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Ou Y, Wu M, Yu Y, Liu Z, Zhang T, Zhang X. Low dose phosphorus supplementation is conducive to remediation of heavily petroleum-contaminated soil-From the perspective of hydrocarbon removal and ecotoxicity risk control. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 929:172478. [PMID: 38621545 DOI: 10.1016/j.scitotenv.2024.172478] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Revised: 04/02/2024] [Accepted: 04/12/2024] [Indexed: 04/17/2024]
Abstract
Biostimulation by supplementing of nitrogen and phosphorus nutrients is a common strategy for remediation of petroleum-polluted soils. However, the dosage influence of exogenous nitrogen or phosphorus on petroleum hydrocarbon removal and soil ecotoxicity and microbial function remain unclear. In this study, we compared the efficiencies of hydrocarbon degradation and ecotoxicity control by experiment conducted over addition of inorganic nitrogen or phosphorus at C/N ratio of 100/10, C/N/P ratio of 100/10/1, and C/P ratio of 100/1 in a heavily petroleum-contaminated loessal soil with 12,320 mg/kg of total petroleum hydrocarbon (TPH) content. A 90-day incubation study revealed that low-dose of phosphorus addition with the C/P ratio of 100/1 promoted hydrocarbon degradation and reduced soil ecotoxicity. Microbial community composition analysis suggested that phosphorus addition enriched hydrocarbon degrader Gordonia and Mycolicibacterium genus. The key enzymes EC 5.3.3.8, EC 6.2.1.20 and EC 6.4.1.1 which referred to degradation of long-chain hydrocarbons, unsaturated fatty acids and pyruvate metabolism were abundance by phosphorus supplementation. While nitrogen addition at C/N ratio of 100/10 or C/N/P ratio of 100/10/1 inhibited hydrocarbon degradation and exacerbated soil ecotoxicity due to promoting denitrification and coupling reactions with hydrocarbons. Our results suggested that low-dose phosphorus addition served as a favorable strategy to promote crude oil remediation and ecotoxicity risk control in heavily petroleum-contaminated soil. Hence, the application of suitable doses of exogenous biostimulants is an efficient approach to restore the ecological functions of organically contaminated soils.
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Affiliation(s)
- Yawen Ou
- Key Laboratory of Environmental Engineering of Shaanxi Province, School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an 710055, China; Key Laboratory of Northwest Water Resources, Environment and Ecology, Ministry of Education, Xi'an 710055, China
| | - Manli Wu
- Key Laboratory of Environmental Engineering of Shaanxi Province, School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an 710055, China; Key Laboratory of Northwest Water Resources, Environment and Ecology, Ministry of Education, Xi'an 710055, China.
| | - Ying Yu
- Key Laboratory of Environmental Engineering of Shaanxi Province, School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an 710055, China; Key Laboratory of Northwest Water Resources, Environment and Ecology, Ministry of Education, Xi'an 710055, China
| | - Zeliang Liu
- Key Laboratory of Environmental Engineering of Shaanxi Province, School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an 710055, China; Key Laboratory of Northwest Water Resources, Environment and Ecology, Ministry of Education, Xi'an 710055, China
| | - Ting Zhang
- Key Laboratory of Environmental Engineering of Shaanxi Province, School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an 710055, China; Key Laboratory of Northwest Water Resources, Environment and Ecology, Ministry of Education, Xi'an 710055, China
| | - Xuhong Zhang
- Key Laboratory of Environmental Engineering of Shaanxi Province, School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an 710055, China; Key Laboratory of Northwest Water Resources, Environment and Ecology, Ministry of Education, Xi'an 710055, China
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Zhao S, Li LL, Wang YJ, Liu ZW, Yang S, Gao X, Zhang CY, Yu AF. Remediation of petroleum-contaminated site soil by bioaugmentation with immobilized bacterial pellets stimulated by a controlled-release oxygen composite. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 356:124253. [PMID: 38851378 DOI: 10.1016/j.envpol.2024.124253] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Revised: 05/26/2024] [Accepted: 05/27/2024] [Indexed: 06/10/2024]
Abstract
Bioaugmentation techniques still show drawbacks in the cleanup of total petroleum hydrocarbons (TPHs) from petroleum-contaminated site soil. Herein, this study explored high-performance immobilized bacterial pellets (IBPs) embed Microbacterium oxydans with a high degrading capacity, and developed a controlled-release oxygen composite (CROC) that allows the efficient, long-term release of oxygen. Tests with four different microcosm incubations were performed to assess the effects of IBPs and CROC on the removal of TPHs from petroleum-contaminated site soil. The results showed that the addition of IBPs and/or CROC could significantly promote the remediation of TPHs in soil. A CROC only played a significant role in the degradation of TPHs in deep soil. The combined application of IBPs and CROC had the best effect on the remediation of deep soil, and the removal rate of TPHs reached 70%, which was much higher than that of nature attenuation (13.2%) and IBPs (43.0%) or CROC (31.9%) alone. In particular, the CROC could better promote the degradation of heavy distillate hydrocarbons (HFAs) in deep soil, and the degradation rates of HFAs increased from 6.6% to 33.2%-21.0% and 67.9%, respectively. In addition, the IBPs and CROC significantly enhanced the activity of dehydrogenase, catalase, and lipase in soil. Results of the enzyme activity were the same as that of TPH degradation. The combined application of IBPs and CROC not only increased the microbial abundance and diversity of soil, but also significantly enhanced the enrichment of potential TPH-biodegrading bacteria. M. oxydans was dominant in AP (bioaugmentation with addition of IBPs) and APO (bioaugmentation with the addition of IBPs and CROC) microcosms that added IBPs. Overall, the IBPs and CROC developed in this study provide a novel option for the combination of bioaugmentation and biostimulation for remediating organic pollutants in soil.
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Affiliation(s)
- Sheng Zhao
- State Key Laboratory of Chemical Safety, SINOPEC Research Institute of Safety Engineering Co., Ltd., Qingdao, 266100, Shandong, PR China
| | - Ling-Ling Li
- State Key Laboratory of Chemical Safety, SINOPEC Research Institute of Safety Engineering Co., Ltd., Qingdao, 266100, Shandong, PR China
| | - Yue-Jie Wang
- State Key Laboratory of Chemical Safety, SINOPEC Research Institute of Safety Engineering Co., Ltd., Qingdao, 266100, Shandong, PR China.
| | - Zheng-Wei Liu
- State Key Laboratory of Chemical Safety, SINOPEC Research Institute of Safety Engineering Co., Ltd., Qingdao, 266100, Shandong, PR China
| | - Shuai Yang
- State Key Laboratory of Chemical Safety, SINOPEC Research Institute of Safety Engineering Co., Ltd., Qingdao, 266100, Shandong, PR China
| | - Xiang Gao
- State Key Laboratory of Chemical Safety, SINOPEC Research Institute of Safety Engineering Co., Ltd., Qingdao, 266100, Shandong, PR China
| | - Chang-Yun Zhang
- State Key Laboratory of Chemical Safety, SINOPEC Research Institute of Safety Engineering Co., Ltd., Qingdao, 266100, Shandong, PR China
| | - An-Feng Yu
- State Key Laboratory of Chemical Safety, SINOPEC Research Institute of Safety Engineering Co., Ltd., Qingdao, 266100, Shandong, PR China
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Ruan Z, Chen K, Cao W, Meng L, Yang B, Xu M, Xing Y, Li P, Freilich S, Chen C, Gao Y, Jiang J, Xu X. Engineering natural microbiomes toward enhanced bioremediation by microbiome modeling. Nat Commun 2024; 15:4694. [PMID: 38824157 PMCID: PMC11144243 DOI: 10.1038/s41467-024-49098-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2022] [Accepted: 05/21/2024] [Indexed: 06/03/2024] Open
Abstract
Engineering natural microbiomes for biotechnological applications remains challenging, as metabolic interactions within microbiomes are largely unknown, and practical principles and tools for microbiome engineering are still lacking. Here, we present a combinatory top-down and bottom-up framework to engineer natural microbiomes for the construction of function-enhanced synthetic microbiomes. We show that application of herbicide and herbicide-degrader inoculation drives a convergent succession of different natural microbiomes toward functional microbiomes (e.g., enhanced bioremediation of herbicide-contaminated soils). We develop a metabolic modeling pipeline, SuperCC, that can be used to document metabolic interactions within microbiomes and to simulate the performances of different microbiomes. Using SuperCC, we construct bioremediation-enhanced synthetic microbiomes based on 18 keystone species identified from natural microbiomes. Our results highlight the importance of metabolic interactions in shaping microbiome functions and provide practical guidance for engineering natural microbiomes.
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Affiliation(s)
- Zhepu Ruan
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642, China
| | - Kai Chen
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China
| | - Weimiao Cao
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China
| | - Lei Meng
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China
| | - Bingang Yang
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China
| | - Mengjun Xu
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China
| | - Youwen Xing
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China
| | - Pengfa Li
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China
| | - Shiri Freilich
- Newe Ya'ar Research Center, Agricultural Research Organization, P.O. Box 1021, Ramat Yishay, 30095, Israel
| | - Chen Chen
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China
| | - Yanzheng Gao
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
| | - Jiandong Jiang
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China.
| | - Xihui Xu
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing, 210095, China.
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Gao M, Li X, Zhang Q, Li S, Wu S, Wang Y, Sun H. Spatial distribution of volatile organic compounds in contaminated soil and distinct microbial effect driven by aerobic and anaerobic conditions. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 927:172256. [PMID: 38583613 DOI: 10.1016/j.scitotenv.2024.172256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 04/01/2024] [Accepted: 04/04/2024] [Indexed: 04/09/2024]
Abstract
The vertical distribution of 35 volatile organic compounds (VOCs) was investigated in soil columns from two obsolete industrial sites in Eastern China. The total concentrations of ΣVOCs in surface soils (0-20 cm) were 134-1664 ng g-1. Contamination of VOCs in surface soil exhibited remarkable variability, closely related to previous production activities at the sampling sites. Additionally, the concentrations of ΣVOCs varied with increasing soil depth from 0 to 10 m. Soils at depth of 2 m showed ΣVOCs concentrations of 127-47,389 ng g-1. Among the studied VOCs, xylene was the predominant contaminant in subsoils (2 m), with concentrations ranging from n.d. to 45,400 ng g-1. Chlorinated alkanes and olefins demonstrated a greater downward migration ability compared to monoaromatic hydrocarbons, likely due to their lower hydrophobicity. As a result, this vertical distribution of VOCs led to a high ecological risk in both the surface and deep soil. Notably, the risk quotient (RQ) of xylene in subsoil (2 m, RQ up to 319) was much higher than that in surface soil. Furthermore, distinct effects of VOCs on soil microbes were observed under aerobic and anaerobic conditions. Specifically, after the 30-d incubation of xylene-contaminated soil, Ilumatobacter was enriched under aerobic condition, whereas Anaerolineaceae was enriched under anaerobic condition. Moreover, xylene contamination significantly affected methylotrophy and methanol oxidation functions for aerobic soil (t-test, p < 0.05). However, aromatic compound degradation and ammonification were significantly enhanced by xylene in anaerobic soil (t-test, p < 0.05). These findings suggest that specific VOC compound has distinct microbial ecological effects under different oxygen content conditions in soil. Therefore, when conducting soil risk assessments of VOCs, it is crucial to consider their ecological effects at different soil depths.
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Affiliation(s)
- Meng Gao
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Xuelin Li
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Qiuyue Zhang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Siyuan Li
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Shanxing Wu
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Yu Wang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China.
| | - Hongwen Sun
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
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Ma M, An N, Wang Y, Zhao C, Cui Z, Zhou W, Gu M, Li Q. Sulfur-containing iron carbon nanocomposites activate persulfate for combined chemical oxidation and microbial remediation of petroleum-polluted soil. JOURNAL OF HAZARDOUS MATERIALS 2024; 469:133889. [PMID: 38422735 DOI: 10.1016/j.jhazmat.2024.133889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Revised: 02/08/2024] [Accepted: 02/23/2024] [Indexed: 03/02/2024]
Abstract
In this study, sulfur-containing iron carbon nanocomposites (S@Fe-CN) were synthesized by calcining iron-loaded biomass and utilized to activate persulfate (PS) for the combined chemical oxidation and microbial remediation of petroleum-polluted soil. The highest removal efficiency of total petroleum hydrocarbons (TPHs) was achieved at 0.2% of activator, 1% of PS and 1:1 soil-water ratio. The EPR and quenching experiments demonstrated that the degradation of TPHs was caused by the combination of 1O2,·OH, SO4·-, and O2·-. In the S@Fe-CN activated PS (S@Fe-CN/PS) system, the degradation of TPHs underwent two phases: chemical oxidation (days 0 to 3) and microbial degradation (days 3 to 28), with kinetic constants consistent with the pseudo-first-order kinetics of chemical and microbial remediation, respectively. In the S@Fe-CN/PS system, soil enzyme activities decreased and then increased, indicating that microbial activities were restored after chemical oxidation under the protection of the activators. The microbial community analysis showed that the S@Fe-CN/PS group affected the abundance and structure of microorganisms, with the relative abundance of TPH-degrading bacteria increased after 28 days. Moreover, S@Fe-CN/PS enhanced the microbial interactions and mitigated microbial competition, thereby improving the ability of indigenous microorganisms to degrade TPHs.
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Affiliation(s)
- Mengyu Ma
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao 266200, PR China
| | - Ning An
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao 266200, PR China
| | - Yanqin Wang
- Shandong Academy of Agricultural Sciences, Jinan 250100, PR China
| | - Chao Zhao
- Shandong Provincial Soil Pollution Prevention and Control Centre, Jinan 250012, PR China
| | - Zhaojie Cui
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao 266200, PR China
| | - Weizhi Zhou
- School of Civil Engineering, Shandong University, Jinan 250100, PR China
| | - Meixia Gu
- Sinopec Petroleum Engineering & Design Co., Ltd., Dongying 257100, PR China
| | - Qian Li
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Qingdao 266200, PR China.
