here, we explored how organ growth contributes to SMC differentiation. We generated 92 annotated 3D images at cellular resolution in Arabidopsis. We identified the spatio-temporal pattern of cell division that acts in a domain-specific manner as the primordium forms. Tissue growth models uncovered plausible morphogenetic principles involving a spatially confined growth signal, differential mechanical properties, and cell growth anisotropy. Our analysis revealed that SMC characteristics first arise in more than one cell but SMC fate becomes progressively restricted to a single cell during organ growth. Altered primordium geometry coincided with a delay in the fate restriction process in katanin mutants. Altogether, our study suggests that tissue geometry channels reproductive cell fate in the Arabidopsis ovule primordium.
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Affiliation(s)
| | - Gabriella Mosca
- Department of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of ZürichZürichSwitzerland
| | - Ethel Mendocilla-Sato
- Department of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of ZürichZürichSwitzerland
| | - Nuno Pires
- Department of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of ZürichZürichSwitzerland
| | - Anja Frey
- Department of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of ZürichZürichSwitzerland
| | - Alejandro Giraldo-Fonseca
- Department of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of ZürichZürichSwitzerland
| | | | - Ueli Grossniklaus
- Department of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of ZürichZürichSwitzerland
| | - Olivier Hamant
- Laboratoire Reproduction et Développement des Plantes, University of Lyon, ENS Lyon, UCB Lyon 1, CNRS, INRAE, INRIALyonFrance
| | - Christophe Godin
- Laboratoire Reproduction et Développement des Plantes, University of Lyon, ENS Lyon, UCB Lyon 1, CNRS, INRAE, INRIALyonFrance
| | - Arezki Boudaoud
- Laboratoire Reproduction et Développement des Plantes, University of Lyon, ENS Lyon, UCB Lyon 1, CNRS, INRAE, INRIALyonFrance
| | | | - Daphné Autran
- DIADE, University of Montpellier, CIRAD, IRDMontpellierFrance
- Laboratoire Reproduction et Développement des Plantes, University of Lyon, ENS Lyon, UCB Lyon 1, CNRS, INRAE, INRIALyonFrance
| | - Célia Baroux
- Department of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of ZürichZürichSwitzerland
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18
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Moulia B, Douady S, Hamant O. Fluctuations shape plants through proprioception. Science 2021; 372:372/6540/eabc6868. [PMID: 33888615 DOI: 10.1126/science.abc6868] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Plants constantly experience fluctuating internal and external mechanical cues, ranging from nanoscale deformation of wall components, cell growth variability, nutating stems, and fluttering leaves to stem flexion under tree weight and wind drag. Developing plants use such fluctuations to monitor and channel their own shape and growth through a form of proprioception. Fluctuations in mechanical cues may also be actively enhanced, producing oscillating behaviors in tissues. For example, proprioception through leaf nastic movements may promote organ flattening. We propose that fluctuation-enhanced proprioception allows plant organs to sense their own shapes and behave like active materials with adaptable outputs to face variable environments, whether internal or external. Because certain shapes are more amenable to fluctuations, proprioception may also help plant shapes to reach self-organized criticality to support such adaptability.
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Affiliation(s)
- Bruno Moulia
- Université Clermont Auvergne, INRAE, PIAF, 63000 Clermont-Ferrand, France.
| | - Stéphane Douady
- Laboratoire Matières et Systèmes Complexes (MSC), Université de Paris, CNRS, 75205 Paris Cedex 13, France.
| | - Olivier Hamant
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCB Lyon 1, CNRS, INRAE, 69007 Lyon, France.
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19
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Abstract
The plant cell wall is an extracellular matrix that envelopes cells, gives them structure and shape, constitutes the interface with symbionts, and defends plants against external biotic and abiotic stress factors. The assembly of this matrix is regulated and mediated by the cytoskeleton. Cytoskeletal elements define where new cell wall material is added and how fibrillar macromolecules are oriented in the wall. Inversely, the cytoskeleton is also key in the perception of mechanical cues generated by structural changes in the cell wall as well as the mediation of intracellular responses. We review the delivery processes of the cell wall precursors that are required for the cell wall assembly process and the structural continuity between the inside and the outside of the cell. We provide an overview of the different morphogenetic processes for which cell wall assembly is a crucial element and elaborate on relevant feedback mechanisms.
