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Kong T, Sun X, Gu Z, Yang N, Huang Y, Lan L, Gao P, Liu H, Wang Y, Jiang F, Li B, Sun W. Differential Mechanisms of Microbial As(III) and Sb(III) Oxidation and Their Contribution to Tailings Reclamation. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2024; 58:11447-11458. [PMID: 38899977 DOI: 10.1021/acs.est.4c00863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
Mine tailings are extremely oligotrophic environments frequently contaminated with elevated As and Sb, making As(III) and Sb(III) oxidation potentially important energy sources for the tailing microbiome. Although they have been proposed to share similar metabolic pathways, a systemic comparison of the As(III) and Sb(III) oxidation mechanisms and energy utilization efficiencies requires further elucidation. In this study, we employed a combination of physicochemical, molecular, and bioinformatic analyses to compare the kinetic and genetic mechanisms of As(III) and Sb(III) oxidation as well as their respective energy efficiencies for fueling the key nutrient acquisition metabolisms. Thiobacillus and Rhizobium spp. were identified as functional populations for both As(III) and Sb(III) oxidation in mine tailings by DNA-stable isotope probing. However, these microorganisms mediated As(III) and Sb(III) oxidation via different metabolic pathways, resulting in preferential oxidation of Sb(III) over As(III). Notably, both As(III) and Sb(III) oxidation can facilitate nitrogen fixation and phosphate solubilization in mine tailings, with Sb(III) oxidation being more efficient in powering these processes. Thus, this study provided novel insights into the microbial As(III) and Sb(III) oxidation mechanisms and their respective nutrient acquisition efficiencies, which may be critical for the reclamation of mine tailings.
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Affiliation(s)
- Tianle Kong
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Xiaoxu Sun
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Zhibin Gu
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
- School of Environmental Science and Engineering, Tianjin University, Tianjin 300350, China
| | - Nie Yang
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Yuqing Huang
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Ling Lan
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Pin Gao
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Huaqing Liu
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Yize Wang
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Feng Jiang
- Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology (Sun Yat-sen University), Guangzhou 510640, China
| | - Baoqin Li
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
| | - Weimin Sun
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China
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Huang D, Sun X, Ghani MU, Li B, Yang J, Chen Z, Kong T, Xiao E, Liu H, Wang Q, Sun W. Bacteria associated with Comamonadaceae are key arsenite oxidizer associated with Pteris vittata root. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 349:123909. [PMID: 38582183 DOI: 10.1016/j.envpol.2024.123909] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Revised: 03/27/2024] [Accepted: 03/29/2024] [Indexed: 04/08/2024]
Abstract
Pteris vittata (P. vittata), an arsenic (As) hyperaccumulator commonly used in the phytoremediation of As-contaminated soils, contains root-associated bacteria (RAB) including those that colonize the root rhizosphere and endosphere, which can adapt to As contamination and improve plant health. As(III)-oxidizing RAB can convert the more toxic arsenite (As(III)) to less toxic arsenate (As(V)) under As-rich conditions, which may promote plant survial. Previous studies have shown that microbial As(III) oxidation occurs in the rhizospheres and endospheres of P. vittata. However, knowledge of RAB of P. vittata responsible for As(III) oxidation remained limited. In this study, members of the Comamonadaceae family were identified as putative As(III) oxidizers, and the core microbiome associated with P. vittata roots using DNA-stable isotope probing (SIP), amplicon sequencing and metagenomic analysis. Metagenomic binning revealed that metagenome assembled genomes (MAGs) associated with Comamonadaceae contained several functional genes related to carbon fixation, arsenic resistance, plant growth promotion and bacterial colonization. As(III) oxidation and plant growth promotion may be key features of RAB in promoting P. vittata growth. These results extend the current knowledge of the diversity of As(III)-oxidizing RAB and provide new insights into improving the efficiency of arsenic phytoremediation.
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Affiliation(s)
- Duanyi Huang
- College of Environmental Science and Engineering, Hunan University, Changsha 410082, China; Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha 410082, China; National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Xiaoxu Sun
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Muhammad Usman Ghani
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China; Institute of Soil and Environmental Sciences, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Baoqin Li
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Jinchan Yang
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China; School of Environment, Henan Normal University, Xinxiang 453007, China
| | - Zhenyu Chen
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China; School of Environment, Henan Normal University, Xinxiang 453007, China
| | - Tianle Kong
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China; College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
| | - Enzong Xiao
- Key Laboratory of Water Quality and Conservation in the Pearl River Delta, Ministry of Education, School of Environmental Science and Engineering, Guangzhou University, Guangzhou 510006, China
| | - Huaqing Liu
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Qi Wang
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Weimin Sun
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China.
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Lin G, He X, Zeng J, Yang Z, Wang L. Ionome profiling and arsenic speciation provide evidence of arsenite detoxification in rice by phosphate and arsenite-oxidizing bacteria. J Environ Sci (China) 2023; 128:129-138. [PMID: 36801029 DOI: 10.1016/j.jes.2022.08.017] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 08/10/2022] [Accepted: 08/10/2022] [Indexed: 06/18/2023]
Abstract
Arsenite (As(III)) as the most toxic and mobile form is the dominant arsenic (As) species in flooded paddy fields, resulting in higher accumulation of As in paddy rice than other terrestrial crops. Mitigation of As toxicity to rice plant is an important way to safeguard food production and safety. In the current study, As(III)-oxidizing bacteria Pseudomonas sp. strain SMS11 was inoculated with rice plants to accelerate conversion of As(III) into lower toxic arsenate (As(V)). Meanwhile, additional phosphate was supplemented to restrict As(V) uptake by the rice plants. Growth of rice plant was significantly inhibited under As(III) stress. The inhibition was alleviated by the introduction of additional P and SMS11. Arsenic speciation showed that additional P restricted As accumulation in the rice roots via competing common uptake pathways, while inoculation with SMS11 limited As translocation from root to shoot. Ionomic profiling revealed specific characteristics of the rice tissue samples from different treatment groups. Compared to the roots, ionomes of the rice shoots were more sensitive to environmental perturbations. Both extraneous P and As(III)-oxidizing bacteria SMS11 could alleviate As(III) stress to the rice plants through promoting growth and regulating ionome homeostasis.
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Affiliation(s)
- Guobing Lin
- College of Chemistry and Chemical Engineering, Central South University, Changsha 410083, China
| | - Xiaoman He
- College of Chemistry and Chemical Engineering, Central South University, Changsha 410083, China
| | - Jiayuan Zeng
- College of Chemistry and Chemical Engineering, Central South University, Changsha 410083, China
| | - Zhaoguang Yang
- College of Chemistry and Chemical Engineering, Central South University, Changsha 410083, China; Key Laboratory of Hunan Province for Water Environment and Agriculture Product Safety, Central South University, Changsha 410083, China
| | - Lin Wang
- College of Chemistry and Chemical Engineering, Central South University, Changsha 410083, China; Key Laboratory of Hunan Province for Water Environment and Agriculture Product Safety, Central South University, Changsha 410083, China.
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Etesami H, Jeong BR, Raheb A. Arsenic (As) resistant bacteria with multiple plant growth-promoting traits: Potential to alleviate As toxicity and accumulation in rice. Microbiol Res 2023; 272:127391. [PMID: 37121023 DOI: 10.1016/j.micres.2023.127391] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 04/14/2023] [Accepted: 04/20/2023] [Indexed: 05/02/2023]
Abstract
A currently serious agronomic concern for paddy soils is arsenic (As) contamination. Paddy soils are mostly utilized for rice cultivation. Arsenite (As(III)) is prevalent in paddy soils, and its high mobility and toxicity make As uptake by rice substantially greater than that by other food crops. Globally, interest has increased towards using As-resistant plant growth-promoting bacteria (PGPB) to improve plant metal tolerance, promote plant growth, and immobilize As to prevent its uptake and accumulation in the edible parts of rice as much as possible. This review focuses on the As-resistant PGPB characteristics influencing rice growth and the mechanisms by which they function to alleviate As toxicity stress in rice plants. Several recent examples of mechanisms responsible for decreasing the availability of As to rice and coping with As stresses facilitated by the PGPB with multiple PGP traits (e.g., phosphate and silicate solubilization, the production of 1-aminocyclopropane-1-carboxylate deaminase, phytohormones, and siderophore, N2 fixation, sulfate reduction, the biosorption, bioaccumulation, methylation, and volatilization of As, and arsenite oxidation) are also reviewed. In addition, future research needs about the application of As-resistant PGPB with PGP traits to mitigate As accumulation in rice plants are described.
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Affiliation(s)
- Hassan Etesami
- Department of Soil Science, College of Agriculture and Natural Resources, University of Tehran, Tehran, Iran.
| | - Byoung Ryong Jeong
- Department of Horticulture, College of Agriculture & Life Sciences, Gyeongsang National University (GNU), Jinju 52828, South Korea
| | - Alireza Raheb
- Department of Soil Science, College of Agriculture and Natural Resources, University of Tehran, Tehran, Iran
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Khan IU, Qi SS, Gul F, Manan S, Rono JK, Naz M, Shi XN, Zhang H, Dai ZC, Du DL. A Green Approach Used for Heavy Metals 'Phytoremediation' Via Invasive Plant Species to Mitigate Environmental Pollution: A Review. PLANTS (BASEL, SWITZERLAND) 2023; 12:plants12040725. [PMID: 36840073 PMCID: PMC9964337 DOI: 10.3390/plants12040725] [Citation(s) in RCA: 13] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/25/2022] [Revised: 01/28/2023] [Accepted: 02/02/2023] [Indexed: 05/27/2023]
Abstract
Heavy metals (HMs) normally occur in nature and are rapidly released into ecosystems by anthropogenic activities, leading to a series of threats to plant productivity as well as human health. Phytoremediation is a clean, eco-friendly, and cost-effective method for reducing soil toxicity, particularly in weedy plants (invasive plant species (IPS)). This method provides a favorable tool for HM hyperaccumulation using invasive plants. Improving the phytoremediation strategy requires a profound knowledge of HM uptake and translocation as well as the development of resistance or tolerance to HMs. This review describes a comprehensive mechanism of uptake and translocation of HMs and their subsequent detoxification with the IPS via phytoremediation. Additionally, the improvement of phytoremediation through advanced biotechnological strategies, including genetic engineering, nanoparticles, microorganisms, CRISPR-Cas9, and protein basis, is discussed. In summary, this appraisal will provide a new platform for the uptake, translocation, and detoxification of HMs via the phytoremediation process of the IPS.
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Affiliation(s)
- Irfan Ullah Khan
- School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Shan-Shan Qi
- School of Agricultural Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Farrukh Gul
- School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Sehrish Manan
- Biofuels Institute, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Justice Kipkorir Rono
- Department of Biochemistry and Molecular Biology, College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Misbah Naz
- School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Xin-Ning Shi
- School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Haiyan Zhang
- School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
- School of Inspection and Testing Certificate, Changzhou Vocational Institute Engineering, Changzhou 213164, China
| | - Zhi-Cong Dai
- School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Dao-Lin Du
- School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
- Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, Suzhou 215009, China
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Yan W, He X, Wu T, Chen M, Lin J, Chen X, Li Q, Li M, Yan Y, Yao Q. A combined study on Vallisneria spiralis and lanthanum modified bentonite to immobilize arsenic in sediments. ENVIRONMENTAL RESEARCH 2023; 216:114689. [PMID: 36323350 DOI: 10.1016/j.envres.2022.114689] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 10/09/2022] [Accepted: 10/26/2022] [Indexed: 06/16/2023]
Abstract
Submerged plants and lanthanum-modified bentonite (LMB) have important applications for the remediation of contaminated sediments; however, their combined effect on arsenic (As) removal has not been comprehensively evaluated. In this study, the physicochemical properties and changes in soluble As in sediments treated with LMB, Vallisneria spiralis (V. spiralis), and LMB + V. spiralis were observed at three time points (days 15, 35, and 66), and the changes in microbial and As species in sediments on day 66 were analyzed. LMB + V. spiralis treatment was the most effective for As removal. On day 66, the average concentrations of soluble As at a depth of 0-100 mm decreased by 12.71%, 48.81%, and 59.73% following treatment with LMB, V. spiralis, and LMB + V. spiralis, respectively. Further analysis showed that LMB is more effective at removing As(V) than V. spiralis, while V. spiralis is more effective at removing As(III), and the combination of LMB + V. spiralis is more effective for removing both As(III) and As(V) than individual LMB and V. spiralis treatments. LMB + V. spiralis enhanced the transformation of mobile As to Fe2O3/oxyhydroxide-bound As in sediments and the activity of As-oxidizing microorganisms. LMB promoted the growth of V. spiralis and enhanced the removal of As. This study indicates that this combination is an effective method for removing mobile As from sediments, and could effectively inhibit the release of As from sediments to overlying water.