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6
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Lee KC, Archer SDJ, Kansour MK, Al-Mailem DM. Bioremediation of oily hypersaline soil via autochthonous bioaugmentation with halophilic bacteria and archaea. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 922:171279. [PMID: 38428597 DOI: 10.1016/j.scitotenv.2024.171279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Revised: 02/21/2024] [Accepted: 02/23/2024] [Indexed: 03/03/2024]
Abstract
Kuwaiti hypersaline soil samples were contaminated with 5 % (w/w) weathered Kuwaiti light crude oil and bioaugmented with autochthonous halophilic hydrocarbonoclastic archaeal and bacterial strains, two each, individually and as consortia. Residual oil contents were determined, and microbial communities were analyzed by culture-dependent and culture-independent approaches initially and seasonally for one year. After one year of the bioremediation process, the mean oil degradation rate was similar across all treated soils including the controlled unbioaugmented one. Oil hydrocarbons were drastically reduced in all soil samples with values ranging from 82.7 % to 93 %. During the bioremediation process, the number of culturable oil-degrading bacteria increased to a range of 142 to 344 CFUx104 g-1 after 12 months of bioaugmentation. Although culture-independent analysis showed a high proportion of inoculants initially, none could be cultured throughout the bioremediation procedure. Within a year, microbial communities changed continually, and 33 species of halotolerant/halophilic hydrocarbonoclastic bacteria were isolated and identified belonged mainly to the three major bacterial phyla Actinobacteria, Proteobacteria, and Firmicutes. The archaeal phylum Halobacterota represented <1 % of the microbial community's relative abundance, which explains why none of its members were cultured. Improving the biodegradability of an already balanced environment by autochthonous bioaugmentation is more involved than just adding the proper oil degraders. This study emphasizes the possibility of a relatively large resistant population, a greater diversity of oil-degrading microorganisms, and the highly selective impacts of oil contamination on hypersaline soil bacterial communities.
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Affiliation(s)
- Kevin C Lee
- School of Science, Faculty of Health and Environmental Science, Auckland University of Technology, Auckland 1010, New Zealand.
| | - Stephen D J Archer
- AgResearch Limited, Grasslands Research Centre, Palmerston North 4442, New Zealand.
| | - Mayada K Kansour
- Microbiology Program, Department of Biological Sciences, Faculty of Science, Kuwait University, P. O. Box 5969, Safat 13060, Kuwait.
| | - Dina M Al-Mailem
- Microbiology Program, Department of Biological Sciences, Faculty of Science, Kuwait University, P. O. Box 5969, Safat 13060, Kuwait.
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Huang Y, Tang Y, Liang Y, Xie Z, Wu J, Huang J, Wei S, Nie S, Jiang T. Transport and retention of n-hexadecane in cadmium-/naphthalene-contaminated calcareous soil sampled in a karst area. ENVIRONMENTAL GEOCHEMISTRY AND HEALTH 2023; 45:8881-8895. [PMID: 37358714 DOI: 10.1007/s10653-023-01664-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2022] [Accepted: 06/13/2023] [Indexed: 06/27/2023]
Abstract
Studying the transport of petroleum hydrocarbons in cadmium-/naphthalene-contaminated calcareous soils is crucial to comprehensive assessment of environmental risks and developing appropriate strategies to remediate petroleum hydrocarbons pollution in karst areas. In this study, n-hexadecane was selected as a model petroleum hydrocarbon. Batch experiments were conducted to explore the adsorption behavior of n-hexadecane on cadmium-/naphthalene-contaminated calcareous soils at various pH, and column experiments were performed to investigate the transport and retention of n-hexadecane under various flow velocity. The results showed that Freundlich model better described the adsorption behavior of n-hexadecane in all cases (R2 > 0.9). Under the condition of pH = 5, it was advantageous for soil samples to adsorb more n-hexadecane, and the maximum adsorption content followed the order of: cadmium/naphthalene-contaminated > uncontaminated soils. The transport of n-hexadecane in cadmium/naphthalene-contaminated soils at various flow velocity was well described by two kinetic sites model of Hydrus-1D with R2 > 0.9. Due to the increased electrostatic repulsion between n-hexadecane and soil particles, n-hexadecane was more easily able to breakthrough cadmium/naphthalene-contaminated soils. Compared to low flow velocity (1 mL/min), a higher concentration of n-hexadecane was determined at high flow velocity, with 67, 63, and 45% n-hexadecane in effluent from cadmium-contaminated soils, naphthalene-contaminated soils, and uncontaminated soils, respectively. These findings have important implications for the government of groundwater in calcareous soils from karst areas.
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Affiliation(s)
- Yiting Huang
- School of Civil Engineering and Architecture, Guangxi University, Nanning, 530004, China
| | - Yankui Tang
- School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China.
| | - Yi Liang
- School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China
| | - Zhenze Xie
- School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China
| | - Jipeng Wu
- School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China
| | - Jiajie Huang
- School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China
| | - Shanxiong Wei
- School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China
| | - Shaojiang Nie
- School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China
| | - Tao Jiang
- School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China
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Singha NA, Neihsial R, Kipgen L, Lyngdoh WJ, Nongdhar J, Chettri B, Singh P, Singh AK. Taxonomic and Predictive Functional Profile of Hydrocarbonoclastic Bacterial Consortia Developed at Three Different Temperatures. Curr Microbiol 2023; 81:22. [PMID: 38017305 DOI: 10.1007/s00284-023-03529-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Accepted: 10/19/2023] [Indexed: 11/30/2023]
Abstract
Microbial community exhibit shift in composition in response to temperature variation. We report crude oil-degrading activity and high-throughput 16S rRNA gene sequencing (metagenome) profiles of four bacterial consortia enriched at three different temperatures in crude oil-amended Bushnell-Hass Medium from an oily sludge sediment. The consortia were referred to as O (4 ± 2 ℃ in 3% w/v crude oil), A (25 ± 2 ℃ in 1% w/v crude oil), H (25 ± 2 ℃ in 3% w/v crude oil), and X (45 ± 2 ℃ in 3% w/v crude oil). The hydrocarbon-degrading activity was highest for consortium A and H and lowest for consortium O. The metagenome profile revealed the predominance of Proteobacteria (62.12-1.25%) in each consortium, followed by Bacteroidota (18.94-37.77%) in the consortium O, A, and H. Contrarily, consortium X comprised 7.38% Actinomycetota, which was essentially low (< 0.09%) in other consortia, and only 0.41% Bacteroidota. The PICRUSt-based functional analysis predicted major functions associated with the metabolism and 5060 common KEGG Orthology (KOs). A total of 296 KOs were predicted exclusively in consortium X. Additionally, 247 KOs were predicted from xenobiotic biodegradation pathways. This study found that temperature had a stronger influence on the composition and function of the bacterial community than crude oil concentration.
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Affiliation(s)
- Ningombam A Singha
- Department of Biochemistry, North-Eastern Hill University, Shillong, 793022, India
| | - Roselin Neihsial
- Department of Biochemistry, North-Eastern Hill University, Shillong, 793022, India
| | - Lhinglamkim Kipgen
- Department of Biochemistry, North-Eastern Hill University, Shillong, 793022, India
| | - Waniabha J Lyngdoh
- Department of Biochemistry, North-Eastern Hill University, Shillong, 793022, India
| | - Jopthiaw Nongdhar
- Department of Biochemistry, North-Eastern Hill University, Shillong, 793022, India
| | - Bobby Chettri
- Department of Biochemistry, North-Eastern Hill University, Shillong, 793022, India
| | - Prabhakar Singh
- Department of Biochemistry, North-Eastern Hill University, Shillong, 793022, India.
| | - Arvind K Singh
- Department of Biochemistry, North-Eastern Hill University, Shillong, 793022, India
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9
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Ezugwu BU, Bala JD, Abioye OP, Oyewole OA. Phycoremediation of crude oil polluted water from selected water sources in Ogoniland, Rivers State, Nigeria. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:111916-111935. [PMID: 37544945 DOI: 10.1007/s11356-023-29004-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2022] [Accepted: 07/22/2023] [Indexed: 08/08/2023]
Abstract
Crude oil exploitation in the Niger Delta, particularly in Ogoniland, brought environmental devastation occasioned by petroleum pollution, as farmlands and water sources were destroyed. This study was designed to remediate crude oil contaminated water obtained from water sources in Ogoniland using two green algal species. Thirty water samples were collected from eight different water sources. The samples were analysed for total petroleum hydrocarbon (TPH) using gas chromatography/flame ionization detector (GC/FID). Algal samples were collected from Ogba River and at wetland in Military Hospital Benin, Edo State, Nigeria. The algal samples were identified, screened, optimized and grown in Bold basal medium. Results obtained from the determination of TPH showed that the infiltrated pond (Exc) sample site had the highest concentration among all the sites sampled with 198.8329 μg/L, R2 with 134.1296 μg/L, R1 with 108.9394 μg/L, R3 with 105.8011 μg/L, R4 with 98.442 8 μg/L, the hand-dug wells (Wll) had 9.6586 μg/L while the borehole (Bhl) had the lowest with 1.8310 μg/L. It was deduced that pollution of water sources was principally because of pollutants washed from the soil environment into the open surface water sources via run-off rather than through the seepage from the underground aquifers, incriminating illegal oil mining and artisanal refining. Results obtained from the analysis of algal growth medium indicated that the two algal species were able to absorb the hydrocarbon contaminants, albeit at different rates, corresponding with the algal growth rate. Analysis of algal biomass after 4 weeks of remediation showed that from the initial 10.27 μg/20 mL added to the growth medium, the highest TPH mean value of 0.490 μg/20 mL was extracted from Ulothrix zonata (F.Weber & Mohr) Kützing biomass grown in Exc compared to 0.344 μg/20 mL of TPH extracted from Chlorella sorokiniana Shihira & R.W.Krauss grown in the same sample site. Also, Ulothrix zonata had higher TPH yield 0.023 μg/20 mL in Bhl compared to Chlorella sorokiniana 0.021 μg/20 mL of TPH from the same water source. This result indicated Ulothrix zonata had superior TPH phycoremediation ability to Chlorella sorokiniana. While the present study calls for deployment of the algal species for field trial, it is strongly recommended that crude oil pollution should be discouraged.
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Affiliation(s)
- Basil Utazi Ezugwu
- Department of Microbiology, School of Life Sciences, Federal University of Technology, Niger State, Minna, Nigeria
| | - Jeremiah David Bala
- Department of Microbiology, School of Life Sciences, Federal University of Technology, Niger State, Minna, Nigeria
- African Center of Excellence for Mycotoxin and Food Safety, Federal University of Technology, Niger State, Minna, Nigeria
| | - Olabisi Peter Abioye
- Department of Microbiology, School of Life Sciences, Federal University of Technology, Niger State, Minna, Nigeria
| | - Oluwafemi Adebayo Oyewole
- Department of Microbiology, School of Life Sciences, Federal University of Technology, Niger State, Minna, Nigeria.
- African Center of Excellence for Mycotoxin and Food Safety, Federal University of Technology, Niger State, Minna, Nigeria.
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10
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Lan J, Wen F, Ren Y, Liu G, Jiang Y, Wang Z, Zhu X. An overview of bioelectrokinetic and bioelectrochemical remediation of petroleum-contaminated soils. ENVIRONMENTAL SCIENCE AND ECOTECHNOLOGY 2023; 16:100278. [PMID: 37251519 PMCID: PMC10220241 DOI: 10.1016/j.ese.2023.100278] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 03/31/2023] [Accepted: 04/03/2023] [Indexed: 05/31/2023]
Abstract
The global problem of petroleum contamination in soils seriously threatens environmental safety and human health. Current studies have successfully demonstrated the feasibility of bioelectrokinetic and bioelectrochemical remediation of petroleum-contaminated soils due to their easy implementation, environmental benignity, and enhanced removal efficiency compared to bioremediation. This paper reviewed recent progress and development associated with bioelectrokinetic and bioelectrochemical remediation of petroleum-contaminated soils. The working principles, removal efficiencies, affecting factors, and constraints of the two technologies were thoroughly summarized and discussed. The potentials, challenges, and future perspectives were also deliberated to shed light on how to overcome the barriers and realize widespread implementation on large scales of these two technologies.
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Affiliation(s)
- Jun Lan
- Shaanxi Key Laboratory of Environmental Engineering, School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, China
| | - Fang Wen
- Xinjiang Academy of Environmental Protection Science, Urumqi, 830011, China
| | - Yongxiang Ren
- Shaanxi Key Laboratory of Environmental Engineering, School of Environmental and Municipal Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, China
| | - Guangli Liu
- Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou, 510006, China
| | - Yi Jiang
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Kowloon, Hong Kong, China
| | - Zimeng Wang
- Department of Environmental Science and Engineering, Fudan University, Shanghai, 200433, China
| | - Xiuping Zhu
- Department of Environmental Science and Engineering, Fudan University, Shanghai, 200433, China
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11
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Liu Z, Li Z, Chen S, Zhou W. Enhanced phytoremediation of petroleum-contaminated soil by biochar and urea. JOURNAL OF HAZARDOUS MATERIALS 2023; 453:131404. [PMID: 37080026 DOI: 10.1016/j.jhazmat.2023.131404] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 03/09/2023] [Accepted: 04/11/2023] [Indexed: 05/03/2023]
Abstract
Application of bioremediation in petroleum-contaminated soils is limited by its low efficiency. Although biochar and urea are commonly used soil additives, their potential beneficial effect on the bioremediation of petroleum contamination have rarely been discussed. In this study, biochar and urea were combined to test their effects on the phytoremediation of petroleum-contaminated soil in pot experiments. Our results showed that the degradation rate of total petroleum hydrocarbons reached 49.6%, 38.3%, 42.5%, and 77.9% when the soil was treated with biochar, urea, ryegrass, and their integrated application treatment (PBCN), respectively. A number of soil physicochemical properties (e.g., pH, elements, aggregate distribution, and organic matter composition) altered by the treatments were found to be linked to the accelerated degradation of petroleum hydrocarbons. The activities of soil dehydrogenase, lipase, and urease, and the abundances of 16 s rRNA gene and alkane degradation-related genes could be increased simultaneously when biochar, urea, and ryegrass were co-applied. Furthermore, urea significantly reduced soil bacterial α-diversity, while soil bacterial community dissimilation was mainly driven by urea and ryegrass. Lysobacter, xanthomonadaceae, and longimicrobia could be biomarker species in the PBCN group. Soil bacterial network analysis showed that biochar and urea application decreased the network complexity and robustness, while ryegrass behaved inversely. Lastly, soil metabolomic analysis revealed that root soil metabolites were greatly affected by urea-addition during phytoremediation, and co-application of biochar and urea could activate the putative metabolism pathway of petroleum hydrocarbons in root soil (e.g., naphthalene and anthracene degradation, and pyruvate metabolism). In summary, this study confirmed the enhancement of biochar and urea application in the phytoremediation of petroleum-contaminated soil and explored the internal mechanism of the interactive effect, which can potentially improve the development of eco-friendly and cost-effective in-situ bioremediation technology for petroleum-contaminated soils.
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Affiliation(s)
- Zhe Liu
- School of Environmental Science and Engineering, Shandong University, Jinan, Shandong, PR China
| | - Zhe Li
- School of Civil Engineering, Shandong University, Jinan, Shandong, PR China
| | - Shigeng Chen
- Shandong Nongda Fertilizer Sci.&Tech. Co., Ltd., Taian, Shandong, PR China
| | - Weizhi Zhou
- School of Civil Engineering, Shandong University, Jinan, Shandong, PR China.