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20
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Martinez CC, Li S, Woodhouse MR, Sugimoto K, Sinha NR. Spatial transcriptional signatures define margin morphogenesis along the proximal-distal and medio-lateral axes in tomato (Solanum lycopersicum) leaves. THE PLANT CELL 2021; 33:44-65. [PMID: 33710280 PMCID: PMC8136875 DOI: 10.1093/plcell/koaa012] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2020] [Accepted: 10/23/2020] [Indexed: 05/26/2023]
Abstract
Leaf morphogenesis involves cell division, expansion, and differentiation in the developing leaf, which take place at different rates and at different positions along the medio-lateral and proximal-distal leaf axes. The gene expression changes that control cell fate along these axes remain elusive due to difficulties in precisely isolating tissues. Here, we combined rigorous early leaf characterization, laser capture microdissection, and transcriptomic sequencing to ask how gene expression patterns regulate early leaf morphogenesis in wild-type tomato (Solanum lycopersicum) and the leaf morphogenesis mutant trifoliate. We observed transcriptional regulation of cell differentiation along the proximal-distal axis and identified molecular signatures delineating the classically defined marginal meristem/blastozone region during early leaf development. We describe the role of endoreduplication during leaf development, when and where leaf cells first achieve photosynthetic competency, and the regulation of auxin transport and signaling along the leaf axes. Knockout mutants of BLADE-ON-PETIOLE2 exhibited ectopic shoot apical meristem formation on leaves, highlighting the role of this gene in regulating margin tissue identity. We mapped gene expression signatures in specific leaf domains and evaluated the role of each domain in conferring indeterminacy and permitting blade outgrowth. Finally, we generated a global gene expression atlas of the early developing compound leaf.
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Affiliation(s)
- Ciera C Martinez
- Department of Molecular and Cellular Biology, University of California at Berkeley, Berkeley, CA 94709
- Berkeley Institute for Data Science, University of California at Berkeley, Berkeley, CA 94709
- Department of Plant Biology, University of California at Davis, Davis, CA 95616
| | - Siyu Li
- Department of Plant Biology, University of California at Davis, Davis, CA 95616
| | | | - Keiko Sugimoto
- RIKEN Center for Sustainable Resource Science, Tsurumi, Yokohama, 15 230-0045 Japan
| | - Neelima R Sinha
- Department of Plant Biology, University of California at Davis, Davis, CA 95616
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21
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Xu S, Hong L. Navigating flower development with a new atlas. Dev Cell 2021; 56:399-400. [PMID: 33621487 DOI: 10.1016/j.devcel.2021.02.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
In this issue of Developmental Cell, a study presents a 4D atlas integrating live imaging data and expression patterns of 28 regulatory genes in early flower development, which can be used to test gene regulation networks, leading to new hypotheses about the interactions and growth control activities of regulatory genes.
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Affiliation(s)
- Shouling Xu
- Institute of Nuclear Agricultural Sciences, Key Laboratory of Nuclear Agricultural Sciences of Ministry of Agriculture and Zhejiang Province, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
| | - Lilan Hong
- Institute of Nuclear Agricultural Sciences, Key Laboratory of Nuclear Agricultural Sciences of Ministry of Agriculture and Zhejiang Province, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
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22
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Trinh DC, Alonso-Serra J, Asaoka M, Colin L, Cortes M, Malivert A, Takatani S, Zhao F, Traas J, Trehin C, Hamant O. How Mechanical Forces Shape Plant Organs. Curr Biol 2021; 31:R143-R159. [PMID: 33561417 DOI: 10.1016/j.cub.2020.12.001] [Citation(s) in RCA: 50] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Plants produce organs of various shapes and sizes. While much has been learned about genetic regulation of organogenesis, the integration of mechanics in the process is also gaining attention. Here, we consider the role of forces as instructive signals in organ morphogenesis. Turgor pressure is the primary cause of mechanical signals in developing organs. Because plant cells are glued to each other, mechanical signals act, in essence, at multiple scales, through cell wall contiguity and water flux. In turn, cells use such signals to resist mechanical stress, for instance, by reinforcing their cell walls. We show that the three elemental shapes behind plant organs - spheres, cylinders and lamina - can be actively maintained by such a mechanical feedback. Combinations of this 3-letter alphabet can generate more complex shapes. Furthermore, mechanical conflicts emerge at the boundary between domains exhibiting different growth rates or directions. These secondary mechanical signals contribute to three other organ shape features - folds, shape reproducibility and growth arrest. The further integration of mechanical signals with the molecular network offers many fruitful prospects for the scientific community, including the role of proprioception in organ shape robustness or the definition of cell and organ identities as a result of an interplay between biochemical and mechanical signals.