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Affiliation(s)
- Wenming Yan
- State Key Laboratory of Hydrology-Water Resources and Hydraulic Engineering, Hohai University, Nanjing, 210098, China.
| | - Xiangyu He
- State Key Laboratory of Hydrology-Water Resources and Hydraulic Engineering, Hohai University, Nanjing, 210098, China
| | - Tingfeng Wu
- State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing, 210008, China.
| | - Musong Chen
- State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Juan Lin
- School of Geographic Science, Nantong University, Nantong, 226000, China
| | - Xiang Chen
- State Key Laboratory of Hydrology-Water Resources and Hydraulic Engineering, Hohai University, Nanjing, 210098, China
| | - Qi Li
- State Key Laboratory of Hydrology-Water Resources and Hydraulic Engineering, Hohai University, Nanjing, 210098, China
| | - Minjuan Li
- State Key Laboratory of Hydrology-Water Resources and Hydraulic Engineering, Hohai University, Nanjing, 210098, China
| | - Yulin Yan
- State Key Laboratory of Hydrology-Water Resources and Hydraulic Engineering, Hohai University, Nanjing, 210098, China
| | - Qi Yao
- State Key Laboratory of Hydrology-Water Resources and Hydraulic Engineering, Hohai University, Nanjing, 210098, China
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Thongnok S, Siripornadulsil W, Siripornadulsil S. Responses to arsenic stress of rice varieties coinoculated with the heavy metal-resistant and rice growth-promoting bacteria Pseudomonas stutzeri and Cupriavidus taiwanensis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022; 191:42-54. [PMID: 36182828 DOI: 10.1016/j.plaphy.2022.09.014] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Revised: 09/14/2022] [Accepted: 09/16/2022] [Indexed: 06/16/2023]
Abstract
Arsenic (As)-contaminated rice paddy fields are spreading globally, and thus, rice grains with low As accumulation at a safe level for consumption is profoundly needed. Rice is highly susceptible to As accumulation, and the responses to As vary among rice varieties. Here, combinations of the AsIII-oxidizing bacteria Pseudomonas stutzeri strains 4.25, 4.27, or 4.44 and Cupriavidus taiwanensis KKU2500-3 were investigated with respect to their responses to As toxicity and rice growth promotion during the early growth stage. All bacterial strains enhanced antioxidant enzyme activities, including SOD, CAT, APX, GPX, and GR, under As stress in vitro. Uninoculated and coinoculated rice seedlings of three rice varieties (KDML105, RD6, RD10) were cultivated in hydroponic solution without and with a combination of toxic AsIII and less toxic AsV for 30 days. Compared with uninoculated seedlings, the inoculated seedlings showed higher growth parameters and lower As contents in roots, shoots and throughout the plants. The bioconcentration factor (BCF) and translocation factor were reduced in inoculated seedlings. The effective response of rice to As toxicity influenced by bacteria was highest in KDML105, followed by RD6 and RD10. The root sulfide content was correlated with As accumulation in roots, shoots, and total seedlings and the BCFs. P. stutzeri 4.44 and C. taiwanensis KKU2500-3 were the most promising combinations for application in KDML105 cultivation under As-contaminated conditions. Understanding the basic response of rice coinoculated with effective bacteria at the early stage will provide guidelines for rice cultivation under As conditions at other scales.
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Affiliation(s)
- Sarun Thongnok
- Department of Microbiology, Faculty of Science, Khon Kaen University, Khon Kaen, 40002, Thailand
| | - Wilailak Siripornadulsil
- Department of Microbiology, Faculty of Science, Khon Kaen University, Khon Kaen, 40002, Thailand; Research Center for Environmental and Hazardous Substance Management, Khon Kaen University, Khon Kaen, 40002, Thailand
| | - Surasak Siripornadulsil
- Department of Microbiology, Faculty of Science, Khon Kaen University, Khon Kaen, 40002, Thailand; Research Center for Environmental and Hazardous Substance Management, Khon Kaen University, Khon Kaen, 40002, Thailand.
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Sun Y, Wang X, Liu Y, Duan K, Xia Y, Cai Q, Lou L. Long term application of plant growth-promoting bacterium improved grain weight and reduced arsenic accumulation in rice grain: A comparison of 10 bacteria. CHEMOSPHERE 2022; 303:135016. [PMID: 35598785 DOI: 10.1016/j.chemosphere.2022.135016] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2022] [Revised: 05/06/2022] [Accepted: 05/16/2022] [Indexed: 06/15/2023]
Abstract
Rice (Oryza sativa L.) is one of the main food crops, it plays an important role in the human diet. Arsenic (As) contamination in paddy soil inhibits rice growth and reduces rice yield seriously. In addition, As accumulated in rice grains was harmful to human health through the food chain. Using the exogenous method to alleviate As stress and reduce As accumulation in rice grain is one of the potential ways to achieve food safety in polluted farmland. In the present study, 10 bacteria was applied to evaluate the effects of plant growth-promoting bacteria (PGPBs) on rice growth and As accumulation in rice grain. The results showed higher levels of As inhibited PGPB growth, the most tolerant and sensitive bacteria were Bj05 and Ls09, with the growth reduction of 16.9% and 96.7% under 50 mM As, respectively. Most of 10 PGPBs enhanced rice growth and improved rice grain weight under As exposure, among them, Ts06 showed the most effective one. Six of 10 PGPBs reduced rice grain As levels significantly, the highest reduction of grain As was observed in Ts06 inoculated rice, with grain As deceasing to 46.3% of the control. Bj05 was the only one which caused the increase in grain As of Yangdao 6. The Pearson correlation analysis showed grain As concentration negatively correlated with leave As concentration, while did not correlated with total As accumulated in shoot, and soil available As and P. The present results indicated that some PGPBs inhibited As translocation from leave to grain, thus reduced As accumulation in rice grain. Ts06 was suggested to be a candidate as microbial amendments for As-contaminated paddy fields.
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Affiliation(s)
- Yu Sun
- College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Xuejing Wang
- College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Yaping Liu
- College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Kun Duan
- China Tobacco Henan Industrial Co., Ltd., Zhengzhou, 450000, China
| | - Yan Xia
- College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Qingsheng Cai
- College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Laiqing Lou
- College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
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Kashyap S, Chandra R, Kumar B, Verma P. Biosorption efficiency of nickel by various endophytic bacterial strains for removal of nickel from electroplating industry effluents: an operational study. ECOTOXICOLOGY (LONDON, ENGLAND) 2022; 31:565-580. [PMID: 34184169 DOI: 10.1007/s10646-021-02445-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 06/08/2021] [Indexed: 06/13/2023]
Abstract
Realising the hazardous effect of nickel on human health, microbes and plants are effectively used for bioremediation. The endophytic microorganisms have an important role in the phytoremediation of nickel using Vigna radiata. Therefore, in order to harness the potential of microbial strains, the present study was designed to examine the metal biosorption ability of endophytic bacterial strains isolated from plants growing in nickel-contaminated soil. A total of six endophytic nickel resistance bacteria were isolated from the plant Vigna radiata. The metal tolerant bacterial strains were identified following 16 S rRNA gene sequence analysis. Nickel biosorption estimation and plant growth-promoting (PGP) activities of isolated strains were performed and found high nickel biosorption efficiency of 91.3 ± 0.72% at 600 mg L-1 using Bacillus safensis an isolated endophytic strain from Vigna radiata. Furthermore, high indole acetic acid (IAA) and exopolysaccharide (EPS) production were obtained in all the strains as compared to without nickel-containing medium used as control. Moreover, the production of high EPS suggests improved biosorption ability of isolated endophytic strains. In addition, a kinetic study was also performed to evaluate different adsorptions isotherms and support the nickel biosorption ability of endophytic strains. The treatment of nickel electroplating industrial effluent was also demonstrated by isolated endophytic strains. Among six (6) strains, B. cereus showed maximum 57.2 ± 0.62% biosorption efficiency of nickel which resulted in the removal of 1003.50 ± 0.90 mg L-1 of nickel from the electroplating industry effluents containing initial 1791 ± 0.90 mg L-1 of nickel. All other strains were also capable of significant nickel biosorption from electroplating industry effluents as well. Thus, isolated endophytic nickel tolerant strains can be further used at large-scale biosorption of nickel from electroplating industry effluent.
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Affiliation(s)
- Saket Kashyap
- Bioprocess and Bioenergy Laboratory, Department of Microbiology, Central University of Rajasthan, NH-8, Bandarsindri, Kishangarh, Ajmer, 305817, Rajasthan, India
| | - Rachna Chandra
- Terrestrial Ecology Division, Gujarat Institute of Desert Ecology, Mundra Road, Bhuj, 370001, Gujarat, India
| | - Bikash Kumar
- Bioprocess and Bioenergy Laboratory, Department of Microbiology, Central University of Rajasthan, NH-8, Bandarsindri, Kishangarh, Ajmer, 305817, Rajasthan, India
| | - Pradeep Verma
- Bioprocess and Bioenergy Laboratory, Department of Microbiology, Central University of Rajasthan, NH-8, Bandarsindri, Kishangarh, Ajmer, 305817, Rajasthan, India.
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Kumar S, Choudhary AK, Suyal DC, Makarana G, Goel R. Leveraging arsenic resistant plant growth-promoting rhizobacteria for arsenic abatement in crops. JOURNAL OF HAZARDOUS MATERIALS 2022; 425:127965. [PMID: 34894510 DOI: 10.1016/j.jhazmat.2021.127965] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 11/24/2021] [Accepted: 11/29/2021] [Indexed: 05/25/2023]
Abstract
Arsenic is a toxic metalloid categorized under class 1 carcinogen and is detrimental to both plants and animals. Agricultural land in several countries is contaminated with arsenic, resulting in its accumulation in food grains. Increasing global food demand has made it essential to explore neglected lands like arsenic-contaminated lands for crop production. This has posed a severe threat to both food safety and security. Exploration of arsenic-resistant plant growth-promoting rhizobacteria (PGPR) is an environment-friendly approach that holds promise for both plant growth promotion and arsenic amelioration in food grains. However, their real-time performance is dependent upon several biotic and abiotic factors. Therefore, a detailed analysis of associated mechanisms and constraints becomes inevitable to explore the full potential of available arsenic-resistant PGPR germplasm. Authors in this review have highlighted the role and constraints of arsenic-resistant PGPR in reducing the arsenic toxicity in food crops, besides providing the details of arsenic transport in food grains.
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Affiliation(s)
- Saurabh Kumar
- ICAR-Research Complex for Eastern Region, Patna 800014, Bihar, India
| | | | - Deep Chandra Suyal
- Department of Microbiology, Akal College of Basic Sciences, Eternal University, Baru Sahib, Sirmour, 173101, Himachal Pradesh, India
| | - Govind Makarana
- ICAR-Research Complex for Eastern Region, Patna 800014, Bihar, India
| | - Reeta Goel
- GLA University, Mathura 281406, Uttar Pradesh, India
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Mondal S, Pramanik K, Ghosh SK, Pal P, Mondal T, Soren T, Maiti TK. Unraveling the role of plant growth-promoting rhizobacteria in the alleviation of arsenic phytotoxicity: A review. Microbiol Res 2021; 250:126809. [PMID: 34166969 DOI: 10.1016/j.micres.2021.126809] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 06/09/2021] [Accepted: 06/11/2021] [Indexed: 10/21/2022]
Abstract
The toxic metalloid arsenic (As), is a major pollutant of soil and water, imposing severe health concerns on human lives. It enters the food chain mainly through As-contaminated crops. The uptake, translocation and accumulation of As in plant tissue are often controlled by certain soil-inhabiting microbial communities. Among them, indigenous, free-living As-resistant plant growth-promoting rhizobacteria (PGPR) plays a pivotal role in As-immobilization. Besides, the plant's inability to withstand As after a threshold level is actively managed by these PGPR increasing As-tolerance in host plants by a synergistic plant-microbe interaction. The dual functionality of As-resistant PGPR i.e., phytostimulation and minimization of As-induced phytotoxic damages are one of the main focal points of this review article. It is known that such PGPR having the functional arsenic-resistant genes (in ars operon) including As-transporters, As-transforming genes contributed to the As accumulation and detoxification/transformation respectively. Apart from assisting in nutrient acquisition and modulating phytohormone levels, As-resistant PGPR also influences the antioxidative defense system in plants by maneuvering multiple enzymatic and non-enzymatic antioxidants. Furthermore, they are effective in reducing membrane damage and electrolyte leakage in plant cells. As-induced photosynthetic damage is also found to be salvaged by As-resistant PGPR. Briefly, the eco-physiological, biochemical and molecular mechanisms of As-resistant PGPR are thus elaborated here with regard to the As-exposed crops.
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Affiliation(s)
- Sayanta Mondal
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P.O.-Rajbati, PIN-713104, West Bengal, India.
| | - Krishnendu Pramanik
- Mycology and Plant Pathology Laboratory, Department of Botany, Siksha Bhavana, Visva-Bharati, Santiniketan, Birbhum, PIN-731235, West Bengal, India.
| | - Sudip Kumar Ghosh
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P.O.-Rajbati, PIN-713104, West Bengal, India.
| | - Priyanka Pal
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P.O.-Rajbati, PIN-713104, West Bengal, India.
| | - Tanushree Mondal
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P.O.-Rajbati, PIN-713104, West Bengal, India.
| | - Tithi Soren
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P.O.-Rajbati, PIN-713104, West Bengal, India.
| | - Tushar Kanti Maiti
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P.O.-Rajbati, PIN-713104, West Bengal, India.