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12
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Zhou H, Liu Q, Jiang L, Shen Q, Chen C, Zhang C, Tang J. Enhanced remediation of oil-contaminated intertidal sediment by bacterial consortium of petroleum degraders and biosurfactant producers. CHEMOSPHERE 2023; 330:138763. [PMID: 37094722 DOI: 10.1016/j.chemosphere.2023.138763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Revised: 04/17/2023] [Accepted: 04/21/2023] [Indexed: 05/03/2023]
Abstract
Oil pollution in intertidal zones is an important environmental issue that has serious adverse effects on coastal ecosystems. This study investigated the efficacy of a bacterial consortium constructed from petroleum degraders and biosurfactant producers in the bioremediation of oil-polluted sediment. Inoculation of the constructed consortium significantly enhanced the removal of C8-C40n-alkanes (80.2 ± 2.8% removal efficiency) and aromatic compounds (34.4 ± 10.8% removal efficiency) within 10 weeks. The consortium played dual functions of petroleum degradation and biosurfactant production, greatly improving microbial growth and metabolic activities. Real-time quantitative polymerase chain reaction (PCR) showed that the consortium markedly increased the proportions of indigenous alkane-degrading populations (up to 3.88-times higher than that of the control treatment). Microbial community analysis demonstrated that the exogenous consortium activated the degradation functions of indigenous microflora and promoted synergistic cooperation among microorganisms. Our findings indicated that supplementation of a bacterial consortium of petroleum degraders and biosurfactant producers is a promising bioremediation strategy for oil-polluted sediments.
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Affiliation(s)
- Hanghai Zhou
- Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, PR China
| | - Qing Liu
- Institute of Marine Biology and Pharmacology, Ocean College, Zhejiang University, Zhoushan, Zhejiang, PR China; College of Environmental Science and Engineering, Guilin University of Technology, Guilin, Guangxi, PR China
| | - Lijia Jiang
- Institute of Marine Biology and Pharmacology, Ocean College, Zhejiang University, Zhoushan, Zhejiang, PR China
| | - Qi Shen
- Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, PR China
| | - Chunlei Chen
- Institute of Marine Biology and Pharmacology, Ocean College, Zhejiang University, Zhoushan, Zhejiang, PR China
| | - Chunfang Zhang
- Institute of Marine Biology and Pharmacology, Ocean College, Zhejiang University, Zhoushan, Zhejiang, PR China.
| | - Jiangwu Tang
- Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, PR China.
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13
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Chunyan X, Qaria MA, Qi X, Daochen Z. The role of microorganisms in petroleum degradation: Current development and prospects. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 865:161112. [PMID: 36586680 DOI: 10.1016/j.scitotenv.2022.161112] [Citation(s) in RCA: 15] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Revised: 12/04/2022] [Accepted: 12/18/2022] [Indexed: 06/17/2023]
Abstract
Petroleum hydrocarbon compounds are persistent organic pollutants, which can cause permanent damage to ecosystems due to their biomagnification. Bioremediation of oil is currently the main solution for the remediation of petroleum hydrocarbon pollutants in ecosystems. Despite several lab studies on oil microbial biodegradation efficiency, still there are various challenges for microorganisms to perform efficiently in outside environments. Herewith, investigating efficient biodegradation technologies through discovering new microorganisms, biodegradation pathways modification, and new bioremediations technologies are in great demand. The degradation of petroleum pollutants by microorganisms and the remediation of contaminated soils are achieved through their key enzymes and metabolic pathways. Although, several challenges hinder the effective biodegradation processes such as the toxic environment, long chains and versatility of petroleum hydrocarbons and the existence of the full metabolism pathways in a single microorganism. There are several developed oil biodegradation strategies by microorganisms such as synthetic biology, biofilm, recombinant technology and microbial consortia. Herewith, the application of multi-omics technology to discover oil-contaminated environments microbial communities, synthetic biology, microbial consortia, and other technologies would help improve the efficiency of microbial remediation.
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Affiliation(s)
- Xu Chunyan
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, Jiangsu, China
| | - Majjid A Qaria
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, Jiangsu, China
| | - Xu Qi
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, Jiangsu, China
| | - Zhu Daochen
- Biofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, Jiangsu, China.
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14
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Wang S, Cheng F, Guo S. Highly efficient screening and optimal combination of functional isolates for bioremediation of hydrocarbon-polluted soil. ENVIRONMENTAL RESEARCH 2023; 219:115064. [PMID: 36549230 DOI: 10.1016/j.envres.2022.115064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2022] [Revised: 12/10/2022] [Accepted: 12/12/2022] [Indexed: 06/17/2023]
Abstract
The key to enhancing the efficacy of bioremediation of hydrocarbon-contaminated soil is the precise and highly efficient screening of functional isolates. Low screening effectiveness, narrow screening range and an unstable structure of the constructed microflora during bioremediation are the shortcomings of the traditional shaking culture (TSC) method. To improve the secondary screening of isolates and microflora implemented for alkane degradation, this work evaluated the characterization relationship between bacterial function and enzyme activity and devised an enzyme activity assay (EAA) method. The results indicated a substantial positive correlation (r = 0.97) between 24 candidate isolates and their whole enzymes, proving that whole enzyme activity properly reflects the metabolic functions of microorganisms. The functional analysis of the isolates demonstrated that the EAA method in conjunction with microbial abundance and metabolite determination could broaden the screening range of functional isolates, including aliphatic acid-metabolizing isolates (isolates H4 and H7) and aliphatic acid-sensitive isolates (isolate H2) with n-hexadecane degradation ability. The EAA method also guided the construction of functional microflora and optimized the mode of application using combinations of alkane-degrading bacteria and aliphatic acid-degrading bacteria successively (e.g., F1+H7+H7). The combinations maintained a high abundance of functional isolates and stable α diversity and community composition throughout the experiment, which contributed to more advanced alkane degradation and mineralization ability (p < 0.01). Assuming a workload of 100 tests, the screening efficiency of the EAA method is more than 16 times that of the TSC method, and the greater the quantity of isolates, the higher the screening efficiency, enabling high-throughput screening. In conclusion, the EAA method has a broad-spectrum, accurate and highly efficient screening ability for functional isolates and microflora, which can provide intensive technical support for the development of bioremediation materials and the application of bioremediation technology.
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Affiliation(s)
- Sa Wang
- Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, 110016, China; National-Local Joint Engineering Laboratory of Contaminated Soil Remediation By Bio-physicochemical Synergistic Process, Shenyang, 110016, China
| | - Fenglian Cheng
- Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, 110016, China; National-Local Joint Engineering Laboratory of Contaminated Soil Remediation By Bio-physicochemical Synergistic Process, Shenyang, 110016, China
| | - Shuhai Guo
- Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, 110016, China; National-Local Joint Engineering Laboratory of Contaminated Soil Remediation By Bio-physicochemical Synergistic Process, Shenyang, 110016, China.
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15
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Sajid S, de Dios VR, Zveushe OK, Nabi F, Shen S, Kang Q, Zhou L, Ma L, Zhang W, Zhao Y, Han Y, Dong F. Newly isolated halotolerant Aspergillus sp. showed high diesel degradation efficiency under high salinity environment aided with hematite. JOURNAL OF HAZARDOUS MATERIALS 2023; 443:130324. [PMID: 36444053 DOI: 10.1016/j.jhazmat.2022.130324] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Revised: 10/28/2022] [Accepted: 11/02/2022] [Indexed: 06/16/2023]
Abstract
The contamination of saline soil with hazardous petroleum hydrocarbons is a common problem across coastal areas globally. Bioaugmentation combined with chemical treatment is an emerging remediation technique, but it currently shows low efficiency under high saline environments. In this study, we screened and used a novel halotolerant lipolytic fungal consortium (HLFC) combined with hematite (Fe2O3) for the bioremediation of diesel contaminated saline soils. The changes in total petroleum hydrocarbons (TPH) concentrations, enzyme activity, and microbial diversity were compared among different treatments (HLFC, hematite, hematite-HLFC, and control). The results showed that TPH degradation was significantly (P < 0.05) enhanced in hematite-HLFC (47.59-88.01%) and HLFC (24.26-72.04%) amended microcosms across all salinity levels, compared to the treatments of hematite (23.71-66.26%) and control (6.39-55.20%). TPH degradation was positively correlated with lipase and laccase enzyme activities, electrical conductivity, and the water holding capacity of the soil. Analyses of the microbial community structure showed that microbial richness decreased, while evenness increased in HLFC and hematite-HLFC treatments. The relative abundances of Alicyclobacillus, Sediminibacillus, Alcanivorax, Penicillium, Aspergillus, and Candida genera were significantly high in hematite-HLFC and HLFC amended microcosms. Our findings provide a promising new microbial-based technique, which can degrade TPH efficiently in saline soil.
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Affiliation(s)
- Sumbal Sajid
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang 621010, China
| | - Víctor Resco de Dios
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang 621010, China; Joint Research Unit CTFC-AGROTECNIO, Universitat de Lleida, 25198 Lérida, Spain
| | - Obey Kudakwashe Zveushe
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang 621010, China
| | - Farhan Nabi
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang 621010, China
| | - Songrong Shen
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang 621010, China
| | - Qianlin Kang
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang 621010, China
| | - Lei Zhou
- Fundamental Science on Nuclear Wastes and Environmental Safety Laboratory, Southwest University of Science and Technology, Mianyang 621010, China
| | - Lin Ma
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang 621010, China
| | - Wei Zhang
- School of Environment and Resource, Southwest University of Science and Technology, Mianyang, Sichuan 621010, China; Center of Analysis and Testing, Southwest University of Science and Technology, Mianyang, Sichuan 621010, China
| | - Yulian Zhao
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang 621010, China
| | - Ying Han
- School of Life Sciences and Engineering, Southwest University of Science and Technology, Mianyang 621010, China.
| | - Faqin Dong
- School of Environment and Resource, Southwest University of Science and Technology, Mianyang, Sichuan 621010, China; Key Laboratory of Solid Waste Treatment and Resource Recycle, Southwest University of Science and Technology, Mianyang, Sichuan 621010, China.
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16
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Ali M, Song X, Wang Q, Zhang Z, Che J, Chen X, Tang Z, Liu X. Mechanisms of biostimulant-enhanced biodegradation of PAHs and BTEX mixed contaminants in soil by native microbial consortium. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 318:120831. [PMID: 36509345 DOI: 10.1016/j.envpol.2022.120831] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Revised: 11/29/2022] [Accepted: 12/04/2022] [Indexed: 06/17/2023]
Abstract
Despite the co-occurrence of polycyclic aromatic hydrocarbons (PAHs) and benzene, toluene, ethylbenzene, and xylene (BTEX) in the field, to date, knowledge on the bioremediation of benzene and benzo[a]pyrene (BaP) mixed contaminants is limited. In this study, the mechanisms underlying the biodegradation of benzene and BaP under individual and co-contaminated conditions followed by the enhanced biodegradation using methanol, ethanol, and vegetable oil as biostimulants were investigated. The results demonstrated that the benzene biodegradation was highly reduced under the co-contaminated condition compared to the individual benzene contamination, whereas the BaP biodegradation was slightly enhanced with the co-contamination of benzene. Moreover, biostimulation significantly improved the biodegradation of both contaminants under co-contaminated conditions. A trend of significant reduction in the bioavailable BaP contents was observed in all biostimulant-enhanced groups, implying that the bioavailable BaP was the preferred biodegradable BaP fraction. Furthermore, the enzymatic activity analysis revealed a significant increase in lipase and dehydrogenase (DHA) activities, as well as a reduction in the catalase and polyphenol oxidase, suggesting that the increased hydrolysis of fats and proton transfer, as well as the reduced oxidative stress, contributed to the enhanced benzene and BaP biodegradation in the vegetable oil treatment. In addition, the microbial composition analysis results demonstrated that the enriched functional genera contributed to the increased biodegradation efficiency, and the functional genera in the microbial consortium responded differently to different biostimulants, and competitive growth was observed in the biostimulant-enhanced treatments. In addition, the enrichment of Pseudomonas and Rhodococcus species was noticed during the biostimulation of benzene and BaP co-contamination soil, and was positively correlated with the DHA enzyme activities, indicating that these species encode DHA genes which contributed to the higher biodegradation. In conclusion, multiple lines of evidence were provided to shed light on the mechanisms of biostimulant-enhanced biodegradation of PAHs and BTEX co-contamination with native microbial consortiums.
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Affiliation(s)
- Mukhtiar Ali
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Xin Song
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China.
| | - Qing Wang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Zhuanxia Zhang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Jilu Che
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Xing Chen
- China Construction 8th Engineering Division Corp., LTD, Shanghai, 200122, China
| | - Zhiwen Tang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Xin Liu
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
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17
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Basim Y, Mohebali G, Jorfi S, Nabizadeh R, Moghadam MA, Ghadiri A, Haghighi Fard NJ. Bacterial strains diversity in contaminated soils and their potential for bioremediation of total petroleum hydrocarbons in south west of Iran. JOURNAL OF ENVIRONMENTAL HEALTH SCIENCE & ENGINEERING 2022; 20:601-608. [PMID: 36406594 PMCID: PMC9672257 DOI: 10.1007/s40201-020-00592-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2020] [Accepted: 12/08/2020] [Indexed: 06/16/2023]
Abstract
PURPOSE The main purpose of this research was investigating of bioremediation potential oily contaminated soils using native bacterial strains in an oil field. METHODS In this research, total bacterial consortium were identified in oily soils with sandy loam texture as case and non-contaminated soils as controls during six months. The dominant strains present on contaminated soil were identified by DNA extraction using 16S rDNA gene sequencing via NGS technique and compared with bacteria present in non-contaminated soil as control samples. Furthermore, quantitative variations of bacterial count along with total petroleum hydrocarbons (TPH) removal was performed in oily (case) samples to investigate the relation between TPH removal and changes in bacterial density. The TPH values were determined with gas chromatography equipped with a flame ionization detector (GC-FID). RESULTS The dominant identified bacteria in oily soil were as follows: Halomonas, Moraxellaceae, Thalassobacillus, Zhihengliuella and Enterobacteriaceae which varied significantly from those identified in control soil. The bacterial diversity was higher in contaminated soil and a TPH removal of 50.9% was observed over a period of six months monitoring. CONCLUSION Indigenous bacteria in oil-contaminated soils of an oilfield in south west of Iran were found to be able to degrade Total Petroleum Hydrocarbons. Our results showed that bioremediation of oil-contaminated soils can be implemented without need to amplification of heterogeneous bacteria. Considering sandy loam texture of soil samples, the identified strains of bacteria could be introduced as sufficient consortium for biodegradation of this soils with similar texture.