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Affiliation(s)
- Duy-Chi Trinh
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France; Department of Pharmacological, Medical and Agronomical Biotechnology, University of Science and Technology of Hanoi, Cau Giay District, Hanoi, Vietnam
| | - Juan Alonso-Serra
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Mariko Asaoka
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Leia Colin
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Matthieu Cortes
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Alice Malivert
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Shogo Takatani
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Feng Zhao
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Jan Traas
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Christophe Trehin
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Olivier Hamant
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France.
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23
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Abstract
Abstract
Background
Organisms show an incredibly diverse array of body and organ shapes that are both unique to their taxon and important for adapting to their environment. Achieving these specific shapes involves coordinating the many processes that transform single cells into complex organs, and regulating their growth so that they can function within a fully-formed body.
Main text
Conceptually, body and organ shape can be separated in two categories, although in practice these categories need not be mutually exclusive. Body shape results from the extent to which organs, or parts of organs, grow relative to each other. The patterns of relative organ size are characterized using allometry. Organ shape, on the other hand, is defined as the geometric features of an organ’s component parts excluding its size. Characterization of organ shape is frequently described by the relative position of homologous features, known as landmarks, distributed throughout the organ. These descriptions fall into the domain of geometric morphometrics.
Conclusion
In this review, we discuss the methods of characterizing body and organ shape, the developmental programs thought to underlie each, highlight when and how the mechanisms regulating body and organ shape might overlap, and provide our perspective on future avenues of research.
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Abstract
Development encapsulates the morphogenesis of an organism from a single fertilized cell to a functional adult. A critical part of development is the specification of organ forms. Beyond the molecular control of morphogenesis, shape in essence entails structural constraints and thus mechanics. Revisiting recent results in biophysics and development, and comparing animal and plant model systems, we derive key overarching principles behind the formation of organs across kingdoms. In particular, we highlight how growing organs are active rather than passive systems and how such behavior plays a role in shaping the organ. We discuss the importance of considering different scales in understanding how organs form. Such an integrative view of organ development generates new questions while calling for more cross-fertilization between scientific fields and model system communities.
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Affiliation(s)
- O Hamant
- Laboratoire de Reproduction et Développement des Plantes, École normale supérieure (ENS) de Lyon, Université Claude Bernard Lyon (UCBL), Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), CNRS, Université de Lyon, 69364 Lyon, France;
| | - T E Saunders
- Mechanobiology Institute and Department of Biological Sciences, National University of Singapore, Singapore 117411; .,Institute of Molecular and Cell Biology, A*Star, Proteos, Singapore 138673
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25
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Fouracre JP, Kohler A, Amador G, Fung HF. FASEB: The mechanisms in plant development. THE NEW PHYTOLOGIST 2020; 225:2243-2245. [PMID: 32064629 DOI: 10.1111/nph.16426] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Affiliation(s)
- Jim P Fouracre
- Biology Department, University of Pennsylvania, Philadelphia, PA, 19104, USA
| | - Andrea Kohler
- Department of Horticulture, Michigan State University, East Lansing, MI, 48824, USA
| | - Gabriel Amador
- Department of Biology, Stanford University, Stanford, CA, 94305, USA
| | - Hannah F Fung
- Department of Biology, Stanford University, Stanford, CA, 94305, USA
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26
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Bauerle WL, McCullough C, Iversen M, Hazlett M. Leaf Age and Position Effects on Quantum Yield and Photosynthetic Capacity in Hemp Crowns. PLANTS (BASEL, SWITZERLAND) 2020; 9:E271. [PMID: 32092905 PMCID: PMC7076434 DOI: 10.3390/plants9020271] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2019] [Revised: 02/12/2020] [Accepted: 02/17/2020] [Indexed: 05/15/2023]
Abstract
We examined the aging of leaves prior to abscission and the consequences for estimating whole-crown primary production in Cannabis sativa L. (hemp). Leaves at three vertical positions in hemp crowns were examined from initial full leaf expansion until 42 days later. Photosynthetic capacity decreased as leaves aged regardless of crown position, light intensity, or photoperiod. Although leaves remained green, the photosynthetic capacity declined logarithmically to values of 50% and 25% of the maximum 9 and 25 days later, respectively. Plants grown under +450 μmol m-2 s-1 supplemental photosynthetically active radiation or enriched diffuse light responded similarly; there was no evidence that photoperiod or enriched diffuse light modified the gas exchange pattern. At approximately 14 days after full leaf expansion, leaf light levels >500 μmol m-2 s-1 decreased photosynthesis, which resulted in ≥10% lower maximum electron transport rate at ≥ 20 days of growth period. Furthermore, leaves were saturated at lower light levels as leaf age progressed (≤500 μmol m-2 s-1). Incorporating leaf age corrections of photosynthetic physiology is needed when estimating hemp primary production.