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12
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Knežević M, Berić T, Buntić A, Delić D, Nikolić I, Stanković S, Stajković-Srbinović O. Potential of root nodule nonrhizobial endophytic bacteria for growth promotion of Lotus corniculatus L. and Dactylis glomerata L. J Appl Microbiol 2021; 131:2929-2940. [PMID: 34003543 DOI: 10.1111/jam.15152] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Revised: 05/11/2021] [Accepted: 05/11/2021] [Indexed: 11/29/2022]
Abstract
AIMS This research aimed to isolate and characterize nonrhizobial endophytic bacteria from root nodules of Medicago sativa L. and Lotus corniculatus L. with plant growth-promoting characteristics and to test its activity in a pot experiment with acid soil. METHODS AND RESULTS Out of 44 nonrhizobial isolates, the majority exhibited indole-3-acetic acid (IAA) production; 29 produced siderophores, few isolates performed phosphate solubilization and/or produced lytic enzymes, while 30% of isolates showed notable antifungal activity. The most promising strains were identified as members of Bacillus, Pseudomonas and Serratia genera, based on 16S rRNA. Bacillus megaterium DZK1BH exhibited the overall best attributes for plant growth promotion and positively influenced the growth of L. corniculatus and Dactylis glomerata. CONCLUSIONS Root nodule endophytic B. megaterium DZK1BH could potentially be used as a biofertilizer for growing L. corniculatus L. and D. glomerata L. in acid soils, while Bacillus mojavensis L3 is a candidate for further antifungal potential investigation. SIGNIFICANCE OF IMPACT OF THE STUDY The use of root nodule endophytic bacteria with PGP traits may find its future application in organic agriculture, as their utilization could decrease the use of chemical fertilizers and pesticides and simultaneously promote plant growth, especially in soils with low production quality.
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Affiliation(s)
- M Knežević
- Department of Microbiology, Institute of Soil Science, Belgrade, Serbia
| | - T Berić
- Faculty of Biology, University of Belgrade, Belgrade, Serbia
| | - A Buntić
- Department of Microbiology, Institute of Soil Science, Belgrade, Serbia
| | - D Delić
- Department of Microbiology, Institute of Soil Science, Belgrade, Serbia
| | - I Nikolić
- Faculty of Biology, University of Belgrade, Belgrade, Serbia
| | - S Stanković
- Faculty of Biology, University of Belgrade, Belgrade, Serbia
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Deng F, Zeng F, Chen G, Feng X, Riaz A, Wu X, Gao W, Wu F, Holford P, Chen ZH. Metalloid hazards: From plant molecular evolution to mitigation strategies. JOURNAL OF HAZARDOUS MATERIALS 2021; 409:124495. [PMID: 33187800 DOI: 10.1016/j.jhazmat.2020.124495] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Revised: 09/22/2020] [Accepted: 11/03/2020] [Indexed: 05/25/2023]
Abstract
Metalloids such as boron and silicon are key elements for plant growth and crop productivity. However, toxic metalloids such as arsenic are increasing in the environment due to inputs from natural sources and human activities. These hazardous metalloids can cause serious health risks to humans and animals if they enter the food chain. Plants have developed highly regulated mechanisms to alleviate the toxicity of metalloids during their 500 million years of evolution. A better understanding the molecular mechanisms underlying the transport and detoxification of toxic metalloids in plants will shed light on developing mitigation strategies. Key transporters and regulatory proteins responsive to toxic metalloids have been identified through evolutionary and molecular analyses. Moreover, knowledge of the regulatory proteins and their pathways can be used in the breeding of crops with lower accumulation of metalloids. These findings can also assist phytoremediation by the exploration of plants such as fern species that hyperaccumulate metalloids from soils and water, and can be used to engineer plants with elevated uptake and storage capacity of toxic metalloids. In summary, there are solutions to remediate contamination due to toxic metalloids by combining the research advances and industrial technologies with agricultural and environmental practices.
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Affiliation(s)
- Fenglin Deng
- Collaborative Innovation Center for Grain Industry, College of Agriculture, Yangtze University, Jingzhou, China
| | - Fanrong Zeng
- Collaborative Innovation Center for Grain Industry, College of Agriculture, Yangtze University, Jingzhou, China; College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Guang Chen
- Collaborative Innovation Center for Grain Industry, College of Agriculture, Yangtze University, Jingzhou, China; College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Xue Feng
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Adeel Riaz
- Collaborative Innovation Center for Grain Industry, College of Agriculture, Yangtze University, Jingzhou, China
| | - Xiaojian Wu
- Collaborative Innovation Center for Grain Industry, College of Agriculture, Yangtze University, Jingzhou, China
| | - Wei Gao
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan University, Kaifeng, China
| | - Feibo Wu
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Paul Holford
- School of Science, Western Sydney University, Penrith, NSW, Australia
| | - Zhong-Hua Chen
- School of Science, Western Sydney University, Penrith, NSW, Australia; Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia.
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14
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Ghosh A, Pramanik K, Bhattacharya S, Mondal S, Ghosh SK, Ghosh PK, Maiti TK. Abatement of arsenic-induced phytotoxic effects in rice seedlings by an arsenic-resistant Pantoea dispersa strain. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:21633-21649. [PMID: 33411291 DOI: 10.1007/s11356-020-11816-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 11/23/2020] [Indexed: 06/12/2023]
Abstract
Population detonation and rapid industrialization are the major factors behind the reduction in cultivable land that affects crop production seriously. This situation is further being deteriorated due to the negative effects of abiotic stresses. Under such conditions, plant growth-promoting rhizobacteria (PGPR) are found to improve crop production which is essential for sustainable agriculture. This study is focused on the isolation of potent arsenic (As)-resistant PGPR from the agricultural land of West Bengal, India, and its application to reduce As translocation in rice seedlings. After screening, an As-resistant PGPR strain AS18 was identified by phenotypic characters and 16S rDNA sequence-based homology as Pantoea dispersa. This strain displayed nitrogen fixation, phosphate solubilization, 1-aminocyclopropane-1-carboxylic acid deaminase (ACCD) activity, indole-3-acetic acid (IAA) production, in addition to As (III) resistance up to 3750 μg/mL. The As removal efficiency of this strain was up to 93.12% from the culture medium as evidenced by AAS. The bioaccumulation property of AS18 strain was further validated by TEM-EDAX-XRD-XRF-FTIR studies. This strain showed significant morpho-biochemical improvements including antioxidant enzymatic activities and As-minimization in plant (rice) cells. Thus, being an As-resistant potent PGPR, AS18 strain is expected to be applied in As-spiked agricultural fields for bioremediation and phytostimulation.
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Affiliation(s)
- Antara Ghosh
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Purba Bardhaman, West Bengal, 713104, India
| | - Krishnendu Pramanik
- Mycology and Plant Pathology Laboratory, Department of Botany, Siksha Bhavana, Visva-Bharati, Santiniketan, Birbhum, West Bengal, 731235, India
| | - Shatabda Bhattacharya
- Nanospinics Laboratory, Department of Materials Science & Engineering, Seoul National University, Seoul, 151-744, South Korea
| | - Sayanta Mondal
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Purba Bardhaman, West Bengal, 713104, India
| | - Sudip Kumar Ghosh
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Purba Bardhaman, West Bengal, 713104, India
| | | | - Tushar Kanti Maiti
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Purba Bardhaman, West Bengal, 713104, India.
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15
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Irshad S, Xie Z, Mehmood S, Nawaz A, Ditta A, Mahmood Q. Insights into conventional and recent technologies for arsenic bioremediation: A systematic review. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:18870-18892. [PMID: 33586109 DOI: 10.1007/s11356-021-12487-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2020] [Accepted: 01/11/2021] [Indexed: 05/22/2023]
Abstract
Arsenic (As) bioremediation has been an economical and sustainable approach, being practiced widely under several As-contaminated environments. Bioremediation of As involves the use of bacteria, fungi, yeast, plants, and genetically modified organisms for detoxification/removal of As from the contaminated site. The understanding of multi-factorial biological components involved in these approaches is complex and more and more efforts are on their way to make As bioremediation economical and efficient. In this regard, we systematically reviewed the recent literature (n=200) from the last two decades regarding As bioremediation potential of conventional and recent technologies including genetically modified plants for phytoremediation and integrated approaches. Also, the responsible mechanisms behind different approaches have been identified. From the literature, it was found that As bioremediation through biosorption, bioaccumulation, phytoextraction, and volatilization involving As-resistant microbes has proved a very successful technology. However, there are various pathways of As tolerance of which the mechanisms have not been fully understood. Recently, phytosuction separation technology has been introduced and needs further exploration. Also, integrated approaches like phytobial, constructed wetlands using As-resistant bacteria with plant growth-promoting activities have not been extensively studied. It is speculated that the integrated bioremediation approaches with practical applicability and reliability would prove most promising for As remediation. Further technological advancements would help explore the identified research gaps in different approaches and lead us toward sustainability and perfection in As bioremediation.
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Affiliation(s)
- Sana Irshad
- School of Environmental Studies, China University of Geosciences, Wuhan, 430074, People's Republic of China
| | - Zuoming Xie
- School of Environmental Studies, China University of Geosciences, Wuhan, 430074, People's Republic of China
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, People's Republic of China
| | - Sajid Mehmood
- Guangdong Provincial Key Laboratory for Radionuclides Pollution Control and Resources, School of Environmental Science and Engineering, Guangzhou University, Guangzhou, 510006, China
| | - Asad Nawaz
- Jiangsu Key Laboratory of Crop Genetics and Physiology, Key Laboratory of Plant Functional Genomics of the Ministry of Education, College of Agriculture, Yangzhou University, Yangzhou, 225009, Jiangsu, People's Republic of China
| | - Allah Ditta
- Department of Environmental Sciences, Shaheed Benazir Bhutto University Sheringal, Upper Dir, Khyber Pakhtunkhwa, 18000, Pakistan.
- School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Perth, WA, 6009, Australia.
| | - Qaisar Mahmood
- Department of Environmental Sciences, COMSATS University Islamabad, Abbottabad Campus, Abbottabad, 22060, Pakistan.
- School of Biotechnology and Food Engineering, Huanghuai University, Zhumadian, 463000, China.
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16
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Singh H, Bhat JA, Singh VP, Corpas FJ, Yadav SR. Auxin metabolic network regulates the plant response to metalloids stress. JOURNAL OF HAZARDOUS MATERIALS 2021; 405:124250. [PMID: 33109410 DOI: 10.1016/j.jhazmat.2020.124250] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Revised: 09/17/2020] [Accepted: 10/08/2020] [Indexed: 05/13/2023]
Abstract
Metalloids are among the major pollutants posing a risk to the environment and global food security. Plant roots uptake these toxic metalloids from the soil along with other essential minerals. Plants respond to metalloid stress by regulating the distribution and levels of various endogenous phytohormones. Recent research showed that auxin is instrumental in mediating resilience to metalloid-induced stress in plants. Exogenous supplementation of the auxin or plant growth-promoting micro-organisms (PGPMs) alleviates metalloid uptake, localization, and accumulation in the plant tissues, thereby improving plant growth under metalloid stress. Moreover, auxin triggers various biological responses such as the production of enzymatic and non-enzymatic antioxidants to combat nitro-oxidative stress induced by the metalloids. However, an in-depth understanding of the auxin stimulated molecular and physiological responses to the metalloid toxicity needs to be investigated in future studies. The current review attempts to provide an update on the recent advances and the current state-of-the-art associated with auxin and metalloid interaction, which could be used as a start point to develop biotechnological tools and create an eco-friendly environment.
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Affiliation(s)
- Harshita Singh
- Department of Biotechnology, Indian Institute of Technology, Roorkee 247667, Uttarakhand, India
| | - Javaid Akhter Bhat
- National Center for Soybean Improvement, Key L aboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China
| | - Vijay Pratap Singh
- Plant Physiology Laboratory, Department of Botany, C.M.P. Degree College, University of Allahabad, Prayagraj 211002, India
| | - Francisco J Corpas
- Department of Biochemistry, Cell and Molecular Biology, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas (CSIC), C/Profesor Albareda, 1, 18008 Granada, Spain
| | - Shri Ram Yadav
- Department of Biotechnology, Indian Institute of Technology, Roorkee 247667, Uttarakhand, India.
