Coupling electrokinetics with microbial biodegradation enhances the removal of cycloparaffinic hydrocarbons in soils

Microbial remediation of petroleum-contaminated soil focused on the mechanism and microbial response: a review

The environmental pollution caused by petroleum hydrocarbons has received considerable attention in recent years. Microbial remediation has emerged as the preferred method for the degradation of petroleum hydrocarbons, which is experiencing rapid development driven by advancements in molecular biology. Herein, the capacity of different microorganisms used for crude oil bioremediation was reviewed. Moreover, factors influencing the effectiveness of microbial remediation were discussed. Microbial remediation methods, such as bioaugmentation, biostimulation, and bioventilation, are summarized in this review. Aerobic and anaerobic degradation mechanisms were reviewed to elucidate the metabolic pathways involved. The impacts of petroleum hydrocarbons on microorganisms and the environment were also revealed. A brief overview of synthetic biology and a unique perspective of technique combinations were presented to provide insight into research trends. The challenges and future outlook were also presented to stimulate contemplation of the mechanisms involved and the development of innovative techniques.

The role of microorganisms in petroleum degradation: Current development and prospects

Petroleum hydrocarbon compounds are persistent organic pollutants, which can cause permanent damage to ecosystems due to their biomagnification. Bioremediation of oil is currently the main solution for the remediation of petroleum hydrocarbon pollutants in ecosystems. Despite several lab studies on oil microbial biodegradation efficiency, still there are various challenges for microorganisms to perform efficiently in outside environments. Herewith, investigating efficient biodegradation technologies through discovering new microorganisms, biodegradation pathways modification, and new bioremediations technologies are in great demand. The degradation of petroleum pollutants by microorganisms and the remediation of contaminated soils are achieved through their key enzymes and metabolic pathways. Although, several challenges hinder the effective biodegradation processes such as the toxic environment, long chains and versatility of petroleum hydrocarbons and the existence of the full metabolism pathways in a single microorganism. There are several developed oil biodegradation strategies by microorganisms such as synthetic biology, biofilm, recombinant technology and microbial consortia. Herewith, the application of multi-omics technology to discover oil-contaminated environments microbial communities, synthetic biology, microbial consortia, and other technologies would help improve the efficiency of microbial remediation.

Advanced remediation of pyrene contaminated soil by double dielectric barrier discharge (DDBD) plasma and subsequent composting process

Due to increasing industrialization, soils are increasingly contaminated by polycyclic aromatics such as pyrene and need gentle treatment to keep the soil functioning. This study applied a double dielectric barrier discharge (DDBD) plasma reactor and composting reactor to remediate pyrene-contaminated soil. The effect of peak-to-peak applied voltages on the remediation efficiency of pyrene was investigated. The experimental results illustrate that pyrene remediation efficiency increased from 43% to 85% when the peak-to-peak applied voltage was increased from 28.0 to 35.8 kV. When using the combined method of DDBD and composting, 90-99% of pyrene could be removed, while a reduction of 76.5% was achieved using only composting, indicating the superiority of the combined system. Moreover, the authors could demonstrate that DDBD plasma treatment improves humification in the post-composting process as humic acid (HA) concentrations increased to 7.7 mg/g with an applied voltage of 35.8 kV; when composting was used as the sole treatment method, only 3.4 mg/g HA were produced. The microbial activity in the DDBD plasma-treated soil peaked on the 5th day and had a 2nd rise afterwards. The authors demonstrate that the combined technology of DDBD plasma and composting is a promising method for soil remediation with persistent organic pollutants. This treatment approach improves pollutant degradation efficiency and facilitates further humification, potentially restoring the function of contaminated soil. This approach could be considered a cost-effective and green strategy for soil remediation with persistent organic pollutants.