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Affiliation(s)
- Yalda Basim
- Environmental Technologies Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
| | - Ghasemali Mohebali
- Microbiology and Biotechnology Research Group, Research Institute of Petroleum Industry, Tehran, Iran
| | - Sahand Jorfi
- Environmental Technologies Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
| | - Ramin Nabizadeh
- Department of Environmental Health Engineering, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran
| | | | - Ata Ghadiri
- Department of Immunology, School of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
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18
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Sattar S, Hussain R, Shah SM, Bibi S, Ahmad SR, Shahzad A, Zamir A, Rauf Z, Noshad A, Ahmad L. Composition, impacts, and removal of liquid petroleum waste through bioremediation as an alternative clean-up technology: A review. Heliyon 2022; 8:e11101. [PMID: 36281410 PMCID: PMC9586903 DOI: 10.1016/j.heliyon.2022.e11101] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Revised: 06/12/2022] [Accepted: 10/11/2022] [Indexed: 11/06/2022] Open
Abstract
Exposure to hazardous wastes, especially petroleum wastes hydrocarbon (PWHCs), can damage human health and biological diversity. A huge amount of petroleum waste along with persistent organic pollutants is being generated during exploration and processing of crude oil. The dumping of petroleum waste hydrocarbons in an open pit contaminates the soil which can cause severe threats to human health and agro-geo-environmental ecosystem. The current study aimed to evaluate the mode of occurrence, composition, environmental, and health impacts of petroleum waste by using recent literature. The extracted results show that oil emulsion contains 48% oil, suspension 23%, settled emulsion 42%, and sludge emulsion 36%. The study discusses the possible biological techniques for rehabilitation of petroleum waste-contaminated areas. Several physical and chemical techniques are available for remediation of petroleum waste, but they are either costly or environmentally not feasible. Whereas, biological remediation namely, Bioremediation (Biostimulation and Bioaugmentation), Phytoremediation (Phytodegradation, Rhizoremediation, Phytovolatilization, and Rhizo-filtration) is a cheap and environmentally friendly way to remove petroleum waste hydrocarbons from contaminated soil and water. Some important enzymes (i.e., peroxidase, nitrilase, nitroreductase, phosphatase) and plant species i.e., Acacia and Chloris species are prominent methods to remediate the PWHCs. The knowledge assembled in this review is expected to create new doors for researchers to develop more efficient techniques to control the harmful impacts of PWHCs on the environment and health.
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Affiliation(s)
- Shehla Sattar
- Department of Environmental Sciences, University of Swabi, KP 23561, Pakistan,National Centre of Excellence in Geology, University of Peshawar, KP, Pakistan
| | - Rahib Hussain
- National Centre of Excellence in Geology, University of Peshawar, KP, Pakistan,College of Earth and Environmental Sciences, University of the Punjab, 54590, Pakistan,Corresponding author.
| | | | - Salma Bibi
- Department of Environmental Sciences, University of Swabi, KP 23561, Pakistan
| | - Sajid Rashid Ahmad
- College of Earth and Environmental Sciences, University of the Punjab, 54590, Pakistan
| | - Asim Shahzad
- Department of Botany, Mohi-Ud-Din Islamic University, AJ&K, Pakistan
| | - Ahmad Zamir
- Pakistan Forest Institute, Peshawar, KP, Pakistan
| | - Zahid Rauf
- Department of Geology, University of Swabi, KP 23561, Pakistan
| | - Asma Noshad
- Department of Agriculture, Bacha Khan University, KP, Pakistan
| | - Laeiq Ahmad
- Department of Geology, University of Swabi, KP 23561, Pakistan
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19
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Zhang Y, Sun X, Qian C, Li L, Shang X, Xiao X, Gao Y. Impact of Petroleum Contamination on the Structure of Saline Soil Bacterial Communities. Curr Microbiol 2022; 79:351. [PMID: 36209271 DOI: 10.1007/s00284-022-03057-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2021] [Accepted: 09/26/2022] [Indexed: 11/29/2022]
Abstract
Petroleum contamination may lead to variations in soil microbial community structure and activities. The bioremediation of petroleum-contaminated soil typically depends on the characteristics and activities of oil-degrading microorganisms, which can be introduced or be part of the native soil microbiota. Thus, analyzing the structure of the microbial community and internal relationships in the bioremediation process is critical. Our study characterized the physical and chemical properties, microbial community structure, and microbial diversity of surface soil collected near an oilfield. The total carbon (TC), total organic carbon (TOC), and microbial diversity in oil-contaminated soil was found higher than in uncontaminated samples. Proteobacteria abundance was inhibited with oil pollution, while Actinomycetes abundance was enhanced. Some indigenous hydrocarbon-degrading bactera were enriched by oil pollution, such as Bacillus, Actinomarinales norank, Balneolaceae uncultured, Marinobacter, and Pseudomonas. Furthermore, Rokubacteria, Nitrospirae, and Entotheonellaeota were significant differences in the contaminated group. There were 16 genera with significant differences in the polluted group, such as Woeseia, Pelagibius, Pontibacillus, IS_44, Aliifodinibius, while Halothiobacillus, Algoriphagus, Novosphingobium, etc. had significant differences in the uncontaminated group. Redundancy analysis demonstrated that the responses of the microorganisms to the evaluated environmental factors were different, and TC was the most important driver of microbial community variation. Moreover, TOC was the largest contributor to operational taxonomic unit (OTU) and Chao index variations. Our results provide a theoretical basis for the enhancement of microbial activity in oil-contaminated soil, which might improve bioremediation efficacy.
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Affiliation(s)
- Ying Zhang
- College of Safety and Environmental Engineering, Shandong University of Science and Technology, Qingdao, 266590, Shandong, China
| | - Xiaojie Sun
- College of Safety and Environmental Engineering, Shandong University of Science and Technology, Qingdao, 266590, Shandong, China
| | - Cheng Qian
- Shengli Oilfield, Dongying, Shandong, China
| | - Lin Li
- College of Safety and Environmental Engineering, Shandong University of Science and Technology, Qingdao, 266590, Shandong, China. .,Institute of Yellow River Delta Earth Surface Processes and Ecological Integrity, Shandong University of Science and Technology, Qingdao, 266590, Shandong, China.
| | - Xiufang Shang
- College of Safety and Environmental Engineering, Shandong University of Science and Technology, Qingdao, 266590, Shandong, China
| | - Xinfeng Xiao
- College of Safety and Environmental Engineering, Shandong University of Science and Technology, Qingdao, 266590, Shandong, China
| | - Yu Gao
- College of Safety and Environmental Engineering, Shandong University of Science and Technology, Qingdao, 266590, Shandong, China
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20
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Enriched bacterial community efficiently degrade polycyclic aromatic hydrocarbons in soil ecosystem: Insights from a mesocosms study. Biochem Eng J 2022. [DOI: 10.1016/j.bej.2022.108516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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21
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Alabi OA, Olukunle OF, Ojo OF, Oke JB, Adebo TC. Comparative study of the reproductive toxicity and modulation of enzyme activities by crude oil-contaminated soil before and after bioremediation. CHEMOSPHERE 2022; 299:134352. [PMID: 35341768 DOI: 10.1016/j.chemosphere.2022.134352] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Revised: 03/14/2022] [Accepted: 03/15/2022] [Indexed: 06/14/2023]
Abstract
Contamination of soil with crude oil is a serious ecological problem with potential adverse public health effects. This study assessed the germ cell toxicity of simulated leachates from crude oil-contaminated soil before and after bioremediation using the murine sperm abnormality assay, sperm count, and testes histopathology. The levels of Total Testosterone (TT), Follicle Stimulating Hormone (FSH), and Luteinizing Hormone (LH); and activities of catalase (CAT), alkaline phosphatase (ALP), superoxide dismutase (SOD), aspartate aminotransferase (AST), and alanine aminotransferase (ALT) were determined. The physicochemical, Total Petroleum Hydrocarbon (TPH), and heavy metal analyses of the leachates were also carried out. Male mice were exposed to 50, 25, 10, 5, and 1% (v/v; leachate:distilled water) of the leachate samples for five consecutive days, and were sacrificed after 35 days. The result showed a statistically significant (p < 0.05), concentration-dependent increase in abnormal sperm cells in exposed mice, with aberrations such as folded sperm, amorphous head, wrong tail attachment, distal droplet, no hook, and looped tail. Data further showed a concentration-dependent significant reduction in mean sperm count in the exposed mice. Alterations of seminiferous tubules with different lesions and activities of ALT, AST, ALP, FSH, LH, and TT were also recorded. The high level of selected heavy metals (As, Cr, Cd, Cu, and Pb) and TPH was believed to contribute to the observed reproductive toxicity and modulated enzyme activities in the treated mice. It is therefore concluded that the microbial remediation of the crude oil contaminated soil produced a reduction in the levels of heavy metals and TPH in the soil, reduced reproductive toxicity, and modulation of enzyme activities. However, the induced reproductive toxicity by the bioremediated soil is still significant, hence, further work could be done to employ a consortium of bacteria and extend the period of the bioremediation process to ensure complete removal of the contaminants.
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Affiliation(s)
| | | | - Opeyemi Febisara Ojo
- Department of Biotechnology, Federal University of Technology, Akure, Ondo State, Nigeria
| | - Janet Busayo Oke
- Department of Biotechnology, Federal University of Technology, Akure, Ondo State, Nigeria
| | - Taiwo Cosmas Adebo
- Department of Biology, Federal University of Technology, Akure, Ondo State, Nigeria
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22
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Extraction of Aged Hydrocarbons from Contaminated Soil Using Plant-Oil-in-Water Emulsions Combined with Oil/Water Separation by Reusable Non-Wovens. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12126179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/10/2022]
Abstract
A novel technique for the in situ removal of mineral hydrocarbons from aged brownfields is described. The approach uses emulsions of plant oil (5–10%, rapeseed) in water, which were found to extract 50–85% of mineral hydrocarbons in one leaching step from the non-saturated zone. The emulsion was allowed to travel though the ground and was pumped off from the groundwater level. Approximately 15–50% of the plant oil stayed in the soil. By flushing the area with water afterwards, that amount can be reduced to 10–30%, and in some cases to <5%. This process is only suitable for sand, not for clay. It can be a good preparation for subsequent enzymatic cleavage and microbiological degradation, as part of a multi-stage in situ treatment process. Additionally, plant oil that infiltrated into the saturated zone was used to flush mineral hydrocarbons, which could be pumped off from the groundwater level. It was further tested whether the separation of mineral oil/plant oil and water can be performed by oil-absorbing, reusable non-wovens. Residual concentrations of <2% of water in oil, and 0.3–0.7 mg/L of oil in water were found. In this work, lab trials led to field trials, where more than 500 m3 of water were sent over a pilot installation for oil/water separation using non-wovens. A slightly better separation performance than by oil separators was observed. This process has the potential to be combined with a regular oil separator to allow water purification to a level at which it can be reintroduced into the ground. The technique was tested on a brownfield in Lower Austria, a former refinery site abandoned approx. 80 years ago with a peak hydrocarbon contamination of 40,000 mg/kg of dry soil and free-floating mineral oil on the groundwater level. Since in situ techniques can be more environmentally benign and less costly than traditional remediation approaches, this novel approach holds an interesting potential, which could be proven at a technology readiness level (TRL) of 5.
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23
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Morales-Guzmán G, Ferrera-Cerrato R, Rivera-Cruz MDC, Torres-Bustillos LG, Mendoza-López MR, Esquivel-Cote R, Alarcón A. Phytoremediation of soil contaminated with weathered petroleum hydrocarbons by applying mineral fertilization, an anionic surfactant, or hydrocarbonoclastic bacteria. INTERNATIONAL JOURNAL OF PHYTOREMEDIATION 2022; 25:329-338. [PMID: 35704711 DOI: 10.1080/15226514.2022.2083577] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
This study evaluated the effect of the application of mineral fertilization (F), the anionic surfactant Triton X-100 (TX100), or the inoculation with a hydrocarbooclastic bacterial consortium (BCons) on the growth of Clitoria ternatea during the phytoremediation of a Gleysol contaminated with weathered petroleum hydrocarbons (39,000 mg kg-1 WPH) collected from La Venta, Tabasco (Mexico). The experiment consisted of a completely randomized design with seven treatments and four replications each under greenhouse conditions. The application of F (biostimulation) increased plant growth and biomass production; in contrast, TX100 only favored root biomass (11%) but significantly favored WPH degradation. Bioaugmentation with BCons did not show significant effects on plant growth. Nevertheless, the combination of biostimulation with bioaugmentation (BCons + F, BCons + TX100, and BCons + F+TX100) enhanced plant growth, hydrocarbonoclastic bacteria population, and WPH degradation when compared to treatments with the single application of bioaugmentation (BCons) or biostimulation (F).
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Affiliation(s)
- Gilberto Morales-Guzmán
- Posgrado de Edafología, Colegio de Postgraduados, Montecillo, Texcoco, Estado de México, Mexico
| | - Ronald Ferrera-Cerrato
- Posgrado de Edafología, Colegio de Postgraduados, Montecillo, Texcoco, Estado de México, Mexico
| | - María Del Carmen Rivera-Cruz
- Posgrado en Producción Agroalimentaria en el Trópico, Colegio de Postgraduados, Periférico Carlos A, Cárdenas, Tabasco, Mexico
| | - Luis Gilberto Torres-Bustillos
- Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional (UPIBI-IPN), Ciudad de Mexico, Mexico
| | - Ma Remedios Mendoza-López
- Unidad de Servicios de Apoyo en Resolución Analítica. Universidad Veracruzana, Dr. Luis Castelazo Ayala S/N, Col. Industrial-Animas, Xalapa, Veracruz, Mexico
| | - Rosalba Esquivel-Cote
- Posgrado de Edafología, Colegio de Postgraduados, Montecillo, Texcoco, Estado de México, Mexico
| | - Alejandro Alarcón
- Posgrado de Edafología, Colegio de Postgraduados, Montecillo, Texcoco, Estado de México, Mexico
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24
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Ossai IC, Hamid FS, Hassan A. Micronised keratinous wastes as co-substrates, and source of nutrients and microorganisms for trichoremediation of petroleum hydrocarbon polluted soil. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2022. [DOI: 10.1016/j.bcab.2022.102346] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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25
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Optimization of biomass production by autochthonous Pseudomonas sp . MT1A3 as strategy to apply bioremediation in situ in a chronically hydrocarbon-contaminated soil. 3 Biotech 2022; 12:118. [PMID: 35547010 PMCID: PMC9033923 DOI: 10.1007/s13205-022-03183-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Accepted: 04/03/2022] [Indexed: 11/27/2022] Open
Abstract
These days, petroleum hydrocarbon pollution has become a global problem, because of this, bioremediation is presented as a strategy for cleaning up sites contaminated with organic pollutants, and it has an increasing role in relation to the potential it presents as a non-invasive and cost-effective technology. The aim of this study is to optimize the biomass production of Pseudomonas sp. MT1A3 strain as a soil bioremediation approach for petroleum hydrocarbon polluted environments. Factorial experimental designs were employed to study the effect of several factors of composition medium and incubation conditions on biomass production. Agro-industrial wastes such as peanut oil as carbon source, NaNO3 as nitrogen source and incubation temperature were found to be significant independent variables. These factors were further optimized using Box-Behnken design. Combination of peanut oil 18.69 g/L, NaNO3 2.39 g/L and 26.06 °C incubation temperature was optimum for maximum biomass production of MT1A3 and the model validated in a bioreactor allowed to obtain 9.67 g/L. Based on these results, this autochthonous strain was applied in bioaugmentation as a bioremediation strategy through microcosm designs, reaching 93.52% of total hydrocarbon removal at 60 days. This constitutes a promising alternative for hydrocarbon-contaminated soil. Supplementary Information The online version contains supplementary material available at 10.1007/s13205-022-03183-6.