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17
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Hou XL, Han H, Tigabu M, Li QY, Li ZX, Zhu CL, Huang SQ, Cai LP, Liu AQ. Lead contamination alters enzyme activities and microbial composition in the rhizosphere soil of the hyperaccumulator Pogonatherum crinitum. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 207:111308. [PMID: 32931972 DOI: 10.1016/j.ecoenv.2020.111308] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Revised: 09/04/2020] [Accepted: 09/05/2020] [Indexed: 06/11/2023]
Abstract
Pogonatherum crinitum is a promising lead (Pb) hyperaccumulator; however, the effects of Pb contamination on P. crinitum rhizosphere soil enzymatic activities and microbial composition remain largely unexplored. Thus, an indoor experiment was conducted by cultivating P. crinitum seedlings and exposing them to four Pb concentrations (0, 1,000, 2000 and 3000 mg/kg Pb). Protease, urease, acid phosphatase and invertase activities were determined using standard methods while soil bacterial composition was determined by 16 S rDNA sequencing. The results showed that rhizosphere soil acid phosphatase activity significantly increased with increasing Pb concentration, while urease activity was significantly greater in rhizosphere soil contaminated with 1000 and 2000 mg/kg than in the control. There was a clear shift in bacterial composition during phytoremediation by P. crinitum. Compared to the control, Bacteroidetes was more abundant in all Pb-contaminated soils, Actinobacteria was more abundant in 1000 mg/kg Pb-treated soil, and Firmicutes was more abundant in 3000 mg/kg Pb-treated soil. Positive correlations were observed between dominant bacterial phyla and soil enzyme activities. Metabolic pathways, such as ABC transporter, quinine reductase, and ATP-binding protein were significantly increased in rhizosphere soil bacteria with Pb contamination. In conclusion, Pb contamination differentially influenced the activities of rhizosphere soil enzymes, specifically increasing acid phosphatase and urease activities, and alters the dominance of soil bacteria through up-regulation of genes related to some metabolic pathways. The strong correlations between dominant bacterial phyla and enzymatic activities suggest synergetic effects on the growth of P. crinitum during Pb contamination.
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Affiliation(s)
- Xiao-Long Hou
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China; Key Laboratory of the State Forestry and Grassland Administration for Soil and Water Conservation in Southern Red Soil Region, Fuzhou, 350002, China
| | - Hang Han
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Mulualem Tigabu
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China; Southern Swedish Forest Research Centre, Swedish University of Agricultural Sciences, Box 49, 230 53, Alnarp, Sweden
| | - Qi-Yan Li
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Zong-Xun Li
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Chen-Lu Zhu
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Si-Qi Huang
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Li-Ping Cai
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China; Key Laboratory of the State Forestry and Grassland Administration for Soil and Water Conservation in Southern Red Soil Region, Fuzhou, 350002, China
| | - Ai-Qin Liu
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, China; Key Laboratory of the State Forestry and Grassland Administration for Soil and Water Conservation in Southern Red Soil Region, Fuzhou, 350002, China.
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18
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Wang K, Li Y, Wu Y, Qiu Z, Ding Z, Wang X, Chen W, Wang R, Fu F, Rensing C, Yang G. Improved grain yield and lowered arsenic accumulation in rice plants by inoculation with arsenite-oxidizing Achromobacter xylosoxidans GD03. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 206:111229. [PMID: 32889310 DOI: 10.1016/j.ecoenv.2020.111229] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Revised: 07/31/2020] [Accepted: 08/23/2020] [Indexed: 06/11/2023]
Abstract
Arsenite is the predominant arsenic species in flooded paddy soil, and arsenite bioaccumulation in rice grains has been identified as a major problem in many Asian countries. Lowering arsenite level in rice plants and grain via accelerating arsenite oxidation is a potential strategy to help populations, who depended on rice consumption, to reduce the internal exposure level of arsenic. We herein isolated a strain, Achromobacter xylosoxidans GD03, with the high arsenite-oxidizing ability and plant growth-promoting traits. We observed that arsenite exposure could promote A. xylosoxidans GD03 to excrete indole-3-acetic acid and thus promoted rice growth. The pot culture experiments of Indica rice cultivar Guang You Ming 118 (GYM118) demonstrated that A. xylosoxidans GD03 inoculation of paddy soil (4.5-180 × 108 CFU GD03/kg soil) significantly accelerated arsenite oxidation in flooded soil. The daily arsenic oxidation rate with GD03 inoculation was 1.5-3.3 times as that without strain GD03 inoculation within the whole growth period of Indica GYM118 in the presence of the native microflora. It thus led to a 34-69%, 43-74%, 24-76% and 35-57% decrease in arsenite concentration of the stems, leaves, bran and grain of Indica GYM118 respectively and a 59-96% increase in rice grain yield. The paddy soil inoculated with 40.0 mL/kg of A. xylosoxidans GD03 resulted in a lowest As(III) concentrations in all rice organs of Indica GYM118, which equivalent to only 24-50% of the As(III) concentrations in the group without GD03 inoculation. The results highlight that a highly arsenite-oxidizing bacterium could accelerate arsenite oxidation of paddy soil when facing competition with the native microflora, thus decrease arsenic toxicity and bioavailable soil arsenic.
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Affiliation(s)
- KaiTeng Wang
- Fujian Provincial Key Laboratory of Agroecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China
| | - YuanPing Li
- Institute of Environmental Microbiology, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China
| | - YongChen Wu
- Fujian Provincial Key Laboratory of Agroecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China
| | - ZongQing Qiu
- Fujian Provincial Key Laboratory of Agroecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China
| | - ZhenXi Ding
- Fujian Provincial Key Laboratory of Agroecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China
| | - XingJu Wang
- Fujian Provincial Key Laboratory of Agroecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China
| | - Wei Chen
- Fujian Provincial Key Laboratory of Agroecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China
| | - RenJie Wang
- Institute of Environmental Microbiology, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China
| | - FengFu Fu
- Key Laboratory for Analytical Science of Food Safety and Biology of MOE, Fujian Provincial Key Lab of Analysis and Detection for Food Safety, College of Chemistry, Fuzhou University, Fuzhou, Fujian, 350116, China.
| | - Christopher Rensing
- Institute of Environmental Microbiology, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China.
| | - GuiDi Yang
- Fujian Provincial Key Laboratory of Agroecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China.
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19
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Zhen Z, Yan C, Zhao Y. Epiphytic bacterial community enhances arsenic uptake and reduction by Myriophyllum verticillatum. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:44205-44217. [PMID: 32757129 DOI: 10.1007/s11356-020-10274-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2020] [Accepted: 07/27/2020] [Indexed: 06/11/2023]
Abstract
Microbes play an important role in the biotransformation of arsenic (As) speciation in various environments. Nevertheless, whether epiphytic bacteria that attached on submerged macrophytes have the potential to influence As speciation still remains unclear. In this study, sterile or nonsterile Myriophyllum verticillatum was cultured with arsenite (As(III)) or arsenate (As(V)) to investigate the impact of epiphytic bacterial community on As uptake, transformation, and efflux. Results showed that both sterile and nonsterile M. verticillatum did not display substantial As(III) oxidation, suggesting that neither M. verticillatum nor epiphytic bacterial community has the capacities of As(III) oxidation. However, sterile M. verticillatum exhibited capacity for As(V) reduction, and the presence of epiphytic bacterial community substantially enhanced the proportions of As(III) in the medium (from 39.91 to 98.44%), indicating that epiphytic bacterial community contributes significantly to As(V) reduction in the medium. The presence of epiphytic bacterial community elevated As accumulation (by up to 2.06-fold) in plants when exposed to As(V). Results also showed that epiphytic bacterial community contributed little to As(III) efflux. Quantitative PCR of As metabolism genes revealed the dominance of the respiratory As(V) reductase genes (arrA) in epiphytic bacterial community, which might play a significant role in As(V) reduction in aquatic environments. Phylogenetic analysis of the arrA genes revealed the widely distribution and diversity of As(V)-respiring bacteria. These results highlighted the substantial impact of the epiphytic bacterial community associated with submerged aquatic macrophytes on As biogeochemistry in wetland and water environments.
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Affiliation(s)
- Zhuo Zhen
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Changzhou Yan
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China.
| | - Yuan Zhao
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
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20
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Huang H, Zhao Y, Xu Z, Ding Y, Zhou X, Dong M. A high Mn(II)-tolerance strain, Bacillus thuringiensis HM7, isolated from manganese ore and its biosorption characteristics. PeerJ 2020; 8:e8589. [PMID: 32742761 PMCID: PMC7363044 DOI: 10.7717/peerj.8589] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2019] [Accepted: 01/17/2020] [Indexed: 12/04/2022] Open
Abstract
Microorganisms play a significant part in detoxifying and immobilizing excessive metals. The present research isolated a strain (HM7) with high Mn(II) tolerance from Mn(II)-contaminated soil samples. The 16S rDNA sequence analysis showed that HM7 had a 99% similarity to Bacillus thuringiensis, which can survive under a high concentration 4,000 mg/L of Mn(II), and the highest removal rate was up to 95.04% at the concentration of 400 mg/L. The highest Mn(II) removal rate was detected at the contact time 72 h, temperature 30 °C, and pH 5.0, while the differences in strain growth and Mn(II) removal rate among different inoculation doses were insignificant. Scanning electron microscopy indicated B. thuringiensis HM7 cells appeared irregular and cracked under Mn(II) stress. Fourier transform infrared exhibited that functional groups like carboxyl, hydroxyl, amino, sulfhydryl groups, and amide bands might take part in the complexation of Mn(II). In addition, HM7 suggested the ability of indoleacetic acid production, siderophore production, and P’ solubilization potential. Therefore, HM7 might have a potential to promote metal absorption by changing the form of heavy metals, and the experiments supported the application of B. thuringiensis HM7 as a biological adsorbent in Mn(II) contaminated environment remediation.
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Affiliation(s)
- Huimin Huang
- Hunan Research Center of Engineering Technology for Utilization of Environmental and Resources Plant, Central South University of Forestry and Technology, Changsha, Hunan, China
| | - Yunlin Zhao
- Hunan Research Center of Engineering Technology for Utilization of Environmental and Resources Plant, Central South University of Forestry and Technology, Changsha, Hunan, China
| | - Zhenggang Xu
- Hunan Research Center of Engineering Technology for Utilization of Environmental and Resources Plant, Central South University of Forestry and Technology, Changsha, Hunan, China
| | - Yi Ding
- Hunan Research Center of Engineering Technology for Utilization of Environmental and Resources Plant, Central South University of Forestry and Technology, Changsha, Hunan, China
| | - Xiaomei Zhou
- School of Material and Chemical Engineering, Hunan City University, Yiyang, Hunan, China
| | - Meng Dong
- School of Material and Chemical Engineering, Hunan City University, Yiyang, Hunan, China
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21
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Rahman Z, Singh VP. Bioremediation of toxic heavy metals (THMs) contaminated sites: concepts, applications and challenges. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:27563-27581. [PMID: 32418096 DOI: 10.1007/s11356-020-08903-0] [Citation(s) in RCA: 59] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2019] [Accepted: 04/15/2020] [Indexed: 06/11/2023]
Abstract
Heavy metal contamination is a global issue, where the prevalent contaminants are arsenic (As), cadmium (Cd), chromium (Cr)(VI), mercury (Hg), and lead (Pb). More often, they are collectively known as "most problematic heavy metals" and "toxic heavy metals" (THMs). Their treatment through a variety of biological processes is one of the prime interests in remediation studies, where heavy metal-microbe interaction approaches receive high interest for their cost effective and ecofriendly solutions. In this review, we provide an up to date information on different microbial processes (bioremediation) for the removal of THMs. For the same, emphasis is put on oxidation-reduction, biomineralization, bioprecipitation, bioleaching, biosurfactant technology, biovolatilization, biosorption, bioaccumulation, and microbe-assisted phytoremediation with their selective advantages and disadvantages. Further, the literature briefly discusses about the various setups of cleaning processes of THMs in environment under ex situ and in situ applications. Lately, the study sheds light on the manipulation of microorganisms through genetic engineering and nanotechnology for their advanced treatment approaches.
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Affiliation(s)
- Zeeshanur Rahman
- Department of Botany, Zakir Husain Delhi College, University of Delhi, Delhi, India.
- Department of Botany, University of Delhi, Delhi, India.
| | - Ved Pal Singh
- Department of Botany, University of Delhi, Delhi, India
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22
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Marwa N, Mishra N, Singh N, Mishra A, Saxena G, Pandey V, Singh N. Effect of rhizospheric inoculation of isolated arsenic (As) tolerant strains on growth, As-uptake and bacterial communities in association with Adiantum capillus-veneris. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 196:110498. [PMID: 32247957 DOI: 10.1016/j.ecoenv.2020.110498] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2019] [Revised: 03/05/2020] [Accepted: 03/16/2020] [Indexed: 05/03/2023]
Abstract
Two arsenic (As) hyper-tolerant bacterial strains NM01 Paracoccus versutus and NM04 Aeromonas caviae were isolated from As polluted site of West Bengal, India. The strains not only possess the potential to tolerate up to 20,000 mgl-1 As(V) and 10,000 mgl-1 As(III) but also possess plant growth promoting (PGP) traits like phosphate solubilization, siderophore production, IAA production. Greenhouse pot experiments were conducted to assess the effect of rhizospheric inoculation of both the strains individually and in consortia in As accumulation by Adiantum capillus-veneries. It was observed that the microbial inoculation significantly (p < 0.05) increased the synthesis of thiolic compounds and thus, enhanced As accumulation with translocation factor (TF) > 1. The strains regulated endogenous phytohormone up to 90% and 77.9% increase in auxin of consortia inoculated root and shoot, respectively. Interestingly, inoculation of the isolated strains augmented rhizospheric microbial diversity which was negatively affected by heavy metal. The results of high-throughput Illumina MiSeq sequencing technique to observe the composition of the bacterial community revealed 11,536 unique bacterial operational taxonomic units (OTUs) from As + S (non-inoculated), whereas 11,884 from Consortia As + S (inoculated) rhizospheric soil samples. Inoculated soil displayed higher bacterial diversity indices (ACE and Chao 1) with the dominant bacterial phyla Proteobacteria, Actinobacteria and Firmicutes. Our results highlight the innate PGP abilities of the strains and its potential to facilitate phytoextraction by enhancing As accumulation in the shoot.