PAEs Derivatives' Design for Insulation: Integrated In-Silico Methods, Functional Assessment and Environmentally Friendly Molecular Modification

As a common substance in production and life, phthalic acid esters (PAEs), the main component of plastics, have brought more and more serious problems to the environment. This study normalized the insulation, toxicity, and bioconcentration data of 13 PAEs to eliminate the dimensional coefficients of each index, and then used the comprehensive index method to calculate the comprehensive effect value of PAEs with three properties. The comprehensive effect value was used as the data source to construct the 3D-QSAR model of PAE molecular comprehensive effect. The DAP was selected as the target molecule, the distribution of each force field in the three-dimensional equipotential map was analyzed, and 30 molecular modification schemes were created. The constructed single-effect models of insulation, toxicity, and bioconcentration of PAEs and the scoring function module of DS software were used to evaluate the stability and environmental friendliness of PAE derivative molecules. Four PAE derivatives were screened for increased comprehensive effects, enhanced insulation, and reduced toxicity and bioconcentration. By calculating the binding energy of the target molecule and the derivative molecule with the degrading enzyme under different applied electric fields, it was found that the binding energy of DAP-1-NO2-2-CH2C6H5 decreases more than DAP does when there is an applied electric field, indicating that the degradation ability of degrading enzymes on PAE derivative molecules is reduced, which indirectly proves that the insulation is enhanced. The innovation of this paper lies in the insulation, toxicity, and bioenrichment data of PAEs being processed by mathematical method for the first time, and PAEs with high insulation, low toxicity, and low bioconcentration were designed by building a comprehensive model.

Improvement of the electrokinetic fluxes by tall fescue: Alleviation of ion attenuation and maintainability of soil colloidal properties

In this study, we aimed to address the attenuation of electrokinetic fluxes that occur during plant (tall fescue)-based electrokinetic remediation of oil-contaminated soil. Following 60 days of treatment, the concentration of water-soluble cations and anions in the electrokinetics-assisted phytoremediation treatment (EK-P) were 20.03 mg/kg and 15.7 mg/kg higher than that in the electrokinetic (EK) treatment, respectively. At the electrode, plants were able to alleviate the ion aggregation effect caused by the electrokinetics, reduce the conversion of soluble ions to insoluble ones, and reduce the decay of water-soluble ions. In addition, the zeta potential of EK-P was 5.05 mV lower than that of EK. Plants maintained the stability of the soil colloid and reduced the movement of the peak of colloidal particle size from small to large particles, thereby reducing the amount of colloidal deposition. Finally, the EK-P current was 22.49% higher than that in EK while the electrokinetic effect was maintained. Meanwhile, electrokinetics increased plant biomass by 20.21%. Electrokinetics was found to create a synergy with the plants, an effect that eventually enhanced the rate of oil degradation.

Mechanism of bio-electrokinetic remediation of pyrene contaminated soil: Effects of an electric field on the degradation pathway and microbial metabolic processes

In this study, the mechanism of bio-electrokinetic (BIO-EK) remediation to improve the degradation of pyrene was evaluated based on an analysis of the intermediate products and the microbial community. The results show that BIO-EK remediation has a higher pyrene degradation efficiency on pyrene and its intermediate products than the bioremediation and electrokinetic (EK) remediation processes. A series of intermediate products were detected. According to the type of the intermediate products, two degradation pathways, biological metabolism and electrochemical oxidation, are proposed in the BIO-EK remediation of pyrene. Furthermore, the primary microbial taxa involved in the pollutant degradation changed, which led to variations in the functional gene components. The abundant and functional genes related to metabolism were specifically analyzed. The results indicate that the electric field promotes the expression of metabolisms associated with 14 carbohydrates, 13 lipids, 13 amino acids, five energies, and in particular, 11 xenobiotics. These results suggest that in addition to the promotion effect on the microbial metabolism caused by the electric field, BIO-EK remediation can promote the degradation of pollutants due to the coexistence of a microbial metabolic pathway and an electrochemical oxidation pathway.

Alternating current enhanced bioremediation of petroleum hydrocarbon-contaminated soils

In this work, bioremediation was applied with sinusoidal alternating current (AC) electric fields to remove petroleum hydrocarbon (TPH) for soil remediation. Applying AC electric field with bioremediation (AC+BIO) could efficiently remove 31.6% of the TPH in 21 days, much faster than that in the BIO only system (13.7%) and AC only system (5.5%). When the operation time extended to 119 days, the AC+BIO system could remove 73.3% of the TPH. Applying AC electric field (20-200 V/m) could maintain the soil pH at neutral, superior to the direct current electric field. The maximum difference between soil temperature and the room temperature was 1.9 °C in the AC (50 V/m) +BIO system. The effects of AC voltage gradient (20-200 V/m) on the microorganisms and TPH degradation efficiency by AC+BIO were investigated, and the optimized AC voltage gradient was assessed as 50 V/m for lab-scale experiments. The microbial community structures in the BIO and AC+BIO systems were compared. Although Pseudomonas was the dominant species, Firmicutes became more abundant in the AC+BIO system than the BIO system, indicating their adaptive capacity to the stress of the AC electric field. Real petroleum-contaminated soil was used as a reaction matrix to evaluate the performance of AC+BIO in the field. The initial current density was about 0.2 mA/cm², voltage gradient was about 20 V/m, and the average TPH degradation rate was 8.1 μg/g_{dry soil} per day. This study provided insights and fundamental supports for the applications of AC+BIO to treat petroleum-polluted soils.