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26
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Ahmed IB, Nwaichi EO, Ugwoha E, Ugbebor JN, Arokoyu SB. Cost reduction strategies in the remediation of petroleum hydrocarbon contaminated soil. OPEN RESEARCH AFRICA 2022; 5:21. [PMID: 36561538 PMCID: PMC9718438 DOI: 10.12688/openresafrica.13383.1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 04/04/2022] [Indexed: 12/25/2022]
Abstract
Petroleum hydrocarbon spill on land pollutes soil and reduces its ecosystem. Hydrocarbon transport in the soil is aided by several biological, physical, and chemical processes. However, pore characteristics play a major role in the distribution within the soil matrix. Restoring land use after spills necessitates remediation using cost-effective technologies. Several remediation technologies have been demonstrated at different scales, and research is ongoing to improve their performances towards the reduction of treatment costs. The process of removing the contaminants in the soil is through one or a combination of containment, separation, and degradation methods under the influence of biological, physical, chemical, and electrically-dominated processes. Generally, performance improvement is achieved through the introduction of products/materials and/or energy. Nevertheless, the technologies can be categorized based on effectiveness period as short, medium, and long term. The treatment cost of short, medium, and long-term technologies are usually in the range of $39 - 331/t (/tonne), $22 - 131/t, and $8 - 131/t, respectively. However, the total cost depends on other factors such as site location, capital cost, and permitting. This review compiles cost-saving strategies reported for different techniques used in remediating petroleum hydrocarbon polluted soil. We discuss the principles of contaminant removal, performance enhancing methods, and the cost-effectiveness analysis of selected technologies.
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Affiliation(s)
- Ismail B. Ahmed
- Centre for Occupational Health, Safety and Environment, University of Port Harcourt, Choba, Nigeria,National Oil Spill Detection and Response Agency (NOSDRA), Abuja, Nigeria
| | - Eucharia O. Nwaichi
- Department of Biochemistry, University of Port Harcourt, Choba, Nigeria,Exchange & Linkage Programmes Unit, University of Port Harcourt, Choba, Nigeria,
| | - Ejikeme Ugwoha
- Centre for Occupational Health, Safety and Environment, University of Port Harcourt, Choba, Nigeria,Department of Civil & Environmental Engineering, University of Port Harcourt, Choba, Nigeria
| | - John N. Ugbebor
- Centre for Occupational Health, Safety and Environment, University of Port Harcourt, Choba, Nigeria,Department of Civil & Environmental Engineering, University of Port Harcourt, Choba, Nigeria
| | - Samuel B. Arokoyu
- Centre for Research Management and Administration, University of Port Harcourt, Choba, Nigeria,Department of Geography and Environmental Management, University of Port Harcourt, Choba, Nigeria
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27
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Hoang SA, Lamb D, Sarkar B, Seshadri B, Kit Yu RM, Anh Tran TK, O'Connor J, Rinklebe J, Kirkham MB, Vo HT, Bolan NS. Phosphorus application enhances alkane hydroxylase gene abundance in the rhizosphere of wild plants grown in petroleum-hydrocarbon-contaminated soil. ENVIRONMENTAL RESEARCH 2022; 204:111924. [PMID: 34487695 DOI: 10.1016/j.envres.2021.111924] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Revised: 06/18/2021] [Accepted: 08/19/2021] [Indexed: 06/13/2023]
Abstract
This study assessed the ability of phosphorus (P) fertilizer to remediate the rhizosphere of three wild plant species (Banksia seminuda, a tree; Chloris truncata, a grass; and Hakea prostrata, a shrub) growing in a soil contaminated with total (aliphatic) petroleum hydrocarbon (TPH). Plant growth, photosynthesis (via chlorophyll fluorescence), soil microbial activity, alkane hydroxylase AlkB (aliphatic hydrocarbon-degrading) gene abundance, and TPH removal were evaluated 120 days after planting. Overall, although TPH served as an additional carbon source for soil microorganisms, the presence of TPH in soil resulted in decreased plant growth and photosynthesis. However, growth, photosynthesis, microbial activities, and AlkB gene abundance were enhanced by the application of P fertilizer, thereby increasing TPH removal rates, although the extent and optimum P dosage varied among the plant species. The highest TPH removal (64.66%) was observed in soil planted with the Poaceae species, C. truncata, and amended with 100 mg P kg-1 soil, while H. prostrata showed higher TPH removal compared to the plant belonging to the same Proteaceae family, B. seminuda. The presence of plants resulted in higher AlkB gene abundance and TPH removal relative to the unplanted control. The removal of TPH was associated directly with AlkB gene abundance (R2 > 0.9, p < 0.001), which was affected by plant identity and P levels. The results indicated that an integrated approach involving wild plant species and optimum P amendment, which was determined through experimentation using different plant species, was an efficient way to remediate soil contaminated with TPH.
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Affiliation(s)
- Son A Hoang
- Global Centre for Environmental Remediation, College of Engineering, Science and Environment, The University of Newcastle, Callaghan, NSW, 2308, Australia; Global Innovative Centre for Advanced Nanomaterials (GICAN), College of Engineering, Science and Environment, University of Newcastle, Callaghan, NSW, 2308, Australia; Division of Urban Infrastructural Engineering, Mientrung University of Civil Engineering, Phu Yen, 56000, Viet Nam
| | - Dane Lamb
- Chemical and Environmental Engineering, School of Engineering, RMIT University, Melbourne, Victoria, 3000, Australia
| | - Binoy Sarkar
- Lancaster Environment Centre, Lancaster University, Lancaster, LA1 4YQ, United Kingdom
| | - Balaji Seshadri
- Global Centre for Environmental Remediation, College of Engineering, Science and Environment, The University of Newcastle, Callaghan, NSW, 2308, Australia
| | - Richard Man Kit Yu
- School of Environmental and Life Sciences, The University of Newcastle, Callaghan, NSW, 2308, Australia
| | - Thi Kim Anh Tran
- Global Innovative Centre for Advanced Nanomaterials (GICAN), College of Engineering, Science and Environment, University of Newcastle, Callaghan, NSW, 2308, Australia
| | - James O'Connor
- Global Centre for Environmental Remediation, College of Engineering, Science and Environment, The University of Newcastle, Callaghan, NSW, 2308, Australia
| | - Jörg Rinklebe
- University of Wuppertal, School of Architecture and Civil Engineering, Institute of Foundation Engineering, Water- and Waste Management, Laboratory of Soil- and Groundwater-Management, Pauluskirchstraße 7, 42285, Wuppertal, Germany; Department of Environment, Energy and Geoinformatics, Sejong University, Seoul, Republic of Korea
| | - M B Kirkham
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - Huy Thanh Vo
- Division of Urban Infrastructural Engineering, Mientrung University of Civil Engineering, Phu Yen, 56000, Viet Nam
| | - Nanthi S Bolan
- Global Innovative Centre for Advanced Nanomaterials (GICAN), College of Engineering, Science and Environment, University of Newcastle, Callaghan, NSW, 2308, Australia; School of Agriculture and Environment, The University of Western Australia, Perth, WA, 6001, Australia; The UWA Institute of Agriculture, The University of Western Australia, Perth, WA, 6001, Australia.
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28
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Zhang L, Guan Y. Microbial investigations of new hydrogel-biochar composites as soil amendments for simultaneous nitrogen-use improvement and heavy metal immobilization. JOURNAL OF HAZARDOUS MATERIALS 2022; 424:127154. [PMID: 34600389 DOI: 10.1016/j.jhazmat.2021.127154] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Revised: 08/08/2021] [Accepted: 09/03/2021] [Indexed: 06/13/2023]
Abstract
Agricultural sustainability is challenging because of increasingly serious and co-existing issues, e.g., poor nitrogen-fertilizer use and heavy metal pollution. Herein, we introduced a new poly(acrylic acid)-grafted chitosan and biochar composite (PAA/CTS/BC) for soil amendment, and provided a first microbial insight into how PAA/CTS/BC amendment simultaneously improved nitrogen cycling and immobilized heavy metals. Our results suggest that the PAA/CTS/BC amendment significantly promoted soil ammonium retention, and reduced nitrate accumulation, nitrous oxide emission and ammonia volatilization during the rice cultivation. The availability of various heavy metals (Fe, Mn, Cu, Zn, Ni, Pb, Cr, and As) markedly decreased in the PAA/CTS/BC amended soil, thereby reducing their accumulation in rice root. The PAA/CTS/BC amendment significantly altered the structure and function of soil microbial communities. Importantly, the co-occurrence networks of microbial communities became more complex and function-specific after PAA/CTS/BC addition. For example, the keystone species related to organic matter degradation, denitrification, and plant resistance to pathogen or stresses were enriched within the network. In addition to direct adsorption, the effects of PAA/CTS/BC on shaping microbial communities played dominant roles in the soil amendment. Our findings provide a promising strategy of simultaneous nitrogen-use improvement and heavy metal immobilization for achieving crop production improvement, pollution control, and climate change mitigation.
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Affiliation(s)
- Lixun Zhang
- Guangdong Provincial Engineering Technology Research Center for Urban Water Cycle and Water Environment Safety, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen 518055, PR China; Department of Civil and Environmental Engineering, University of California, Irvine, CA 92612, United States
| | - Yuntao Guan
- Guangdong Provincial Engineering Technology Research Center for Urban Water Cycle and Water Environment Safety, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen 518055, PR China.
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29
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Kim JW, Hong YK, Kim HS, Oh EJ, Park YH, Kim SC. Metagenomic Analysis for Evaluating Change in Bacterial Diversity in TPH-Contaminated Soil after Soil Remediation. TOXICS 2021; 9:toxics9120319. [PMID: 34941754 PMCID: PMC8708857 DOI: 10.3390/toxics9120319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Revised: 11/16/2021] [Accepted: 11/17/2021] [Indexed: 11/16/2022]
Abstract
Soil washing and landfarming processes are widely used to remediate total petroleum hydrocarbon (TPH)-contaminated soil, but the impact of these processes on soil bacteria is not well understood. Four different states of soil (uncontaminated soil (control), TPH-contaminated soil (CS), after soil washing (SW), and landfarming (LF)) were collected from a soil remediation facility to investigate the impact of TPH and soil remediation processes on soil bacterial populations by metagenomic analysis. Results showed that TPH contamination reduced the operational taxonomic unit (OTU) number and alpha diversity of soil bacteria. Compared to SW and LF remediation techniques, LF increased more bacterial richness and diversity than SW, indicating that LF is a more effective technique for TPH remediation in terms of microbial recovery. Among different bacterial species, Proteobacteria were the most abundant in all soil groups followed by Actinobacteria, Acidobacteria, and Firmicutes. For each soil group, the distribution pattern of the Proteobacteria class was different. The most abundant classed were Alphaproteobacteria (16.56%) in uncontaminated soils, Deltaproteobacteria (34%) in TPH-contaminated soils, Betaproteobacteria (24%) in soil washing, and Gammaproteobacteria (24%) in landfarming, respectively. TPH-degrading bacteria were detected from soil washing (23%) and TPH-contaminated soils (21%) and decreased to 12% in landfarming soil. These results suggest that soil pollution can change the diversity of microbial groups and different remediation techniques have varied effective ranges for recovering bacterial communities and diversity. In conclusion, the landfarming process of TPH remediation is more advantageous than soil washing from the perspective of bacterial ecology.
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Affiliation(s)
- Jin-Wook Kim
- Department of Bio-Environmental Chemistry, Chungnam National University, Daejeon 34134, Korea; (J.-W.K.); (Y.-K.H.)
| | - Young-Kyu Hong
- Department of Bio-Environmental Chemistry, Chungnam National University, Daejeon 34134, Korea; (J.-W.K.); (Y.-K.H.)
| | - Hyuck-Soo Kim
- Department of Biological Environment, Kangwon National University, Chuncheon 24341, Korea;
| | - Eun-Ji Oh
- Korea Environment Institute, Sejong 30147, Korea;
| | - Yong-Ha Park
- Korea Environment Institute, Sejong 30147, Korea;
- Correspondence: (Y.-H.P.); (S.-C.K.)
| | - Sung-Chul Kim
- Department of Bio-Environmental Chemistry, Chungnam National University, Daejeon 34134, Korea; (J.-W.K.); (Y.-K.H.)
- Correspondence: (Y.-H.P.); (S.-C.K.)
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30
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Factors Influencing the Bacterial Bioremediation of Hydrocarbon Contaminants in the Soil: Mechanisms and Impacts. J CHEM-NY 2021. [DOI: 10.1155/2021/9823362] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
The discharge of hydrocarbons and their derivatives to environments due to human and/or natural activities cause environmental pollution (soil, water, and air) and affect the natural functioning of an ecosystem. To minimize or eradicate environmental pollution by hydrocarbon contaminants, studies showed strategies including physical, chemical, and biological approaches. Among those strategies, the use of biological techniques (especially bacterial biodegradation) is critically important to remove hydrocarbon contaminants. The current review discusses the insights of major factors that enhance or hinder the bacterial bioremediation of hydrocarbon contaminants (aliphatic, aromatic, and polyaromatic hydrocarbons) in the soil. The key factors limiting the overall hydrocarbon biodegradation are generally categorized as biotic factors and abiotic factors. Among various environmental factors, temperature range from 30 to 40°C, pH range from 5 to 8, moisture availability range from 30 to 90%, carbon/nitrogen/phosphorous (C/N/P; 100:20:1) ratio, and 10–40% of oxygen for aerobic degradation are the key factors that show positive correlation for greatest hydrocarbon biodegradation rate by altering the activities of the microbial and degradative enzymes in soil. In addition, the formation of biofilm and production of biosurfactants in hydrocarbon-polluted soil environments increase microbial adaptation to low bioavailability of hydrophobic compounds, and genes that encode for hydrocarbon degradative enzymes are critical for the potential of microbes to bioremediate soils contaminated with hydrocarbon pollutants. Therefore, this review works on the identification of factors for effective hydrocarbon biodegradation, understanding, and optimization of those factors that are essential and critical.