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Affiliation(s)
- Naina Marwa
- Plant Ecology and Climate Change Science, National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226001, UP, India; Department of Botany, University of Lucknow, UP, India.
| | - Nishtha Mishra
- Division of Microbial Technology, National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226001, UP, India
| | - Namrata Singh
- Plant Ecology and Climate Change Science, National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226001, UP, India
| | - Aradhana Mishra
- Division of Microbial Technology, National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226001, UP, India
| | - Gauri Saxena
- Department of Botany, University of Lucknow, UP, India
| | - Vivek Pandey
- Plant Ecology and Climate Change Science, National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226001, UP, India
| | - Nandita Singh
- Plant Ecology and Climate Change Science, National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226001, UP, India.
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23
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Liu Z, Wang H, Xu W, Wang Z. Isolation and evaluation of the plant growth promoting rhizobacterium Bacillus methylotrophicus (DD-1) for growth enhancement of rice seedling. Arch Microbiol 2020; 202:2169-2179. [PMID: 32519022 DOI: 10.1007/s00203-020-01934-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Revised: 05/28/2020] [Accepted: 06/01/2020] [Indexed: 11/29/2022]
Abstract
Bacillus methylotrophicus has been demonstrated to promote growth of various plants, whereas the promoting effect of B. methylotrophicus on rice growth has been rarely reported. In this study, B. methylotrophicus DD-1, capable of efficiently promoting the growth of rice, was isolated from the root soil of rice plants. The isolate exhibited potassium-solubilizing (1.18 mg/L), Indole-3-acetic acid (IAA) (87.26 mg/L), Gibberellic acid (GA) (25.91 mg/L) and Siderophore production activity (52.32%). As indicated from the result, plant growth parameters (e.g., dry weight, tiller number, root and shoot length) of rice seedlings treated with the isolate DD-1 were more effective than those of the control group in pot and soilless culture experiments. Moreover, the adsorption capacity of rice roots which were soaked in the bacterial suspension of isolate increased with the increase in concentration and absorption time. In sterilized and unsterilized soil, conformation of root colonization activity by bacterial isolate established by its nearer existence to the rice root. Thus, the B. methylotrophicus DD-1 enhances plant growth promotion by multifarious growth promoting and root colonization traits, thereby augmenting potassium level in soil. Henceforth, the potential bacterium could be exploited for the development of biological fertilizer, leading towards sustainable agronomy.
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Affiliation(s)
- Zeping Liu
- School of Life Science and Agriculture and Forestry, Qiqihar University, Qiqihar, 161006, Heilongjiang, China.,Heilongjiang Provincial Technology Innovation Center of Agromicrobial Preparation Industrialization, Qiqihar, 161006, Heilongjiang, China
| | - Hengxu Wang
- School of Life Science and Agriculture and Forestry, Qiqihar University, Qiqihar, 161006, Heilongjiang, China.,Heilongjiang Provincial Technology Innovation Center of Agromicrobial Preparation Industrialization, Qiqihar, 161006, Heilongjiang, China
| | - Weihui Xu
- School of Life Science and Agriculture and Forestry, Qiqihar University, Qiqihar, 161006, Heilongjiang, China.,Heilongjiang Provincial Technology Innovation Center of Agromicrobial Preparation Industrialization, Qiqihar, 161006, Heilongjiang, China
| | - Zhigang Wang
- School of Life Science and Agriculture and Forestry, Qiqihar University, Qiqihar, 161006, Heilongjiang, China. .,Heilongjiang Provincial Technology Innovation Center of Agromicrobial Preparation Industrialization, Qiqihar, 161006, Heilongjiang, China.
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24
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Loni PC, Wu M, Wang W, Wang H, Ma L, Liu C, Song Y, H Tuovinen O. Mechanism of microbial dissolution and oxidation of antimony in stibnite under ambient conditions. JOURNAL OF HAZARDOUS MATERIALS 2020; 385:121561. [PMID: 31740307 DOI: 10.1016/j.jhazmat.2019.121561] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2019] [Revised: 09/15/2019] [Accepted: 10/27/2019] [Indexed: 06/10/2023]
Abstract
In this study, we demonstrate that a bacterial isolate Paraccocus versutus XT0.6 from the Xikuangshan antimony mine, the world largest antimony deposit, is capable of stibnite dissolution, oxidation of Sb(III), and formation of secondary Sb(V) bearing mineral. The isolate could oxidize dissolved Sb(III) aerobically and anaerobically. It was able to dissolve Sb(III) in solid minerals, which was subsequently oxidized to Sb(V) completely. Part of Sb(V) was scavenged by the formation of secondary Sb(V)-bearing mineral mopungite [NaSb(OH)6] in the biotic experiments. In contrast, Sb(III) released from mineral/rocks was only partially oxidized to Sb(V) and no secondary Sb-bearing mineral was formed in abiotic controls. These results demonstrated that microbial processes involved in the mobilization, oxidation, and transformation of antimony in minerals/rocks under ambient environmental conditions and offer new insights in biogeochemistry of Sb at mining areas.
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Affiliation(s)
- Prakash C Loni
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China
| | - Mengxiaojun Wu
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China
| | - Weiqi Wang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China
| | - Hongmei Wang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China; School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China.
| | - Liyuan Ma
- School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China
| | - Chaoyang Liu
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China
| | - Yuyang Song
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China
| | - Olli H Tuovinen
- Department of Microbiology, Ohio State University, Columbus, OH 43210, USA
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25
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Aw X, Z L, Wc L, Zh Y. The effect of plant growth-promoting rhizobacteria (PGPR) on arsenic accumulation and the growth of rice plants (Oryza sativa L.). CHEMOSPHERE 2020; 242:125136. [PMID: 31654806 DOI: 10.1016/j.chemosphere.2019.125136] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2019] [Revised: 10/14/2019] [Accepted: 10/16/2019] [Indexed: 06/10/2023]
Abstract
Large areas of paddy fields in southern China have been contaminated by arsenic (As), which causes serious problems such as the reduction of grain yield and high As concentrations in brown rice. To test the possibility of using plant growth-promoting rhizobacteria (PGPR) to promote rice growth and decrease As accumulation in brown rice in such paddy fields, three As-resistant PGPRs (strains S6, S7 and S10) were isolated and incorporated into two rice cultivars (Zhendao 14 and Jianyou G2) grown in different environments. The results showed that all PGPRs promoted rice growth (grain yield increased by 10.50-51.30% under greenhouse conditions and by 4.83-9.16% in paddy fields) and reduced As damage in rice. Specifically, S10 decreased As accumulation in brown rice in both greenhouse (3.50-26.01%) and paddy-field conditions (9.26-10.50%) by significantly reducing the available As concentration in rhizospheric soil, especially in the Dabaoshan-B field (34.00%). Conversely, in greenhouse condition, strains S6 and S7 increased As concentrations by 6.10-20.10% and 2.14-14.60%, respectively. Our results suggested that PGPR inoculation could be used to decrease As accumulation and promote rice growth in As-contaminated paddy fields. However, as the effects of PGPRs differed by strain and depended on environmental factors, careful selection of the strains and environmental conditions, and pre-testing, will be essential before applying PGPRs to As-contaminated paddy fields.
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Affiliation(s)
- Xiao Aw
- School of Life Sciences, Sun Yat-sen University, Guangzhou, 510006, People's Republic of China
| | - Li Z
- School of Life Sciences, Sun Yat-sen University, Guangzhou, 510006, People's Republic of China
| | - Li Wc
- Department of Science and Environmental Studies, The Education University of Hong Kong, Hong Kong, SAR, People's Republic of China.
| | - Ye Zh
- School of Life Sciences, Sun Yat-sen University, Guangzhou, 510006, People's Republic of China.
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26
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Vezza ME, Olmos Nicotra MF, Agostini E, Talano MA. Biochemical and molecular characterization of arsenic response from Azospirillum brasilense Cd, a bacterial strain used as plant inoculant. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:2287-2300. [PMID: 31776908 DOI: 10.1007/s11356-019-06959-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2019] [Accepted: 11/04/2019] [Indexed: 06/10/2023]
Abstract
Azospirillum brasilense Cd is a bacterial strain widely used as an inoculant of several crops due to its plant growth promoting properties. However, its beneficial effects depend on its viability and functionality under adverse environmental conditions, including the presence of arsenic (As) in agricultural soils. Therefore, the aim of this work was to evaluate the response of A. brasilense Cd to arsenate (AsV) and arsenite (AsIII). This bacterium was tolerant to As concentrations frequently found in soils. Moreover, properties related to roots colonization (motility, biofilm, and exopolymers) and plant growth promotion (auxin, siderophore production, and N2 fixation) were not significantly affected by the metalloid. In order to deepen the understanding on As responses of A. brasilense Cd, As resistance genes were sequenced and characterized for the first time in this work. These genes could mediate the redox As transformation and its extrusion outside the cell, so they could have direct association with the As tolerance observed. In addition, its As oxidation/reduction capacity could contribute to change the AsV/AsIII ratio in the environment. In conclusion, the results allowed to elucidate the As response of A. brasilense Cd and generate interest for its potential use in polluted environments.
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Affiliation(s)
- Mariana Elisa Vezza
- Departamento de Biología Molecular, FCEFQyN, Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, 5800, Río Cuarto, Córdoba, Argentina.
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.
| | - Maria Florencia Olmos Nicotra
- Departamento de Biología Molecular, FCEFQyN, Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, 5800, Río Cuarto, Córdoba, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| | - Elizabeth Agostini
- Departamento de Biología Molecular, FCEFQyN, Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, 5800, Río Cuarto, Córdoba, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| | - Melina Andrea Talano
- Departamento de Biología Molecular, FCEFQyN, Universidad Nacional de Río Cuarto (UNRC), Ruta Nacional 36 Km 601, 5800, Río Cuarto, Córdoba, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
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27
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Amelioration effect of chromium-tolerant bacteria on growth, physiological properties and chromium mobilization in chickpea (Cicer arietinum) under chromium stress. Arch Microbiol 2020; 202:887-894. [PMID: 31893290 DOI: 10.1007/s00203-019-01801-1] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Revised: 12/13/2019] [Accepted: 12/17/2019] [Indexed: 02/03/2023]
Abstract
In this study, chromium (Cr)-tolerant bacteria were test for their efficiency in alleviating Cr stress in Cicer arietinum plants. On the basis of 16S rRNA gene analysis, the isolates were identified belonging to genus Stenotrophomonas maltophilia, Bacillus thuringiensis B. cereus, and B. subtilis. The strains produced a considerable amount of indole-3-acetic acid in a medium supplemented with tryptophan. The strains also showed siderophore production (S2VWR5 and S3VKR17), phosphorus production (S1VKR11, S3VKR2, S3VKR16, and S2VWR5), and potassium solubilization (S3VKR2, S2VWR5, and S3VKR17). Furthermore, the strains were evaluated in pot experiments to assess the growth promotion of C. arietinum in the presence of chromium salts. Bacterization improved higher root and shoot length considerably to 6.25%-60.41% and 11.3%-59.6% over the control. The plants also showed increase in their fresh weight and dry weight in response to inoculation with Cr-tolerant strains. The accumulation of Cr was higher in roots compared to shoots in both control and inoculated plants, indicating phytostabilization of Cr by C. arietinum. However, phytostabilization was found to be improved manifold in inoculated plants. Apart from the plant attributes, the amendment of soil with Cr and Cr-tolerant bacteria significantly increased the content of total chlorophyll and carotenoids, suggesting the inoculant's role in protecting plants from deleterious effects. This work suggests that the combined activity of Cr-tolerant and plant growth-promoting (PGP) properties of the tested strains could be exploited for bioremediation of Cr and to enhance the C. arietinum cultivation in Cr-contaminated soils.
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28
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Rahman Z, Thomas L, Singh VP. Study of As-resistant bacteria from Nadia, India and a survey of two As resistance-related proteins. J Basic Microbiol 2019; 60:47-57. [PMID: 31680284 DOI: 10.1002/jobm.201900373] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2019] [Revised: 09/30/2019] [Accepted: 10/11/2019] [Indexed: 11/07/2022]
Abstract
The present investigation deals with the characterisation of three As-resistant bacteria, Bacillus aryabhattai strain VPS1, Bacillus licheniformis strain VPS6 and Sporosarcina thermotolerans strain VPS7 isolated from the rhizosphere of a contaminated paddy field in Chakdaha, Nadia, West Bengal, India. Two strains, VPS6 and VPS7 showed ureolytic activity, which can be used for microbial-induced calcite precipitation of As as a bioremediation option. However, As reduction and oxidation capacities were not reported in any of these bacteria. A phylogenetic tree of 16S ribosomal RNA gene sequences was constructed for all three bacterial isolates, including different species of As-resistant Bacillus and Sporosarcina. Furthermore, literature survey and genome mining were employed to explore the diversity of As resistance-related proteins, arsenite S-adenosylmethyltransferase (ArsM) and arsenical pump membrane protein (ArsB) among different bacteria, and the phylogenetic relatedness was studied to understand the distribution and evolution of their amino acid sequences. ArsB was predominantly present in a wide variety of bacteria (347 taxa); however, ArsM was reported in comparatively fewer isolates (109 taxa). There were a total of 60 similar taxa that contained both ArsM and ArsB. Both proteins were most abundantly present in phylum Proteobacteria. Overall, this investigation enumerates As-resistant bacteria to understand the As metabolism in the environment, and the phylogenetic analysis of As resistance-related proteins helps in understanding the functional relationship in different bacteria for their role in As mobility in the environment.