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Affiliation(s)
- William L. Bauerle
- Department of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, CO 80523, USA; (C.M.); (M.I.); (M.H.)
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27
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Whitewoods CD, Gonçalves B, Cheng J, Cui M, Kennaway R, Lee K, Bushell C, Yu M, Piao C, Coen E. Evolution of carnivorous traps from planar leaves through simple shifts in gene expression. Science 2019; 367:91-96. [DOI: 10.1126/science.aay5433] [Citation(s) in RCA: 60] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Accepted: 11/12/2019] [Indexed: 12/17/2022]
Abstract
Leaves vary from planar sheets and needle-like structures to elaborate cup-shaped traps. Here, we show that in the carnivorous plant Utricularia gibba, the upper leaf (adaxial) domain is restricted to a small region of the primordium that gives rise to the trap’s inner layer. This restriction is necessary for trap formation, because ectopic adaxial activity at early stages gives radialized leaves and no traps. We present a model that accounts for the formation of both planar and nonplanar leaves through adaxial-abaxial domains of gene activity establishing a polarity field that orients growth. In combination with an orthogonal proximodistal polarity field, this system can generate diverse leaf forms and account for the multiple evolutionary origins of cup-shaped leaves through simple shifts in gene expression.
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28
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Lee KJI, Bushell C, Koide Y, Fozard JA, Piao C, Yu M, Newman J, Whitewoods C, Avondo J, Kennaway R, Marée AFM, Cui M, Coen E. Shaping of a three-dimensional carnivorous trap through modulation of a planar growth mechanism. PLoS Biol 2019; 17:e3000427. [PMID: 31600203 PMCID: PMC6786542 DOI: 10.1371/journal.pbio.3000427] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Accepted: 09/05/2019] [Indexed: 11/18/2022] Open
Abstract
Leaves display a remarkable range of forms, from flat sheets with simple outlines to cup-shaped traps. Although much progress has been made in understanding the mechanisms of planar leaf development, it is unclear whether similar or distinctive mechanisms underlie shape transformations during development of more complex curved forms. Here, we use 3D imaging and cellular and clonal analysis, combined with computational modelling, to analyse the development of cup-shaped traps of the carnivorous plant Utricularia gibba. We show that the transformation from a near-spherical form at early developmental stages to an oblate spheroid with a straightened ventral midline in the mature form can be accounted for by spatial variations in rates and orientations of growth. Different hypotheses regarding spatiotemporal control predict distinct patterns of cell shape and size, which were tested experimentally by quantifying cellular and clonal anisotropy. We propose that orientations of growth are specified by a proximodistal polarity field, similar to that hypothesised to account for Arabidopsis leaf development, except that in Utricularia, the field propagates through a highly curved tissue sheet. Independent evidence for the polarity field is provided by the orientation of glandular hairs on the inner surface of the trap. Taken together, our results show that morphogenesis of complex 3D leaf shapes can be accounted for by similar mechanisms to those for planar leaves, suggesting that simple modulations of a common growth framework underlie the shaping of a diverse range of morphologies. Many plant and animal organs derive from tissue sheets, but how are they shaped to create the diversity of forms observed in nature? This study uses a combination of imaging and mathematical modelling to show how carnivorous plant traps shape themselves in 3D by a growth framework oriented by tissue polarity, similar to that found in planar leaves.