Bioremediation of polycyclic aromatic hydrocarbons contaminated soil under the superimposed electric field condition

An innovative superimposed electric field (SEF) was designed with the aim to achieve uniform removal of polycyclic aromatic hydrocarbons (PAHs) in soil. Also the influence of SEF on the bioremediation efficiency of PAHs was investigated in compared with the common electric field (CEF). Five experiments were conducted in this study, namely EK-CEF (applied CEF), EKB-CEF (CEF enhanced bioremediation), EK-SEF (applied SEF), EKB-SEF (SEF enhanced bioremediation), and Bio (bioremediation). The results indicated that electric field with periodically reversed polarity could effectively prevent the occurrence of large changes in soil pH, temperature, and electric current. The electric field intensity of SEF was concentrated in the range of 0.5-1.5 V/cm, and the difference between the maximum and minimum PAHs removal percentage in EK-SEF was just 5.4%, in comparison to 14.8% in EK-CEF. The bioremediation promoting effect did not show significant difference between SEF and CEF. Compared to Bio, the removal percentages of the 5-ring and 6-ring PAHs attributed to the degrading bacteria were much higher in EKB-SEF and EKB-CEF. Moreover, the microbial number increased with the distance away from electrodes, and the microbial community changed correspondingly. All these would be resulted in differences removal efficiencies among different PAHs components. Despite its intrinsic advantages, the influence of SEF on soil physicochemical and biological properties needs further study.

Desorbing of decabromodiphenyl ether in low permeability soil and the remediation potential of enhanced electrokinetic

In this study, desorption kinetic was determined for decabromodiphenyl ether (BDE209) in a low permeability soil, and the remediation potential of hydroxypropyl-β-cyclodextrin (HPCD) enhanced electrokinetic (EK) technique was investigated. The results indicated that the release rate of BDE209 in slowly and very slowly desorbing process was accounted for 31% and 68% in the whole desorption process, respectively. The final desorption rate of BDE209 was 20.7% after 70 h treatment with 5% HPCD in an ideal solution reaction system (without electric field). However, the removal efficiency of BDE209 in section S5 (near anode) of EK1 and EK2 had reached 22% and 20% after 14 days treatment, respectively. Thus it can be assumed that the interaction between BDE209 (on soil particles) and HPCD had been promoted under the electric field. A higher cumulative EOF did not remove more BDE209 with HPCD as facilitating agent, which might due to the low viscosity of HPCD and it did not react completely with BDE209 in soils. In addition, the removal efficiency of BDE209 in section S5 of CK1 and CK2 (without HPCD) had reached 6% and 10%, respectively, which might attribute to the desorption promoting effect of the uniform electric field on hydrophobic organic contaminants. In summary, it is feasible to use the EK to remove BDE209 in low permeability soils using HPCD as solubilizing agent, and the technique key is maintaining sufficient EOF and ensuring the contact reaction efficiency between HPCD and BDE209 synchronously.

Process-based modeling of electrokinetic-enhanced bioremediation of chlorinated ethenes

This study presents a process-based modeling analysis of electrokinetic-enhanced bioremediation (EK-Bio) to illuminate the complex interactions between physical, electrostatic and biogeochemical processes occurring during the application of this remediation technique. The features of the proposed model include: (i) multidimensional electrokinetic transport in saturated porous media by electromigration and electroosmosis, (ii) charge interactions, (iii) degradation kinetics, (iv) microbial populations dynamics of indigenous and specialized exogenous degraders, (v) mass transfer limitations, and (vi) geochemical reactions. A scenario modeling investigation is presented, which was inspired by an EK-Bio pilot application conducted in a clayey aquitard at the Skuldelev site (Denmark) contaminated by chlorinated ethenes. Lactate and specialized degraders are delivered under conservative and reactive transport conditions. In the considered setup, transport of lactate using electrokinetics results in more than fourfold increase in the distribution efficiency with respect to a diffusion-only scenario. Moreover, EK transport by electromigration and electroosmosis yields fluxes at least two orders of magnitude larger than diffusive fluxes. Quantitative metrics are also defined and used to assess the amendment distribution and the enhanced contaminant biodegradation in the different conservative and reactive transport scenarios.