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31
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Bodor A, Bounedjoum N, Feigl G, Duzs Á, Laczi K, Szilágyi Á, Rákhely G, Perei K. Exploitation of extracellular organic matter from Micrococcus luteus to enhance ex situ bioremediation of soils polluted with used lubricants. JOURNAL OF HAZARDOUS MATERIALS 2021; 417:125996. [PMID: 33992922 DOI: 10.1016/j.jhazmat.2021.125996] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 04/22/2021] [Accepted: 04/23/2021] [Indexed: 06/12/2023]
Abstract
Chronic pollution by used lubricant oils (ULOs) poses a serious challenge to the environment. Under stress conditions, microorganisms, including potential degraders, can enter a viable but non-culturable (VBNC) state, complicating the bioremediation of ULO-polluted areas. Resuscitation-promoting factors (Rpfs) can reverse this transition and/or enhance the biodegradation performance of both native and augmented strains. Here, Rpf-containing extracellular organic matter (EOM) from Micrococcus luteus was used to enhance the ex situ ULO removal in biostimulated and bioaugmented (with Rhodococcus qingshengii KAG C, R. erythropolis PR4) soils. ULO bioconversion, microbial activity, and CFUs were significantly higher in EOM-treated soils compared to corresponding control soils. After 60 days, the initial ULO concentration (52,500 mg kg-1) was reduced by 37% and 45% with EOM-supplemented biostimulation and bioaugmentation, respectively. Based on high-throughput 16S rRNA analysis, the enhancement was attributable both to the reactivation of EOM-responsive hydrocarbonoclastic bacterial genera (e.g., Pseudomonas, Comamonas, Stenotrophomonas, Gordonia) and to the long-term positive effect of EOM on the degradative efficacy of the introduced rhodococci. Ecotoxicological responses revealed that reduced ULO concentration did not correlate with decreased soil toxicity. Our findings provide an insight into the applicability of EOM in bioremediation and its effects on the soil microbial activity and community composition.
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Affiliation(s)
- Attila Bodor
- Department of Biotechnology, University of Szeged, Szeged, Hungary; Institute of Biophysics, Biological Research Centre, Eötvös Loránd Research Network, Szeged, Hungary
| | - Naila Bounedjoum
- Department of Biotechnology, University of Szeged, Szeged, Hungary
| | - Gábor Feigl
- Department of Plant Biology, University of Szeged, Szeged, Hungary
| | - Ágnes Duzs
- Department of Biotechnology, University of Szeged, Szeged, Hungary; Institute of Biophysics, Biological Research Centre, Eötvös Loránd Research Network, Szeged, Hungary
| | - Krisztián Laczi
- Department of Biotechnology, University of Szeged, Szeged, Hungary; Institute of Plant Biology, Biological Research Centre, Eötvös Loránd Research Network, Szeged, Hungary
| | - Árpád Szilágyi
- Department of Biotechnology, University of Szeged, Szeged, Hungary
| | - Gábor Rákhely
- Department of Biotechnology, University of Szeged, Szeged, Hungary; Institute of Biophysics, Biological Research Centre, Eötvös Loránd Research Network, Szeged, Hungary.
| | - Katalin Perei
- Department of Biotechnology, University of Szeged, Szeged, Hungary
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Design of a Microbial Remediation Inoculation Program for Petroleum Hydrocarbon Contaminated Sites Based on Degradation Pathways. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:ijerph18168794. [PMID: 34444543 PMCID: PMC8395025 DOI: 10.3390/ijerph18168794] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 08/12/2021] [Accepted: 08/18/2021] [Indexed: 11/24/2022]
Abstract
This paper analyzed the degradation pathways of petroleum hydrocarbon degradation bacteria, screened the main degradation pathways, and found the petroleum hydrocarbon degradation enzymes corresponding to each step of the degradation pathway. Through the Copeland method, the best inoculation program of petroleum hydrocarbon degradation bacteria in a polluted site was selected as follows: single oxygenation path was dominated by Streptomyces avermitilis, hydroxylation path was dominated by Methylosinus trichosporium OB3b, secondary oxygenation path was dominated by Pseudomonas aeruginosa, secondary hydroxylation path was dominated by Methylococcus capsulatus, double oxygenation path was dominated by Acinetobacter baylyi ADP1, hydrolysis path was dominated by Rhodococcus erythropolis, and CoA path was dominated by Geobacter metallireducens GS-15 to repair petroleum hydrocarbon contaminated sites. The Copeland method score for this solution is 22, which is the highest among the 375 solutions designed in this paper, indicating that it has the best degradation effect. Meanwhile, we verified its effect by the Cdocker method, and the Cdocker energy of this solution is −285.811 kcal/mol, which has the highest absolute value. Among the inoculation programs of the top 13 petroleum hydrocarbon degradation bacteria, the effect of the best inoculation program of petroleum hydrocarbon degradation bacteria was 18% higher than that of the 13th group, verifying that this solution has the best overall degradation effect. The inoculation program of petroleum hydrocarbon degradation bacteria designed in this paper considered the main pathways of petroleum hydrocarbon pollutant degradation, especially highlighting the degradability of petroleum hydrocarbon intermediate degradation products, and enriching the theoretical program of microbial remediation of petroleum hydrocarbon contaminated sites.
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Saeed M, Ilyas N, Arshad M, Sheeraz M, Ahmed I, Bhattacharya A. Development of a plant microbiome bioremediation system for crude oil contamination. JOURNAL OF ENVIRONMENTAL CHEMICAL ENGINEERING 2021; 9:105401. [DOI: 10.1016/j.jece.2021.105401] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2024]
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Jiao S, Zhang B, Zhang G, Chen W, Wei G. Stochastic community assembly decreases soil fungal richness in arid ecosystems. Mol Ecol 2021; 30:4338-4348. [PMID: 34185360 DOI: 10.1111/mec.16047] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Revised: 06/18/2021] [Accepted: 06/24/2021] [Indexed: 01/08/2023]
Abstract
Uncovering the linkages between community assembly and species diversity is a fundamental issue in microbial ecology. In this study, a large-scale (transect intervals of 1257.6 km) cross-biome soil survey was conducted, which ranged over agricultural fields, forests, wetlands, grasslands and desert, in the arid regions of northwest China. The aim was to investigate the biogeographic distribution, community assembly and species co-occurrence of soil fungi. The fungal communities in agricultural soils exhibited a steeper distance-decay slope and wider niche breadths, and were more strongly affected by stochastic assembly processes, than fungi in other natural habitats. A strong relationship was revealed between soil fungal richness and community assembly in arid ecosystems, with the influence of stochastic assembly processes decreasing with increasing fungal richness. Moreover, aridity was the most important environmental factor influencing fungal richness, β-diversity and species co-occurrence patterns. Specifically, the predicted increase in arid conditions will probably reduce fungal richness and network complexity. These findings represent a considerable advance in linking fungal richness to mechanisms underlying the biogeographic patterns and assembly processes of fungal communities in arid ecosystems. These results can thus be used to forecast species co-occurrence and diversities pattern of soil fungi under climate aridity and land-use change scenarios.
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Affiliation(s)
- Shuo Jiao
- State Key Laboratory of Crop Stress Biology in Arid Areas, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Baogang Zhang
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, China
| | - Guozhuang Zhang
- Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
| | - Weimin Chen
- State Key Laboratory of Crop Stress Biology in Arid Areas, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Gehong Wei
- State Key Laboratory of Crop Stress Biology in Arid Areas, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, China
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Korshunova TY, Bakaeva MD, Kuzina EV, Rafikova GF, Chetverikov SP, Chetverikova DV, Loginov ON. Role of Bacteria of the Genus Pseudomonas in the Sustainable Development of Agricultural Systems and Environmental Protection (Review). APPL BIOCHEM MICRO+ 2021. [DOI: 10.1134/s000368382103008x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Abbas SZ, Rafatullah M. Recent advances in soil microbial fuel cells for soil contaminants remediation. CHEMOSPHERE 2021; 272:129691. [PMID: 33573807 DOI: 10.1016/j.chemosphere.2021.129691] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2020] [Revised: 01/12/2021] [Accepted: 01/17/2021] [Indexed: 06/12/2023]
Abstract
The cost-effective and eco-friendly approaches are needed for decontamination of polluted soils. The bio-electrochemical system, especially microbial fuel cells (MFCs) offer great promise as a technology for remediation of soil, sediment, sludge and wastewater. Recently, soil MFCs (SMFCs) have been attracting increasing amounts of interest in environmental remediation, since they are capable of providing a clean and inexhaustible source of electron donors or acceptors and can be easily controlled by adjusting the electrochemical parameters. In this review, we comprehensively covered the principle of SMFCs including the mechanisms of electron releasing and electron transportation, summarized the applications for soil contaminants remediation by SMFCs with highlights on organic contaminants degradation and heavy metal ions removal. In addition, the main factors that affected the performance of SMFCs were discussed in details which would be helpful for performance optimization of SMFCs as well as the efficiency improvement for soil remediation. Moreover, the key issues need to be addressed and future perspectives are presented.
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Affiliation(s)
- Syed Zaghum Abbas
- Biofuels Institute, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, Jiangsu Province, China.
| | - Mohd Rafatullah
- Division of Environmental Technology, School of Industrial Technology, Universiti Sains Malaysia, 11800, Penang, Malaysia
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Effect of biostimulation and bioaugmentation on hydrocarbon degradation and detoxification of diesel-contaminated soil: a microcosm study. J Microbiol 2021; 59:634-643. [PMID: 33990911 DOI: 10.1007/s12275-021-0395-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 03/24/2021] [Accepted: 04/02/2021] [Indexed: 10/21/2022]
Abstract
Soil contamination with diesel oil is quite common during processes of transport and storage. Bioremediation is considered a safe, economical, and environmentally friendly approach for contaminated soil treatment. In this context, studies using hydrocarbon bioremediation have focused on total petroleum hydrocarbon (TPH) analysis to assess process effectiveness, while ecotoxicity has been neglected. Thus, this study aimed to select a microbial consortium capable of detoxifying diesel oil and apply this consortium to the bioremediation of soil contaminated with this environmental pollutant through different bioremediation approaches. Gas chromatography (GC-FID) was used to analyze diesel oil degradation, while ecotoxicological bioassays with the bioindicators Artemia sp., Aliivibrio fischeri (Microtox), and Cucumis sativus were used to assess detoxification. After 90 days of bioremediation, we found that the biostimulation and biostimulation/bioaugmentation approaches showed higher rates of diesel oil degradation in relation to natural attenuation (41.9 and 26.7%, respectively). Phytotoxicity increased in the biostimulation and biostimulation/bioaugmentation treatments during the degradation process, whereas in the Microtox test, the toxicity was the same in these treatments as that in the natural attenuation treatment. In both the phytotoxicity and Microtox tests, bioaugmentation treatment showed lower toxicity. However, compared with natural attenuation, this approach did not show satisfactory hydrocarbon degradation. Based on the microcosm experiments results, we conclude that a broader analysis of the success of bioremediation requires the performance of toxicity bioassays.
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Zhen L, Hu T, Lv R, Wu Y, Chang F, Jia F, Gu J. Succession of microbial communities and synergetic effects during bioremediation of petroleum hydrocarbon-contaminated soil enhanced by chemical oxidation. JOURNAL OF HAZARDOUS MATERIALS 2021; 410:124869. [PMID: 33422735 DOI: 10.1016/j.jhazmat.2020.124869] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Revised: 11/19/2020] [Accepted: 12/12/2020] [Indexed: 06/12/2023]
Abstract
Biotechnologies integrated with chemical techniques are promising in treating the soils contaminated by petroleum hydrocarbons. Experiments by applying the degrading consortium and the modified Fenton (MF) with the chelator sodium citrate simultaneously were carried out to investigate the effects of the MF reagents on the degradation of total petroleum hydrocarbons (TPHs), changes in enzyme activities and the succession of microbial communities at the 0, 20, 100 and 500 mmol/kg hydrogen peroxide concentration levels. The ratio between hydrogen peroxide, ferrous sulfate and sodium citrate in the MF reagents was 100:1:1. The results indicated that the degradation of TPHs conformed to first-order kinetics and MF treatments increased the total removal rates of TPHs (4.73-24.26%) and activated dehydrogenase and polyphenol oxidase activities. A shift in microbial communities from Proteobacteria to Bacteroidetes was observed during the enhanced bioremediation, and the predominant genus shifted from Pseudomonas with an average relative abundance (ARAs) of 76.61% at the beginning to Sphingobacterium with ARAs of 52.06% at the later stage. The MF reagents at the proper level could simplify the relationship among the community populations, alleviate their competition and strengthen their associations, which would optimize the removal efficiency.
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Affiliation(s)
- Lisha Zhen
- Shaanxi Province Institute of Microbiology, Xi'an, Shaanxi 710043, China
| | - Ting Hu
- College of Natural Resources and Environment, Northwest A & Forestry University, Yangling, Shaanxi 712100, China
| | - Rui Lv
- Shaanxi Province Institute of Microbiology, Xi'an, Shaanxi 710043, China
| | - Yucheng Wu
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Fan Chang
- Shaanxi Province Institute of Microbiology, Xi'an, Shaanxi 710043, China
| | - Feng'an Jia
- Shaanxi Province Institute of Microbiology, Xi'an, Shaanxi 710043, China
| | - Jie Gu
- College of Natural Resources and Environment, Northwest A & Forestry University, Yangling, Shaanxi 712100, China.
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Wu T, Li XB, Xu J, Liu LX, Ren LL, Dong B, Li W, Xie WJ, Yao ZG, Chen QF, Xia JB. Diversity and functional characteristics of endophytic bacteria from two grass species growing on an oil-contaminated site in the Yellow River Delta, China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 767:144340. [PMID: 33429273 DOI: 10.1016/j.scitotenv.2020.144340] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Revised: 12/01/2020] [Accepted: 12/02/2020] [Indexed: 06/12/2023]
Abstract
Phragmites australis and Chloris virgata are native, dominant, salt-tolerant grass species that grow in the Yellow River Delta, China, and have potential applications in the phytoremediation of petroleum-polluted saline soil. The characteristics of endophytic bacterial communities of Phragmites australis and Chloris virgata and their functions in hydrocarbon degradation and plant growth promotion have been studied using both high-throughput sequencing and conventional microbial techniques. Through 16S rRNA gene amplicon sequencing, we found five bacterial phyla that were dominant among the endophytic bacterial communities of the two grass species, including Proteobacteria, Actinobacteria, Firmicutes, Bacteroidetes, and Tenericutes. The phylum Proteobacteria was common among the endophytic bacterial communities of the two grass species. The diversity in the endophytic bacterial community of Chloris virgata was generally higher than that in the community of Phragmites australis. Thirty-eight hydrocarbon-degrading endophytic bacteria were isolated from the two grasses via culturing techniques. Based on phylogenetic analyses, the bacterial isolates were classified into the phyla Proteobacteria, Firmicutes, and Actinobacteria. The majority of strains belonged to the genera Bacillus and Pseudomonas. More than 70% of the isolates of hydrocarbon-degrading endophytes exhibited the ability to stimulate plant growth. These isolates mainly belonged to Bacillus sp., Pseudomonas sp., Beijerinckia sp., Serratia sp., Acinetobacter sp., Microbacterium sp., and Rhizobium sp. Altogether, the present study revealed that Phragmites australis and Chloris virgata growing on petroleum-polluted saline soil in the Yellow River Delta harbor several diverse species of endophytic bacteria and serve as novel sources of beneficial bacteria and hydrocarbon degradation.