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Affiliation(s)
- Karen J. I. Lee
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Claire Bushell
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Yohei Koide
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - John A. Fozard
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
- Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Chunlan Piao
- College of Agriculture and Food Science, Zhejiang Agriculture and Forestry University, Linan, Zhejiang, China
| | - Man Yu
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Jacob Newman
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Christopher Whitewoods
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Jerome Avondo
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Richard Kennaway
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Athanasius F. M. Marée
- Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Minlong Cui
- College of Agriculture and Food Science, Zhejiang Agriculture and Forestry University, Linan, Zhejiang, China
- * E-mail: (EC); (MC)
| | - Enrico Coen
- Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom
- * E-mail: (EC); (MC)
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29
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Yao X, Zhang W, Duan X, Yuan Y, Zhang R, Shan H, Kong H. The making of elaborate petals in Nigella through developmental repatterning. THE NEW PHYTOLOGIST 2019; 223:385-396. [PMID: 30889278 DOI: 10.1111/nph.15799] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2019] [Accepted: 03/08/2019] [Indexed: 05/20/2023]
Abstract
Elaborate petals are present in many flowering plants lineages and have greatly promoted the success and evolutionary radiation of these groups. How elaborate petals are made, however, remains largely unclear. Petals of Nigella (Ranunculaceae) have long been recognized as elaborate and can thus be an excellent model for the study of petal elaboration. Here, by conducting detailed morphological, micromorphological, anatomical, developmental and evolutionary studies on the petals of Nigella species, we explored the processes, general patterns and underlying mechanisms of petal elaboration. We found that petals of Nigella are highly complex, and the complexity can be reflected at various levels. We also found that evolutionary elaboration of the Nigella petals is a gradual process, involving not only modifications of pre-existing structures but also de novo origination of new characters. Further investigations indicated that the elaboration and diversification of Nigella petals were accomplished by modifying the ancestral trajectory of petal development, a process known as developmental repatterning. Our results not only provide new insights into the development and evolution of elaborate petals, but also highlight the necessity of conducting multiple-level investigations for understanding the processes, patterns and underlying mechanisms of plant evolution.
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Affiliation(s)
- Xu Yao
- State Key Laboratory of Systematic and Evolutionary Botany, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Wengen Zhang
- State Key Laboratory of Systematic and Evolutionary Botany, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Xiaoshan Duan
- State Key Laboratory of Systematic and Evolutionary Botany, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Yi Yuan
- State Key Laboratory of Systematic and Evolutionary Botany, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Rui Zhang
- State Key Laboratory of Systematic and Evolutionary Botany, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Hongyan Shan
- State Key Laboratory of Systematic and Evolutionary Botany, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Hongzhi Kong
- State Key Laboratory of Systematic and Evolutionary Botany, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
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30
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Abstract
Differential growth is the driver of tissue morphogenesis in plants, and also plays a fundamental role in animal development. Although the contributions of growth to shape change have been captured through modelling tissue sheets or isotropic volumes, a framework for modelling both isotropic and anisotropic volumetric growth in three dimensions over large changes in size and shape has been lacking. Here, we describe an approach based on finite-element modelling of continuous volumetric structures, and apply it to a range of forms and growth patterns, providing mathematical validation for examples that admit analytic solution. We show that a major difference between sheet and bulk tissues is that the growth of bulk tissue is more constrained, reducing the possibility of tissue conflict resolution through deformations such as buckling. Tissue sheets or cylinders may be generated from bulk shapes through anisotropic specified growth, oriented by a polarity field. A second polarity field, orthogonal to the first, allows sheets with varying lengths and widths to be generated, as illustrated by the wide range of leaf shapes observed in nature. The framework we describe thus provides a key tool for developing hypotheses for plant morphogenesis and is also applicable to other tissues that deform through differential growth or contraction.