Enhancement of electrokinetic-bioremediation by ryegrass: Sustainability of electrokinetic effect and improvement of n-hexadecane degradation

Phytoremediation-assisted electrokinetic-bioremediation is a novel technology for soil remediation. We aimed to study the effects of a plant (ryegrass) on electrokinetic-bioremediation in n-hexadecane-contaminated soil. After treatment for 40 days, the n-hexadecane degradation ratio of electrokinetic-bioremediation-ryegrass (EK-Bio-RG) was 4.86% higher than that of electrokinetic-bioremediation (EK-Bio) (p < 0.05), with a maximum constant degradation rate (107.23 ± 4.62 mg kg^-1· d^-1). Owing to the improved electrical conductivity, 73.28% of the initial current was maintained on the 40th day in EK-Bio-RG, which was 1.62 times that in EK-Bio. Furthermore, ryegrass reduced the soil zeta potential, which indicated the alleviation of the soil electric double layer compression and prevention of the aggregation of small soil colloids into larger ones. The fine colloidal structure was conducive to mass transfer in electrokinetic-bioremediation. An analysis of the microbial community showed that the degradation of n-hexadecane was mainly attributable to gram-positive bacteria, and a new microbial community was gradually constructed in the rhizosphere, which still metabolized n-hexadecane. The results indicated that the sustainability of the electrokinetic effect was improved combined with ryegrass, and the harmonious micro-environment in the rhizosphere was constructed which furtherly optimized the EK-Bio technology to remediate organics-polluted soil.

Change in soil ion content and soil water-holding capacity during electro-bioremediation of petroleum contaminated saline soil

This study investigated changes in soil ion content and soil water-holding capacity during electro-bioremediation (EK-Bio) of petroleum contaminated saline soil (ion content of 3.92 g/kg). The results indicated that the soil ions surrounded the electrodes with increasing time, thus changing the soil water-holding capacity. According to the Van Genuchten model fitting results, the soil residual water content (θr) increased with the soil ion content, which represented a capacity decrease of the soil water supply. At the end of the EK-Bio experiment, the θr values in the soil near (site A) and far from (site B) the electrodes were 19.1 % and 12.1 %, where the soil ion content was 7.92 g/kg and 0.55 g/kg, respectively. The ion aggregation process significantly impacted the growth of soil microbial. The bacteria numbers decreased when the soil ion content was high (7.41 g/kg, site A) and low (0.84 g/kg, site B) after 70 days of treatment. The applied electric field significantly enhanced the bioremediation efficiency. However, the biodegradation promotion effect was the weakest at site A. The synergistic effect between the applied electric field and degrading bacteria was delayed.

Kinetic modelling of total petroleum hydrocarbon in spent lubricating petroleum oil impacted soil under different treatments

The integration of first and second order kinetic model in parameter estimation for the degradation pattern of total petroleum hydrocarbon (TPH) in spent lubricating petroleum oil (SLPO) over a four-month period was the subject of the present investigation. Study design considered four treatment microcosms notably; sewage sludge (SB), monitored natural recovery (MNR), surfactant (SA) and control (SO). The rate of TPH degradation using sewage sludge as amendment material depicted effective TPH removal within ten weeks. A maximum allowable concentration of residual TPH (4300 mg kg^-1) was obtained through an amendment with sewage sludge. Degradation constant (k) produced by both first and second order rates significantly demonstrated the performance of sewage sludge biomass over the other three treatments applied, however, experimental data adequately fitted into the first order kinetics (k = 0.27 d^-1, t½ = 3.0 d). TPH removal efficiency of sewage sludge and detergent were 96.0% and 81.0% respectively. The use of sewage sludge biomass significantly (p < .05) improved soil biological characteristics and produced optimum dehydrogenase activity (DHA ≥ 8.8 TPFg^-1 d), germination index (%IG ≥ 88%), and chlorophyll content (chl ≥ 100 µg cm^-2), thus, recommended for field scale application in soil hydrocarbon pollution remediation.