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Affiliation(s)
- Zeeshanur Rahman
- Department of Botany, Zakir Husain Delhi College, University of Delhi, Delhi, India.,Department of Botany, University of Delhi, Delhi, India
| | - Lebin Thomas
- Department of Botany, University of Delhi, Delhi, India.,Department of Botany, Hansraj College, University of Delhi, Delhi, India
| | - Ved P Singh
- Department of Botany, University of Delhi, Delhi, India
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29
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Armendariz AL, Talano MA, Olmos Nicotra MF, Escudero L, Breser ML, Porporatto C, Agostini E. Impact of double inoculation with Bradyrhizobium japonicum E109 and Azospirillum brasilense Az39 on soybean plants grown under arsenic stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2019; 138:26-35. [PMID: 30831360 DOI: 10.1016/j.plaphy.2019.02.018] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2019] [Revised: 02/14/2019] [Accepted: 02/19/2019] [Indexed: 06/09/2023]
Abstract
Inoculation practice with plant growth-promoting bacteria (PGPB) has been proposed as a good biotechnological tool to enhance plant performance and alleviate heavy metal/metalloid stress. Soybean is often cultivated in soil with high arsenic (As) content or irrigated with As-contaminated groundwater, which causes deleterious effects on its growth and yield, even when it was inoculated with rhizobium. Thus, the effect of double inoculation with known PGPB strains, Bradyrhizobium japonicum E109 and Azospirillum brasilense Az39 was evaluated in plants grown in pots under controlled conditions and treated with As. First, the viability of these co-cultivated bacteria was assayed using a flow cytometry analysis using SYTO9 and propidium iodide (PI) dyes. This was performed in vitro to evaluate the bacterial population dynamic under 25 μM AsV and AsIII treatment. A synergistic effect was observed when bacteria were co-cultured, since mortality diminished, compared to each growing alone. Indole acetic acid (IAA) produced by A. brasilense Az39 would be one of the main components involved in B. japonicum E109 mortality reduction, mainly under AsIII treatment. Regarding in vivo assays, under As stress, plant growth improvement, nodule number and N content increase were observed in double inoculated plants. Furthermore, double inoculation strategy reduced As translocation to aerial parts thus improving As phytostabilization potential of soybean plants. These results suggest that double inoculation with B. japonicum E109 and A. brasilense Az39 could be a safe and advantageous practice to improve growth and yield of soybean exposed to As, accompanied by an important metalloid phytostabilization.
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Affiliation(s)
- Ana L Armendariz
- Molecular Biology Department, Faculty of Exact, Physical, Chemical and Natural Sciences, National University of Río Cuarto, Ruta Nacional 36 Km 601, CP 5800, Río Cuarto, Córdoba, Argentina.
| | - Melina A Talano
- Molecular Biology Department, Faculty of Exact, Physical, Chemical and Natural Sciences, National University of Río Cuarto, Ruta Nacional 36 Km 601, CP 5800, Río Cuarto, Córdoba, Argentina.
| | - María Florencia Olmos Nicotra
- Molecular Biology Department, Faculty of Exact, Physical, Chemical and Natural Sciences, National University of Río Cuarto, Ruta Nacional 36 Km 601, CP 5800, Río Cuarto, Córdoba, Argentina.
| | - Leticia Escudero
- Laboratory of Analytical Chemistry for Research and Development (QUIANID), Interdisciplinary Institute of Basic Sciences (ICB), UNCUYO-CONICET, Faculty of Natural and Exact Sciences, National University of Cuyo, Padre J. Contreras 1300, CP 5500, Mendoza, Argentina.
| | - María Laura Breser
- Research and Transference Center of Villa María (CITVM-CONICET), National University of Villa María, Arturo Jauretche 1555, CP 5900, Villa María, Córdoba, Argentina.
| | - Carina Porporatto
- Research and Transference Center of Villa María (CITVM-CONICET), National University of Villa María, Arturo Jauretche 1555, CP 5900, Villa María, Córdoba, Argentina.
| | - Elizabeth Agostini
- Molecular Biology Department, Faculty of Exact, Physical, Chemical and Natural Sciences, National University of Río Cuarto, Ruta Nacional 36 Km 601, CP 5800, Río Cuarto, Córdoba, Argentina.
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Rathod J, Dhanani AS, Jean JS, Jiang WT. The whole genome insight on condition-specific redox activity and arsenopyrite interaction promoting As-mobilization by strain Lysinibacillus sp. B2A1. JOURNAL OF HAZARDOUS MATERIALS 2019; 364:671-681. [PMID: 30399550 DOI: 10.1016/j.jhazmat.2018.10.042] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2018] [Revised: 09/21/2018] [Accepted: 10/14/2018] [Indexed: 06/08/2023]
Abstract
A gram-positive spore former, Lysinibacillus sp. B2A1 was isolated from a high arsenic containing groundwater of Beimen2A well, Chianan Plain area, Southwestern Taiwan. Noteworthy, in the subsurface-mimicking anoxic incubation with a Na-lactate amendment system, this isolate could interact with arsenic-source mineral arsenopyrite and enhance arsenic mobilization. Further, the isolate showed elevated levels of arsenic resistance, 200 mM and 7.5 mM for arsenate and arsenite, respectively. Lysinibacillus sp. B2A1 demonstrated condition-specific redox activities including salient oxic oxidation of arsenite and anoxic reduction of arsenate. The elevated rate of As(III) oxidation (Vmax = 0.13 μM min-1 per 106 cells, Km = 15.3 μM) under oxic conditions was potent. Correlating with stout persistence in an arsenic-rich niche, remarkably, the lesser toxic effects of arsenic ions on bacterial sporulation frequency and germination highlight this strain's ability to thrive under catastrophic conditions. Moreover, the whole genome analysis elucidated diverse metal redox/resistance genes that included a potential arsenite S-adenosylmethyltransferase capable of mitigating arsenite toxicity. Owing to its arsenic resistance, conditional redox activities and ability to interact with arsenic minerals leading to arsenic mobilization, the presence of such spore-forming strains could be a decisive indication towards arsenic mobilization in subsurface aquifers having a high concentration of soluble arsenic or its source minerals.
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Affiliation(s)
- Jagat Rathod
- Department of Earth Sciences, National Cheng Kung University, 1st University Road, Tainan, 70101, Taiwan
| | - Akhilesh S Dhanani
- Department of Pharmacology, Room 5-D, Tupper Medical Building,5850 College Street, Dalhousie University, Halifax, NS, B3H 4R2, Canada
| | - Jiin-Shuh Jean
- Department of Earth Sciences, National Cheng Kung University, 1st University Road, Tainan, 70101, Taiwan.
| | - Wei-Teh Jiang
- Department of Earth Sciences, National Cheng Kung University, 1st University Road, Tainan, 70101, Taiwan
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Zeng XC, He Z, Chen X, Cao QAD, Li H, Wang Y. Effects of arsenic on the biofilm formations of arsenite-oxidizing bacteria. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2018; 165:1-10. [PMID: 30173020 DOI: 10.1016/j.ecoenv.2018.08.079] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Revised: 08/20/2018] [Accepted: 08/21/2018] [Indexed: 06/08/2023]
Abstract
Arsenite-oxidizing bacteria (AOB) play a key role in the biogeochemical cycle of arsenic in the environment, and are used for the bioremediation of As contaminated groundwater; however, it is not yet known about how arsenic affects biofilm formations of AOB, and how biofilm formations affect bacterial arsenite-oxidizing activities. To address these issues, we isolated seven novel AOB strains from the arsenic-contaminated soils. They can completely oxidize 1.0 mM As(III) in 22-60 h. Their arsenite oxidase sequences show 43-99% identities to those of other known AOB. Strains Cug1, Cug2, Cug3, Cug4, and Cug6 are able to form biofilms with thickness of 15-95 µm, whereas Cug8 and Cug9 cannot form biofilms. It is interesting to see that arsenite inhibited the biofilm formations of heterotrophic AOB strains, but promoted the biofilm formations of autotrophic strains in a concentration-dependent manner. The arsenite-oxidizing rates of Cug1 and Cug4 biofilms are 31.6% and 27.6% lower than those of their suspension cultures, whereas the biofilm activities of other strains are similar to those of their suspension cultures. The biofilm formation significantly promoted the bacterial resistance to arsenic. This work is the first report on the complex correlations among environmental arsenic, bacterial biofilm formations and bacterial arsenite-oxidizing activities. The data highlight the diverse lifestyle of different AOB under arsenic stress, and provide essential knowledge for the screening of efficient AOB strains used for constructions of bioreactors.
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Affiliation(s)
- Xian-Chun Zeng
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China.
| | - Zhong He
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
| | - Xiaoming Chen
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
| | - Qian A D Cao
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
| | - Hao Li
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
| | - Yanxin Wang
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
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Ghosh PK, Maiti TK, Pramanik K, Ghosh SK, Mitra S, De TK. The role of arsenic resistant Bacillus aryabhattai MCC3374 in promotion of rice seedlings growth and alleviation of arsenic phytotoxicity. CHEMOSPHERE 2018; 211:407-419. [PMID: 30077937 DOI: 10.1016/j.chemosphere.2018.07.148] [Citation(s) in RCA: 64] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Revised: 07/23/2018] [Accepted: 07/24/2018] [Indexed: 06/08/2023]
Abstract
The biological agents have been utilized as an affordable alternative to conventional costly metal remediation technologies for last few years. The present investigation introduces arsenic (As) resistant plant growth promoting rhizobacteria (PGPR) isolated from the As-contaminated agricultural field of West Bengal, India that alleviates arsenic-induced toxicity and exhibited many plant growth promoting traits (PGP). The isolated strain designated as AS6 has identified as Bacillus aryabhattai based on phenotypic characteristics, physio-biochemical tests, MALDI-TOFMS bio-typing, FAME analysis and 16S rDNA sequence homology. The strain found to exhibit five times more resistance to arsenate than arsenite with minimum inhibitory concentrations (MIC) being 100 mM and 20 mM respectively. The result showed that accumulation of As was evidenced by SEM- EDAX, TEM-EDAX studies. The intracellular accumulation of arsenic was also confirmed as in bacterial biomass by AAS, FTIR, XRD and XRF analyses. The increased rate of As (V) reduction by this strain found to be exploited for the remediation of arsenic in the contaminated agricultural field. The strain also found to exhibit important PGP traits viz., ACC deaminase activity (2022 nmol α-ketobutyrate/mg protein/h), IAA production (166 μg/ml), N2 fixation (0.32 μgN fixed/h/mg proteins) and siderophore production (72%) etc. Positive influenced of AS6 strain on rice seedlings growth promotion under As stress was observed considering the several morphological, biochemical parameters including antioxidants activities as compared with an uninoculated set. Thus this strain might be exploited for stress amelioration and plant growth enhancement of rice cultivar under arsenic spiked agricultural soil.
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Affiliation(s)
- Pallab Kumar Ghosh
- Department of Marine Science, Ballygunge Science College Campus, Calcutta University, 35, B.C.Road, Kolkata, 700019, India.
| | - Tushar Kanti Maiti
- Microbiology Laboratory, CAS, Department of Botany, Burdwan University, Burdwan, Pin. 713104, WB, India
| | - Krishnendu Pramanik
- Microbiology Laboratory, CAS, Department of Botany, Burdwan University, Burdwan, Pin. 713104, WB, India
| | - Sudip Kumar Ghosh
- Microbiology Laboratory, CAS, Department of Botany, Burdwan University, Burdwan, Pin. 713104, WB, India
| | - Soumik Mitra
- Microbiology Laboratory, CAS, Department of Botany, Burdwan University, Burdwan, Pin. 713104, WB, India
| | - Tarun Kumar De
- Department of Marine Science, Ballygunge Science College Campus, Calcutta University, 35, B.C.Road, Kolkata, 700019, India
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Thongnok S, Siripornadulsil W, Siripornadulsil S. Mitigation of arsenic toxicity and accumulation in hydroponically grown rice seedlings by co-inoculation with arsenite-oxidizing and cadmium-tolerant bacteria. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2018; 162:591-602. [PMID: 30031320 DOI: 10.1016/j.ecoenv.2018.06.080] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2017] [Revised: 06/24/2018] [Accepted: 06/26/2018] [Indexed: 06/08/2023]
Abstract
Arsenic (As) contamination of rice grain is a serious problem worldwide. The objective of this study was to mitigate As toxicity and accumulation in hydroponically grown KDML105 rice seedlings using bacteria isolated from heavy metal-contaminated soils. Seven strains (KKU2500-1, -2, -3, -9, -12, -16 and -22) of 24 cadmium (Cd)-tolerant bacteria produced high levels of inorganic sulfide and thiol-rich compounds in As-supplemented media. The strains were allowed to colonize rice seedlings growing in arsenite [As(III)]- or arsenate [As(V)]-supplemented Hoagland's nutrient solutions. Colonization by strains KKU2500-3 and -12 led to increases in plant growth parameters and similarly reduced As translocation into shoots [translocation factor (TF) = 0.05] in the As(V)-supplemented solution. Strains KKU2500-1 and - 12 also greatly reduced As translocation into shoots (TF = 0.16-0.20) in As(III)-supplemented solution. KKU2500-3 and - 12 co-colonized onto seedlings with the As(III)-oxidizing isolates 4.25, 4.27, 4.40 and 4.44, and the strain combinations KKU2500-12/4.25, KKU2500-3/4.25, KKU2500-3/4.27 and KKU2500-3/4.44 resulted in higher growth parameters for plants grown in As [As(III)+As(V)]-supplemented solution than other combinations. Moreover, the combinations KKU2500-3/4.25 and KKU2500-3/4.44 greatly reduced As translocation (TF = 0.15 and 0.12, respectively), and this decreased As accumulation in shoots was significantly correlated with increased sulfide stimulation in roots and nutrient solution. These results indicate that these co-inoculated bacteria can mitigate As toxicity, translocation and accumulation in KDML105 seedlings and thus demonstrate synergistic activity in rice plants, and this effect can be further developed in field trials.