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Affiliation(s)
- Richard Kennaway
- Cell and Developmental Biology, John Innes Centre , Norwich , UK
| | - Enrico Coen
- Cell and Developmental Biology, John Innes Centre , Norwich , UK
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31
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Sarvepalli K, Das Gupta M, Challa KR, Nath U. Molecular cartography of leaf development - role of transcription factors. CURRENT OPINION IN PLANT BIOLOGY 2019; 47:22-31. [PMID: 30223186 DOI: 10.1016/j.pbi.2018.08.002] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Revised: 08/06/2018] [Accepted: 08/11/2018] [Indexed: 05/22/2023]
Abstract
Organ elaboration in plants occurs almost exclusively by an increase in cell number and size. Leaves, the planar lateral appendages of plants, are no exception. Forward and reverse genetic approaches have identified several genes whose role in leaf morphogenesis has been inferred from their primary effect on cell number and size, thereby distinguishing them as either promoters or inhibitors of cell proliferation and expansion. While such classification is useful in studying size control, a similar link between genes and shape generation is poorly understood. Computational modelling can provide a conceptual framework to re-evaluate the known genetic information and assign specific morphogenetic roles to the transcription factor-encoding genes. Here we discuss recent advances in our understanding of the roles of transcription factors in the planar growth of leaf lamina in two orthogonal dimensions.
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Affiliation(s)
- Kavitha Sarvepalli
- Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India
| | - Mainak Das Gupta
- Department of Comparative Development and Genetics, Max Planck Institute for Plant Breeding Research, Cologne 50829, Germany
| | - Krishna Reddy Challa
- Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India
| | - Utpal Nath
- Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
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32
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Moraes TS, Dornelas MC, Martinelli AP. FT/TFL1: Calibrating Plant Architecture. FRONTIERS IN PLANT SCIENCE 2019; 10:97. [PMID: 30815003 PMCID: PMC6381015 DOI: 10.3389/fpls.2019.00097] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2018] [Accepted: 01/21/2019] [Indexed: 05/14/2023]
Abstract
There is a very large diversity in plant architecture in nature. Over the past few years, novel theoretical concepts and analytical methods have emerged as powerful tools to understand important aspects of plant architecture. Plant architecture depends on the relative arrangement of three types of organs: leaves, shoots, and flowers. During plant development, the architecture is modulated by the balance of two homologous proteins: FLOWERING LOCUS T (FT) and TERMINAL FLOWER 1 (TFL1). The FT/TFL1 balance defines the plant growth habit as indeterminate or determinate by modulating the pattern of formation of vegetative and reproductive structures in the apical and axillary meristems. Here, we present a summarized review of plant architecture and primarily focus on the FT/TFL1 balance and its effect on plant form and development. We also propose passion fruit as a suitable model plant to study the effect of FT/TFL1 genes on plant architecture.
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Affiliation(s)
- Tatiana Souza Moraes
- Laboratório de Biotecnologia Vegetal, Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, Piracicaba, Brazil
| | - Marcelo Carnier Dornelas
- Departamento de Biologia Vegetal, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil
| | - Adriana Pinheiro Martinelli
- Laboratório de Biotecnologia Vegetal, Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, Piracicaba, Brazil
- *Correspondence: Adriana Pinheiro Martinelli,
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33
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Plus ça change, plus c'est la même chose: The developmental evolution of flowers. Curr Top Dev Biol 2019; 131:211-238. [DOI: 10.1016/bs.ctdb.2018.11.015] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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34
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Abstract
Plant leaves are differentiated organs that arise sequentially from a population of pluripotent stem cells at the shoot apical meristem (SAM). There is substantial diversity in leaf shape, much of which depends on the size and arrangement of outgrowths at the leaf margin. These outgrowths are generated by a patterning mechanism similar to the phyllotactic processes producing organs at the SAM, which involves the transcription factors CUP-SHAPED COTYLEDON and the phytohormone auxin. In the leaf, this patterning mechanism creates sequential protrusions and indentations along the margin. The size, shape, and distribution of these protrusions also depend on the overall growth of the leaf lamina. Globally, growth is regulated by a complex genetic network controlling the distribution of cell proliferation and the timing of differentiation. Evolutionary changes in margin form arise from changes in two different classes of homeobox genes that modify the outcome of marginal patterning in diverse ways, and are under intense investigation.
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Affiliation(s)
| | - Adam Runions
- Max Planck Institute for Plant Breeding Research, Cologne, Germany
| | - Mainak Das Gupta
- Max Planck Institute for Plant Breeding Research, Cologne, Germany
| | - Miltos Tsiantis
- Max Planck Institute for Plant Breeding Research, Cologne, Germany.