Interactions between electrokinetics and rhizoremediation on the remediation of crude oil-contaminated soil

An electrokinetics (EK)-enhanced phytoremediation system with ryegrass was constructed to remediate crude oil-polluted soil. The four treatments employed in this study included (1) without EK or ryegrass (CK-NR), (2) EK only (EK-NR), (3) ryegrass only (CK-R), and (4) EK and ryegrass (EK-R). After 30d of ryegrass growth, EK at 1.0 V·cm^-1 with polarity reversal (PR-EK) was supplied for another 30 d. The electric current was recorded during remediation. The pH, electrical conductivity, total petroleum hydrocarbon content (TPH), 16S rDNA, functional genes of AlkB, Nah, and Phe, DGGE, and dehydrogenase activity in soil were measured. The physical-chemical indexes of the plant included the length, dry mass, and chlorophyll contents of the ryegrass. Results showed that EK-R removed 18.53 ± 0.53% of TPH, which was higher than that of other treatments (13.34-14.31%). Meanwhile, the values of 16S rDNA, AlkB, Nah, Phe, and dehydrogenase activity in the bulk soil of EK-R all increased. Further clustering analysis with numbers of genes and DGGE demonstrated that EK-R was similar to the ryegrass rhizosphere soils in both EK-R and CK-R, while the EK treatment of EK-NR was similar to that of CK-NR without EK and ryegrass. These results indicate that the PR-EK treatment used in this experiment successfully enlarged the existing scale of the rhizosphere microorganisms, improved microbial activity and enhanced degradation of TPH.

Novel Bacillus cereus strain from electrokinetically remediated saline soil towards the remediation of crude oil

A new strain SWH-15 was successfully isolated after initial electrokinetic remediation experiment using the same saline soil sampled from Shengli Oilfield, China. Four methods (morphological and biochemical characteristics, whole-cell fatty acid methyl esters (FAMEs) analysis, 16S rRNA sequence analysis and DNA G + C content and DNA-DNA hybridization analysis) were used to identify the taxonomic status of SWH-15 and confirmed that SWH-15 was a novel species of the Bacillus (B.) cereus group. Then, we assessed the degrading ability of the novel strain SWH-15 to crude oil through a microcosm experiment with four treatments, including control (CK), bioremediation using SWH-15 (Bio), electrokinetic remediation (EK), and combined bioremediation and electrokinetic remediation (Bio + EK). The results showed that the Bio + EK combined remediation treatment was more effective than the CK, Bio, and EK treatments in degrading crude oil contaminants. Bioaugmentation, by addition of the strain SWH-15 had synergistic effect with EK in Bio + EK treatment. Bacterial community analysis showed that electrokinetic remediation alone significantly altered the bacterial community of the saline soil. The addition of the strain SWH-15 alone had a weak effect on the bacterial community. However, the strain SWH-15 boosted the growth of other bacterial species in the metabolic network and weakened the impact of electrical field on the whole bacterial community structure in the Bio + EK treatment.

Resistance of aerobic microorganisms and soil enzyme response to soil contamination with Ekodiesel Ultra fuel

This study determined the susceptibility of cultured soil microorganisms to the effects of Ekodiesel Ultra fuel (DO), to the enzymatic activity of soil and to soil contamination with PAHs. Studies into the effects of any type of oil products on reactions taking place in soil are necessary as particular fuels not only differ in the chemical composition of oil products but also in the composition of various fuel improvers and antimicrobial fuel additives. The subjects of the study included loamy sand and sandy loam which, in their natural state, have been classified into the soil subtype 3.1.1 Endocalcaric Cambisols. The soil was contaminated with the DO in amounts of 0, 5 and 10 cm³ kg^-1. Differences were noted in the resistance of particular groups or genera of microorganisms to DO contamination in loamy sand (LS) and sandy loam (SL). In loamy sand and sandy loam, the most resistant microorganisms were oligotrophic spore-forming bacteria. The resistance of microorganisms to DO contamination was greater in LS than in SL. It decreased with the duration of exposure of microorganisms to the effects of DO. The factor of impact (IF_DO) on the activity of particular enzymes varied. For dehydrogenases, urease, arylsulphatase and β-glucosidase, it had negative values, while for catalase, it had positive values and was close to 0 for acid phosphatase and alkaline phosphatase. However, in both soils, the noted index of biochemical activity of soil (BA) decreased with the increase in DO contamination. In addition, a positive correlation occurred between the degree of soil contamination and its PAH content.