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Affiliation(s)
- Sarun Thongnok
- Department of Microbiology, Faculty of Science, Khon Kaen University, Khon Kaen, Thailand
| | - Wilailak Siripornadulsil
- Department of Microbiology, Faculty of Science, Khon Kaen University, Khon Kaen, Thailand; Research Center for Environmental and Hazardous Substance Management, Khon Kaen University, Khon Kaen, Thailand
| | - Surasak Siripornadulsil
- Department of Microbiology, Faculty of Science, Khon Kaen University, Khon Kaen, Thailand; Research Center for Environmental and Hazardous Substance Management, Khon Kaen University, Khon Kaen, Thailand; Salt-tolerant Rice Research Group, Khon Kaen University, Khon Kaen, Thailand.
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Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic speciation dynamics in paddy rice soil-water environment: sources, physico-chemical, and biological factors - A review. WATER RESEARCH 2018; 140:403-414. [PMID: 29775934 DOI: 10.1016/j.watres.2018.04.034] [Citation(s) in RCA: 162] [Impact Index Per Article: 27.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Revised: 03/13/2018] [Accepted: 04/14/2018] [Indexed: 06/08/2023]
Abstract
Rice is the main staple carbohydrate source for billions of people worldwide. Natural geogenic and anthropogenic sources has led to high arsenic (As) concentrations in rice grains. This is because As is highly bioavailable to rice roots under conditions in which rice is cultivated. A multifaceted and interdisciplinary understanding, both of short-term and long-term effects, are required to identify spatial and temporal changes in As contamination levels in paddy soil-water systems. During flooding, soil pore waters are elevated in inorganic As compared to dryland cultivation systems, as anaerobism results in poorly mobile As(V), being reduced to highly mobile As(III). The formation of iron (Fe) plaque on roots, availability of metal (hydro)oxides (Fe and Mn), organic matter, clay mineralogy and competing ions and compounds (PO43- and Si(OH)4) are all known to influence As(V) and As(III) mobility in paddy soil-water environments. Microorganisms play a key role in As transformation through oxidation/reduction, and methylation/volatilization reactions, but transformation kinetics are poorly understood. Scientific-based optimization of all biogeochemical parameters may help to significantly reduce the bioavailability of inorganic As.
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Affiliation(s)
- Prasanna Kumarathilaka
- School of Civil Engineering and Surveying, Faculty of Health, Engineering and Sciences, University of Southern Queensland, West Street, Toowoomba, Queensland, 4350, Australia
| | - Saman Seneweera
- Center for Crop Health, Faculty of Health, Engineering and Sciences, University of Southern Queensland, West Street, Toowoomba, Queensland, 4350, Australia
| | - Andrew Meharg
- Queen's University Belfast, Institute for Global Food Security, David Keir Building, Malone Road, Belfast, BT9 5BN, United Kingdom
| | - Jochen Bundschuh
- School of Civil Engineering and Surveying, Faculty of Health, Engineering and Sciences, University of Southern Queensland, West Street, Toowoomba, Queensland, 4350, Australia; UNESCO Chair on Groundwater Arsenic within the 2030 Agenda for Sustainable Development, University of Southern Queensland, West Street, Toowoomba, Queensland, 4350, Australia.
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Gwon HS, Khan MI, Alam MA, Das S, Kim PJ. Environmental risk assessment of steel-making slags and the potential use of LD slag in mitigating methane emissions and the grain arsenic level in rice (Oryza sativa L.). JOURNAL OF HAZARDOUS MATERIALS 2018; 353:236-243. [PMID: 29674098 DOI: 10.1016/j.jhazmat.2018.04.023] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2018] [Revised: 04/10/2018] [Accepted: 04/11/2018] [Indexed: 06/08/2023]
Abstract
Over the past decades, with increasing steel manufacturing, the huge amount of by-products (slags) generated need to be reused in an efficient way not only to reduce landfill slag sites but also for sustainable and eco-friendly agriculture. Our preliminary laboratory study revealed that compared to blast furnace slag, electric arc furnace slag and ladle furnace slag, the Linz-Donawitz converter (LD) slag markedly decreased CH4 production rate and increased microbial activity. In the greenhouse experiment, the LD slag amendment (2.0 Mg ha-1) significantly (p < 0.05) increased grain yield by 10.3-15.2%, reduced CH4 emissions by 17.8-24.0%, and decreased inorganic As concentrations in grain by 18.3-19.6%, compared to the unamended control. The increase in yield is attributed to the increased photosynthetic rates and increased availability of nutrients to the rice plant. Whereas, the decrease in CH4 emissions could be due to the higher Fe availability in the slag amended soil, which acted as an alternate electron acceptor, thereby, suppressed CH4 emissions. The more Fe-plaque formation which could adsorb more As and the competitive inhibition of As uptake with higher availability of Si could be the reason for the decrease in As uptake by rice cultivated with LD slag amendment.
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Affiliation(s)
- Hyo Suk Gwon
- Division of Applied Life Science, Gyeongsang National University, Jinju, 660-701, Republic of Korea
| | - Muhammad Israr Khan
- Division of Applied Life Science, Gyeongsang National University, Jinju, 660-701, Republic of Korea
| | - Muhammad Ashraful Alam
- Division of Applied Life Science, Gyeongsang National University, Jinju, 660-701, Republic of Korea
| | - Suvendu Das
- Institute of Agriculture and Life Sciences, Gyeongsang National University, Jinju, 660-701, Republic of Korea.
| | - Pil Joo Kim
- Division of Applied Life Science, Gyeongsang National University, Jinju, 660-701, Republic of Korea; Institute of Agriculture and Life Sciences, Gyeongsang National University, Jinju, 660-701, Republic of Korea.
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Das J, Sarkar P. Remediation of arsenic in mung bean (Vigna radiata) with growth enhancement by unique arsenic-resistant bacterium Acinetobacter lwoffii. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 624:1106-1118. [PMID: 29625525 DOI: 10.1016/j.scitotenv.2017.12.157] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Revised: 12/07/2017] [Accepted: 12/14/2017] [Indexed: 05/10/2023]
Abstract
Arsenic, a carcinogenic and toxic contaminant of soil and water, affects human health adversely. During last few decades, it has been an important global environmental issue. Among several arsenic detoxification methods remediation using arsenic resistant microbes is proved to be environment-friendly and cost-effective. This study aimed to test the effects of arsenic utilizing bacterial strain Acinetobacter lwoffii (RJB-2) on arsenic uptake and growth of mung bean plants (Vigna radiata). RJB-2 exhibited tolerance up to 125mM of arsenic (V) and 50mM of arsenic (III). RJB-2 produced plant growth promoting substances e.g. indole acetic acid (IAA), siderophores, exopolysaccharide (EPS) and phosphate solubilization in the absence and in presence of arsenic. Pot experiments were used to scrutinize the role of RJB-2 on arsenic uptake and growth of mung bean plants grown in soil amended with 22.5mgkg-1 of sodium arsenate (Na2HAsO4·7H2O). RJB-2 could arrest arsenic uptake in just 7days and increase plant growth, number of plants per pot, chlorophyll and carotenoid content of the mung bean plants. RJB-2 formed biofilm and its root-association helped to abate arsenic uptake in mung bean. Confocal and light microscopic studies also revealed the abatement of arsenic uptake and increase in chlorophyll content in mung bean plants in presence of RJB-2. RJB-2 was also responsible for less production of reactive oxygen species (ROS) in mung bean plants reducing the oxidative damage caused by arsenic. The lower percentage of electrolytic leakage (EL) in RJB-2 inoculated mung bean plants proved arsenic abatement. The study also reported the distribution of arsenic in various parts of mung bean plant. RJB-2 owing to its intrinsic abilities of plant growth promotion even in presence of high concentrations of arsenic could inhibit arsenic uptake completely and therefore it could be used in large-scale cultivation for phytostabilization of plants.
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Affiliation(s)
- Joyati Das
- Biosensor Laboratory, Department of Polymer Science and Technology, University of Calcutta, 92, A.P.C. Road, Kolkata 700009, West Bengal, India
| | - Priyabrata Sarkar
- Biosensor Laboratory, Department of Polymer Science and Technology, University of Calcutta, 92, A.P.C. Road, Kolkata 700009, West Bengal, India; Department of Chemical Engineering, Calcutta Institute of Technology, Banitabla, Kolkata 711316, West Bengal, India.
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Characterization of As(III) oxidizing Achromobacter sp. strain N2: effects on arsenic toxicity and translocation in rice. ANN MICROBIOL 2018. [DOI: 10.1007/s13213-018-1338-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Román-Ponce B, Ramos-Garza J, Arroyo-Herrera I, Maldonado-Hernández J, Bahena-Osorio Y, Vásquez-Murrieta MS, Wang ET. Mechanism of arsenic resistance in endophytic bacteria isolated from endemic plant of mine tailings and their arsenophore production. Arch Microbiol 2018; 200:883-895. [PMID: 29476206 DOI: 10.1007/s00203-018-1495-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2017] [Revised: 01/25/2018] [Accepted: 02/15/2018] [Indexed: 10/18/2022]
Abstract
Arsenic contamination is an important environmental problem around the world since its high toxicity, and bacteria resist to this element serve as valuable resource for its bioremediation. Aiming at searching the arsenic-resistant bacteria and determining their resistant mechanism, a total of 27 strains isolated from roots of Prosopis laevigata and Spharealcea angustifolia grown in a heavy metal-contaminated region in Mexico were investigated. The minimum inhibitory concentration (MIC) and transformation abilities of arsenate (As5+) and arsenite (As3+), arsenophore synthesis, arsenate uptake, and cytoplasmatic arsenate reductase (arsC), and arsenite transporter (arsB) genes were studied for these strains. Based on these results and the 16S rDNA sequence analysis, these isolates were identified as arsenic-resistant endophytic bacteria (AREB) belonging to the genera Arthrobacter, Bacillus, Brevibacterium, Kocuria, Microbacterium, Micrococcus, Pseudomonas, and Staphylococcus. They could tolerate high concentrations of arsenic with MIC from 20 to > 100 mM for As5+ and 10-20 mM for As3+. Eleven isolates presented dual abilities of As5+ reduction and As3+ oxidation. As the most effective strains, Micrococcus luteus NE2E1 reduced 94% of the As5+ and Pseudomonas zhaodongensis NM2E7 oxidized 46% of As3+ under aerobic condition. About 70 and 44% of the test strains produced arsenophores to chelate As5+ and As3+, respectively. The AREB may absorb arsenate via the same receptor of phosphate uptake or via other way in some case. The cytoplasmic arsenate reductase and alternative arsenate reduction pathways exist in these AREB. Therefore, these AREB could be candidates for the bioremediation process.
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Affiliation(s)
- Brenda Román-Ponce
- Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prolongación Carpio y Plan de Ayala s/n, Col. Santo Tomás, Del. Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.,Departamento de Microbiología y Genética, Edificio Departamental, Lab. 214, Universidad de Salamanca, Campus Miguel de Unamuno, 37007, Salamanca, Spain
| | - Juan Ramos-Garza
- Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prolongación Carpio y Plan de Ayala s/n, Col. Santo Tomás, Del. Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.,Universidad del Valle de México, Campus Chapultepec, Laboratorio 305, Observatorio No. 400, Col. 16 de Septiembre, Del. Miguel Hidalgo, C.P. 11810, Mexico City, Mexico
| | - Ivan Arroyo-Herrera
- Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prolongación Carpio y Plan de Ayala s/n, Col. Santo Tomás, Del. Miguel Hidalgo, C.P. 11340, Mexico City, Mexico
| | - Jessica Maldonado-Hernández
- Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prolongación Carpio y Plan de Ayala s/n, Col. Santo Tomás, Del. Miguel Hidalgo, C.P. 11340, Mexico City, Mexico
| | - Yanelly Bahena-Osorio
- Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prolongación Carpio y Plan de Ayala s/n, Col. Santo Tomás, Del. Miguel Hidalgo, C.P. 11340, Mexico City, Mexico
| | - María Soledad Vásquez-Murrieta
- Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prolongación Carpio y Plan de Ayala s/n, Col. Santo Tomás, Del. Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.
| | - En Tao Wang
- Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prolongación Carpio y Plan de Ayala s/n, Col. Santo Tomás, Del. Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.