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Affiliation(s)
- Tao Wu
- Shandong Provincial Engineering and Technology Research Center for Wild Plant Resources Development and Application of Yellow River Delta, College of Biological and Environmental Engineering, Binzhou University, Binzhou 256603, China; Shandong Key Laboratory of Eco-Environmental Science for the Yellow River Delta, Binzhou University, Binzhou 256603, China
| | - Xiao-Bin Li
- Zhuhai Precision Medical Center, Zhuhai People's Hospital (Zhuhai hospital affiliated with Jinan University), Zhuhai 519000, China
| | - Jie Xu
- Department of Bioengineering, Binzhou Vocational College, Binzhou 256600, China
| | - Long-Xiang Liu
- Shandong Provincial Engineering and Technology Research Center for Wild Plant Resources Development and Application of Yellow River Delta, College of Biological and Environmental Engineering, Binzhou University, Binzhou 256603, China
| | - Li-Li Ren
- Shandong Provincial Engineering and Technology Research Center for Wild Plant Resources Development and Application of Yellow River Delta, College of Biological and Environmental Engineering, Binzhou University, Binzhou 256603, China
| | - Bin Dong
- Shandong Provincial Engineering and Technology Research Center for Wild Plant Resources Development and Application of Yellow River Delta, College of Biological and Environmental Engineering, Binzhou University, Binzhou 256603, China
| | - Wang Li
- Shandong Provincial Engineering and Technology Research Center for Wild Plant Resources Development and Application of Yellow River Delta, College of Biological and Environmental Engineering, Binzhou University, Binzhou 256603, China
| | - Wen-Jun Xie
- Shandong Provincial Engineering and Technology Research Center for Wild Plant Resources Development and Application of Yellow River Delta, College of Biological and Environmental Engineering, Binzhou University, Binzhou 256603, China; Shandong Key Laboratory of Eco-Environmental Science for the Yellow River Delta, Binzhou University, Binzhou 256603, China
| | - Zhi-Gang Yao
- Shandong Provincial Engineering and Technology Research Center for Wild Plant Resources Development and Application of Yellow River Delta, College of Biological and Environmental Engineering, Binzhou University, Binzhou 256603, China
| | - Qing-Feng Chen
- College of Geography and Environment, Shandong Normal University, Jinan 250014, China.
| | - Jiang-Bao Xia
- Shandong Provincial Engineering and Technology Research Center for Wild Plant Resources Development and Application of Yellow River Delta, College of Biological and Environmental Engineering, Binzhou University, Binzhou 256603, China; Shandong Key Laboratory of Eco-Environmental Science for the Yellow River Delta, Binzhou University, Binzhou 256603, China.
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Kakar A, Liem-Nguyen V, Mahmood Q, Jonsson S. Elevated concentrations of mercury and methylmercury in the Gadani shipbreaking area, Pakistan. MARINE POLLUTION BULLETIN 2021; 165:112048. [PMID: 33631481 DOI: 10.1016/j.marpolbul.2021.112048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2020] [Revised: 01/04/2021] [Accepted: 01/06/2021] [Indexed: 06/12/2023]
Abstract
Gadani shipbreaking area, Pakistan, is the world's third largest shipbreaking unit. However, to date, only a few studies on the environmental impacts of the industry, including mercury (Hg) pollution, have been conducted. To address this, concentrations of total Hg (HgT) and methylmercury (MeHg) were measured in surface sediments collected from the Gadani shipbreaking area as well as a local reference area. The highest concentrations of HgT and MeHg (median ± interquartile range) were detected in samples from the beach at the yard zone (HgT: 270 ± 230 μg kg-1, MeHg: 0.65 ± 0.69 μg kg-1), followed by sediment samples from the inter/sub-tidal zone where ships are dismantled (HgT: 20 ± 5.8 μg kg-1, MeHg: 0.043 ± 0.016 μg kg-1). These concentrations were on average 4-50 and 3-30 times greater than the concentrations of HgT and MeHg, respectively, observed in the reference area. CAPSULE: Elevated concentrations of total and methylated mercury observed in the Gadani Shipbreaking area sediments.
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Affiliation(s)
- Allauddin Kakar
- Department of Environmental Sciences, COMSATS University Islamabad, Abbottabad Campus, 22060, Pakistan; Department of Environmental Science, Stockholm University, SE-106 91, Sweden
| | - Van Liem-Nguyen
- Department of Environmental Science, Stockholm University, SE-106 91, Sweden
| | - Qaisar Mahmood
- Department of Environmental Sciences, COMSATS University Islamabad, Abbottabad Campus, 22060, Pakistan
| | - Sofi Jonsson
- Department of Environmental Science, Stockholm University, SE-106 91, Sweden.
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Medaura MC, Guivernau M, Moreno-Ventas X, Prenafeta-Boldú FX, Viñas M. Bioaugmentation of Native Fungi, an Efficient Strategy for the Bioremediation of an Aged Industrially Polluted Soil With Heavy Hydrocarbons. Front Microbiol 2021; 12:626436. [PMID: 33868189 PMCID: PMC8044458 DOI: 10.3389/fmicb.2021.626436] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Accepted: 03/10/2021] [Indexed: 01/30/2023] Open
Abstract
The concurrence of structurally complex petroleum-associated contaminants at relatively high concentrations, with diverse climatic conditions and textural soil characteristics, hinders conventional bioremediation processes. Recalcitrant compounds such as high molecular weight polycyclic aromatic hydrocarbons (HMW-PAHs) and heavy alkanes commonly remain after standard soil bioremediation at concentrations above regulatory limits. The present study assessed the potential of native fungal bioaugmentation as a strategy to promote the bioremediation of an aged industrially polluted soil enriched with heavy hydrocarbon fractions. Microcosms assays were performed by means of biostimulation and bioaugmentation, by inoculating a defined consortium of six potentially hydrocarbonoclastic fungi belonging to the genera Penicillium, Ulocladium, Aspergillus, and Fusarium, which were isolated previously from the polluted soil. The biodegradation performance of fungal bioaugmentation was compared with soil biostimulation (water and nutrient addition) and with untreated soil as a control. Fungal bioaugmentation resulted in a higher biodegradation of total petroleum hydrocarbons (TPH) and of HMW-PAHs than with biostimulation. TPH (C14-C35) decreased by a 39.90 ± 1.99% in bioaugmented microcosms vs. a 24.17 ± 1.31% in biostimulated microcosms. As for the effect of fungal bioaugmentation on HMW-PAHs, the 5-ringed benzo(a)fluoranthene and benzo(a)pyrene were reduced by a 36% and 46%, respectively, while the 6-ringed benzoperylene decreased by a 28%, after 120 days of treatment. Biostimulated microcosm exhibited a significantly lower reduction of 5- and 6-ringed PAHs (8% and 5% respectively). Higher TPH and HMW-PAHs biodegradation levels in bioaugmented microcosms were also associated to a significant decrease in acute ecotoxicity (EC50) by Vibrio fischeri bioluminiscence inhibition assays. Molecular profiling and counting of viable hydrocarbon-degrading bacteria from soil microcosms revealed that fungal bioaugmentation promoted the growth of autochthonous active hydrocarbon-degrading bacteria. The implementation of such an approach to enhance hydrocarbon biodegradation should be considered as a novel bioremediation strategy for the treatment of the most recalcitrant and highly genotoxic hydrocarbons in aged industrially polluted soils.
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Affiliation(s)
| | - Miriam Guivernau
- GIRO Program, Institute of Agrifood Research and Technology (IRTA), Caldes de Montbui, Barcelona, Spain
| | - X. Moreno-Ventas
- Department of Sciences and Techniques in Water and Environment, University of Cantabria, Santander, Spain
| | | | - Marc Viñas
- GIRO Program, Institute of Agrifood Research and Technology (IRTA), Caldes de Montbui, Barcelona, Spain
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Lee YY, Seo Y, Ha M, Lee J, Yang H, Cho KS. Evaluation of rhizoremediation and methane emission in diesel-contaminated soil cultivated with tall fescue (Festuca arundinacea). ENVIRONMENTAL RESEARCH 2021; 194:110606. [PMID: 33345896 DOI: 10.1016/j.envres.2020.110606] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2020] [Revised: 10/24/2020] [Accepted: 12/06/2020] [Indexed: 06/12/2023]
Abstract
Rhizoremediation, CH4 emission, and bacterial community dynamics were evaluated in diesel-contaminated soil cultivated with tall fescue via a pot experiment. At the beginning of the experiment, total petroleum hydrocarbons (TPHs) removal efficiency was 30.2% in tall fescue-cultivated soil, which was significantly higher than that of unplanted soil (19.4%). However, when compost was added as a soil amendment, TPHs removal efficiency increased to 39.2% in tall fescue-cultivated soil. Interestingly, potential CH4 emissions were more affected by the initial diesel concentration than by compost addition or tall fescue planting. Specifically, the potential CH4 emission was approximately 3.8 times higher in the treatment with the highest initial diesel concentration (T-WC38) than that of the treatment with the lowest initial diesel concentration (T-WC5). Functional gene analysis revealed that TPHs removal had a linear correlation with the alkB/16S gene ratio, whereas potential CH4 emission had a linear correlation with pmoA gene copy numbers. Initial diesel concentrations in soil also affected bacterial community structures and the genera Rhizobium, Halothiobacillus, and Geobacter were found to be positively linked to diesel-contaminated soil rhizoremediation. Therefore, this study provides useful insights into the development of strategies to enhance rhizoremediation efficiency and CH4 emission mitigation in diesel-contaminated soils.
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Affiliation(s)
- Yun-Yeong Lee
- Department of Environmental Science and Engineering, Ewha Womans University, Seoul, 03760, Republic of Korea
| | - Yoonjoo Seo
- Department of Environmental Science and Engineering, Ewha Womans University, Seoul, 03760, Republic of Korea
| | - Minyoung Ha
- Department of Environmental Science and Engineering, Ewha Womans University, Seoul, 03760, Republic of Korea
| | - Jiho Lee
- Department of Environmental Science and Engineering, Ewha Womans University, Seoul, 03760, Republic of Korea
| | - Hyoju Yang
- Department of Environmental Science and Engineering, Ewha Womans University, Seoul, 03760, Republic of Korea
| | - Kyung-Suk Cho
- Department of Environmental Science and Engineering, Ewha Womans University, Seoul, 03760, Republic of Korea.
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Garousin H, Pourbabaee AA, Alikhani HA, Yazdanfar N. A Combinational Strategy Mitigated Old-Aged Petroleum Contaminants: Ineffectiveness of Biostimulation as a Bioremediation Technique. Front Microbiol 2021; 12:642215. [PMID: 33717040 PMCID: PMC7947215 DOI: 10.3389/fmicb.2021.642215] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Accepted: 02/08/2021] [Indexed: 11/13/2022] Open
Abstract
Hydrocarbon contamination emerging from the crude oil industrial-related activities has led to severe environmental issues. Prolonged contamination with the constant infiltration of crude oil into the soil is a severe problem in remediating contaminated soils. Hence, the current study focuses on comparing various bioremediation strategies, thereby isolating native bacteria competent to reduce TPH in both liquid and microcosm environments in an old-aged petroleum hydrocarbon contaminated soil. Assays in the modified 6SW-Vit medium after 7 days of incubation revealed that Bacillus altitudinis strain HRG-1 was highly hydrophobic and had a suitable ability to decrease surface tension (40.98%) and TPH (73.3%). The results of biodegradation in the microcosm proved that among the designated treatments, including bio-stimulated microcosm (SM), bacterialized microcosm (BM), a combined bio-stimulated microcosm and bacterialized microcosm (SB), and natural attenuation (NA), the SB treatment was the most effective in mitigating TPH (38.2%). However, the SM treatment indicated the lowest TPH biodegradation (18%). Pearson correlation coefficient among microcosm biological indicators under investigation revealed that soil basal respiration had the highest correlation with the amount of residual TPH (r = −0.73915, P < 0.0001), followed by the microbial population (r = −0.65218, P < 0.0001), catalase activity (r = 0.48323, P = 0.0028), polyphenol oxidase activity (r = −0.43842, P = 0.0075), and dehydrogenase activity (r = −0.34990, P = 0.0364), respectively. Nevertheless, considering the capability of strain HRG-1 and the higher efficiency of the combined technique, their use is recommended to diminish the concentration of petroleum hydrocarbons in hot and dry contaminated areas.
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Affiliation(s)
- Hamidreza Garousin
- Biology and Biotechnology Lab, Department of Soil Science, University College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran
| | - Ahmad Ali Pourbabaee
- Biology and Biotechnology Lab, Department of Soil Science, University College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran
| | - Hossein Ali Alikhani
- Biology and Biotechnology Lab, Department of Soil Science, University College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran
| | - Najmeh Yazdanfar
- Iranian Institute of R&D in Chemical Industries (IRDCI) (ACECR), Tehran, Iran
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Feng S, Gong L, Zhang Y, Tong Y, Zhang H, Zhu D, Huang X, Yang H. Bioaugmentation potential evaluation of a bacterial consortium composed of isolated Pseudomonas and Rhodococcus for degrading benzene, toluene and styrene in sludge and sewage. BIORESOURCE TECHNOLOGY 2021; 320:124329. [PMID: 33142251 DOI: 10.1016/j.biortech.2020.124329] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Revised: 10/16/2020] [Accepted: 10/23/2020] [Indexed: 06/11/2023]
Abstract
Bioaugmentation was conducted using a bacterial consortium of Pseudomonas putida SW-3 and Rhodococcus ruber SS-4, to test their ability to degrade benzene, toluene, and styrene (BTS). SW-3 and SS-4 were isolated from domestic sludge and sewage samples to establish a synthetic consortium with an optimized ratio of 2:1 to reach a degradation efficiency of 82.5-89.8% of BTS. The bacterial consortium was inoculated with sludge and sewage samples at a ratio of 2:1, resulting in a degradation efficiency of 97.9% and 92.7%, respectively, at a BTS concentration of 1800 mg·L-1. Analysis of bacterial community structure following bioaugmentation indicated an increase in abundance of BTS-degrading bacteria, particularly Acinetobacter and Pseudoxanthomonas in sludge and Pseudomonas in sewage, enhancing the collective BTS degradation ability of the bacterial community. Principal component analysis demonstrated that a more balanced bacterial community structure was established following intervention. This indicated that the selected bacteria are excellent candidates for bioaugmentation.