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35
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Reski R. Quantitative moss cell biology. CURRENT OPINION IN PLANT BIOLOGY 2018; 46:39-47. [PMID: 30036707 DOI: 10.1016/j.pbi.2018.07.005] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2018] [Revised: 06/14/2018] [Accepted: 07/05/2018] [Indexed: 06/08/2023]
Abstract
Research on mosses has provided answers to many fundamental questions in the life sciences, with the model moss Physcomitrella patens spearheading the field. Recent breakthroughs in cell biology were obtained in the quantification of chlorophyll fluorescence, signalling via calcium waves, the creation of designer organelles, gene identification in cellular reprogramming, reproduction via motile sperm and egg cells, asymmetric cell division, visualization of the actin cytoskeleton, identification of genes responsible for the shift from 2D to 3D growth, the structure and importance of the cell wall, and in the live imaging and modelling of protein networks in general. Highly standardized growth conditions, simplicity of most moss tissues, and an outstandingly efficient gene editing facilitate quantitative moss cell biology.
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Affiliation(s)
- Ralf Reski
- Plant Biotechnology, Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany; BIOSS - Centre for Biological Signalling Studies, University of Freiburg, Schänzlestr. 18, 79104 Freiburg, Germany; SGBM - Spemann Graduate School of Biology and Medicine, University of Freiburg, Albertstr. 19A, 79104 Freiburg, Germany; FIT - Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Georges-Köhler-Allee 105, 79110 Freiburg, Germany.
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36
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Cosgrove DJ. Nanoscale structure, mechanics and growth of epidermal cell walls. CURRENT OPINION IN PLANT BIOLOGY 2018; 46:77-86. [PMID: 30142487 DOI: 10.1016/j.pbi.2018.07.016] [Citation(s) in RCA: 59] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2018] [Revised: 07/19/2018] [Accepted: 07/25/2018] [Indexed: 05/02/2023]
Abstract
This article briefly reviews recent advances in nano-scale and micro-scale assessments of primary cell wall structure, mechanical behaviors and expansive growth. Cellulose microfibrils have hydrophobic and hydrophilic faces which may selectively bind different matrix polysaccharides and adjacent microfibrils. These distinctive binding interactions may guide partially aligned cellulose microfibrils in primary cell walls to form a planar, load-bearing network within each lamella of polylamellate walls. Consideration of expansive growth of cross-lamellate walls leads to a surprising inference: side-by-side sliding of microfibrils may be a key rate-limiting physical step, potentially targeted by specific wall loosening agents. Atomic force microscopy shows different patterns of microfibril movement during force-driven extension versus enzymatic loosening. Consequently, simulations of cell growth as elastic deformation of isotropic cell walls may need to be augmented to incorporate the distinctive behavior of growing cell walls.
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Affiliation(s)
- Daniel J Cosgrove
- Department of Biology, Penn State University, University Park, PA 16803, USA.
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37
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Du F, Guan C, Jiao Y. Molecular Mechanisms of Leaf Morphogenesis. MOLECULAR PLANT 2018; 11:1117-1134. [PMID: 29960106 DOI: 10.1016/j.molp.2018.06.006] [Citation(s) in RCA: 118] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2018] [Revised: 06/06/2018] [Accepted: 06/21/2018] [Indexed: 05/17/2023]
Abstract
Plants maintain the ability to form lateral appendages throughout their life cycle and form leaves as the principal lateral appendages of the stem. Leaves initiate at the peripheral zone of the shoot apical meristem and then develop into flattened structures. In most plants, the leaf functions as a solar panel, where photosynthesis converts carbon dioxide and water into carbohydrates and oxygen. To produce structures that can optimally fulfill this function, plants precisely control the initiation, shape, and polarity of leaves. Moreover, leaf development is highly flexible but follows common themes with conserved regulatory mechanisms. Leaves may have evolved from lateral branches that are converted into determinate, flattened structures. Many other plant parts, such as floral organs, are considered specialized leaves, and thus leaf development underlies their morphogenesis. Here, we review recent advances in the understanding of how three-dimensional leaf forms are established. We focus on how genes, phytohormones, and mechanical properties modulate leaf development, and discuss these factors in the context of leaf initiation, polarity establishment and maintenance, leaf flattening, and intercalary growth.
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Affiliation(s)
- Fei Du
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
| | - Chunmei Guan
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
| | - Yuling Jiao
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China.