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Su S, Zeng X, Bai L, Williams PN, Wang Y, Zhang L, Wu C. Inoculating chlamydospores of Trichoderma asperellum SM-12F1 changes arsenic availability and enzyme activity in soils and improves water spinach growth. CHEMOSPHERE 2017; 175:497-504. [PMID: 28249191 DOI: 10.1016/j.chemosphere.2017.02.048] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2016] [Revised: 02/05/2017] [Accepted: 02/07/2017] [Indexed: 06/06/2023]
Abstract
Arsenic (As)-contaminated agricultural soils threaten crop yields and pose a human health risk. Augmentation of exogenous microorganisms exhibiting plant-growth promoting and As speciation changing shows potential to improve crop growth and change soil As availability. Trichoderma asperellum SM-12F1 exhibiting both traits was developed into chlamydospores to improve its persistence in contaminated soils. After inoculation, As availability and enzyme activity in two types of soils and the growth as well as As uptake of water spinach (Ipomoea aquatic Forsk.) were investigated. The results indicated that inoculation significantly improved water spinach growth in both soils. Inoculating chlamydospores at 5% significantly increased As concentration (139%), bioconcentration factor (150%), and translocation factor (150%) in water spinach grown in Chenzhou (CZ) soils, while no significant change for these in Shimen (SM) soils. Inoculating chlamydospores at 5% caused a significant increase (16%) of available As content in CZ soils, while a significant decrease (13%) in SM soils. Inoculation significantly caused As methylation in both soils, while significant As reduction merely observed in CZ soils. The differential changes in available As contents in both soils were attributed to the soil pH, As fractionations and speciation characteristics. Furthermore, Inoculating chlamydospores at 5% significantly improved the activities of β-glucosidase (155%), chitinase (211%), and phosphatase (108%) in SM soils, while significant decreases in β-glucosidase (81%), phosphatase (54%), aminopeptidase (60%), and catalase (67%) in CZ soils. Bioaugmentation and As availability change were responsible for this result. These observations will be helpful for the application of fungal chlamydospores in the future bioremediation.
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Affiliation(s)
- Shiming Su
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences/Key Laboratory of Agro-Environment, Ministry of Agriculture, Beijing, PR China.
| | - Xibai Zeng
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences/Key Laboratory of Agro-Environment, Ministry of Agriculture, Beijing, PR China.
| | - Lingyu Bai
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences/Key Laboratory of Agro-Environment, Ministry of Agriculture, Beijing, PR China
| | - Paul N Williams
- Institute for Global Food Security, Queen's University Belfast, Belfast BT9 5HN, United Kingdom
| | - Yanan Wang
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences/Key Laboratory of Agro-Environment, Ministry of Agriculture, Beijing, PR China
| | - Lili Zhang
- Shanghai Synchrotron Radiation Facility, Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai, PR China
| | - Cuixia Wu
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences/Key Laboratory of Agro-Environment, Ministry of Agriculture, Beijing, PR China
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Das S, Chou ML, Jean JS, Yang HJ, Kim PJ. Arsenic-enrichment enhanced root exudates and altered rhizosphere microbial communities and activities in hyperaccumulator Pteris vittata. JOURNAL OF HAZARDOUS MATERIALS 2017; 325:279-287. [PMID: 27940117 DOI: 10.1016/j.jhazmat.2016.12.006] [Citation(s) in RCA: 72] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2016] [Revised: 12/01/2016] [Accepted: 12/02/2016] [Indexed: 06/06/2023]
Abstract
Phytoremediation of arsenic (As)-contaminated soil by hyperaccumulator Pteris vittata is promising. A better understanding of the rhizosphere microbial dynamics that regulate As availability and plant growth is important to optimize the phytoremediation process. In this study, Illumina sequencing of 16S rRNA genes was applied to assess the rhizosphere microbial community structure of P. vittata. Microbial functionality was monitored by soil enzyme activities and MPN-PCR targeting genes of interest. Arsenic (100mgkg-1 AsV) addition to soil significantly increased DOC, root exudates, As and P uptake and the frond biomass of P. vittata. Moreover, As-enrichment significantly increased soil enzyme activities involved in N, P and S cycling and the gene abundance of As transforming bacteria, Fe- and S-reducing bacteria and N and C fixing bacteria in the rhizosphere of P. vittata. Together, the results revealed that the combined selective pressure of As and rhizosphere resulted in stimulation of microbial community, which most likely has a role in reductive dissolution of Fe and S, As and P mobilization, C degradation and fixation, and N fixation. These changes appeared to have a role in mitigation of As toxicity and to promote growth and the As uptake ability of P. vittata under As-enriched conditions.
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Affiliation(s)
- Suvendu Das
- Department of Earth Sciences, National Cheng Kung University, Tainan 70101, Taiwan; Institute of Agricultural Science and Life Science, Gyeongsang National University, Jinju 660-701, Republic of Korea
| | - Mon-Lin Chou
- Department of Earth Sciences, National Cheng Kung University, Tainan 70101, Taiwan
| | - Jiin-Shuh Jean
- Department of Earth Sciences, National Cheng Kung University, Tainan 70101, Taiwan.
| | - Huai-Jen Yang
- Department of Earth Sciences, National Cheng Kung University, Tainan 70101, Taiwan
| | - Pil Joo Kim
- Institute of Agricultural Science and Life Science, Gyeongsang National University, Jinju 660-701, Republic of Korea
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Ricci A, Allende A, Bolton D, Chemaly M, Davies R, Girones R, Herman L, Koutsoumanis K, Lindqvist R, Nørrung B, Robertson L, Ru G, Sanaa M, Simmons M, Skandamis P, Snary E, Speybroeck N, Ter Kuile B, Threlfall J, Wahlström H, Cocconcelli PS, Klein G, Prieto Maradona M, Querol A, Peixe L, Suarez JE, Sundh I, Vlak JM, Aguilera-Gómez M, Barizzone F, Brozzi R, Correia S, Heng L, Istace F, Lythgo C, Fernández Escámez PS. Scientific Opinion on the update of the list of QPS-recommended biological agents intentionally added to food or feed as notified to EFSA. EFSA J 2017; 15:e04664. [PMID: 32625421 PMCID: PMC7010101 DOI: 10.2903/j.efsa.2017.4664] [Citation(s) in RCA: 87] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
EFSA is requested to assess the safety of a broad range of biological agents in the context of notification for market authorisation as sources of food and feed additives, food enzymes and plant protection products. The qualified presumption of safety (QPS) assessment was developed to provide a harmonised generic pre-assessment to support safety risk assessments performed by EFSA's scientific Panels. The safety of unambiguously defined biological agents (at the highest taxonomic unit appropriate for the purpose for which an application is intended), and the completeness of the body of knowledge are assessed. Identified safety concerns for a taxonomic unit are, where possible and reasonable in number, reflected as 'qualifications' in connection with a recommendation for a QPS status. The list of QPS recommended biological agents was reviewed and updated in the current opinion and therefore becomes the valid list. The 2016 update reviews previously assessed microorganisms including bacteria, yeasts and viruses used for plant protection purposes following an Extensive Literature Search strategy. The taxonomic units related to the new notifications received since the 2013 QPS opinion, were periodically evaluated for a QPS status and the results published as Statements of the BIOHAZ Panel. Carnobacterium divergens, Lactobacillus diolivorans, Microbacterium imperiale, Pasteuria nishizawae, Pediococcus parvulus, Bacillus flexus, Bacillus smithii, Xanthomonas campestris and Candida cylindracea were recommended for the QPS list. All taxonomic units previously recommended for the 2013 QPS list had their status reconfirmed as well their qualifications with the exception of Pasteuria nishizawae for which the qualification was removed. The exclusion of filamentous fungi and enterococci from the QPS evaluations was reconsidered but monitoring will be maintained and the status will be re-evaluated in the next QPS Opinion update. Evaluation of bacteriophages should remain as a case-by-case procedure and should not be considered for QPS status.
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Zhang F, Chen C, Zhang F, Gao L, Liu J, Chen L, Fan X, Liu C, Zhang K, He Y, Chen C, Ji X. Trichoderma harzianum containing 1-aminocyclopropane-1-carboxylate deaminase and chitinase improved growth and diminished adverse effect caused by Fusarium oxysporum in soybean. JOURNAL OF PLANT PHYSIOLOGY 2017; 210:84-94. [PMID: 28135657 DOI: 10.1016/j.jplph.2016.10.012] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2016] [Revised: 07/24/2016] [Accepted: 10/24/2016] [Indexed: 06/06/2023]
Abstract
An isolate, named Trichoderma harzianum T-soybean, showed growth-promoting for soybean seedlings and induced resistance to Fusarium oxysporum under greenhouse. Compared to control soybean seedlings, fresh weight, dry weight, lateral root number, chlorophyll content, root activity and soluble protein of plants pretreated with T-soybean increased, but initial pod height reduced. Furthermore, we found that T-soybean inhibited the growth of F. oxysporum by parasitic function. In addition, plate test results showed that culture filtrates of T-soybean also inhibited significantly F. oxysporum growth. Meanwhile, T-soybean treatment obviously reduced disease severity and induced quickly the H2O2 and O2- burst as well as pathogenesis related protein gene (PR3) expression after F. oxysporum inoculation, and subsequently diminished the cell damage in soybean caused by the pathogen challenge. Reactive oxygen species (ROS) scavenging enzymes activity analysis showed that the activities of peroxidase (POD), polyphenol oxidase (PPO) and superoxide dismutase (SOD) increased significantly in T-soybean pretreated plants. These results suggested that T-soybean treatment induced resistance in soybean seedlings to F. oxysporum by companying the production of ROS and the increasing of ROS scavenging enzymes activity as well as PR3 expression.
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Affiliation(s)
- Fuli Zhang
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China.
| | - Can Chen
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China
| | - Fan Zhang
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China
| | - Lidong Gao
- Henan Lotus Gourmet Powder Inc., XiangCheng 466200, China
| | - Jidong Liu
- Henan Lotus Gourmet Powder Inc., XiangCheng 466200, China
| | - Long Chen
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China.
| | - Xiaoning Fan
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China
| | - Chang Liu
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China
| | - Ke Zhang
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China
| | - Yuting He
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China
| | - Chen Chen
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China
| | - Xiue Ji
- College of Life Science and Agronomy, Zhoukou Normal University, Wenchangjie Dongduan, ZhouKou 466001, China
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Lakshmanan V, Cottone J, Bais HP. Killing Two Birds with One Stone: Natural Rice Rhizospheric Microbes Reduce Arsenic Uptake and Blast Infections in Rice. FRONTIERS IN PLANT SCIENCE 2016; 7:1514. [PMID: 27790229 PMCID: PMC5062539 DOI: 10.3389/fpls.2016.01514] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2016] [Accepted: 09/26/2016] [Indexed: 05/13/2023]
Abstract
Our recent work has shown that a rice thizospheric natural isolate, a Pantoea sp (hereafter EA106) attenuates Arsenic (As) uptake in rice. In parallel, yet another natural rice rhizospheric isolate, a Pseudomonas chlororaphis (hereafter EA105), was shown to inhibit rice blast pathogen Magnaporthe oryzae. Considering the above, we envisaged to evaluate the importance of mixed stress regime in rice plants subjected to both As toxicity and blast infections. Plants subjected to As regime showed increased susceptibility to blast infections compared to As-untreated plants. Rice blast pathogen M. oryzae showed significant resistance against As toxicity compared to other non-host fungal pathogens. Interestingly, plants treated with EA106 showed reduced susceptibility against blast infections in plants pre-treated with As. This data also corresponded with lower As uptake in plants primed with EA106. In addition, we also evaluated the expression of defense related genes in host plants subjected to As treatment. The data showed that plants primed with EA106 upregulated defense-related genes with or without As treatment. The data shows the first evidence of how rice plants cope with mixed stress regimes. Our work highlights the importance of natural association of plant microbiome which determines the efficacy of benign microbes to promote the development of beneficial traits in plants.
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Affiliation(s)
- Venkatachalam Lakshmanan
- Department of Plant and Soil Sciences, University of DelawareNewark, DE, USA
- Delaware Biotechnology InstituteNewark, DE, USA
| | - Jonathon Cottone
- Department of Plant and Soil Sciences, University of DelawareNewark, DE, USA
- Delaware Biotechnology InstituteNewark, DE, USA
| | - Harsh P. Bais
- Department of Plant and Soil Sciences, University of DelawareNewark, DE, USA
- Delaware Biotechnology InstituteNewark, DE, USA
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Update of the list of QPS‐recommended biological agents intentionally added to food or feed as notified to EFSA 4: suitability of taxonomic units notified to EFSA until March 2016. EFSA J 2016. [DOI: 10.2903/j.efsa.2016.4522] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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