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Affiliation(s)
- Shoushuai Feng
- Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, 1800 Lihu Road, China
| | - Liangqi Gong
- Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, 1800 Lihu Road, China
| | - Yanke Zhang
- Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, 1800 Lihu Road, China
| | - Yanjun Tong
- Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, 1800 Lihu Road, China
| | - Hailing Zhang
- Department of Biological Engineering, College of Life Science, Yantai University, Shandong 408100, China
| | - Deqiang Zhu
- State Key Laboratory of Biobased Material and Green Papermaking, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250353, China
| | - Xing Huang
- WUXI City Environmental Technology Co., Ltd, Wuxi, China
| | - Hailin Yang
- Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, 1800 Lihu Road, China; Key Laboratory of Carbohydrate Chemistry and Biotechnology (Jiangnan University) Ministry of Education, China.
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45
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Kovaleva EI, Trofimov SY, Zhongqi C. Impact of oil contamination on ecological functions of peat soils from West Siberia of Russia. JOURNAL OF ENVIRONMENTAL QUALITY 2021; 50:49-62. [PMID: 33089507 DOI: 10.1002/jeq2.20171] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Accepted: 10/12/2020] [Indexed: 05/21/2023]
Abstract
For more than a century, the need for energy has exerted high demand on oil production and led to significant negative impacts on soil and water resources. The aim of our work was to assess such impacts on the ecological functions of oil-contaminated soils in West Siberia of Russia. The total petroleum hydrocarbons (PHC) content in contaminated soils varied between 3.7 and 390 g kg-1 . Although peat had the ability to absorb some PHC, excess oil migrated in soil both downward and laterally. Catalase activity, soil respiration activity (basal respiration [BR], microbial biomass carbon [Cmic], and specific respiration activity [qCO2 ]), and Enchytraeus albidus survival and reproduction rates showed significant negative correlations with PHC concentrations, and thus they can be used as guides for establishing acceptable PHC limits in peat soils. Based on the Logit model, the concentration of PHC in peat soil that corresponds to ∼20% reduction on functions (worm reproduction, catalase activity, and basal respiration) is about 40-50 g kg-1 . The concentrations of PHC that will result in 80% functional reductions (i.e., near-complete loss on functional activities) are worm production (177 g kg-1 ), catalase activity (123 g kg-1 ), and basal respiration (311 g kg-1 ). This study provides quantitative understanding of the ecological impact of PHC contamination on peat soils and thus helps to establish science-based guidelines for the protection of ecological functions and services of peatland soils.
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Affiliation(s)
| | | | - Cheng Zhongqi
- Dep. of Earth and Environmental Sciences, Brooklyn College, Brooklyn, NY, 11210, USA
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46
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Soil Microbial Community Profiling and Bacterial Metabolic Activity of Technosols as an Effect of Soil Properties following Land Reclamation: A Case Study from the Abandoned Iron Sulphide and Uranium Mine in Rudki (South-Central Poland). AGRONOMY-BASEL 2020. [DOI: 10.3390/agronomy10111795] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The aims of the study were (1) to recognize the structure of bacteria diversity in Technosols developed from mine spoils containing iron (Fe) sulphides with the use of culture-independent technique, and (2) to determine microbial metabolic activities, in the context of their potential to be an adequate indicators of soil properties being the consequence of land reclamation. The study site was located in the vicinity of the abandoned Fe sulphide and uranium mine in Rudki village (Holy Cross Mts., Poland). Three soil profiles with different chemical properties (pH, content of carbonates, soil salinity, content of total organic carbon and total nitrogen) were studied. Biodiversity was determined with the use of meta-barcoding of 16S rRNA community profiling analysis based on the hypervariable V3-V4 region of 16S rRNA gene (MiSeq, Illumina). The catabolic fingerprinting of soil microbial communities was evaluated with the use of Biolog®EcoPlates™ System. It was evidenced that changes in microbial structure and their metabolic activity were the consequence of a combined effect of both the soil depth and soil chemical properties being the final result of reclamation process. Consequently, microbial indicators (from phyla to genera level) indirectly testifying about success or ineffectiveness of reclamation in technogenic soils were recommended. To our best knowledge, the present study is the first insight into Polish Technosols biodiversity and catabolic activity.
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47
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Wang Y, Du L, Liu H, Long D, Huang M, Wang Y, Huang S, Jin D. Halosulfuron methyl did not have a significant effect on diversity and community of sugarcane rhizosphere microflora. JOURNAL OF HAZARDOUS MATERIALS 2020; 399:123040. [PMID: 32526443 DOI: 10.1016/j.jhazmat.2020.123040] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2020] [Revised: 05/24/2020] [Accepted: 05/24/2020] [Indexed: 06/11/2023]
Abstract
Halosulfuron methyl (HM) is a new, highly active sulfonylurea herbicide that has been widely used for weed control in agricultural production. However, its potential ecological risks remain unknown. In this study, we investigated the impact of different concentrations of HM on bacterial communities in sugarcane rhizospheric soil by using 16S rRNA gene high-throughput sequencing. The half-life of HM for 130 mg/kg, 600 mg/kg, and 1300 mg/kg spraying concentrations were 6.64, 9.19, and 9.87 d, respectively. HM application did not alter the alpha or beta diversity of the soil bacterial community, whereas some microbial populations and the main microbial functional groups were significantly altered by HM exposure. The phylum Cyanobacteria and genus unclassified Chloroflexi group KD4-96 were found to be positively correlated with HM concentration in soils, indicating that they are highly involved in the biodegradation of HM in soils. Relationship analysis between soil properties and microbial communities showed that total nitrogen and total phosphorus concentration were two key factors that significantly influenced microbial community structure. To our best knowledge, this is the first microbial ecotoxicological assessment of HM in agricultural soil.
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Affiliation(s)
- Yanhui Wang
- Guangxi Key Laboratory for Biology of Crop Diseases and Insect Pests, Institute of Plant Protection, Guangxi Academy of Agricultural Sciences, Nanning, 530007, China
| | - Liangwei Du
- College of Chemistry and Chemical Engineering, Guangxi University, Nanning, 530004, China
| | - Huijun Liu
- Beijing Key Laboratory of Detection and Control of Spoilage Organisms and Pesticide Residues in Agricultural Products, Beijing University of Agriculture, Beijing, 102206, China
| | - Di Long
- Institute of Pesticide and Environmental Toxicology, Guangxi University, Nanning, 530007, China
| | - Mengge Huang
- Institute of Pesticide and Environmental Toxicology, Guangxi University, Nanning, 530007, China
| | - Yuting Wang
- Beijing Key Laboratory of Detection and Control of Spoilage Organisms and Pesticide Residues in Agricultural Products, Beijing University of Agriculture, Beijing, 102206, China
| | - Shilin Huang
- Beijing Key Laboratory of Detection and Control of Spoilage Organisms and Pesticide Residues in Agricultural Products, Beijing University of Agriculture, Beijing, 102206, China
| | - Decai Jin
- Key Laboratory of Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085, China.
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48
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Li Q, You P, Hu Q, Leng B, Wang J, Chen J, Wan S, Wang B, Yuan C, Zhou R, Ouyang K. Effects of co-contamination of heavy metals and total petroleum hydrocarbons on soil bacterial community and function network reconstitution. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 204:111083. [PMID: 32791359 DOI: 10.1016/j.ecoenv.2020.111083] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2019] [Revised: 06/07/2020] [Accepted: 07/25/2020] [Indexed: 05/25/2023]
Abstract
Due to the accumulation of heavy metals in soil ecosystems, the response of soil microorganisms to the disturbance of heavy metals were widely studied. However, little was known about the interactions among microorganisms in heavy metals and total petroleum hydrocarbons (TPH) co-contaminated soils. In the present study, the microbiota shifts of 2 different contamination types of heavy metal-TPH polluted soils were investigated. NGS sequencing approach was adopted to illustrate the microbial community structure and to predict community function. Networks were established to reveal the interactions between microbes and environmental pollutants. Results showed that the alpha diversity and OTUs number of soil microbiota were reduced under heavy metals and TPH pollutants. TPH was the major pollutant in HT1 group, in which Proteobacteria phylum increased significantly, including Arenimonas genus, Sphingomonadaceae family and Burkholderiaceae family. Moreover, the function structures based on the KEGG database of HT1 group was enriched in the benzene matter metabolism and bacterial motoricity in microbiota. In contrast, severe Cr-Pb-TPH co-pollutants in HT2 increased the abundance of Firmicutes. In details, the relative abundance of Streptococcus genus and Bacilli class raised sharply. The DNA replication functions in microbiota were enriched under severely contaminated soil as a result of high concentrations of heavy metals and TPH pollutants' damage to bacteria. Furthermore, according to the correlation analysis between microbes and the pollutants, Streptococcus, Neisseria, Aeromonas, Porphyromonas and Acinetobacter were suggested as the bioremediation bacteria for Cr and Pb polluted soils, while Syntrophaceae spp. and Immundisolibacter were suggested as the bioremediation bacteria for TPH polluted soil. The study took a survey on the microbiota shifts of the heavy metals and TPH polluted soils, and the microbe's biomarkers provided new insights for the candidate strains of biodegradation, while further researches are required to verify the biodegradation mechanism of these biomarkers.
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Affiliation(s)
- Qian Li
- Hunan Research Institute for Nonferrous Metals, Changsha, China.
| | - Ping You
- Hunan Research Institute for Nonferrous Metals, Changsha, China
| | - Qi Hu
- NEOMICS Institute, Shenzhen, China
| | | | | | - Jiali Chen
- Hunan Research Institute for Nonferrous Metals, Changsha, China
| | - Si Wan
- Hunan Research Institute for Nonferrous Metals, Changsha, China; Kunming University of Science and Technology, Kunming, China
| | - Bing Wang
- Hunan Research Institute for Nonferrous Metals, Changsha, China; Kunming University of Science and Technology, Kunming, China
| | - Cuiyu Yuan
- Hunan Research Institute for Nonferrous Metals, Changsha, China
| | - Rui Zhou
- Hunan Research Institute for Nonferrous Metals, Changsha, China
| | - Kun Ouyang
- Hunan Research Institute for Nonferrous Metals, Changsha, China.
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49
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Pacwa-Płociniczak M, Biniecka P, Bondarczuk K, Piotrowska-Seget Z. Metagenomic Functional Profiling Reveals Differences in Bacterial Composition and Function During Bioaugmentation of Aged Petroleum-Contaminated Soil. Front Microbiol 2020; 11:2106. [PMID: 32983067 PMCID: PMC7487420 DOI: 10.3389/fmicb.2020.02106] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2020] [Accepted: 08/10/2020] [Indexed: 02/01/2023] Open
Abstract
Our objective was to study the bacterial community changes that determine enhanced removal of petroleum hydrocarbons from soils subjected to bioaugmentation with the hydrocarbon-degrading strains Rhodococcus erythropolis CD 130, CD 167, and their combination. To achieve this, a high-throughput sequencing of the 16S rRNA gene was performed. The changes in the bacterial community composition were most apparent the day after bacterial inoculation. These changes represented an increase in the percentage abundance of Rhodococcus and Pseudomonas genera. Surprisingly, members of the Rhodococcus genus were not present after day 91. At the end of the experiment, the bacterial communities from the CD 130, CD 167, and control soils had a similar structure. Nevertheless, the composition of the bacteria in the CD 130 + CD 167 soil was still distinct from the control. Metagenomic predictions from the 16S rRNA gene sequences showed that the introduction of bacteria had a significant influence on the predicted pathways (metabolism of xenobiotics, lipids, terpenoids, polyketides, and amino acids) on day one. On day 182, differences in the abundance of functional pathways were also detected in the CD 130 and CD 130 + CD 167 soils. Additionally, we observed that on day one, in all bioaugmented soils, the alkH gene was mainly contributed by the Rhodococcus and Mycobacterium genera, whereas in non-treated soil, this gene was contributed only by the Mycobacterium genus. Interestingly, from day 91, the Mycobacterium genus was the main contributor for the tested genes in all studied soils. Our results showed that hydrocarbon depletion from the analyzed soils resulted from the activity of the autochthonous bacteria. However, these changes in the composition and function of the indigenous bacterial community occurred under the influence of the introduced bacteria.
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Affiliation(s)
- Magdalena Pacwa-Płociniczak
- Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Katowice, Poland
| | - Paulina Biniecka
- Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Katowice, Poland
| | - Kinga Bondarczuk
- Centre for Bioinformatics and Data Analysis, Medical University of Bialystok, Białystok, Poland
| | - Zofia Piotrowska-Seget
- Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Katowice, Poland
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50
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Performance and Kinetics of Bioaugmentation, Biostimulation, and Natural Attenuation Processes for Bioremediation of Crude Oil-Contaminated Soils. Processes (Basel) 2020. [DOI: 10.3390/pr8080883] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Bioremediation of contaminated sites is usually limited due to the inadequate availability of nutrients and microorganisms. This study was conducted to assess the impact of bioaugmentation (BA) and biostimulation (BS) on petroleum hydrocarbon degradation efficiency. In addition, treatment performance and kinetics of different remediation processes were investigated. For this purpose, four tanks containing oil-contaminated soils were tested. Tank 1 was operated as the natural attenuation process. Then, a microbial inoculum and nutrients were added to tank 2 to promote BA and BS. In tank 3, only the BA process was adopted, whereas in tank 4, only the BS process was adopted. After 63 days of operation, the total petroleum hydrocarbon (TPH) in tank 2 was reduced from 1674 to 430 mg/kg, with 74% reduction. Tank 1, tank 3, and tank 4 indicated TPH reductions of 35%, 41%, and 66%, respectively. Microbiological analysis of the inoculum indicated that Alcanivorax was the dominant bacterium. The population of TPH degrader bacteria in tank 2 soil was two orders of magnitude higher than in the control tank. Reaction rate data were fitted with a first-order reaction rate model. The Monod kinetic constants, maximum specific growth rate (µmax), and substrate concentration at half-velocity constant (Ks) were also estimated. This study showed that the TPH removal efficiency in the combined BA and BS process was higher than in other processes tested. The populations of TPH degrading microorganisms in soil tanks were positively related to TPH removal efficiency during bioremediation of petroleum-contaminated soils.
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