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38
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Mansfield C, Newman JL, Olsson TSG, Hartley M, Chan J, Coen E. Ectopic BASL Reveals Tissue Cell Polarity throughout Leaf Development in Arabidopsis thaliana. Curr Biol 2018; 28:2638-2646.e4. [PMID: 30100337 PMCID: PMC6109230 DOI: 10.1016/j.cub.2018.06.019] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2018] [Revised: 05/02/2018] [Accepted: 06/11/2018] [Indexed: 11/10/2022]
Abstract
Tissue-wide polarity fields, in which cell polarity is coordinated across the tissue, have been described for planar organs such as the Drosophila wing and are considered important for coordinating growth and differentiation [1]. In planar plant organs, such as leaves, polarity fields have been identified for subgroups of cells, such as stomatal lineages [2], trichomes [3, 4], serrations [5], or early developmental stages [6]. Here, we show that ectopic induction of the stomatal protein BASL (BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE) reveals a tissue-wide epidermal polarity field in leaves throughout development. Ectopic GFP-BASL is typically localized toward the proximal end of cells and to one lobe of mature pavement cells, revealing a polarity field that aligns with the proximodistal axis of the leaf (base to tip). The polarity field is largely parallel to the midline of the leaf but diverges in more lateral positions, particularly at later stages in development, suggesting it may be deformed during growth. The polarity field is observed in the speechless mutant, showing that it is independent of stomatal lineages, and is observed in isotropic cells, showing that cell shape anisotropy is not required for orienting polarity. Ectopic BASL forms convergence and divergence points at serrations, mirroring epidermal PIN polarity patterns, suggesting a common underlying polarity mechanism. Thus, we show that similar to the situation in animals, planar plant organs have a tissue-wide cell polarity field, and this may provide a general cellular mechanism for guiding growth and differentiation. Ectopic expression of BASL in Arabidopsis leaves reveals coordinated polarity The ectopic BASL polarity field is independent of the stomatal lineage The polarity field reorients around serrations, mirroring PIN1 polarity
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Affiliation(s)
| | | | | | | | - Jordi Chan
- John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.
| | - Enrico Coen
- John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.
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39
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Abstract
The mechanisms by which organisms acquire their sizes and shapes through growth was a major focus of D'Arcy Thompson's book On Growth and Form. By applying mathematical and physical principles to a range of biological forms, Thompson achieved fresh insights, such as the notion that diverse biological shapes could be related through simple deformations of a coordinate system. However, Thompson considered genetics to lie outside the scope of his work, even though genetics was a growing discipline at the time the book was published. Here, we review how recent advances in cell, developmental, evolutionary and computational biology allow Thompson's ideas to be integrated with genes and the processes they influence to provide a deeper understanding of growth and morphogenesis. We consider how genes interact with subcellular-, cellular- and tissue-level processes in plants to yield patterns of growth that underlie the developmental and evolutionary shape transformations Thompson so eloquently described.
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Affiliation(s)
- Enrico Coen
- Department of Cell and Developmental Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK
| | - Richard Kennaway
- Department of Cell and Developmental Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK
| | - Christopher Whitewoods
- Department of Cell and Developmental Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK
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40
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Abstract
On January 12th 1877, the Grim Reaper visited Wilhelm Hofmeister (Figure 1) for the last time. Having recently witnessed the death of a wife, two daughters, and two sons (only two of his nine children survived him), the German botanist, perhaps succumbing to the weight of his own grief, suffered a series of strokes and then promptly died at the age of 52 in Lindenau, Germany. He has since faded into the dusty annals of 19th century botany, his contributions to our knowledge about plants, how they come into being, develop and interact with their environment, mostly forgotten. In an ode to Hofmeister marking 100 years since his birth, Douglas Haughton Campbell of Stanford University, referring to Hofmeister's studies in comparative morphology, wrote, "…there is no question that Hofmeister's work will remain as probably the most brilliant contribution ever made to this fundamental department of botany" [1]. And in an essay published in Plant Physiology, Donald Kaplan and Todd Cooke went further still, writing, "Frederich Wilhelm Benedikt Hofmeister stands as one of the most remarkable figures in the history of botany and one who made fundamental contributions to all areas of plant biology" [2]. If that wasn't enough, Kaplan and Cooke added "In terms of native genius, he is certainly the peer of both Darwin and Mendel and may have even exceeded them in the breadth and depth of his talents."
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